View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13392_low_8 (Length: 403)

Name: NF13392_low_8
Description: NF13392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13392_low_8
NF13392_low_8
[»] chr3 (67 HSPs)
chr3 (4-184)||(24382555-24382735)
chr3 (36-176)||(33112882-33113022)
chr3 (32-156)||(23774455-23774579)
chr3 (36-180)||(33852377-33852518)
chr3 (32-184)||(48634161-48634310)
chr3 (60-184)||(2977050-2977174)
chr3 (52-184)||(41020715-41020847)
chr3 (36-184)||(18429973-18430121)
chr3 (36-176)||(31887148-31887288)
chr3 (36-184)||(45898079-45898222)
chr3 (36-183)||(23888475-23888617)
chr3 (233-302)||(24382784-24382853)
chr3 (36-184)||(45256922-45257065)
chr3 (311-388)||(4071362-4071439)
chr3 (60-141)||(54093011-54093092)
chr3 (324-388)||(46115564-46115628)
chr3 (324-388)||(46116231-46116295)
chr3 (231-302)||(18430160-18430231)
chr3 (235-302)||(33852563-33852630)
chr3 (231-302)||(45257109-45257180)
chr3 (334-388)||(34435346-34435400)
chr3 (338-388)||(50197397-50197447)
chr3 (235-300)||(48634047-48634112)
chr3 (231-302)||(23774315-23774386)
chr3 (326-388)||(25998510-25998572)
chr3 (324-388)||(1362384-1362448)
chr3 (324-388)||(6586809-6586872)
chr3 (235-299)||(33113074-33113138)
chr3 (324-388)||(38732690-38732753)
chr3 (324-388)||(40374007-40374070)
chr3 (324-388)||(43967210-43967274)
chr3 (324-388)||(46668878-46668941)
chr3 (325-388)||(8320797-8320860)
chr3 (325-388)||(36238551-36238614)
chr3 (141-184)||(51454059-51454102)
chr3 (338-388)||(8880082-8880132)
chr3 (60-118)||(26449018-26449076)
chr3 (338-388)||(30741205-30741255)
chr3 (338-388)||(42878472-42878522)
chr3 (338-388)||(50936428-50936478)
chr3 (233-302)||(51454137-51454206)
chr3 (344-388)||(30317316-30317360)
chr3 (324-388)||(32389613-32389676)
chr3 (324-388)||(35324304-35324367)
chr3 (348-388)||(36545320-36545360)
chr3 (348-388)||(36562954-36562994)
chr3 (324-388)||(36659641-36659704)
chr3 (324-388)||(36807461-36807524)
chr3 (236-288)||(45898271-45898323)
chr3 (345-388)||(35406280-35406323)
chr3 (324-386)||(443584-443646)
chr3 (249-299)||(1845951-1846001)
chr3 (236-302)||(23888666-23888732)
chr3 (248-302)||(31887358-31887412)
chr3 (338-388)||(32111054-32111103)
chr3 (338-388)||(41991009-41991059)
chr3 (338-388)||(51063562-51063612)
chr3 (79-184)||(1846065-1846170)
chr3 (347-388)||(7042400-7042441)
chr3 (324-365)||(7475258-7475299)
chr3 (339-388)||(55226854-55226903)
chr3 (336-364)||(5506534-5506562)
chr3 (336-388)||(25164911-25164963)
chr3 (329-365)||(44895209-44895245)
chr3 (344-388)||(48072709-48072753)
chr3 (348-388)||(50937626-50937666)
chr3 (348-388)||(54462798-54462838)
[»] chr7 (67 HSPs)
chr7 (32-184)||(40784626-40784778)
chr7 (36-184)||(33038502-33038650)
chr7 (36-184)||(46812279-46812427)
chr7 (41-184)||(2167753-2167896)
chr7 (36-184)||(23954085-23954233)
chr7 (41-184)||(38613744-38613887)
chr7 (61-184)||(8423002-8423125)
chr7 (61-184)||(35344011-35344134)
chr7 (311-388)||(21920272-21920349)
chr7 (55-176)||(27955657-27955777)
chr7 (43-184)||(47341396-47341534)
chr7 (36-141)||(46996404-46996512)
chr7 (231-302)||(47341571-47341642)
chr7 (236-302)||(40784510-40784576)
chr7 (324-388)||(44104055-44104119)
chr7 (324-388)||(46733148-46733211)
chr7 (236-302)||(33038691-33038757)
chr7 (338-388)||(46536802-46536852)
chr7 (64-157)||(23168392-23168485)
chr7 (343-388)||(33981644-33981689)
chr7 (323-388)||(48312890-48312955)
chr7 (324-388)||(9806092-9806155)
chr7 (324-388)||(31620043-31620106)
chr7 (324-388)||(35669865-35669928)
chr7 (324-388)||(40061691-40061754)
chr7 (324-388)||(41833175-41833238)
chr7 (329-388)||(34307664-34307722)
chr7 (338-388)||(4061314-4061364)
chr7 (338-388)||(37657612-37657661)
chr7 (338-388)||(39869514-39869563)
chr7 (326-368)||(46535956-46535998)
chr7 (236-302)||(46996596-46996662)
chr7 (343-388)||(27827441-27827486)
chr7 (343-388)||(28493601-28493646)
chr7 (343-388)||(31031328-31031373)
chr7 (311-368)||(35669138-35669195)
chr7 (343-388)||(38226103-38226148)
chr7 (323-388)||(42327483-42327548)
chr7 (323-388)||(43338325-43338390)
chr7 (343-388)||(44819260-44819305)
chr7 (343-388)||(46350172-46350217)
chr7 (344-388)||(30583223-30583266)
chr7 (324-388)||(31435773-31435836)
chr7 (344-388)||(42327081-42327125)
chr7 (324-388)||(42826554-42826618)
chr7 (344-388)||(46615001-46615045)
chr7 (329-388)||(31968977-31969035)
chr7 (329-388)||(42329155-42329213)
chr7 (338-388)||(6244553-6244603)
chr7 (248-302)||(23953969-23954023)
chr7 (338-388)||(29993426-29993476)
chr7 (338-388)||(43544263-43544313)
chr7 (338-388)||(46330341-46330391)
chr7 (339-388)||(25696585-25696634)
chr7 (347-388)||(43157972-43158013)
chr7 (339-388)||(47483379-47483428)
chr7 (344-388)||(585251-585295)
chr7 (235-299)||(2492493-2492557)
chr7 (324-388)||(3116389-3116453)
chr7 (324-388)||(18804828-18804891)
chr7 (336-388)||(21261906-21261958)
chr7 (324-388)||(25751730-25751794)
chr7 (348-388)||(31029947-31029986)
chr7 (348-388)||(36821327-36821367)
chr7 (324-388)||(43467507-43467570)
chr7 (344-388)||(44571445-44571489)
chr7 (332-364)||(46614784-46614816)
[»] chr1 (51 HSPs)
chr1 (36-176)||(18183646-18183786)
chr1 (36-182)||(6575448-6575594)
chr1 (311-388)||(44277452-44277529)
chr1 (36-184)||(35479668-35479816)
chr1 (52-184)||(47269168-47269300)
chr1 (36-184)||(42134759-42134907)
chr1 (36-163)||(45380679-45380806)
chr1 (52-184)||(36895229-36895356)
chr1 (90-183)||(27940889-27940982)
chr1 (36-184)||(44158066-44158211)
chr1 (36-180)||(31801916-31802055)
chr1 (36-183)||(46638509-46638651)
chr1 (231-302)||(45380873-45380944)
chr1 (326-388)||(2458426-2458488)
chr1 (233-301)||(33685140-33685208)
chr1 (231-302)||(42134646-42134717)
chr1 (334-388)||(31497177-31497231)
chr1 (233-302)||(44157597-44157665)
chr1 (324-388)||(3795460-3795523)
chr1 (324-388)||(12015359-12015423)
chr1 (338-388)||(4639485-4639535)
chr1 (338-388)||(30358757-30358807)
chr1 (326-388)||(38059195-38059257)
chr1 (324-388)||(9224378-9224441)
chr1 (324-388)||(14390956-14391019)
chr1 (235-302)||(18183837-18183904)
chr1 (341-388)||(35180371-35180417)
chr1 (338-388)||(31656905-31656954)
chr1 (338-388)||(36740200-36740250)
chr1 (338-388)||(39326289-39326339)
chr1 (236-302)||(46638701-46638767)
chr1 (338-388)||(50585573-50585623)
chr1 (311-368)||(5675320-5675377)
chr1 (339-388)||(25366318-25366367)
chr1 (324-388)||(4513576-4513639)
chr1 (242-302)||(6575354-6575414)
chr1 (324-388)||(38667722-38667785)
chr1 (324-388)||(39325014-39325077)
chr1 (341-388)||(33077120-33077167)
chr1 (322-373)||(39447950-39448000)
chr1 (329-388)||(42627737-42627795)
chr1 (236-302)||(36895404-36895470)
chr1 (343-388)||(1189476-1189521)
chr1 (343-388)||(3569734-3569779)
chr1 (36-85)||(33682925-33682974)
chr1 (233-302)||(35479867-35479936)
chr1 (344-388)||(11824271-11824315)
chr1 (344-388)||(27668201-27668244)
chr1 (336-364)||(34086767-34086795)
chr1 (344-388)||(40942418-40942462)
chr1 (348-388)||(45900822-45900862)
[»] chr8 (67 HSPs)
chr8 (32-184)||(42897465-42897617)
chr8 (36-184)||(32822641-32822789)
chr8 (32-184)||(37525719-37525868)
chr8 (60-157)||(8654804-8654901)
chr8 (62-184)||(38882517-38882639)
chr8 (81-184)||(462111-462214)
chr8 (311-388)||(11687278-11687355)
chr8 (36-184)||(31821687-31821830)
chr8 (36-184)||(33750086-33750229)
chr8 (61-135)||(31200873-31200947)
chr8 (232-302)||(37525913-37525983)
chr8 (324-388)||(45237266-45237330)
chr8 (336-379)||(38760309-38760352)
chr8 (233-303)||(1320780-1320850)
chr8 (233-303)||(8654662-8654732)
chr8 (60-158)||(9184694-9184792)
chr8 (338-388)||(35011124-35011174)
chr8 (338-388)||(35020968-35021018)
chr8 (324-388)||(12209350-12209413)
chr8 (324-388)||(12453778-12453841)
chr8 (324-388)||(31719378-31719442)
chr8 (324-388)||(34900265-34900329)
chr8 (324-388)||(35252540-35252604)
chr8 (55-158)||(11721481-11721584)
chr8 (231-302)||(42897663-42897734)
chr8 (338-388)||(40530176-40530226)
chr8 (339-388)||(34618442-34618491)
chr8 (343-388)||(45236301-45236346)
chr8 (324-388)||(18146878-18146941)
chr8 (324-388)||(39103671-39103734)
chr8 (324-388)||(41356816-41356879)
chr8 (233-302)||(462263-462330)
chr8 (338-388)||(25099585-25099635)
chr8 (338-388)||(38362561-38362611)
chr8 (338-388)||(38745453-38745503)
chr8 (338-388)||(39734706-39734756)
chr8 (323-388)||(5575267-5575332)
chr8 (343-388)||(17912010-17912055)
chr8 (233-302)||(32822524-32822593)
chr8 (339-388)||(35056788-35056837)
chr8 (235-302)||(33160041-33160108)
chr8 (344-388)||(35437298-35437342)
chr8 (344-388)||(40532574-40532617)
chr8 (344-388)||(43874506-43874549)
chr8 (325-388)||(20696711-20696773)
chr8 (141-184)||(33159952-33159995)
chr8 (329-388)||(43150780-43150838)
chr8 (338-388)||(285140-285190)
chr8 (338-388)||(630687-630737)
chr8 (338-388)||(816499-816549)
chr8 (338-388)||(3153808-3153858)
chr8 (344-386)||(17155382-17155424)
chr8 (236-302)||(33750278-33750344)
chr8 (338-388)||(35397384-35397434)
chr8 (338-388)||(45069313-45069362)
chr8 (95-182)||(1320886-1320970)
chr8 (339-388)||(5964724-5964773)
chr8 (343-388)||(24804005-24804050)
chr8 (233-302)||(31201034-31201103)
chr8 (343-388)||(41670274-41670319)
chr8 (344-388)||(4477117-4477160)
chr8 (348-388)||(14912452-14912492)
chr8 (336-372)||(21266372-21266408)
chr8 (324-368)||(25133721-25133765)
chr8 (324-368)||(29050674-29050718)
chr8 (344-388)||(36859939-36859983)
chr8 (348-388)||(43800151-43800191)
[»] chr5 (47 HSPs)
chr5 (32-184)||(38177784-38177936)
chr5 (32-184)||(38205008-38205160)
chr5 (36-184)||(35292083-35292231)
chr5 (68-184)||(32838236-32838352)
chr5 (36-184)||(35395609-35395752)
chr5 (52-183)||(18728320-18728446)
chr5 (51-184)||(43317784-43317908)
chr5 (61-176)||(32087801-32087911)
chr5 (36-179)||(33256683-33256821)
chr5 (324-388)||(2890433-2890497)
chr5 (326-388)||(3747172-3747234)
chr5 (326-388)||(5102171-5102233)
chr5 (338-388)||(15499355-15499405)
chr5 (236-302)||(18728496-18728562)
chr5 (338-388)||(29524694-29524744)
chr5 (338-388)||(37530075-37530125)
chr5 (343-388)||(15525034-15525079)
chr5 (324-388)||(11783557-11783621)
chr5 (325-388)||(12282325-12282388)
chr5 (325-388)||(12953184-12953247)
chr5 (338-388)||(6788943-6788993)
chr5 (338-388)||(13019542-13019591)
chr5 (338-388)||(27812383-27812433)
chr5 (236-302)||(32087678-32087744)
chr5 (338-388)||(42709999-42710049)
chr5 (343-388)||(34589253-34589298)
chr5 (233-302)||(35395495-35395564)
chr5 (343-388)||(36761834-36761879)
chr5 (324-376)||(4558963-4559015)
chr5 (348-388)||(7156816-7156856)
chr5 (344-388)||(20768368-20768411)
chr5 (344-388)||(23591353-23591397)
chr5 (348-388)||(24172061-24172101)
chr5 (328-388)||(41733643-41733703)
chr5 (322-388)||(5049550-5049616)
chr5 (318-388)||(7947912-7947981)
chr5 (343-388)||(16217678-16217723)
chr5 (339-388)||(25882067-25882116)
chr5 (233-302)||(38177984-38178053)
chr5 (233-302)||(38205208-38205277)
chr5 (336-364)||(11576120-11576148)
chr5 (344-388)||(12939099-12939143)
chr5 (348-388)||(35639489-35639529)
chr5 (329-373)||(39818617-39818661)
chr5 (336-364)||(41356788-41356816)
chr5 (235-287)||(43317953-43318005)
chr5 (324-388)||(43347827-43347891)
[»] chr4 (66 HSPs)
chr4 (36-184)||(27625070-27625218)
chr4 (37-184)||(35996343-35996490)
chr4 (47-176)||(4519656-4519785)
chr4 (52-184)||(51041645-51041777)
chr4 (37-184)||(2350208-2350355)
chr4 (52-184)||(10372388-10372520)
chr4 (36-183)||(44558188-44558335)
chr4 (52-184)||(10762861-10762993)
chr4 (61-184)||(44794481-44794604)
chr4 (311-388)||(24153214-24153291)
chr4 (311-388)||(21234168-21234245)
chr4 (36-184)||(2827683-2827826)
chr4 (232-302)||(51041821-51041891)
chr4 (234-302)||(35996227-35996295)
chr4 (338-388)||(52575494-52575544)
chr4 (233-289)||(2350395-2350451)
chr4 (329-388)||(45109111-45109170)
chr4 (338-388)||(19801192-19801242)
chr4 (343-388)||(49647918-49647963)
chr4 (324-388)||(19914111-19914174)
chr4 (324-388)||(20530500-20530564)
chr4 (324-388)||(33984761-33984825)
chr4 (344-388)||(49334550-49334594)
chr4 (325-388)||(44449130-44449193)
chr4 (329-388)||(44587685-44587744)
chr4 (338-388)||(6244974-6245024)
chr4 (338-388)||(10656846-10656896)
chr4 (338-388)||(10658049-10658099)
chr4 (338-388)||(10870991-10871041)
chr4 (338-388)||(10872194-10872244)
chr4 (338-388)||(47633218-47633268)
chr4 (338-388)||(53284684-53284734)
chr4 (339-388)||(28779122-28779171)
chr4 (233-302)||(44558384-44558453)
chr4 (344-388)||(26919350-26919394)
chr4 (344-388)||(28460168-28460211)
chr4 (344-388)||(30410748-30410791)
chr4 (324-388)||(30654040-30654103)
chr4 (324-388)||(31998364-31998427)
chr4 (324-388)||(55611199-55611262)
chr4 (63-118)||(25993847-25993902)
chr4 (322-388)||(41579537-41579604)
chr4 (233-288)||(47941989-47942044)
chr4 (339-374)||(54687450-54687485)
chr4 (236-302)||(2827568-2827634)
chr4 (338-388)||(19802524-19802574)
chr4 (311-341)||(28258421-28258451)
chr4 (338-388)||(39839491-39839541)
chr4 (338-388)||(43375318-43375368)
chr4 (338-388)||(43939476-43939526)
chr4 (338-388)||(45560009-45560059)
chr4 (338-388)||(55661121-55661170)
chr4 (347-388)||(2943010-2943051)
chr4 (338-379)||(26188895-26188936)
chr4 (242-287)||(27624985-27625030)
chr4 (343-388)||(37498766-37498810)
chr4 (311-368)||(47093465-47093522)
chr4 (344-388)||(317950-317994)
chr4 (338-378)||(7896001-7896041)
chr4 (55-115)||(13450728-13450788)
chr4 (344-388)||(25697515-25697559)
chr4 (348-388)||(31220646-31220686)
chr4 (344-388)||(32013076-32013120)
chr4 (329-365)||(33434308-33434344)
chr4 (336-364)||(38006112-38006140)
chr4 (324-388)||(45550186-45550249)
[»] chr2 (59 HSPs)
chr2 (32-184)||(37417558-37417710)
chr2 (61-184)||(39803-39926)
chr2 (61-183)||(15372780-15372902)
chr2 (32-184)||(42879595-42879748)
chr2 (36-180)||(42001893-42002036)
chr2 (311-388)||(45377438-45377515)
chr2 (78-184)||(25619943-25620049)
chr2 (36-184)||(15432606-15432753)
chr2 (311-388)||(6432921-6432998)
chr2 (311-388)||(40789517-40789594)
chr2 (52-184)||(39116-39243)
chr2 (36-179)||(29909364-29909502)
chr2 (36-184)||(92049-92193)
chr2 (61-135)||(41706859-41706933)
chr2 (233-302)||(15432492-15432561)
chr2 (324-388)||(10245769-10245832)
chr2 (324-388)||(37241725-37241789)
chr2 (231-302)||(37417437-37417508)
chr2 (338-388)||(7455211-7455261)
chr2 (338-388)||(14452951-14453001)
chr2 (334-388)||(34246022-34246076)
chr2 (344-388)||(1875344-1875388)
chr2 (233-301)||(25619825-25619893)
chr2 (340-388)||(36935421-36935469)
chr2 (324-388)||(40861699-40861762)
chr2 (333-388)||(18109209-18109263)
chr2 (329-388)||(30219067-30219126)
chr2 (338-388)||(6321400-6321450)
chr2 (338-388)||(16495946-16495996)
chr2 (343-388)||(15264851-15264896)
chr2 (343-388)||(18247380-18247425)
chr2 (233-302)||(29909551-29909620)
chr2 (343-388)||(36985997-36986042)
chr2 (324-388)||(1086572-1086636)
chr2 (324-388)||(7182779-7182842)
chr2 (344-388)||(7454009-7454052)
chr2 (324-388)||(11447776-11447840)
chr2 (336-388)||(18240033-18240085)
chr2 (344-388)||(38325015-38325059)
chr2 (324-388)||(42520468-42520531)
