View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13390_low_10 (Length: 350)

Name: NF13390_low_10
Description: NF13390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13390_low_10
NF13390_low_10
[»] chr7 (8 HSPs)
chr7 (17-339)||(2978873-2979196)
chr7 (28-339)||(2964863-2965175)
chr7 (70-280)||(22334332-22334542)
chr7 (70-279)||(13708901-13709112)
chr7 (70-208)||(10924755-10924894)
chr7 (96-208)||(9455246-9455358)
chr7 (96-221)||(20347270-20347392)
chr7 (70-208)||(11082413-11082552)
[»] chr4 (7 HSPs)
chr4 (70-203)||(29438299-29438434)
chr4 (70-271)||(19899968-19900171)
chr4 (69-280)||(22120551-22120761)
chr4 (119-235)||(18778051-18778164)
chr4 (70-201)||(17183732-17183863)
chr4 (99-176)||(39133909-39133988)
chr4 (191-231)||(21078146-21078186)
[»] chr8 (7 HSPs)
chr8 (70-208)||(18789742-18789881)
chr8 (122-203)||(30544642-30544723)
chr8 (96-279)||(27084586-27084768)
chr8 (110-279)||(13581998-13582164)
chr8 (158-207)||(13574703-13574752)
chr8 (72-143)||(11438276-11438348)
chr8 (96-150)||(30847017-30847072)
[»] chr3 (6 HSPs)
chr3 (134-231)||(19285752-19285849)
chr3 (70-210)||(26386951-26387092)
chr3 (190-258)||(8115225-8115294)
chr3 (73-208)||(28730722-28730858)
chr3 (120-260)||(11475795-11475932)
chr3 (70-168)||(26298607-26298705)
[»] chr1 (9 HSPs)
chr1 (104-280)||(25778619-25778795)
chr1 (96-279)||(19256983-19257163)
chr1 (104-208)||(39428076-39428180)
chr1 (122-202)||(25132893-25132973)
chr1 (96-220)||(14744526-14744647)
chr1 (119-171)||(26654413-26654465)
chr1 (117-184)||(25731229-25731296)
chr1 (123-185)||(26853419-26853481)
chr1 (234-282)||(19092165-19092213)
[»] chr2 (2 HSPs)
chr2 (96-279)||(20518312-20518495)
chr2 (154-258)||(27917097-27917202)
[»] chr5 (7 HSPs)
chr5 (70-259)||(22642993-22643179)
chr5 (70-280)||(15692923-15693130)
chr5 (98-184)||(31340598-31340685)
chr5 (98-229)||(20695700-20695829)
chr5 (191-279)||(7741351-7741439)
chr5 (74-131)||(7742046-7742104)
chr5 (70-279)||(18281238-18281449)
[»] scaffold0186 (1 HSPs)
scaffold0186 (70-203)||(32849-32981)
[»] scaffold0280 (1 HSPs)
scaffold0280 (98-171)||(17168-17242)
[»] chr6 (3 HSPs)
chr6 (191-276)||(12967090-12967175)
chr6 (191-276)||(12969276-12969361)
chr6 (191-276)||(12971463-12971548)


Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 17 - 339
Target Start/End: Complemental strand, 2979196 - 2978873
Alignment:
Q  17 aaatatgagggatacacgactt-acactttggaactttggaaataactagtttgtataactcatcttaagggaacctcatattgtaactggttgaattaa 115  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2979196 aaatataagggatacacgactttacactttggagctttggaaataactagtttgtataagtcatcttaagggaacctcatattgtaactggttgaattaa 2979097  T
Q  116 ggggatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcataaactaataattaattgagt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2979096 ggggatattaaaataaaattccattgattcatcacggtgttatgttctactttctggaattcaaacataaggaaagtcataaactaataattaattgagt 2978997  T
Q  216 taattcaaacaaagacagaggggagattcaatgattccttaatcgtcattacacttctgaatcaaaaccttgcaaccattctcaatcttttcttttattt 315  Q
    ||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2978996 taattcaaacaaagacgaaggggagattcaatgattccttaatcatcattacacttctgaatcaaaaccttgcaatcattctcaatcttttcttttattt 2978897  T
Q  316 gtttttcaaataagttatgatgat 339  Q
    ||||||||||||||||||||||||    
T  2978896 gtttttcaaataagttatgatgat 2978873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 28 - 339
Target Start/End: Complemental strand, 2965175 - 2964863
Alignment:
Q  28 atacacgactt-acactttggaactttggaaataactagtttgtataactcatcttaagggaacctcatattgtaactggttgaattaaggggatattaa 126  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2965175 atacacgactttacactttggagctttggaaataactagtttgtataactcatcttaaaggaacctcatattgtaactggttgaattaaggggatattaa 2965076  T
