View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13390_high_13 (Length: 238)
Name: NF13390_high_13
Description: NF13390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13390_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 33501541 - 33501713
Alignment:
| Q |
17 |
aaatgtgacttattggaatgatttcttgttgctataacagattgacaatgatcttggctccattgttgaaaagtgagcactcagaaaataaactgttgaa |
116 |
Q |
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| T |
33501541 |
aaatgtgacctattggaatgatttcttgttgctataacagattgacaatgatcttggctccattgttgaaaagtgagcactcagaaaataaactgttgaa |
33501640 |
T |
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| Q |
117 |
tctcatatggaaaggacattgccattttactgtagaatgatcgagatttaagaattatttatatttctttacc |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
33501641 |
tctcatatggaaaggacattgccattttactgtagaatggtcgagatttaagaattatttatatttctttacc |
33501713 |
T |
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