chr2 (55-118)||(11315064-11315127)
chr2 (329-368)||(27865529-27865568)
chr2 (236-302)||(39291-39357)
chr2 (338-388)||(14958786-14958836)
chr2 (63-157)||(20941034-20941128)
chr2 (338-388)||(33179622-33179672)
chr2 (56-118)||(40097894-40097956)
chr2 (235-301)||(42001774-42001840)
chr2 (339-388)||(3147981-3148030)
chr2 (60-141)||(4416684-4416765)
chr2 (343-388)||(5774778-5774823)
chr2 (343-388)||(30524351-30524396)
chr2 (336-364)||(240049-240077)
chr2 (324-388)||(8340644-8340706)
chr2 (344-388)||(21721918-21721962)
chr2 (324-388)||(32481743-32481806)
chr2 (323-359)||(32656042-32656078)
chr2 (332-388)||(38245423-38245479)
chr2 (344-388)||(39239938-39239982)
[»] chr6 (26 HSPs)
chr6 (61-184)||(2968405-2968528)
chr6 (52-183)||(4641636-4641767)
chr6 (52-184)||(29077608-29077740)
chr6 (52-184)||(29112580-29112712)
chr6 (36-184)||(30641032-30641174)
chr6 (311-388)||(20525956-20526033)
chr6 (329-388)||(1291086-1291145)
chr6 (338-388)||(22707997-22708047)
chr6 (338-388)||(24118554-24118604)
chr6 (324-388)||(4977056-4977119)
chr6 (324-388)||(18802244-18802307)
chr6 (63-133)||(4314599-4314669)
chr6 (338-388)||(18368955-18369005)
chr6 (338-388)||(20646372-20646422)
chr6 (338-388)||(32560591-32560641)
chr6 (338-388)||(32561779-32561829)
chr6 (323-388)||(12131164-12131229)
chr6 (60-157)||(25171828-25171924)
chr6 (324-388)||(191457-191520)
chr6 (324-388)||(1790323-1790386)
chr6 (324-388)||(18368235-18368298)
chr6 (324-388)||(21527514-21527578)
chr6 (324-388)||(31603412-31603476)
chr6 (329-388)||(31259052-31259110)
chr6 (343-384)||(14856179-14856220)
chr6 (233-302)||(29077492-29077561)
[»] scaffold0115 (1 HSPs)
scaffold0115 (324-388)||(14237-14300)
[»] scaffold0464 (1 HSPs)
scaffold0464 (338-388)||(5345-5395)
[»] scaffold0325 (1 HSPs)
scaffold0325 (338-388)||(19052-19102)


Alignment Details
Target: chr3 (Bit Score: 153; Significance: 6e-81; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 4 - 184
Target Start/End: Original strand, 24382555 - 24382735
Alignment:
Q  4 ggaaaaacaacccaactatggggtatcaacaaaaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttt 103  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  24382555 ggaaaaacaacccaactatggggcatcaacagaaactttaaaaacgtgagaatcgtcggagatgatgatgattttgaaggggtgaaaatggagaatgttt 24382654  T
Q  104 tagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  24382655 tagcgggaaggagaagagacaatgacgttttttatgtttctgagtgaaatgtgaagaaggaggtatgggtaatgcaggggc 24382735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 33112882 - 33113022
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||| ||||  |||||||||    
T  33112882 aaacttcaaaaacgtgagaatcgctggagatgatgatgattttggagaggtgagaatggagaaagttttagcgggaatgagaagggtcagagacgttttt 33112981  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaat 176  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  33112982 tatgtttatgagtgaaatgtgaggaaggaggtatgggtaat 33113022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 156
Target Start/End: Complemental strand, 23774579 - 23774455
Alignment:
Q  32 acaaaaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgt 131  Q
    |||| ||||| || ||| |||||||||||| ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  23774579 acaacaacttcaagaacatgagaatcgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaaggacgt 23774480  T
Q  132 tttttatgtttctgagtgaaatgtg 156  Q
    |||||||||||||||| ||||||||    
T  23774479 tttttatgtttctgagagaaatgtg 23774455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 33852377 - 33852518
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| |||||| || ||||||    
T  33852377 aaacttcaaaaacgtcagaatcgccggtgatgatgatgattttggaggggtgagaatggagaaagttttagcggaaaggtgaaaagtcaaggatgttttt 33852476  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcag 180  Q
    ||||||||||| |||||||   ||||||||||||| |||||||||    
T  33852477 tatgtttctgactgaaatg---tgaaggaggtatgggtaatgcag 33852518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 48634310 - 48634161
Alignment:
Q  32 acaaaaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgt 131  Q
    |||| ||||| ||||||||| |||||||||||||||||| |   ||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  48634310 acaacaacttcaaaaacgtgcgaatcgtcggagatgatggt---tttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaaggacgt 48634214  T
Q  132 tttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||| |||||| |||| ||||||||| |||||| ||| |  ||||||||||||    
T  48634213 ttttgatgtttttgagagaaatgtgaggaaggaagtaaggataatgcaggggc 48634161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 2977050 - 2977174
Alignment:
Q  60 cggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatg 159  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||| ||||   || ||||| ||||||||||||||||||||| |    
T  2977050 cggagatgatgatgattttggagaggtgagaatggagaaggtttttgcgggaagaagaagggtcacgaacatttttgatgtttctgagtgaaatgtgagg 2977149  T
Q  160 aaggaggtatgagtaatgcaggggc 184  Q
    ||||||||||||||||| |||||||    
T  2977150 aaggaggtatgagtaatacaggggc 2977174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 184
Target Start/End: Original strand, 41020715 - 41020847
Alignment:
Q  52 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaa 151  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||| |||||||||||| ||    
T  41020715 agaatcgatggagatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgagtaaa 41020814  T
Q  152 atgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||| |||| ||  ||  |||||||||||||    
T  41020815 atgtgaagaagaagaaatatgtaatgcaggggc 41020847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 18429973 - 18430121
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| | ||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||| || | |||  ||||| || ||||||    
T  18429973 aaacttcaaaaacgtcaaaatcgccggtgatgatgatgattttggaggggtgagaatggagaaagttttagcggaaatgtgaaaggtcaaggatgttttt 18430072  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     ||| |||||| |||||||||| ||| |||||||| |||||||||||||    
T  18430073 gatgcttctgactgaaatgtgaagaatgaggtatgggtaatgcaggggc 18430121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 31887148 - 31887288
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||| || |||||||| ||||||||| |||||||||  || |||| |||||||||| |||||||||||||||||||   ||||||||||||||    
T  31887148 aaacttcaaaaccgcgagaatcgccggagatgacgatgattttatagaggtgggaatggagaaagttttagcgggaaggagaatgttcaatgacgttttt 31887247  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaat 176  Q
     || ||| |||||||||||||| ||||||||||||||||||    
T  31887248 gatatttttgagtgaaatgtgaggaaggaggtatgagtaat 31887288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 45898079 - 45898222
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| ||||| || ||||||| |||||||||||||| |||||||||||||| ||||||| | ||||||||| |||| ||||| ||||| |||||||||    
T  45898079 aaacttcaaaaatgtcagaatcgccggagatgatgatgtttttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgttttt 45898178  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     |||||      |||||||||| |||||||||||| |||||||||||||    
T  45898179 gatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 45898222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 183
Target Start/End: Original strand, 23888475 - 23888617
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||| ||||| ||||| | |||||||    
T  23888475 aaacttaaaaaatgtcagaatcgtcggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggtcgttttt 23888574  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcagggg 183  Q
     |||||      |||||||||| ||| ||| |||| ||||||||||||    
T  23888575 gatgtt-----ctgaaatgtgaagaaagagatatgggtaatgcagggg 23888617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 24382784 - 24382853
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||||| || ||||| |||||||||||||||| ||||||||||||||||    
T  24382784 actttttccaattcaatcaaattagtccttgaacacgtggcttcctttttgccccgtatataagacaaca 24382853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 45256922 - 45257065
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| ||||||| | | || |||||||||||||||||||||||||||||||| |||||||||| ||||  ||  ||||| || ||||||    
T  45256922 aaacttcaaaaacgtcagaatcgccagtga-gatgatgattttggaggggtgagaatggagaaagttttagcggaaaggtaaaaggtcaaggatgttttt 45257020  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     |||||| ||| | |||||   ||||||| ||||| |||||||||||||    
T  45257021 gatgttt-tgactaaaatg---tgaaggatgtatgggtaatgcaggggc 45257065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 4071362 - 4071439
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||| |||||  |||| ||||||||||||||||||||||||| ||||  |||||||||| |||||||    
T  4071362 tttataaagaaataataataagaaaatgtgtacttttatgtcattttatatttgtcagctatttcaacagttaatttt 4071439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 54093092 - 54093011
Alignment:
Q  60 cggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtt 141  Q
    ||||||||||||||||||||||| ||||| ||||  ||| |||||||||||||||||||  ||||  |||||||||||||||    
T  54093092 cggagatgatgatgattttggagaggtgaaaatgatgaaggttttagcgggaaggagaaaggtcatggacgttttttatgtt 54093011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 46115564 - 46115628
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  46115564 aaaattaaacaagcatgtccttttatgtcattttatatttatcagtcacttcaacagctaatttt 46115628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 46116231 - 46116295
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  46116231 aaaattaaacaagcatgtccttttatgtcattttatatttatcagtcacttcaacagctaatttt 46116295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 18430160 - 18430231
Alignment:
Q  231 ggactttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||||||| || ||||| ||| |||||| ||||||||| || |||||||||    
T  18430160 ggactttttccaattcaatcaaattagtccttgaacacgtggtttccttcttgccacgtgtacaagacaaca 18430231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 33852563 - 33852630
Alignment:
Q  235 tttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||| || ||||| |||||||||| ||||||||| || |||||||||    
T  33852563 tttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtctacaagacaaca 33852630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 45257109 - 45257180
Alignment:
Q  231 ggactttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||| || ||||||||| || |||||||||    
T  45257109 ggactttttccaattcaatcaaattagtccttgaacacgtggcttcattcttgccacgtgtacaagacaaca 45257180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 334 - 388
Target Start/End: Complemental strand, 34435400 - 34435346
Alignment:
Q  334 aaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  34435400 aaatatgtccttttatgtcattttatatttatcagccacttcaacagctaatttt 34435346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 50197447 - 50197397
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  50197447 atgtacttttatgtcattttatatttatcactcatttcaaaagctaatttt 50197397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 48634112 - 48634047
Alignment:
Q  235 tttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaa 300  Q
    ||||| ||||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||    
T  48634112 ttttttcaattcaatcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaagacaa 48634047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 23774386 - 23774315
Alignment:
Q  231 ggactttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||| |||||| |||||||| || ||||| |||||||||| ||||||||| || |||||||||    
T  23774386 ggactttttccaaatcaatcgaattagtccttgaacacgtggcttccttattgccacgtgtacaagacaaca 23774315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 388
Target Start/End: Complemental strand, 25998572 - 25998510
Alignment:
Q  326 aaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||| ||||  ||||||||||||||||||| |||||||| ||||||| ||||||||    
T  25998572 aaataaacaaacatgtctttttatgtcattttatattaatcagtcacttcaacaactaatttt 25998510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 1362384 - 1362448
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||| ||| ||| |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  1362384 aaaaaaaaaaaaacatgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 1362448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 6586809 - 6586872
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  6586809 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 6586872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 33113074 - 33113138
Alignment:
Q  235 tttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagaca 299  Q
    |||||||| ||| |||||||||||| || ||||| |||||||||||||||||||| || ||||||    
T  33113074 tttttccacttccatcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaagaca 33113138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 38732690 - 38732753
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38732690 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 38732753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 40374070 - 40374007
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  40374070 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 40374007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 43967274 - 43967210
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||| | ||| ||| ||||||||||||||| |||||| ||||||||| ||||||||||    
T  43967274 aaaaataaacatacatgcactcttatgtcattttatacttatcactcatttcaaaagctaatttt 43967210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 46668878 - 46668941
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  46668878 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 46668941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 388
Target Start/End: Complemental strand, 8320860 - 8320797
Alignment:
Q  325 aaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||| ||| |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  8320860 aaaaaaaaaaaacatgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 8320797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 388
Target Start/End: Original strand, 36238551 - 36238614
Alignment:
Q  325 aaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||| ||| |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  36238551 aaaaaaaaaaaacatgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 36238614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 51454059 - 51454102
Alignment:
Q  141 ttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    ||||||||||||||||| |||||||||||| |||||||||||||    
T  51454059 ttctgagtgaaatgtgaagaaggaggtatgtgtaatgcaggggc 51454102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 8880082 - 8880132
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  8880082 atgttcttttatgtcattttatacttatcagccacttcaacagctaatttt 8880132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 26449018 - 26449076
Alignment:
Q  60 cggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaa 118  Q
    ||||||||||||||||||||||| |||||  |||| ||| |||||||||| ||||||||    
T  26449018 cggagatgatgatgattttggagaggtgaagatggtgaaggttttagcggaaaggagaa 26449076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 30741255 - 30741205
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||| ||||||| |||||||||| ||||||||||||||||    
T  30741255 atgtccttttatgtccttttatacttatcagtcacttcaacagctaatttt 30741205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 42878472 - 42878522
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  42878472 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 42878522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 50936428 - 50936478
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| |||| ||||||||||||| ||||||||    
T  50936428 atgtccttttatgtcattttatacttattagtcatttcaacaactaatttt 50936478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 51454137 - 51454206
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||| ||||| |||| |||||||| || ||||| |||| ||||| ||||||||| ||||||||||||    
T  51454137 acttttttcaatttaatctaattagtccttgaacacgtggcctccttcttgccacgtgtataagacaaca 51454206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 30317360 - 30317316
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||    
T  30317360 ttttatgtcattttatacttatcagccacttcaacagctaatttt 30317316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 32389676 - 32389613
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| |||||||| |||||||    
T  32389676 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagttaatttt 32389613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 35324367 - 35324304
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  35324367 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacaactaatttt 35324304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 36545320 - 36545360
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  36545320 atgtcattttatattcatcagtcatttcaacacctaatttt 36545360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 36562994 - 36562954
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  36562994 atgtcattttatattcatcagtcatttcaacacctaatttt 36562954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 36659704 - 36659641
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| |||||||| |||||||||||||| ||||| ||||||||||||||||    
T  36659704 aaaattaaacaagcatgtccttttatgccattttatatttat-agtcacttcaacagctaatttt 36659641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 36807461 - 36807524
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  36807461 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacaactaatttt 36807524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 45898271 - 45898323
Alignment:
Q  236 ttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacg 288  Q
    ||||||||||||||||||||||||  | ||||| |||||||||| ||||||||    
T  45898271 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacg 45898323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 388
Target Start/End: Original strand, 35406280 - 35406323
Alignment:
Q  345 tttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||| ||||||| || ||||||||||||||||    
T  35406280 tttatgtcattttatacttatcagccacttcaacagctaatttt 35406323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 443584 - 443646
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatt 386  Q
    |||| |||||| |||| ||||||||||||||||||||| ||| ||||| || || ||||||||    
T  443584 aaaattaaacacatatatacttttatgtcattttatatctatgagtcactttaaaagctaatt 443646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 1846001 - 1845951
Alignment:
Q  249 tcaaattagtcattcaacacttggcttcctttttgccacgtatataagaca 299  Q
    ||||||||||| || ||||| |||||||||||||||||||| |||| ||||    
T  1846001 tcaaattagtccttgaacacgtggcttcctttttgccacgtgtataggaca 1845951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 23888666 - 23888732
Alignment:
Q  236 ttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||  | ||||  |||||||||| ||||||||  || |||||||||    
T  23888666 ttttccaattcaatcaaattagtccctgaacatgtggcttccttcttgccacgcgtacaagacaaca 23888732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 31887358 - 31887412
Alignment:
Q  248 atcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||| || ||||  |||||||||||||||||||| || |||||||||    
T  31887358 atcaaattagtccttgaacatatggcttcctttttgccacgtgtacaagacaaca 31887412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 32111103 - 32111054
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  32111103 atgtccttttatgtcattttatatttat-agtcacttcaacatctaatttt 32111054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 41991059 - 41991009
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||||||||||||||||||||  | || |||||||||||||    
T  41991059 atgtccttttatgtcattttatatttatcagcaactttaacagctaatttt 41991009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 51063562 - 51063612
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  51063562 atgtccttttatgtcattttatacttatcagccacttcaacaactaatttt 51063612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 1846170 - 1846065
Alignment:
Q  79 ggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgc 178  Q
    |||| ||| |||||||||||  |||||||||||| |||||| ||||| |||    || ||||||| || |||||||||| ||| ||| |||| ||||| |    
T  1846170 ggagaggtcagaatggagaaaattttagcgggaaagagaagggtcaaagactaagttgatgtttcagactgaaatgtgaggaatgagatatgggtaatac 1846071  T
Q  179 aggggc 184  Q
    ||||||    
T  1846070 aggggc 1846065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 7042400 - 7042441
Alignment:
Q  347 tatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||| ||||||| || ||||||||||||||||    
T  7042400 tatgtcattttatacttatcagccacttcaacagctaatttt 7042441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 7475299 - 7475258
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttat 365  Q
    |||| |||||||| |||| |||||||||||||||||||||||    
T  7475299 aaaattaaacaaacatgttcttttatgtcattttatatttat 7475258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 55226854 - 55226903
Alignment:
Q  339 tgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||| ||||||||||||||||||| |||||| ||  |||||||||    
T  55226854 tgtacttttctgtcattttatatttatcaatcattttaaacgctaatttt 55226903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 364
Target Start/End: Original strand, 5506534 - 5506562
Alignment:
Q  336 atatgtacttttatgtcattttatattta 364  Q
    |||||||||||||||||||||||||||||    
T  5506534 atatgtacttttatgtcattttatattta 5506562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 25164963 - 25164911
Alignment:
Q  336 atatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||| ||||||| |||||||||||||| || ||||  |||||||    
T  25164963 atatgtacttttacgtcatttgatatttatcagtcactttaacaattaatttt 25164911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 44895245 - 44895209
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttat 365  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  44895245 taaacatatatgtacttttaagtcattttatatttat 44895209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 48072709 - 48072753
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||| |||||||| ||||||| || ||||||||||||||||    
T  48072709 ttttatgttattttatacttatcagccacttcaacagctaatttt 48072753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 50937666 - 50937626
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||| |||||||||| ||||||| ||||||||    
T  50937666 atgtcattttatacttatcagtcacttcaacatctaatttt 50937626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 54462838 - 54462798
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||| || ||||||| ||||||||    
T  54462838 atgtcattttatatttatcagccacttcaacaactaatttt 54462798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 40784778 - 40784626
Alignment:
Q  32 acaaaaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgt 131  Q
    |||||||||| ||| |||||||||||| |  ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  |    
T  40784778 acaaaaacttcaaacacgtgagaatcgccaaagatggtgatgattttggaggggtgagaatggagaaagttttagcgggaaggagaagggtcaatgatat 40784679  T
Q  132 tttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  40784678 tttttatgtttctaagtgaaatgtgaagaaggaggtatgagtaatgcaggggc 40784626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 33038502 - 33038650
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||| || ||||||||||||    
T  33038502 aaacttcaaaaacatgagaatcgccggagatgatgatgattttggaggggtgggaatggagaaagttttagcgggaaggggaagggttaatgacgttttt 33038601  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     ||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  33038602 gatgtttctgagtgaaatgtgaagaaggaggtatgtataatgcaggggc 33038650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 46812279 - 46812427
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||  ||||| | |||||||    
T  46812279 aaacttcaaaaacgtcagaatcgtcggagatgatgatgattttggaggggtgagaatggagaaagttttagtgggaaggagaaaggtcaaggtcgttttt 46812378  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     |||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  46812379 gatgtttctgactgaaatgtgaagaatgaggtatgagtaatgcaggggc 46812427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 2167896 - 2167753
Alignment:
Q  41 ttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgt 140  Q
    ||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||||    
T  2167896 ttaaatacgtgagaatcgccggagatgaagatgattttggagaggtgagaatggagaaagttttagcgggaaggagaagggtcaaagacgtttttgatgt 2167797  T
Q  141 ttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||| |||||||||| |||||||||||| ||||| |||||||    
T  2167796 ttctgattgaaatgtgaggaaggaggtatgggtaatacaggggc 2167753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 23954233 - 23954085
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| ||||||||||||||||   ||||||||||||||||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||||    
T  23954233 aaacttcaaaaacgtgagaatcgcgagagatgatgatgattttggagaggtgagaatggagaaagttttagcaggtaggagaagagtcaaggacgttttt 23954134  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    ||||||| |||  ||||||||| |||||||||||| ||||| |||||||    
T  23954133 tatgtttatgaaagaaatgtgaggaaggaggtatgggtaatacaggggc 23954085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 38613887 - 38613744
Alignment:
Q  41 ttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgt 140  Q
    ||||| |||||||||||   |||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||| ||||| ||||    
T  38613887 ttaaatacgtgagaatcactggagatgatgatgattttggagaggtgagaatagagaaagttttagcgggaaggagaagggtcaatgacatttttgatgt 38613788  T
Q  141 ttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    ||||||||||||||||| ||| ||||||||  |||| |||||||    
T  38613787 ttctgagtgaaatgtgaggaatgaggtatggataatacaggggc 38613744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 8423002 - 8423125
Alignment:
Q  61 ggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatga 160  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||| || |||||| |||||||||||| |||||||| ||    
T  8423002 ggagatgatgatgattttggagggatgacaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgagtaaaatgtgaaga 8423101  T
Q  161 aggaggtatgagtaatgcaggggc 184  Q
    |||||| ||  |||||||||||||    
T  8423102 aggaggaatatgtaatgcaggggc 8423125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 35344011 - 35344134
Alignment:
Q  61 ggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatga 160  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || || |||||| |||||||||||| |||||||| ||    
T  35344011 ggagatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagttaaggatgtttttgatgtttctgagtaaaatgtgaaga 35344110  T
Q  161 aggaggtatgagtaatgcaggggc 184  Q
    |||||| ||  |||||||||||||    
T  35344111 aggaggaatatgtaatgcaggggc 35344134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 311 - 388
Target Start/End: Complemental strand, 21920349 - 21920272
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21920349 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcagcagctaatttt 21920272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 27955777 - 27955657
Alignment:
Q  55 atcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatg 154  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||| ||||| ||||| ||||||||| |||||||||| ||||| |    
T  27955777 atcgtcggagatgatgatgattttggagaggtgagaatgg-gaaggtttaagcgggaagcagaagggtcaaggacgtttttaatgtttctgactgaaaag 27955679  T
Q  155 tgatgaaggaggtatgagtaat 176  Q
    ||| |||||||||||| |||||    
T  27955678 tgaggaaggaggtatgggtaat 27955657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 43 - 184
Target Start/End: Original strand, 47341396 - 47341534
Alignment:
Q  43 aaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgttt 142  Q
    |||||| | |||||||||||   |||||||||||||||||||||||||||| |||| |||||||||| |||| |||  ||||| || |||||| ||||||    
T  47341396 aaaaacttcagaatcgtcgg---tgatgatgattttggaggggtgagaatgaagaaagttttagcggaaaggtgaaatgtcaaggatgtttttgatgttt 47341492  T
Q  143 ctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    || | |||||||||| |||||||||||| |||||||||||||    
T  47341493 ctcactgaaatgtgaagaaggaggtatgggtaatgcaggggc 47341534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 141
Target Start/End: Original strand, 46996404 - 46996512
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaaga---gtcaatgacgtt 132  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||| ||||||   ||||| ||||||    
T  46996404 aaacttcaaaaatgtcagaatcgtcggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagaagggtcaaggacgtt 46996503  T
Q  133 ttttatgtt 141  Q
    ||| |||||    
T  46996504 tttgatgtt 46996512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 47341571 - 47341642
Alignment:
Q  231 ggactttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||| ||||||||| || |||||||||    
T  47341571 ggactttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaaca 47341642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 302
Target Start/End: Complemental strand, 40784576 - 40784510
Alignment:
Q  236 ttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||||||||||||||| || ||||  |||||||||| ||||||||| ||||||||||||    
T  40784576 ttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtataagacaaca 40784510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 44104119 - 44104055
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||| |||| ||||||||||||||||||||||||||||| ||||  ||||||||||    
T  44104119 aaaattaaacaaacatgtccttttatgtcattttatatttatcagtcacttcagaagctaatttt 44104055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 46733148 - 46733211
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  46733148 aaaattaaacaaacatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 46733211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 33038691 - 33038757