Q  127 aataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcataaactaataattaattgagttaattcaaaca 226  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2965075 aataaaattctattgattcatcacgctgttatgttctactttcttgaattcaaacataaggatagtcataaactaataattaattgagttaattcaaaca 2964976  T
Q  227 aagacagaggggagattcaatgattccttaatcgtcattacacttctgaatcaaaaccttgcaaccattctcaatcttttcttttatttgtttttcaaat 326  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  2964975 aagacggaggggagattcaatgattccttaatcgtcattacacttctgaatcaaaaccttgcaaccattctcaatcttatcttctatttgttttccaaat 2964876  T
Q  327 aagttatgatgat 339  Q
    |||||||||||||    
T  2964875 aagttatgatgat 2964863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 70 - 280
Target Start/End: Complemental strand, 22334542 - 22334332
Alignment:
Q  70 tataactcatcttaagggaacctcatattgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactttc 169  Q
    |||| ||||||||||||||||| || ||||||||||||||||||   ||||||||||||||||  |||| | ||||||||  | |||| |||| ||||||    
T  22334542 tatacctcatcttaagggaaccccaaattgtaactggttgaattgctgggatattaaaataaaggtccactaattcatcatagggttaggttccactttc 22334443  T
Q  170 ttgaattcaaacataaggaaagtcataaactaataattaattgagttaattcaaacaaagacagaggggagattcaatgattccttaatcgtcattacac 269  Q
    || |||||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||| |||||| |||| || |||||| |||||  | |||| |    
T  22334442 ttaaattcaaacatagggaaagtcataaactaataattaatcgagttagttccaacaaagacggaggggggattaaaggattccctaatcaccgttactc 22334343  T
Q  270 ttctgaatcaa 280  Q
    || ||||||||    
T  22334342 ttttgaatcaa 22334332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 70 - 279
Target Start/End: Original strand, 13708901 - 13709112
Alignment:
Q  70 tataactcatcttaagggaacctcata-ttgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctacttt 168  Q
    |||||||||||||||||||||| || | |||||| || |||||||   |||||||||||||||| ||||  |||||||| |  |  ||||||||||||||    
T  13708901 tataactcatcttaagggaaccccagaattgtaaatgattgaattgcagggatattaaaataaacttcccctgattcataataggtttatgttctacttt 13709000  T
Q  169 cttgaattcaaacataaggaaagtcataaactaataattaattgagttaa-ttcaaacaaagacagaggggagattcaatgattccttaatcgtcattac 267  Q
    ||| ||| ||||||||||| ||||||||||||||||||||||  |||||| ||| |||||||||| || || ||||||| |||||| |||||||| ||||    
T  13709001 cttaaatccaaacataaggcaagtcataaactaataattaatccagttaatttccaacaaagacaaagaggggattcaaggattccctaatcgtcgttac 13709100  T
Q  268 acttctgaatca 279  Q
    ||||| ||||||    
T  13709101 acttccgaatca 13709112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 10924755 - 10924894
Alignment:
Q  70 tataactcatcttaagggaacctcata-ttgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctacttt 168  Q
    |||||||||||||||||||||| || | |||||| || |||||||   |||||||||||||||| ||||| | ||||||||||| |||||||| ||||||    
T  10924755 tataactcatcttaagggaaccccacaattgtaaatgattgaattgcagggatattaaaataaacttccactaattcatcacggagttatgttatacttt 10924854  T
Q  169 cttgaattcaaacataaggaaagtcataaactaataatta 208  Q
    ||| ||| ||||||||||  |||| |||||||||||||||    
T  10924855 cttaaatccaaacataagacaagttataaactaataatta 10924894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 9455358 - 9455246
Alignment:
Q  96 attgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcat 195  Q
    ||||||| ||||||||||  |||||||||| |||||| |||||||||||||||| || ||||||||||||||| || |||  |||||||||  |||| ||    
T  9455358 attgtaaatggttgaattgcggggatattagaataaacttccattgattcatcatggggttatgttctactttatttaatctaaacataagacaagttat 9455259  T
Q  196 aaactaataatta 208  Q
    |||| ||| ||||    
T  9455258 aaaccaatgatta 9455246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 20347270 - 20347392
Alignment:
Q  96 attgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcat 195  Q
    |||||||| |||||||||  || ||||||||||||||  |||| ||||| |||| || || ||||| ||||||||| ||| | ||   ||||||||||||    
T  20347270 attgtaaccggttgaattgcggcgatattaaaataaatgtccactgatttatcatggggtcatgttttactttcttaaatcctaa---aaggaaagtcat 20347366  T
Q  196 aaactaataattaattgagttaattc 221  Q
    ||||| | ||| ||| ||||||||||    
T  20347367 aaactgaaaatcaatcgagttaattc 20347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 11082413 - 11082552
Alignment:
Q  70 tataactcatcttaagggaacctcata-ttgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctacttt 168  Q
    |||||||| ||||||||||||| |  | ||| || || ||||| || |||| ||||||| |||| |||||   ||||||||  | |||||||||||||||    
T  11082413 tataactcgtcttaagggaaccccgcaattgcaaatgattgaactacggggttattaaagtaaacttccaccaattcatcatagagttatgttctacttt 11082512  T
Q  169 cttgaattcaaacataaggaaagtcataaactaataatta 208  Q
    ||| ||| ||||||||||  || | |||||| ||||||||    
T  11082513 cttaaatccaaacataagacaaattataaacgaataatta 11082552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 29438299 - 29438434
Alignment:
Q  70 tataactcatcttaagggaacctcata-ttgtaactggttgaattaaggggatattaaaataaaa-ttccattgattcatcacggtgttatgttctactt 167  Q
    |||||||||||||||||||||| || | |||||| |||||||||| ||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  29438299 tataactcatcttaagggaaccccacaattgtaagtggttgaattgaggggatgttaaaataaaacttccactgattcatcacggagttatgttctactt 29438398  T
Q  168 tcttgaattcaaacataaggaaagtcataaactaat 203  Q
    | || |||  |||||||||| |||| ||||||||||    
T  29438399 tattaaatctaaacataaggcaagttataaactaat 29438434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 70 - 271
Target Start/End: Original strand, 19899968 - 19900171
Alignment:
Q  70 tataactcatcttaagggaacctcata-ttgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctacttt 168  Q
    |||||||||||| ||||||||| |  | |||||| ||||||||||  |||||| |||||||||| ||||| ||| | |||   | |||||||||||||||    
T  19899968 tataactcatctaaagggaaccccgcaattgtaaatggttgaattgcggggattttaaaataaacttccactgaataatcgtagggttatgttctacttt 19900067  T
Q  169 cttgaattcaaacataaggaaagtcataaactaataattaattgagttaa-ttcaaacaaagacagaggggagattcaatgattccttaatcgtcattac 267  Q
    ||| ||| ||||||||||| |||| |||||  |||||| | | || |||| ||| |||||||||  ||||  ||||||| ||||||||||| ||| ||||    
T  19900068 cttaaatccaaacataaggtaagttataaagaaataatcactcgatttaatttccaacaaagacgaagggaggattcaaggattccttaattgtcgttac 19900167  T
Q  268 actt 271  Q
    ||||    
T  19900168 actt 19900171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 280
Target Start/End: Original strand, 22120551 - 22120761
Alignment:
Q  69 gtataactcatcttaagggaac-ctcatattgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactt 167  Q
    |||||||||||||||||||||| ||   ||||||||||||| ||||   | |||| |||| |||| ||||| |||||||||| ||  |||||||||| ||    
T  22120551 gtataactcatcttaagggaacactgcaattgtaactggttaaattgcagagataataaa-taaacttccactgattcatcaggggattatgttctaatt 22120649  T
Q  168 tcttgaattcaaacataaggaaagtcataaactaataattaatt-gagttaattcaaacaaagacagagg-ggagattcaatgattccttaatcgtcatt 265  Q
    |||| ||| |||| | |    ||||||||||||||||||| |   |||||||||| || ||||||||| | || |||| || |||||||||||||   ||    
T  22120650 tcttaaatccaaagaaac---aagtcataaactaataatttagcagagttaattccaataaagacagaagaggggatttaaggattccttaatcgatgtt 22120746  T
Q  266 acacttctgaatcaa 280  Q
    |||||||||||||||    
T  22120747 acacttctgaatcaa 22120761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 18778051 - 18778164
Alignment:
Q  119 gatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcataaactaataattaattgagttaa 218  Q
    |||||||||| ||| || || ||||| |||||   |||||||||||||||||| ||| ||||   |||  ||||||||||||||| |||||| ||||||     
T  18778051 gatattaaaacaaattttcactgatttatcacaaggttatgttctactttcttaaatccaaa---aagacaagtcataaactaattattaatcgagttag 18778147  T
Q  219 ttcaaacaaagacagag 235  Q
    ||  |||||||||||||    
T  18778148 tttcaacaaagacagag 18778164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 201
Target Start/End: Complemental strand, 17183863 - 17183732
Alignment:
Q  70 tataactcatcttaagggaacctcata-ttgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctacttt 168  Q