Alignment:
Q  236 ttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||| |||| || ||||| |||||||||| ||| ||||| ||||||||||||    
T  33038691 ttttccaattcaatcaaatcagtccttgaacacatggcttccttcttgacacgtgtataagacaaca 33038757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 46536802 - 46536852
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  46536802 atgtccttttatgtcattttatacttatcagtcacttcaacagctaatttt 46536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 23168485 - 23168392
Alignment:
Q  64 gatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtga 157  Q
    ||||||||||||||||||| ||| |  ||||  || |||||| ||||||||||||  |||||||| || ||| |||| ||||||||||||||||    
T  23168485 gatgatgatgattttggagaggttaagatggtaaaggttttaacgggaaggagaaaggtcaatgatgtgtttgatgtgtctgagtgaaatgtga 23168392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 33981689 - 33981644
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||||||| || ||||||||||||||||    
T  33981689 cttttatgtcattttatatttatcagccacttcaacagctaatttt 33981644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 388
Target Start/End: Complemental strand, 48312955 - 48312890
Alignment:
Q  323 taaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| ||| ||| |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  48312955 taaaaaaaaaaaaacatgttcttttatgtcattttatacttatcagccacttcaacagctaatttt 48312890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 9806155 - 9806092
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  9806155 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 9806092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 31620043 - 31620106
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  31620043 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 31620106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 35669928 - 35669865
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  35669928 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 35669865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 40061691 - 40061754
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  40061691 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 40061754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 41833238 - 41833175
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||  |||| ||||||||||||||||||||| | ||||| ||||||||||||||||    
T  41833238 aaaaataaacaagcatgttcttttatgtcattttatatttgt-agtcacttcaacagctaatttt 41833175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 388
Target Start/End: Original strand, 34307664 - 34307722
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||  |||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  34307664 taaacaatcatgtccttttatgtcattttatatttat-agtcatttcaacaactaatttt 34307722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 4061314 - 4061364
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  4061314 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 4061364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 37657661 - 37657612
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  37657661 atgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 37657612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 39869563 - 39869514
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  39869563 atgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 39869514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 368
Target Start/End: Original strand, 46535956 - 46535998
Alignment:
Q  326 aaataaacaaatatgtacttttatgtcattttatatttatcag 368  Q
    |||| ||||||||||| ||||||||||||||||||||||||||    
T  46535956 aaattaacaaatatgtccttttatgtcattttatatttatcag 46535998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 46996596 - 46996662
Alignment:
Q  236 ttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||||||||||| ||| || ||||| |||||||||| ||||||||  || |||||||||    
T  46996596 ttttccaattcaatcaaattcgtccttgaacacgtggcttccttcttgccacgcgtacaagacaaca 46996662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 27827441 - 27827486
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||    
T  27827441 cttttatgtcattttatacttatcagccacttcaacagctaatttt 27827486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 28493646 - 28493601
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||    
T  28493646 cttttatgtcattttatacttatcagccacttcaacagctaatttt 28493601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 31031373 - 31031328
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||    
T  31031373 cttttatgtcattttatatttatcagccacttcaacaactaatttt 31031328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 35669195 - 35669138
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcag 368  Q
    |||||||| ||||||||||||||||  |||  |||||| |||||||||||||||||||    
T  35669195 tttataaaaaaataaaaataaacaatcatgctcttttacgtcattttatatttatcag 35669138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 38226103 - 38226148
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| |||||||||| ||||||||    
T  38226103 cttttatgtcattttatacttatcagccatttcaacaactaatttt 38226148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 388
Target Start/End: Complemental strand, 42327548 - 42327483
Alignment:
Q  323 taaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| ||| ||| |||| |||||||||||||||||| ||||||  || ||||||||||||||||    
T  42327548 taaaaaaaaaaaaacatgtccttttatgtcattttatacttatcaaccacttcaacagctaatttt 42327483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 388
Target Start/End: Original strand, 43338325 - 43338390
Alignment:
Q  323 taaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| ||| ||| |||| |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  43338325 taaaaaaaaaaaaacatgtccttttatgtcattttatacttatcagccacttcaacaactaatttt 43338390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 44819260 - 44819305
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||    
T  44819260 cttttacgtcattttatatttatcagctatttcaacagctaatttt 44819305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 46350217 - 46350172
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||    
T  46350217 cttttatgtcattttatacttatcagccacttcaacagctaatttt 46350172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 30583223 - 30583266
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  30583223 ttttatgtcattttatatttat-agtcacttcaacagctaatttt 30583266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 31435836 - 31435773
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  31435836 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacatctaatttt 31435773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 42327125 - 42327081
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||    
T  42327125 ttttttgtcattttatatgtatcagtcatttcaacagttaatttt 42327081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 42826554 - 42826618
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||| || ||||||  |||||||||||||||| |||| ||||||| ||||||||    
T  42826554 aaaattaaacaaatacgtccttttacatcattttatatttatcggtcacttcaacaactaatttt 42826618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 46615045 - 46615001
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||    
T  46615045 ttttatgtcattttatacttatcagccacttcaacagctaatttt 46615001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 388
Target Start/End: Complemental strand, 31969035 - 31968977
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||  |||| ||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  31969035 taaacaagcatgttcttttatgtcattttatatttat-agtcacttcaacaactaatttt 31968977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 388
Target Start/End: Complemental strand, 42329213 - 42329155
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||  |||| ||||||||||||||||||||||| | ||| ||||||||||||||||    
T  42329213 taaacaagcatgtccttttatgtcattttatatttat-aatcacttcaacagctaatttt 42329155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 6244553 - 6244603
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| |||||||  | ||||||||||||||||    
T  6244553 atgtccttttatgtcattttatacttatcagctacttcaacagctaatttt 6244603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 23954023 - 23953969
Alignment:
Q  248 atcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||| |  ||||| |||||||||||||||||||| || |||||||||    
T  23954023 atcaaattagtcctggaacacgtggcttcctttttgccacgtgtacaagacaaca 23953969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 29993476 - 29993426
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||| |||||||| ||||||| || ||||||||||||||||    
T  29993476 atgtccttttatgttattttatacttatcagccacttcaacagctaatttt 29993426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 43544313 - 43544263
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  43544313 atgtccttttatgtcattttatacttatcagccacttcaacaactaatttt 43544263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 46330341 - 46330391
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||| ||||||| || || ||||| |||||||    
T  46330341 atgtacttttatgtcattttatacttatcagccactttaacagttaatttt 46330391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 25696585 - 25696634
Alignment:
Q  339 tgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||  ||||||||||||||||||||||||| ||  |||||||||    
T  25696585 tgtacttttccgtcattttatatttatcagtcattttaaacgctaatttt 25696634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 43157972 - 43158013
Alignment:
Q  347 tatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||| |||||||||| ||||||| ||||||||    
T  43157972 tatgtcattttatacttatcagtcacttcaacaactaatttt 43158013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 47483379 - 47483428
Alignment:
Q  339 tgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||| ||||||||||||||||||| |||||| ||  |||||||||    
T  47483379 tgtacttttctgtcattttatatttatcaatcattttaaacgctaatttt 47483428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 585295 - 585251
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||| ||||||| || ||||||| ||||||||    
T  585295 ttttatgtcattttatacttatcagccacttcaacaactaatttt 585251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 2492557 - 2492493
Alignment:
Q  235 tttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagaca 299  Q
    ||||| || ||| |||||||||||| || ||||| || ||||||||||||||||| || ||||||    
T  2492557 ttttttcacttccatcaaattagtccttgaacacgtgacttcctttttgccacgtgtacaagaca 2492493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 3116453 - 3116389
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| |||||| |||| ||||||||||||| ||||||| | || || ||||||| ||||||||    
T  3116453 aaaaattaacaaacatgttcttttatgtcattctatattttttagccacttcaacaactaatttt 3116389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 18804828 - 18804891
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||  |||| || |||||||| ||||||||||| |||||| ||||||| |||||||    
T  18804828 aaaaataaacaagcatgtcctcttatgtcagtttatatttat-agtcatctcaacagttaatttt 18804891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 21261906 - 21261958
Alignment:
Q  336 atatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| |||||| |||||||||||||||||||  | ||||||| ||||||||    
T  21261906 atatgttcttttacgtcattttatatttatcagctacttcaacaactaatttt 21261958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 25751730 - 25751794
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||| |||||||  ||||||||| ||||||||||||| ||| |||| |||| ||||||||    
T  25751730 aaaagtaaataaatatgaccttttatgtaattttatatttataagttattttaacaactaatttt 25751794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 31029986 - 31029947
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  31029986 atgtcattttatatttat-agtcacttcaacagctaatttt 31029947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 36821327 - 36821367
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||| ||||||||| ||||||| ||||||||    
T  36821327 atgtcattttatatgtatcagtcacttcaacaactaatttt 36821367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 43467570 - 43467507
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| || || ||||||| ||||||||    
T  43467570 aaaattaaacaagcatgtccttttatgtcattttatatttat-agccacttcaacaactaatttt 43467507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 44571445 - 44571489
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||| |||||||||||||||||||  | ||||||||||||||||    
T  44571445 ttttacgtcattttatatttatcagctacttcaacagctaatttt 44571489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 46614784 - 46614816
Alignment:
Q  332 acaaatatgtacttttatgtcattttatattta 364  Q
    |||||||||| ||||||||||||||||||||||    
T  46614784 acaaatatgtccttttatgtcattttatattta 46614816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 18183646 - 18183786
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  18183646 aaacttcaaaaacgtgagaatcgccggagatgatgatgattttggagaggtgagaatggagaaagttttagcgggaaggagaagggtcaatgacgttttt 18183745  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaat 176  Q
     ||||||||||||||||||| | |||||||||||| |||||    
T  18183746 gatgtttctgagtgaaatgtaaggaaggaggtatgggtaat 18183786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 36 - 182
Target Start/End: Complemental strand, 6575594 - 6575448
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||| ||||| |||||||||    
T  6575594 aaacttcaaaaacgtcagaatcatcggagatgatgatgattttggaggggtgagaatggataaagttttagtgggaaggagaagggtcaaggacgttttt 6575495  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggg 182  Q
    ||| ||||| | |||||||||| |||||||||||| |||||||||||    
T  6575494 tatttttctaactgaaatgtgaagaaggaggtatgggtaatgcaggg 6575448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 311 - 388
Target Start/End: Complemental strand, 44277529 - 44277452
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44277529 tttataaagaaataaaaataaacaaatatgaacttttatgtcattttatatttatcagtcatttcaacagctaatttt 44277452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 35479668 - 35479816
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||| | |||||||||| |||||||||||||||||||| || ||||||| | || ||||||| |||||||||||| ||||| |||||||||    
T  35479668 aaacttcaaaaacatcagaatcgtcgaagatgatgatgattttggagaggcgagaatgaataaagttttagtgggaaggagaagggtcaaggacgttttt 35479767  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    ||| ||||||| |||||| ||| |||||| ||||| |||||| ||||||    
T  35479768 tatttttctgactgaaatatgaagaaggatgtatgggtaatgtaggggc 35479816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 52 - 184
Target Start/End: Original strand, 47269168 - 47269300
Alignment:
Q  52 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaa 151  Q
    |||||||  |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||| ||| |||||||| ||    