    ||||||||||||||||||||||| | | |||||| ||||||||||  |||||  |||||  ||| ||||| | |||||||||    ||||||||||||||    
T  17183863 tataactcatcttaagggaaccttacaattgtaa-tggttgaattgtggggacgttaaataaaacttccactaattcatcacatgtttatgttctacttt 17183765  T
Q  169 cttgaattcaaacataaggaaagtcataaacta 201  Q
    ||| ||| |||| |||||  |||| ||||||||    
T  17183764 cttaaatccaaaaataagacaagttataaacta 17183732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 39133988 - 39133909
Alignment:
Q  99 gtaactggttgaattaaggggatattaaaa-taaaa-ttccattgattcatcacggtgttatgttctactttcttgaatt 176  Q
    ||||||| |||||||| || |||||||||| ||||| ||| | |||||||||||| ||| ||||||||||||||| ||||    
T  39133988 gtaactgattgaattacggtgatattaaaaataaaacttcaactgattcatcacgatgtcatgttctactttcttaaatt 39133909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 21078146 - 21078186
Alignment:
Q  191 gtcataaactaataattaattgagttaattcaaacaaagac 231  Q
    |||||||||||||||| ||| |||||||||| |||||||||    
T  21078146 gtcataaactaataatcaatcgagttaattccaacaaagac 21078186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 18789742 - 18789881
Alignment:
Q  70 tataactcatcttaagggaacctcata-ttgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctacttt 168  Q
    |||||||||||||||||||||| || | |||||| || |||||||   |||||||||||||||| ||||| | ||||||||||| |||||||| ||||||    
T  18789742 tataactcatcttaagggaaccccacaattgtaaatgattgaattgcagggatattaaaataaacttccactaattcatcacggagttatgttatacttt 18789841  T
Q  169 cttgaattcaaacataaggaaagtcataaactaataatta 208  Q
    ||| ||| ||||||||||  |||| |||||||||||||||    
T  18789842 cttaaatccaaacataagacaagttataaactaataatta 18789881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 30544642 - 30544723
Alignment:
Q  122 attaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcataaactaat 203  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||||  ||| |||||||||| ||||| ||||||||||    
T  30544642 attaaaataaaatttcactgattcatcacggggttatgttctactttctcaaatccaaacataagaaaagttataaactaat 30544723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 279
Target Start/End: Complemental strand, 27084768 - 27084586
Alignment:
Q  96 attgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcat 195  Q
    |||| |||||||||||||  || ||| |||||||||| ||||| || || ||||| | || ||||||||||||||| ||| |||| | ||| || |||||    
T  27084768 attgcaactggttgaattgcggcgatgttaaaataaatttccactgctttatcacag-gtcatgttctactttcttaaatccaaaaaaaagcaa-gtcat 27084671  T
Q  196 aaactaataattaattgagttaattcaaacaaagacaga-ggggagattcaatgattccttaatcgtcattacacttctgaatca 279  Q
    |||||||||||  || ||| || ||| | |||||||||| |||| ||||||| ||||||||||||||| ||| || | |||||||    
T  27084670 aaactaataatcgatcgagatatttccatcaaagacagaaggggggattcaaggattccttaatcgtcgttatacctatgaatca 27084586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 279
Target Start/End: Complemental strand, 13582164 - 13581998
Alignment:
Q  110 aattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcataaactaataattaa 209  Q
    ||||| ||||||||||||| ||| ||||| |||||  ||| || ||||||| |||||||||| ||  |||||||| || |||| ||||||||| |||||     
T  13582164 aattacggggatattaaaacaaacttccactgatttgtcatggggttatgtcctactttcttaaacccaaacatatggcaagttataaactaacaattac 13582065  T
Q  210 ttgagttaa-ttcaaacaaagacagaggggagattcaatgattccttaatcgtcattacacttctgaatca 279  Q
    | || |||| ||| |||||||||  ||    ||||||| |||||  ||| |||| ||||||||||||||||    
T  13582064 tcgatttaatttccaacaaagacgaag----gattcaaggattctctaaacgtcgttacacttctgaatca 13581998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 13574752 - 13574703
Alignment:
Q  158 tgttctactttcttgaattcaaacataaggaaagtcataaactaataatt 207  Q
    |||||||||||||| ||| ||||||||||| |||| ||||||||||||||    
T  13574752 tgttctactttcttaaatccaaacataaggcaagttataaactaataatt 13574703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 11438276 - 11438348
Alignment:
Q  72 taactcatcttaagggaacctcata-ttgtaactggttgaattaaggggatattaaaataaaattccattgat 143  Q