T  47269168 agaatcgatggagatgaggatgattttggaggggtgaaaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatggttctgagtaaa 47269267  T
Q  152 atgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||| |||| ||| ||  |||||||||||||    
T  47269268 atgtgaagaagaaggaatatgtaatgcaggggc 47269300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 42134907 - 42134759
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| ||||||| ||  ||| ||||||||||||||||||||||||||||||| |||||||||| |||  |||  ||||| || ||||||    
T  42134907 aaacttcaaaaacgtcagaatcgccgatgattatgatgattttggaggggtgagaatggagaaagttttagcggaaagatgaaaggtcaaggatgttttt 42134808  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     |||||||||| |||||||||| ||| |||||||| ||||||| |||||    
T  42134807 gatgtttctgactgaaatgtgaagaaagaggtatgggtaatgccggggc 42134759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 163
Target Start/End: Original strand, 45380679 - 45380806
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||| || | |||  ||||| || ||||||    
T  45380679 aaacttcaaaaacgtcagaatcgccggtgatgatgatgattttggaggggtgagaatggagaaagttttagcggaaatgtgaaaggtcaaggatgttttt 45380778  T
Q  136 tatgtttctgagtgaaatgtgatgaagg 163  Q
     |||||||||| |||||||||| |||||    
T  45380779 gatgtttctgactgaaatgtgaagaagg 45380806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 184
Target Start/End: Original strand, 36895229 - 36895356
Alignment:
Q  52 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaa 151  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||   ||||||||| |||| |||||  |||||||||||||| |||||     |||||    
T  36895229 agaatcgtcggagatgatgatgattttggagggatgaaaatggaggtagttttagcgagaagaagaaggatcaatgacgtttttgatgtt-----gtgaa 36895323  T
Q  152 atgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||| |||||||||||| |||||||||||||    
T  36895324 atgtgaagaaggaggtatgggtaatgcaggggc 36895356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 90 - 183
Target Start/End: Complemental strand, 27940982 - 27940889
Alignment:
Q  90 aatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcagggg 183  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| |||||||| ||  ||||||||||||    
T  27940982 aatggagaacgttttagcgggaaggagaagagtcaatgatgtttttgatgtttctgagtaaaatgtgaagaaggaggaatatgtaatgcagggg 27940889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 44158211 - 44158066
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| ||||| || ||||||| ||| |||||||||||||||| | |||||||||||||||| |||||||  | |||| |||  ||||| || ||||||    
T  44158211 aaacttcaaaaaagtcagaatcgccggtgatgatgatgattttgaaagggtgagaatggagaaagttttagtagaaaggtgaaaggtcaaggatgttttt 44158112  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     |||||||||| |||||||   ||||||||||||| |||||||||||||    
T  44158111 gatgtttctgactgaaatg---tgaaggaggtatgggtaatgcaggggc 44158066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 31802055 - 31801916
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| ||||| || ||||||| |||||||||||||||||||||||| |||| | ||||| | ||||||||| |||| ||||| |||||||||||||||    
T  31802055 aaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggagtgaaagtggaggaagttttagcgagaagaagaagggtcaatgacgttttt 31801956  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcag 180  Q
     |||||      |||||||||| |||| ||||||| |||||||||    
T  31801955 gatgtt-----ctgaaatgtgaagaagtaggtatgggtaatgcag 31801916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 183
Target Start/End: Original strand, 46638509 - 46638651
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| ||||| || |||||||||| |||||||||||||||||||||||||| ||||||| | |||||||||  ||| ||||| ||||| |||||||||    
T  46638509 aaacttcaaaaatgtcagaatcgtcgaagatgatgatgattttggaggggtgaaaatggaggaagttttagcgaaaagaagaagggtcaaagacgttttt 46638608  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcagggg 183  Q
     |||||      |||||||||| ||||||| ||||  |||||||||||    
T  46638609 gatgtt-----ctgaaatgtgaagaaggagttatggataatgcagggg 46638651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 45380873 - 45380944
Alignment:
Q  231 ggactttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||| ||||||||| || |||||||||    
T  45380873 ggactttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaaca 45380944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 326 - 388
Target Start/End: Complemental strand, 2458488 - 2458426
Alignment:
Q  326 aaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||||||||||| ||||||||    
T  2458488 aaataaacaaacatgtccttttatgtcattttatattaatcagtcatttcaacaactaatttt 2458426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 33685140 - 33685208
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaac 301  Q
    ||||||||||||||||||||||||||| || ||||| |||||||||| ||||||||| || ||||||||    
T  33685140 actttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaac 33685208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 42134717 - 42134646
Alignment:
Q  231 ggactttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||||||| || ||||  |||||||||| ||||||||| || |||||||||    
T  42134717 ggactttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtacaagacaaca 42134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 334 - 388
Target Start/End: Original strand, 31497177 - 31497231
Alignment:
Q  334 aaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| ||||||||    
T  31497177 aaatatgtccttttatgtcattttatacttatcagtcatttcaacaactaatttt 31497231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 44157665 - 44157597
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||||| || ||||| |||||||||| ||||||||| || |||||||||    
T  44157665 actttttccaattcaatcaaattagtc-ttgaacacgtggcttccttcttgccacgtgtacaagacaaca 44157597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 3795523 - 3795460
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  3795523 aaaattaaacaaacatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 3795460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 12015359 - 12015423
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||| ||| ||| |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  12015359 aaaaaaaaaaaaacatgtccttttatgtcattttatatttatcagccacttcaacagctaatttt 12015423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 4639535 - 4639485
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  4639535 atgtccttttatgtcattttatacttatcagtcaattcaacagctaatttt 4639485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 30358757 - 30358807
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  30358757 atgtccttttatgtcattttatatttatcagccacttcaacagctaatttt 30358807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 388
Target Start/End: Original strand, 38059195 - 38059257
Alignment:
Q  326 aaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||  |||||| ||||||||    
T  38059195 aaataaacaaacatgttcttttatgtcattttatattaatcagtcacgtcaacaactaatttt 38059257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 9224378 - 9224441
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||| |||| ||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  9224378 aaaattaaacaaacatgtccttttatgttattttatatttat-agtcacttcaacagctaatttt 9224441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 14390956 - 14391019
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| |||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  14390956 aaaaattaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 14391019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 18183837 - 18183904
Alignment:
Q  235 tttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||| ||| |||||||||||| || ||||| ||||||| |||||||||||| || |||||||||    
T  18183837 tttttccacttccatcaaattagtccttgaacacgtggcttcttttttgccacgtgtacaagacaaca 18183904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 388
Target Start/End: Original strand, 35180371 - 35180417
Alignment:
Q  341 tacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  35180371 tacttttatgtcattttatatttat-agtcacttcaacagctaatttt 35180417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 31656905 - 31656954
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  31656905 atgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 31656954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 36740200 - 36740250
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  36740200 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 36740250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 39326289 - 39326339
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  39326289 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 39326339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 46638701 - 46638767
Alignment:
Q  236 ttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||||||||||| |||  | ||||| |||||||||||||||||||  || |||||||||    
T  46638701 ttttccaattcaatcaaattcgtccctgaacacgtggcttcctttttgccacgcgtacaagacaaca 46638767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 50585623 - 50585573
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  50585623 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 50585573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 5675377 - 5675320
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcag 368  Q
    |||||||| ||||||||||||||||  | || |||||| |||||||||||||||||||    
T  5675377 tttataaaaaaataaaaataaacaaccacgttcttttacgtcattttatatttatcag 5675320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 25366318 - 25366367
Alignment:
Q  339 tgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||| |||||||||||||||||||||||||| ||  |||||||||    
T  25366318 tgtacttttctgtcattttatatttatcagtcattttaaatgctaatttt 25366367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 4513576 - 4513639
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| |||||||||| |||||||||||| ||||| ||||||||||||||||    
T  4513576 aaaattaaacaagcatgtccttttatgtccttttatatttat-agtcacttcaacagctaatttt 4513639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 6575414 - 6575354
Alignment:
Q  242 aattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||||||||| || ||||| |||||||||| ||||||||  || |||||||||    
T  6575414 aattcaatcaaattagtccttgaacacgtggcttccttcttgccacgcgtacaagacaaca 6575354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 38667722 - 38667785
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  38667722 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacaactaatttt 38667785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 39325077 - 39325014
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  39325077 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaatagctaatttt 39325014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 388
Target Start/End: Original strand, 33077120 - 33077167
Alignment:
Q  341 tacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||| |||||||||||||||||||||||||| ||  |||||||||    
T  33077120 tacttttctgtcattttatatttatcagtcattttaaacgctaatttt 33077167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 373
Target Start/End: Complemental strand, 39448000 - 39447950
Alignment:
Q  322 ataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatt 373  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||| |||||    
T  39448000 ataaaaataaacatatatgtacttt-atgtcattttatacttatcattcatt 39447950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 388
Target Start/End: Complemental strand, 42627795 - 42627737
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||  |||| ||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  42627795 taaacaagcatgtccttttatgttattttatatttat-agtcacttcaacagctaatttt 42627737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 36895404 - 36895470
Alignment:
Q  236 ttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||||||||||| |||  | ||||| |||||||||| ||||||||  || |||||||||    
T  36895404 ttttccaattcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacaaca 36895470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 1189521 - 1189476
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  1189521 cttttatgtcattttatacttatcagccacttcaacaactaatttt 1189476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 3569779 - 3569734
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  3569779 cttttatgtcattttatacttatcagccacttcaacaactaatttt 3569734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 33682925 - 33682974
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggagggg 85  Q
    |||||| |||||||| | ||||| |||||||||||||||||||| |||||    
T  33682925 aaacttcaaaaacgtcataatcgccggagatgatgatgattttgaagggg 33682974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 35479867 - 35479936
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||| ||||||||||||||||||  | ||||| ||||||| || ||||||||  || |||||||||    
T  35479867 actttttcaaattcaatcaaattagtccctgaacacgtggcttctttcttgccacgcgtacaagacaaca 35479936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 11824271 - 11824315
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||| ||||||| || ||||||| ||||||||    
T  11824271 ttttatgtcattttatacttatcagccacttcaacatctaatttt 11824315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 27668201 - 27668244
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||| ||||| |||||||| |||||||    
T  27668201 ttttatgtcattttatatttat-agtcacttcaacagttaatttt 27668244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 364
Target Start/End: Original strand, 34086767 - 34086795
Alignment:
Q  336 atatgtacttttatgtcattttatattta 364  Q
    |||||||||||||||||||||||||||||    
T  34086767 atatgtacttttatgtcattttatattta 34086795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 40942418 - 40942462
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||| ||||| | |||||| |||||||||    
T  40942418 ttttatgtcattttatatttgtcagttagttcaaccgctaatttt 40942462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 45900822 - 45900862
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||| ||||||| || ||||||||||||||||    
T  45900822 atgtcattttatacttatcagccacttcaacagctaatttt 45900862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 6e-50; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 42897465 - 42897617
Alignment:
Q  32 acaaaaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgt 131  Q
    |||| ||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  42897465 acaacaacttcaaaaacgtgagaatcgtcgaagatgatgatggttttggagtggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgt 42897564  T
Q  132 tttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||||||||||||| ||||||||| |||||| ||||  |||||||||||||    
T  42897565 tttttatgtttctgagagaaatgtgaggaaggaagtatcggtaatgcaggggc 42897617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 32822789 - 32822641
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| |||||||||||||||||||||||||||| || || ||||||| | || ||||||| |||||||||||| |||||||||||||||    
T  32822789 aaacttcaaaaacgtcagaatcgtcggagatgatgatgattttgaagaggcgagaatgaataaagttttagtgggaaggagaagggtcaatgacgttttt 32822690  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    ||| ||||||| |||||||||| |||||||||||| |||||| ||||||    
T  32822689 tatttttctgactgaaatgtgaagaaggaggtatgggtaatgtaggggc 32822641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 37525719 - 37525868
Alignment:
Q  32 acaaaaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgt 131  Q
    |||||||||| | | |||||||||||| | |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| | | |    
T  37525719 acaaaaacttcacagacgtgagaatcgccagagatgatgatgattttggaggggtgagaatgaagaaagttttagcgggaaggagaagagtcaaggccat 37525818  T
Q  132 tttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||||| || |||||||||||   ||||||||||||| |||||||| ||||    
T  37525819 tttttatgcttatgagtgaaatg---tgaaggaggtatgggtaatgcatgggc 37525868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 8654901 - 8654804
Alignment:
Q  60 cggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtga 157  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||    
T  8654901 cggagatgatgatgattttggaggggtgagaatggagaaagttttagcgggaaggagaagagtcaatgatgtttttgatgtttctgactgaaatgtga 8654804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 38882517 - 38882639
Alignment:
Q  62 gagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatgaa 161  Q
    ||||||||||||||||||||| ||||| ||||||||| | ||||| |||||||||||| |||||||||||||||||||||||||||||||| |||  |||    
T  38882517 gagatgatgatgattttggagcggtgaaaatggagaaggctttagtgggaaggagaagggtcaatgacgttttttatgtttctgagtgaaaagtggggaa 38882616  T
Q  162 ggaggtatgagtaatgcaggggc 184  Q
    ||||||||| ||||| |||||||    
T  38882617 ggaggtatgggtaatacaggggc 38882639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 462111 - 462214
Alignment:
Q  81 aggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcag 180  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| || || |||||||||||| |||| ||||    
T  462111 aggggtgagaatggagaaagttttagcgggaaggagaagggtcaatgacgttctttatgtttctgagtgaactgcgaagaaggaggtatgggtaacgcag 462210  T
Q  181 gggc 184  Q
    ||||    
T  462211 gggc 462214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 11687278 - 11687355
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  11687278 tttataaagaaataaaaataaacaaatatattcttttatgtcattttatatttatcagtcatttcaacaactaatttt 11687355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 31821830 - 31821687
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| ||||| || ||||||| ||||||||||||||||||||||||||||| ||||||| | |||||||||  ||| ||||| ||||| ||| |||||    
T  31821830 aaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgataagaagaagggtcaaggacattttt 31821731  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    ||||||      |||||||||| |||||| ||||| |||||||| ||||    
T  31821730 tatgtt-----ctgaaatgtgaagaaggatgtatgggtaatgcaagggc 31821687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 33750086 - 33750229
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| ||||| || |||||| |||||||||||||||||||||||||||||| |||| || | ||||||||| |||| | ||| ||||| |||||||||    
T  33750086 aaacttcaaaaatgtcagaatcatcggagatgatgatgattttggaggggtgaaaatgaaggaagttttagcgagaagaaaaagggtcaaggacgttttt 33750185  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     |||||       ||||||||| |||||||||||| |||||||||||||    
T  33750186 gatgtt-----cagaaatgtgaagaaggaggtatgggtaatgcaggggc 33750229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 31200873 - 31200947
Alignment:
Q  61 ggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||| || ||||||    
T  31200873 ggagatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaagagaaaagtcaaggatgttttt 31200947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 37525913 - 37525983
Alignment:
Q  232 gactttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||||| ||||||||||||| || ||||| |||||||||| ||||||||| ||||||||||||    
T  37525913 gactttttccaattgaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtataagacaaca 37525983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 45237330 - 45237266
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||| |||| |||||||||||||| |||||||||||||| ||||||||||||||||    
T  45237330 aaaattaaacaaacatgtccttttatgtcatttaatatttatcagtcacttcaacagctaatttt 45237266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 336 - 379
Target Start/End: Complemental strand, 38760352 - 38760309
Alignment:
Q  336 atatgtacttttatgtcattttatatttatcagtcatttcaaca 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38760352 atatgtacttttatgtcattttatatttatcagtcatttcaaca 38760309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 303
Target Start/End: Complemental strand, 1320850 - 1320780
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaacat 303  Q
    ||||||| ||||||||||||||||||| || ||||| |||||||||| ||||||||| || ||||||||||    
T  1320850 acttttttcaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacat 1320780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 303
Target Start/End: Complemental strand, 8654732 - 8654662
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaacat 303  Q
    ||||||||||||||||||||||||||| || ||||  |||||||||| ||||||||| || ||||||||||    
T  8654732 actttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtacaagacaacat 8654662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 9184792 - 9184694
Alignment:
Q  60 cggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgat 158  Q
    ||||||||||||||||||||||| |||||  |||  ||| |||||||||||||||||||   |||  ||||| ||| |||| |||||||||||||||||    
T  9184792 cggagatgatgatgattttggagaggtgaagatgatgaaggttttagcgggaaggagaaagatcatggacgtatttgatgtgtctgagtgaaatgtgat 9184694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 35011174 - 35011124
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  35011174 atgtacttttatgtcattttatatttatcattcatttcaaaagctaatttt 35011124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 35020968 - 35021018
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  35020968 atgtacttttatgtcattttatatttatcagccacttcaacagctaatttt 35021018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 12209350 - 12209413
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  12209350 aaaaataaacaagcatgttcttttatgtcattttatatttat-agtcacttcaacagctaatttt 12209413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 12453778 - 12453841
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  12453778 aaaaataaacaagcatgttcttttatgtcattttatatttat-agtcacttcaacagctaatttt 12453841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 31719378 - 31719442
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  31719378 aaaattaaacaagcatgttcttttatgtcattttatatttatcaatcacttcaacagctaatttt 31719442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 34900329 - 34900265
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||| | | ||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  34900329 aaaaataaagatacatgtacttttatgtcattttatatttatcacacatttcaaaagctaatttt 34900265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 35252604 - 35252540
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||||||||| |||||||| |||||||    
T  35252604 aaaattaaacaagcatgtccttttatgtcattttatatttatcagtcagttcaacagttaatttt 35252540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 11721481 - 11721584
Alignment:
Q  55 atcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatg 154  Q
    |||| ||||||||||||||||||||||| |||||  | || ||| |||||||||||||||||||   |||  ||||| ||| |||| || ||||||||||    
T  11721481 atcgccggagatgatgatgattttggagaggtgaagaaggtgaaggttttagcgggaaggagaaagatcagggacgtatttgatgtgtccgagtgaaatg 11721580  T
Q  155 tgat 158  Q
    ||||    
T  11721581 tgat 11721584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 42897663 - 42897734
Alignment:
Q  231 ggactttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||| | ||||||||||||| || ||||| |||||||||| ||||||||| || |||||||||    
T  42897663 ggactttttccaaataaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaaca 42897734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 40530176 - 40530226
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  40530176 atgtccttttatgtcattttatatttatcagccacttcaacagctaatttt 40530226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 34618442 - 34618491
Alignment:
Q  339 tgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  34618442 tgtacttttatgtcattttatatttatcagtcacttcaaaaactaatttt 34618491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 45236346 - 45236301
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  45236346 cttttatgtcattttatatttatcaatcacttcaacagctaatttt 45236301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 18146878 - 18146941
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  18146878 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 18146941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 39103734 - 39103671
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  39103734 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 39103671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 41356816 - 41356879
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  41356816 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 41356879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 462263 - 462330
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||| |||||||||||||||||| || ||||||  |||||||| ||||||||| ||||||| ||||    
T  462263 actttttcaaattcaatcaaattagtccttgaacact--gcttccttcttgccacgtgtataagataaca 462330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 25099635 - 25099585
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||||||||||||||||||||  | ||||||||||||||||    
T  25099635 atgtccttttatgtcattttatatttatcagctacttcaacagctaatttt 25099585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 38362561 - 38362611
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| |||||||||| ||||||| ||||||||    
T  38362561 atgtccttttatgtcattttatacttatcagtcacttcaacatctaatttt 38362611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 38745503 - 38745453
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  38745503 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 38745453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 39734706 - 39734756
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  39734706 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 39734756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 388
Target Start/End: Original strand, 5575267 - 5575332
Alignment:
Q  323 taaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| ||| ||| ||||  ||||||||||||||||| ||||||| || ||||||||||||||||    
T  5575267 taaaaaaaaaaaaaaatgtcattttatgtcattttatacttatcagccacttcaacagctaatttt 5575332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 17912055 - 17912010
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||    
T  17912055 cttttatgtcattttatattaatcagtcacttcaacaactaatttt 17912010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 32822593 - 32822524
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||| ||||||||||||||||||  | ||||| |||||||||| ||||||||  || |||||||||    
T  32822593 actttttcaaattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaaca 32822524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 35056837 - 35056788
Alignment:
Q  339 tgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||| |||||||||||||||||||||||||| ||  |||||||||    
T  35056837 tgtacttttctgtcattttatatttatcagtcattttaaacgctaatttt 35056788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 33160041 - 33160108
Alignment:
Q  235 tttttccaattcaatcaaattagtcattcaacacttg-gcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||| || ||||| || |||| ||| ||||||||| ||||||||||||    
T  33160041 tttttccaattcaatcaaattagtccttgaacacgtgagctt-cttcttgccacgtgtataagacaaca 33160108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 35437298 - 35437342
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||    
T  35437298 ttttatgtcattttatatttataagtcacttcaacggctaatttt 35437342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 40532574 - 40532617
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  40532574 ttttatgtcattttatatttat-agtcacttcaacagctaatttt 40532617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 43874506 - 43874549
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  43874506 ttttatgtcattttatatttat-agtcacttcaacagctaatttt 43874549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 388
Target Start/End: Complemental strand, 20696773 - 20696711
Alignment:
Q  325 aaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||| ||| |||| |||||||||||||||||| |||| || || ||||||||||||||||    
T  20696773 aaaataaa-aaacatgttcttttatgtcattttatacttattagccacttcaacagctaatttt 20696711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 33159952 - 33159995
Alignment:
Q  141 ttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    ||||||||||||||||| |||||||||||| || ||||||||||    
T  33159952 ttctgagtgaaatgtgaagaaggaggtatgggtgatgcaggggc 33159995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 388
Target Start/End: Original strand, 43150780 - 43150838
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||| |||| ||||||||||||||||||||||| ||||| || || ||||||||||    
T  43150780 taaacaaacatgtccttttatgtcattttatatttat-agtcacttaaagagctaatttt 43150838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 285140 - 285190
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || |||||||||| |||||    
T  285140 atgtccttttatgtcattttatacttatcagccacttcaacagctcatttt 285190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 630737 - 630687
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || |||||||||| |||||    
T  630737 atgtccttttatgtcattttatacttatcagccacttcaacagctcatttt 630687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 816549 - 816499
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || |||||||||| |||||    
T  816549 atgtccttttatgtcattttatacttatcagccacttcaacagctcatttt 816499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 3153858 - 3153808
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||| |||||||| ||||||| || ||||||||||||||||    
T  3153858 atgtccttttatgttattttatacttatcagccacttcaacagctaatttt 3153808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 386
Target Start/End: Complemental strand, 17155424 - 17155382
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatt 386  Q
    ||||||||||||||||| ||||||| || ||||||||||||||    
T  17155424 ttttatgtcattttatacttatcagccacttcaacagctaatt 17155382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 33750278 - 33750344
Alignment:
Q  236 ttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||||||||||| |||  | ||||| |||||||||| ||||||||  || |||||||||    