    |||||||||||||||||||| || | |||||| ||||||||||   |||||||||||||||| ||||| ||||    
T  11438276 taactcatcttaagggaaccccaaaattgtaaatggttgaattgcagggatattaaaataaacttccactgat 11438348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 30847072 - 30847017
Alignment:
Q  96 attgtaactggttgaattaaggggatattaaaataaaa-ttccattgattcatcac 150  Q
    ||||||||||||||||||   | ||||||||||||||| |||||||||||||||||    
T  30847072 attgtaactggttgaattgtagcgatattaaaataaaacttccattgattcatcac 30847017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 19285752 - 19285849
Alignment:
Q  134 ttccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcataaactaataattaattgagttaattcaaacaaagac 231  Q
    ||||| |||||||||| || |||||||| ||||||||| ||| |||||||||||||||||| ||||||||||||||| || ||||||| |||||||||    
T  19285752 ttccactgattcatcatggagttatgttatactttcttaaatccaaacataaggaaagtcaaaaactaataattaatcgatttaattccaacaaagac 19285849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 26387092 - 26386951
Alignment:
Q  70 tataactcatcttaagggaacc-tcatattgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctacttt 168  Q
    |||||||||||||||| ||||| |  |||||||| ||||||||||   |||||||||||||||| ||||| ||||| |||| |  ||||||||| |||||    
T  26387092 tataactcatcttaagagaaccctgctattgtaaatggttgaattgcagggatattaaaataaacttccactgattaatcatgaggttatgttcaacttt 26386993  T
Q  169 cttgaattcaaacataaggaaagtcataaactaataattaat 210  Q
    ||| ||| || ||||||||||| |||||| ||||||||||||    
T  26386992 cttaaatccatacataaggaaaatcataagctaataattaat 26386951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 8115294 - 8115225
Alignment:
Q  190 agtcataaactaataattaattgagttaattcaaacaaagacag-aggggagattcaatgattccttaat 258  Q
    ||||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  8115294 agtcataaactaataattaaccgagttaactcaaacaaagacagtaggggagattcaatgattccctaat 8115225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 28730858 - 28730722
Alignment:
Q  73 aactcatcttaagggaacctcata-ttgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactttctt 171  Q
    ||||||||||||||||||| || | |||||| || |||||||  |||| |||||||||||| || ||   ||||||||  | ||||||||||||||||||    
T  28730858 aactcatcttaagggaaccccacaattgtaaatgattgaattgcggggttattaaaataaactttcacgaattcatcagagagttatgttctactttctt 28730759  T
Q  172 gaattcaaacataaggaaagtcataaactaataatta 208  Q
     ||| ||||||||||| || | |||||| ||| ||||    
T  28730758 aaatccaaacataaggcaaattataaacgaatcatta 28730722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 260
Target Start/End: Original strand, 11475795 - 11475932
Alignment:
Q  120 atattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcataaactaataattaattgagttaat 219  Q
    |||||||||||   |||||| |||| ||||||| || |||||| ||| |||| ||| ||||   |||  |||||||||||||||||  ||| ||||||||    
T  11475795 atattaaaatagctttccatcgatttatcacggggtcatgttcgactatcttaaatccaaa---aagacaagtcataaactaataaccaatcgagttaat 11475891  T
Q  220 tcaaacaaagacagaggggagattcaatgattccttaatcg 260  Q
    || |||||||||||| | | |||| ||||||||| ||||||    
T  11475892 tccaacaaagacagatgagggattaaatgattccctaatcg 11475932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 26298607 - 26298705
Alignment:
Q  70 tataactcatcttaagggaacctcat-attgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctacttt 168  Q
    ||||||||||||||||||||||   | | | ||| ||||||||||  ||||||||||||||||| ||| | ||| ||||||||| |||||||| ||||||    
T  26298607 tataactcatcttaagggaaccctgtcactataaatggttgaattgtggggatattaaaataaacttctaatga-tcatcacggggttatgttatacttt 26298705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 25778619 - 25778795
Alignment:
Q  104 tggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcataaactaat 203  Q
    ||||||||||   |||||| ||||||||| ||||| || |||||||||| ||||||||||||||| || ||| || ||||| |  |||||||||||||||    
T  25778619 tggttgaattgcagggataataaaataaacttccactggttcatcacggggttatgttctacttttttaaatccacacatatgacaagtcataaactaat 25778718  T
Q  204 aattaattgagttaatt-caaacaaagacagaggggagattcaatgattccttaatcgtcattacacttctgaatcaa 280  Q
    ||||||| ||||||||| | || ||| ||  ||||| ||||||| |||||  |||||||  |||||||||||||||||    
T  25778719 aattaatcgagttaatttccaataaatacgaagggg-gattcaaggattctgtaatcgttgttacacttctgaatcaa 25778795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 96 - 279
Target Start/End: Complemental strand, 19257163 - 19256983
Alignment:
Q  96 attgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcat 195  Q
    ||||||||||||||||||  ||  ||||||||||||| || || ||||| ||||||  |||||||||||||||||| ||| |||| ||  |  |||||||    
T  19257163 attgtaactggttgaattgcggcaatattaaaataaactttcaatgatttatcacgtggttatgttctactttcttaaatccaaaaat--gacaagtcat 19257066  T
Q  196 aaactaataattaattgagttaattcaaacaaagacagaggggagattcaatgattccttaatcgtcattacacttctgaatca 279  Q
    ||||||||||| |||  |||||| || ||||||||| || ||| | ||||| |||||| |||||||| |||||||||| |||||    
T  19257065 aaactaataatcaatctagttaaatccaacaaagacggaaggg-ggttcaaggattccataatcgtcgttacacttctaaatca 19256983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 39428180 - 39428076
Alignment:
Q  104 tggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcataaactaat 203  Q
    ||||||||||   |||||||||||||||| || || |||||||||| || ||||||||||| |||||| ||||||||||||||  |||| ||||||||||    
T  39428180 tggttgaattgcagggatattaaaataaactttcactgattcatcatggagttatgttctattttcttaaattcaaacataagtcaagttataaactaat 39428081  T
Q  204 aatta 208  Q
     ||||    
T  39428080 gatta 39428076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 25132973 - 25132893
Alignment:
Q  122 attaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcataaactaa 202  Q
    |||||||||||||| ||||||||||||| |  |||||||||||||||||| ||| ||||||||||  |||| |||||||||    
T  25132973 attaaaataaaatttcattgattcatcaggcggttatgttctactttcttaaatccaaacataagacaagttataaactaa 25132893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 14744647 - 14744526
Alignment:
Q  96 attgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcat 195  Q
    ||||||||||||||||||| |  |||||||||||||| || |  ||||| ||||||  || |||| ||||||| || ||| ||||   |||  |||||||    
T  14744647 attgtaactggttgaattacgacgatattaaaataaactttccctgatttatcacgaggtcatgtcctactttattaaatccaaa---aagacaagtcat 14744551  T
Q  196 aaactaataattaattgagttaatt 220  Q
    |||||||||||| || |||||||||    
T  14744550 aaactaataatttatcgagttaatt 14744526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 26654465 - 26654413
Alignment:
Q  119 gatattaaaataaaattccattgattcatcacggtgttatgttctactttctt 171  Q
    |||||||||||||| ||||| ||||||||||| | || |||||||||||||||    
T  26654465 gatattaaaataaacttccactgattcatcacagggtcatgttctactttctt 26654413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 25731229 - 25731296
Alignment:
Q  117 gggatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacata 184  Q
    |||||| ||||||||| ||||| || |||||||||| || |||||||||||| || ||| ||||||||    
T  25731229 gggataataaaataaacttccactggttcatcacggggtcatgttctacttttttaaatccaaacata 25731296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 26853481 - 26853419
Alignment:
Q  123 ttaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataa 185  Q
    |||||| ||| ||||| | ||||||||| | |||||||| ||||||||| |||||||||||||    
T  26853481 ttaaaacaaacttccactaattcatcacagggttatgttatactttcttaaattcaaacataa 26853419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 19092165 - 19092213
Alignment:
Q  234 aggggagattcaatgattccttaatcgtcattacacttctgaatcaaaa 282  Q
    |||||||||||||||||||| |||||||  ||| || ||||||||||||    
T  19092165 aggggagattcaatgattccctaatcgtagttaaacctctgaatcaaaa 19092213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 96 - 279
Target Start/End: Complemental strand, 20518495 - 20518312
Alignment:
Q  96 attgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcat 195  Q
    ||||||| ||||||||||   ||||| |||||||||| ||||| ||||||||||||| |||||||||||||||||| ||| ||||||| ||  |||| ||    
T  20518495 attgtaaatggttgaattgcagggatgttaaaataaacttccactgattcatcacgg-gttatgttctactttcttaaatccaaacatgagacaagttat 20518397  T
Q  196 aaactaataattaattgagttaa-ttcaaacaaagacagaggggagattcaatgattccttaatcgtcattacacttctgaatca 279  Q
    |||| ||| |||  |||| |||| ||| | ||||||   ||||| ||||||| |||||| |||||||| |||||||| |||||||    
T  20518396 aaaccaatgatttcttgatttaatttccagcaaagatgaaggggggattcaaggattccataatcgtcgttacacttatgaatca 20518312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 258
Target Start/End: Complemental strand, 27917202 - 27917097
Alignment:
Q  154 gttatgttctactttcttgaattcaaacataaggaaagtcataaactaataattaattgagttaa-ttcaaacaaagacagaggggagattcaatgattc 252  Q
    |||||||||||||||||| ||| |||| ||||||||||| |||||| ||| |||  || | |||| ||| |||||||||  || || ||||||| |||||    
T  27917202 gttatgttctactttcttaaatccaaagataaggaaagttataaacgaattatttcttaatttaatttccaacaaagacgtagaggggattcaaggattc 27917103  T
Q  253 cttaat 258  Q
    ||||||    
T  27917102 cttaat 27917097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 259
Target Start/End: Complemental strand, 22643179 - 22642993
Alignment:
Q  70 tataactcatcttaagggaacctcata-ttgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctacttt 168  Q
    ||||||||||||||||| || | || | |||||| ||||| ||||  | ||||||| ||||||| || ||  ||||||||||   |||||||||||||||    
T  22643179 tataactcatcttaaggaaatcccacaattgtaattggttaaattgcgaggatattgaaataaacttgcaacgattcatcacatggttatgttctacttt 22643080  T
Q  169 cttgaattcaaacataaggaaagtcataaactaataattaattgagttaattcaaacaaagacagaggggagattcaatgattccttaatc 259  Q
    ||| ||| |||   ||||| ||| |||||||||||||||||| || ||||||  ||||| ||  |||||| ||||||| ||||||||||||    
T  22643079 cttaaatccaa---taaggcaag-cataaactaataattaatcgaattaatttcaacaacgaaggaggggggattcaaggattccttaatc 22642993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 280
Target Start/End: Complemental strand, 15693130 - 15692923
Alignment:
Q  70 tataactcatcttaagggaacctcata-ttgtaactggttgaattaaggggatattaaaataaaa-ttccattgattcatcacggtgttatgttctactt 167  Q
    |||||||||||||||||||||  || | ||||||||| ||||||||    ||||||||||||||| || || ||||||||||||  |||||||| |  ||    
T  15693130 tataactcatcttaagggaacaacacaattgtaactgattgaattacatcgatattaaaataaaactttcactgattcatcacgaggttatgttttgatt 15693031  T
Q  168 tcttgaattcaaacataaggaaagtcataaactaataattaattgagttaattcaaacaaagacagaggggagattcaatgattccttaatcgtcattac 267  Q
     ||| |||  ||||| |    ||||||  ||||||||||||| |||| ||| ||||||||||||| | ||| ||||||| |||||| |||||||  | ||    
T  15693030 acttaaatctaaacagac---aagtca--aactaataattaactgagataactcaaacaaagacaaaagggggattcaaggattccctaatcgttgtaac 15692936  T
Q  268 acttctgaatcaa 280  Q
    |||| ||||||||    
T  15692935 acttatgaatcaa 15692923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 31340685 - 31340598
Alignment:
Q  98 tgtaactggttgaattaaggggatattaaaataaaa-ttccattgattcatcacggtgttatgttctactttcttgaattcaaacata 184  Q
    ||||||||||||||||  || ||||||||||||||| ||||| ||||||||||| | || ||||||||| ||||| |||| |||||||    
T  31340685 tgtaactggttgaattgcggtgatattaaaataaaatttccactgattcatcacagggtcatgttctacattcttaaattgaaacata 31340598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 229
Target Start/End: Original strand, 20695700 - 20695829
Alignment:
Q  98 tgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactttcttgaattcaaacataaggaaagtcataa 197  Q
    ||||||||||||||||  || ||| |||||||||| ||||||||||||||||    || || ||||||||| || ||| |||| | |   ||||||||||    
T  20695700 tgtaactggttgaattgcggtgattttaaaataaacttccattgattcatcatttggtcatcttctacttttttaaatccaaaaaga--caaagtcataa 20695797  T
Q  198 actaataattaattgagttaattcaaacaaag 229  Q
    |||||| || ||| |||||||||| |||||||    
T  20695798 actaatgatcaatcgagttaattccaacaaag 20695829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 7741439 - 7741351
Alignment:
Q  191 gtcataaactaataattaattgagttaattcaaacaaagacagaggggagattcaatgattccttaatcgtcattacacttctgaatca 279  Q
    |||||||||||||||| ||  ||||||| || |||||||||||| ||| ||||||| ||||   |||||| | ||| ||||||||||||    
T  7741439 gtcataaactaataatcaaccgagttaagtccaacaaagacagaagggggattcaaggattttgtaatcgacgttaaacttctgaatca 7741351  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 7742104 - 7742046
Alignment:
Q  74 actcatcttaagggaacctcata-ttgtaactggttgaattaaggggatattaaaataa 131  Q
    ||||||||||||||||| ||| | ||||||||||||||||| | | |||||||||||||    
T  7742104 actcatcttaagggaacgtcacaattgtaactggttgaattgatgcgatattaaaataa 7742046  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 279
Target Start/End: Complemental strand, 18281449 - 18281238
Alignment:
Q  70 tataactcatcttaagggaac--ctcatattgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctactt 167  Q
    |||||||||||||||| ||||  | || ||||||| ||||||||||  ||||| ||||||  | | ||||| | |||||||||   ||||||||||||||    
T  18281449 tataactcatcttaagagaactccgca-attgtaaatggttgaattgtggggacattaaataatacttccactaattcatcacatagttatgttctactt 18281351  T
Q  168 tcttgaattcaaacataaggaaagtcataaactaataattaattgagttaa-ttcaaacaaagacagaggggagattcaatgattccttaatcgtcatta 266  Q
    || | ||| ||||||||||  | || |||||||||| |||  |  | |||| ||| ||| |||||  ||||  ||||||| |||||| |||||||  |||    
T  18281350 tcctaaatccaaacataagacatgttataaactaatgatttctatatttaatttctaaccaagacgaagggaggattcaaggattccctaatcgttgtta 18281251  T
Q  267 cacttctgaatca 279  Q
    ||||||| |||||    
T  18281250 cacttctaaatca 18281238  T

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Target: scaffold0186 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 32981 - 32849
Alignment:
Q  70 tataactcatcttaagggaacctca-tattgtaactggttgaattaaggggatattaaaataaaattccattgattcatcacggtgttatgttctacttt 168  Q
    |||||||||| ||||||||||| ||  ||||||| ||||||||||  ||| | |||||| |||| || || | ||||||||  | |||||||| ||||||    
T  32981 tataactcattttaagggaaccccacaattgtaaatggttgaatt--gggaagattaaagtaaattttcacttattcatcattgagttatgttttacttt 32884  T
Q  169 cttgaattcaaacataaggaaagtcataaactaat 203  Q
    ||| ||| ||||||||||  |||| |||| |||||    
T  32883 cttaaatccaaacataagacaagttataacctaat 32849  T

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Target: scaffold0280 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 17168 - 17242
Alignment:
Q  98 tgtaactggttgaattaaggggatattaaaataaaa-ttccattgattcatcacggtgttatgttctactttctt 171  Q
    |||||||  ||||||| ||| ||||||||||||||| ||||| |||| |||||||| || || ||||||||||||    
T  17168 tgtaacttattgaattgaggcgatattaaaataaaacttccactgatacatcacggggtcatattctactttctt 17242  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 12967175 - 12967090
Alignment:
Q  191 gtcataaactaataattaattgagttaattcaaacaaagacagaggggagattcaatgattccttaatcgtcattacacttctgaa 276  Q
    |||||||||||||||||||  |||||||||| |||||| |  || ||| ||||||| |||||  ||||||  |||| |||||||||    
T  12967175 gtcataaactaataattaaccgagttaattccaacaaataatgaagggggattcaaggattctctaatcgcgattatacttctgaa 12967090  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 12969361 - 12969276
Alignment:
Q  191 gtcataaactaataattaattgagttaattcaaacaaagacagaggggagattcaatgattccttaatcgtcattacacttctgaa 276  Q
    |||||||||||||||||||  |||||||||| |||||| |  || ||| ||||||| |||||  ||||||  |||| |||||||||    
T  12969361 gtcataaactaataattaaccgagttaattccaacaaataatgaagggggattcaaggattctctaatcgcgattatacttctgaa 12969276  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 12971548 - 12971463
Alignment:
Q  191 gtcataaactaataattaattgagttaattcaaacaaagacagaggggagattcaatgattccttaatcgtcattacacttctgaa 276  Q
    |||||||||||||||| ||  |||||||||| |||||| |  || ||| ||||||| |||||  |||||| ||||| |||||||||    
T  12971548 gtcataaactaataatcaaccgagttaattccaacaaataaggaagggggattcaaggattctctaatcgccattatacttctgaa 12971463  T

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