T  33750278 ttttccaattcaatcaaattcgtccctgaacacatggcttccttcttgccacgcgtacaagacaaca 33750344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 35397434 - 35397384
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| || |||| || ||||||||||||||||    
T  35397434 atgttcttttatgtcattttatacttctcagccacttcaacagctaatttt 35397384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 45069362 - 45069313
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  45069362 atgtccttttatgtcattttatatttat-agtcacttcaacaactaatttt 45069313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 182
Target Start/End: Complemental strand, 1320970 - 1320886
Alignment:
Q  95 agaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggg 182  Q
    |||| ||||||| || |||| |||  ||||| || |||||| |||||||||| ||||||||||   |||||||||| |||||||||||    
T  1320970 agaaagttttagtggaaaggtgaaaggtcaaagatgtttttgatgtttctgactgaaatgtga---aggaggtatgggtaatgcaggg 1320886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 5964773 - 5964724
Alignment:
Q  339 tgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||||||||||| | ||||| || |||||||    
T  5964773 tgtatttttatgtcattttatatttatcagttacttcaaaagttaatttt 5964724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 24804050 - 24804005
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| ||||||||||||||||||| || || |||||||||||||    
T  24804050 cttttacgtcattttatatttatcagccacttgaacagctaatttt 24804005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 31201034 - 31201103
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||| ||||||||||| |||  | ||||| || ||||||| |||||||| ||| |||||||||    
T  31201034 actttttccaaatcaatcaaattcgtccctgaacacatgacttccttcttgccacgcatacaagacaaca 31201103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 41670274 - 41670319
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  41670274 cttttatgtcattttatacttatcagccacttcaacaactaatttt 41670319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 4477160 - 4477117
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||    
T  4477160 ttttatgtctttttatatttat-agtcacttcaacagctaatttt 4477117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 14912452 - 14912492
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||| ||||||| || ||||||||||||||||    
T  14912452 atgtcattttatacttatcagccacttcaacagctaatttt 14912492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 372
Target Start/End: Complemental strand, 21266408 - 21266372
Alignment:
Q  336 atatgtacttttatgtcattttatatttatcagtcat 372  Q
    |||||||||||| |||| |||||||||||||||||||    
T  21266408 atatgtacttttctgtcgttttatatttatcagtcat 21266372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 25133721 - 25133765
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcag 368  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  25133721 aaaattaaacaaatatatcattttatgtcattttatatttatcag 25133765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 29050718 - 29050674
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcag 368  Q
    |||| |||||||  |||| ||||||||||||||||||||||||||    
T  29050718 aaaattaaacaagcatgtccttttatgtcattttatatttatcag 29050674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 36859939 - 36859983
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||| ||||||| || |||||||| |||||||    
T  36859939 ttttatgtcattttatacttatcagccacttcaacagttaatttt 36859983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 43800191 - 43800151
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||| ||||||||||||||| || ||||||||||||||||    
T  43800191 atgtccttttatatttatcagccacttcaacagctaatttt 43800151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 6e-50; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 38177784 - 38177936
Alignment:
Q  32 acaaaaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgt 131  Q
    |||| ||||| ||||||||||||||| ||| ||||||||||| |||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  38177784 acaacaacttcaaaaacgtgagaatcatcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcaggaaggagaagagtcaaggacgt 38177883  T
Q  132 tttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||||||||||||| ||||||||| |||||| ||||| |||||||||||||    
T  38177884 tttttatgtttctgagagaaatgtgaggaaggaagtatgggtaatgcaggggc 38177936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 38205008 - 38205160
Alignment:
Q  32 acaaaaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgt 131  Q
    |||| ||||| ||||||||||||||| ||| ||||||||||| |||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  38205008 acaacaacttcaaaaacgtgagaatcatcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcaggaaggagaagagtcaaggacgt 38205107  T
Q  132 tttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||||||||||||| ||||||||| |||||| ||||| |||||||||||||    
T  38205108 tttttatgtttctgagagaaatgtgaggaaggaagtatgggtaatgcaggggc 38205160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 35292083 - 35292231
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||  |||| || ||||||    
T  35292083 aaactttaaaaacgtgagaatcgccggagatgatgatgattttggagaggtgagaatggagaaagttttagggggaaggagaaggatcaaggatgttttt 35292182  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     ||||||||||||| ||||||| |||||||||||| ||||| |||||||    
T  35292183 gatgtttctgagtggaatgtgaggaaggaggtatgggtaatacaggggc 35292231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 32838236 - 32838352
Alignment:
Q  68 atgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatgaaggaggt 167  Q
    |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||    
T  32838236 atgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagagaaatgtgaggaaggaagt 32838335  T
Q  168 atgagtaatgcaggggc 184  Q
    ||| |||||||||||||    
T  32838336 atgggtaatgcaggggc 32838352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 35395752 - 35395609
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||| ||||| ||||| |||    
T  35395752 aaacttcaaaaatgtcagaatcgtcggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgggaagaagaagggtcaaggacgtgttt 35395653  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     |||||      |||||||||| |||||||||||| |||||||||||||    
T  35395652 gatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 35395609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 52 - 183
Target Start/End: Original strand, 18728320 - 18728446
Alignment:
Q  52 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaa 151  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||| |||| ||||| ||||| ||||||||| |||||      ||||    
T  18728320 agaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaagacgtttttgatgtt-----ctgaa 18728414  T
Q  152 atgtgatgaaggaggtatgagtaatgcagggg 183  Q
    |||||| |||||||||||| ||||||||||||    
T  18728415 atgtgaagaaggaggtatgggtaatgcagggg 18728446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 43317784 - 43317908
Alignment:
Q  51 gagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtga 150  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||| ||| |||||||| ||||| |         |||||| ||||||     
T  43317784 gagaatcgccggagatgatgatgattttggggaggtgagaatggagaaagttttaggggggaggagaagggtcaagg---------atgtttttgagtgg 43317874  T
Q  151 aatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    ||||||| |||||||||||| ||||| |||||||    
T  43317875 aatgtgaggaaggaggtatgggtaatacaggggc 43317908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 32087911 - 32087801
Alignment:
Q  61 ggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatga 160  Q
    |||||||||||||||||||||||||||  ||||||| | ||||||||| |||| ||||| ||||| ||||||||| |||||      |||||||||| ||    
T  32087911 ggagatgatgatgattttggaggggtggaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaaga 32087817  T
Q  161 aggaggtatgagtaat 176  Q
    |||||||||| |||||    
T  32087816 aggaggtatgggtaat 32087801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 36 - 179
Target Start/End: Complemental strand, 33256821 - 33256683
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| ||||| || | ||||| ||||||||||||||||||||||||||||| ||||||| | ||||||| | |||| ||||| ||||| | |||||||    
T  33256821 aaacttcaaaaatgtcaaaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagtgagaagaagaagtgtcaaggtcgttttt 33256722  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgca 179  Q
     |||||      || ||||||| |||||||||||| ||||||||    
T  33256721 gatgtt-----ctggaatgtgaagaaggaggtatgggtaatgca 33256683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 2890497 - 2890433
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||| | | |||||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  2890497 aaaaataaagacacatgtacttttatgtcattttatatttatcactcatttcaaaagcaaatttt 2890433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 388
Target Start/End: Complemental strand, 3747234 - 3747172
Alignment:
Q  326 aaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||| ||| |||| ||||||||||||||||||| |||||| |||||||||| ||||||||    
T  3747234 aaataaataaacatgtccttttatgtcattttatatgtatcagccatttcaacaactaatttt 3747172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 388
Target Start/End: Complemental strand, 5102233 - 5102171
Alignment:
Q  326 aaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||| ||| |||| |||||||||||||||||||||||||| || ||||||| ||||||||    
T  5102233 aaataaataaacatgtccttttatgtcattttatatttatcagccacttcaacaactaatttt 5102171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 15499355 - 15499405
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  15499355 atgtccttttatgtcattttatatttatcagccacttcaacagctaatttt 15499405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 18728496 - 18728562
Alignment:
Q  236 ttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||  | ||||| |||||||||| ||||||||| || |||||||||    
T  18728496 ttttccaattcaatcaaattagtcccttaacacgtggcttccttcttgccacgtgtacaagacaaca 18728562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 29524744 - 29524694
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  29524744 atgtccttttatgtcattttatatttatcagccacttcaacagctaatttt 29524694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 37530125 - 37530075
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  37530125 atgtccttttatgtcattttatatttatcagccacttcaacagctaatttt 37530075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 15525034 - 15525079
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  15525034 cttttatgtcattttatatttatcagtcacttcaacatctaatttt 15525079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 11783621 - 11783557
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||| ||| ||| |||| |||||||||||||||||| ||||||| |||||| ||||||||||||    
T  11783621 aaaaaaaaaaaaacatgtccttttatgtcattttatacttatcagccatttcgacagctaatttt 11783557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 388
Target Start/End: Original strand, 12282325 - 12282388
Alignment:
Q  325 aaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||| ||| |||| |||||||||||||||||| |||||||  ||||||||||||||||||    
T  12282325 aaaaaaaaaaaacatgtccttttatgtcattttatacttatcagctatttcaacagctaatttt 12282388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 388
Target Start/End: Complemental strand, 12953247 - 12953184
Alignment:
Q  325 aaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||| ||||||||  ||||||||||||||||| ||||||| || ||||||| ||||||||    
T  12953247 aaaataaaaaaatatgtctttttatgtcattttatacttatcagccacttcaacaactaatttt 12953184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 6788993 - 6788943
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  6788993 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 6788943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 13019542 - 13019591
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  13019542 atgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 13019591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 27812433 - 27812383
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| |||||||||| || |||||||||||||    
T  27812433 atgtccttttatgtcattttatacttatcagtcactttaacagctaatttt 27812383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 302
Target Start/End: Complemental strand, 32087744 - 32087678
Alignment:
Q  236 ttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||  | ||||| |||||||||| ||||||||  || |||||||||    
T  32087744 ttttccaattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaaca 32087678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 42709999 - 42710049
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  42709999 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 42710049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 34589298 - 34589253
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||    
T  34589298 cttttatgtcattttatacttatcagccacttcaacagctaatttt 34589253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 35395564 - 35395495
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||||||||||||||||||  | ||||  |||||||||| ||||||||  || |||||||||    
T  35395564 actttttccaattcaatcaaattagtccctgaacatgtggcttccttcttgccacgcgtacaagacaaca 35395495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 36761834 - 36761879
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||    
T  36761834 cttttatgtcattttatacttatcagccacttcaacagctaatttt 36761879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 4559015 - 4558963
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttca 376  Q
    |||| |||||||| |||| ||||||||||||||||||||||||| ||| ||||    
T  4559015 aaaattaaacaaacatgttcttttatgtcattttatatttatcactcacttca 4558963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 7156856 - 7156816
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  7156856 atgtcattttatattaatcagtcacttcaacagctaatttt 7156816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 20768411 - 20768368
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  20768411 ttttatgtcattttatatttat-agtcacttcaacagctaatttt 20768368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 23591353 - 23591397
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||    
T  23591353 ttttatgtcattttatacttatcagacacttcaacagctaatttt 23591397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 24172061 - 24172101
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  24172061 atgtcattttatacttatcagtcacttcaacagctaatttt 24172101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 388
Target Start/End: Complemental strand, 41733703 - 41733643
Alignment:
Q  328 ataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||| ||| |||| |||||||||||||||||| |||||||| | |||||||| |||||||    
T  41733703 ataaaaaaacatgtccttttatgtcattttatacttatcagttacttcaacagttaatttt 41733643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 5049616 - 5049550
Alignment:
Q  322 ataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||| | ||||||||||||||||||||| | |||| | |||||| || || |||||||    
T  5049616 ataaaaataaacatacatgtacttttatgtcattttaaacttattactcattttaaaagttaatttt 5049550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 388
Target Start/End: Complemental strand, 7947981 - 7947912
Alignment:
Q  318 agaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||| |||| |||||||  | || ||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  7947981 agaaaaaaaattaaacaagcacgtccttttatgtcattttatatttat-agtcacttcaacaactaatttt 7947912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 16217723 - 16217678
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  16217723 cttttatgtcattttatacttatcagccacttcaacaactaatttt 16217678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 25882067 - 25882116
Alignment:
Q  339 tgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||| ||||||||||||||||||||||| || ||  |||||||||    
T  25882067 tgtacttttctgtcattttatatttatcagtcactttaaacgctaatttt 25882116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 38177984 - 38178053
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||| ||| |||||||| |||||| || ||||| || |||||||||||| |||| || |||||||||    
T  38177984 acttttttcaaatcaatcaagttagtccttgaacacgtgacttcctttttgctacgtgtacaagacaaca 38178053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 38205208 - 38205277
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||| ||| |||||||| |||||| || ||||| || |||||||||||| |||| || |||||||||    
T  38205208 acttttttcaaatcaatcaagttagtccttgaacacgtgacttcctttttgctacgtgtacaagacaaca 38205277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 364
Target Start/End: Original strand, 11576120 - 11576148
Alignment:
Q  336 atatgtacttttatgtcattttatattta 364  Q
    |||||||||||||||||||||||||||||    
T  11576120 atatgtacttttatgtcattttatattta 11576148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 12939143 - 12939099
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||| ||||||| || ||||||| ||||||||    
T  12939143 ttttatgtcattttatacttatcagccacttcaacaactaatttt 12939099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 35639489 - 35639529
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||| ||||||| || ||||||||||||||||    
T  35639489 atgtcattttatacttatcagccacttcaacagctaatttt 35639529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 39818661 - 39818617
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttatcagtcatt 373  Q
    |||||| || |||||||| |||||||||||||||||||| |||||    
T  39818661 taaacatatgtgtactttcatgtcattttatatttatcaatcatt 39818617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 364
Target Start/End: Original strand, 41356788 - 41356816
Alignment:
Q  336 atatgtacttttatgtcattttatattta 364  Q
    |||||||||||||||||||||||||||||    
T  41356788 atatgtacttttatgtcattttatattta 41356816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 43317953 - 43318005
Alignment:
Q  235 tttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccac 287  Q
    |||||||| ||  |||||||||||| || ||||| ||||||||||||||||||    
T  43317953 tttttccactttcatcaaattagtccttgaacacgtggcttcctttttgccac 43318005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 43347891 - 43347827
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||| | || |||||||||||||||||||| |||| | |||||| || | ||||||||    
T  43347891 aaaaataaacatacatatacttttatgtcattttatacttataactcattttaaaaactaatttt 43347827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 6e-50; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 27625218 - 27625070
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||| |||||||||||||||    
T  27625218 aaacttcaaaaacgtcagaatcatcggagatgatgatgattttggaggggtgagaatggataaagttttagtgggaaggagaagggtcaatgacgttttt 27625119  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    ||| ||||||| |||||| ||| |||||||||||| |||||||||||||    
T  27625118 tatttttctgactgaaatctgaagaaggaggtatgggtaatgcaggggc 27625070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 35996490 - 35996343
Alignment:
Q  37 aactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgtttttt 136  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  | ||||||     
T  35996490 aacttcaaaaacgtcagaatcggcggagatgatgatgattttggaggggtgagactggagaaagttttagcgggaaggagaagagtcaaatatgtttttg 35996391  T
Q  137 atgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||||||| |||||||||| |||||||| ||  |||||||||||||    
T  35996390 atgtttctgactgaaatgtgaagaaggaggaatatgtaatgcaggggc 35996343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 4519785 - 4519656
Alignment:
Q  47 acgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctga 146  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||| || |||||| ||||||||||    
T  4519785 acgtgacaatcgccggagatgatgatgattttggagaggtgagaatggagaaagttttagcgggaagaagaagggtcaaggatgtttttgatgtttctga 4519686  T
Q  147 gtgaaatgtgatgaaggaggtatgagtaat 176  Q
    ||||||||||| ||||||||||||||||||    
T  4519685 gtgaaatgtgaggaaggaggtatgagtaat 4519656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 52 - 184
Target Start/End: Original strand, 51041645 - 51041777
Alignment:
Q  52 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagc-gggaaggagaagagtcaatgacgttttttatgtttctgagtga 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  51041645 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaaagctttagcggggaaggagaagggtcaatgacgtttttgatgtttctgagtga 51041744  T
Q  151 aatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    ||||||| ||| | |||||| |||||||||||||    
T  51041745 aatgtgaagaaag-ggtatgggtaatgcaggggc 51041777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 2350208 - 2350355
Alignment:
Q  37 aactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgtttttt 136  Q
    ||||| |||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||     
T  2350208 aacttcaaaaacgtcagaatcgccggagatgattatgattttggaggggtgagaatggagaaagttttagtgggaaggagaagagtcaaggatgtttttg 2350307  T
Q  137 atgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||||| | |||||||||| |||||||| ||  |||||||||||||    
T  2350308 atgtttctaactgaaatgtgaagaaggaggaatatgtaatgcaggggc 2350355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 52 - 184
Target Start/End: Original strand, 10372388 - 10372520
Alignment:
Q  52 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaa 151  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||| |||||||| ||| ||    
T  10372388 agaatcgatggagatgatgatgattttggaggggtgacaatggagaatgttttagcgggaaggagaagagtcaaggatgtttttgatgtttctaagtaaa 10372487  T
Q  152 atgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||| |||||||| ||  |||||||||||||    
T  10372488 atgtgaagaaggaggaatatgtaatgcaggggc 10372520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 36 - 183
Target Start/End: Original strand, 44558188 - 44558335
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| |||||| ||| ||||||||||||||||||||||||||||||||| |  ||||||| |||||||||||| ||||| |||||||||    
T  44558188 aaacttcaaaaacgtcagaatcatcgaagatgatgatgattttggaggggtgagaatggatagagttttagtgggaaggagaagggtcaaggacgttttt 44558287  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcagggg 183  Q
     || ||||||| |||||||| | |||||||||||| ||||||||||||    
T  44558288 gatttttctgactgaaatgtaaagaaggaggtatgggtaatgcagggg 44558335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 52 - 184
Target Start/End: Complemental strand, 10762993 - 10762861
Alignment:
Q  52 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaa 151  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||| |||||||||||| ||    
T  10762993 agaatcgatggagatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgagtaaa 10762894  T
Q  152 atgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||| |||| ||| ||  |||||||||||||    
T  10762893 atgtgaagaagaaggaatatgtaatgcaggggc 10762861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 44794481 - 44794604
Alignment:
Q  61 ggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatga 160  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||| |||||||||||| |||||||| ||    
T  44794481 ggagattatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagtcaaagatgtttttaatgtttctgagtaaaatgtgaaga 44794580  T
Q  161 aggaggtatgagtaatgcaggggc 184  Q
    |||||| ||  |||||||||||||    
T  44794581 aggaggaatatgtaatgcaggggc 44794604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 24153214 - 24153291
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24153214 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 24153291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 388
Target Start/End: Complemental strand, 21234245 - 21234168
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  21234245 tttataaagaaataaaaataaacaaatatatacttttatgtcattttatatttatcagtcatttcaacagttaatttt 21234168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 2827826 - 2827683
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| ||||| || ||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||| |||| ||||| ||||| |||||||||    
T  2827826 aaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgttttt 2827727  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     || ||||    |||||||||  |||||||||||| |||||||||||||    
T  2827726 gat-tttc----tgaaatgtggagaaggaggtatgggtaatgcaggggc 2827683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 51041821 - 51041891
Alignment:
Q  232 gactttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||||||||||||||||||| || ||||  |||||||||| ||||||||| ||||||||||||    
T  51041821 gactttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtataagacaaca 51041891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 35996295 - 35996227
Alignment:
Q  234 ctttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||||||||||||||||| || ||||| |||||||||| ||||||||| || |||||||||    
T  35996295 ctttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaaca 35996227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 52575544 - 52575494
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  52575544 atgtacttttatgtcattttatatttatcattcatttcaaaagctaatttt 52575494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 2350395 - 2350451
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgt 289  Q
    ||||||||||||||||||||||||||| || ||||| |||||||||| |||||||||    
T  2350395 actttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgt 2350451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 388
Target Start/End: Complemental strand, 45109170 - 45109111
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| || ||||||||||||||||||||||||| | ||||||||||| ||||||||||    
T  45109170 taaacacatgtgtacttttatgtcattttatattttttagtcatttcaaaagctaatttt 45109111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 19801242 - 19801192
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  19801242 atgtccttttatgtcattttatatttatcagccacttcaacagctaatttt 19801192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 49647963 - 49647918
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||    
T  49647963 cttttatgtcattttatacttatcagccatttcaacagctaatttt 49647918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 19914111 - 19914174
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  19914111 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 19914174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 20530564 - 20530500
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||| |||| |||||| |||||||||||||||| ||||| |||||| |||||||||    
T  20530564 aaaattaaacaaacatgttcttttaggtcattttatatttattagtcacttcaaccgctaatttt 20530500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 33984761 - 33984825
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||| ||| ||| |||| ||||| |||||||||||| ||||||| |||||||||||||||||||    
T  33984761 aaaaaaaaaaaaacatgtccttttgtgtcattttatacttatcagccatttcaacagctaatttt 33984825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 49334594 - 49334550
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||| || ||||||||||||||||    
T  49334594 ttttatgtcattttatatttatcagccacttcaacagctaatttt 49334550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 388
Target Start/End: Original strand, 44449130 - 44449193
Alignment:
Q  325 aaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||| ||| |||| |||||||||||||||||| |||||||  ||||||||||||||||||    
T  44449130 aaaaaaaaaaaacatgtccttttatgtcattttatacttatcagctatttcaacagctaatttt 44449193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 388
Target Start/End: Complemental strand, 44587744 - 44587685
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| || ||||||||||||||||||||||||||||| ||| ||||| | ||||||||    
T  44587744 taaacatatgtgtacttttatgtcattttatatttatcaatcacttcaaaatctaatttt 44587685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 6244974 - 6245024
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  6244974 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 6245024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 10656846 - 10656896
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||||||||||||||||||||||| ||||| | ||||||||    
T  10656846 atgtccttttatgtcattttatatttatcagtcacttcaatatctaatttt 10656896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 10658099 - 10658049
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| |||||||||| ||||||| ||||||||    
T  10658099 atgtccttttatgtcattttatacttatcagtcacttcaacaactaatttt 10658049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 10870991 - 10871041
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||||||||||||||||||||||| ||||| | ||||||||    
T  10870991 atgtccttttatgtcattttatatttatcagtcacttcaatatctaatttt 10871041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 10872244 - 10872194
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| |||||||||| ||||||| ||||||||    
T  10872244 atgtccttttatgtcattttatacttatcagtcacttcaacaactaatttt 10872194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 47633268 - 47633218
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  47633268 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 47633218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 53284684 - 53284734
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||||||||||| || ||||||| ||||||||    
T  53284684 atgtccttttatgtcattttatatttatcagccacttcaacaactaatttt 53284734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 28779122 - 28779171
Alignment:
Q  339 tgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||| |||||||||||||||||||||||||| ||  |||||||||    
T  28779122 tgtacttttctgtcattttatatttatcagtcattttaaacgctaatttt 28779171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 44558384 - 44558453
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||| ||||||||||||| |||| || ||||| |||||||||| ||||||||  || |||||||||    
T  44558384 actttttcaaattcaatcaaatgagtccttgaacacgtggcttccttcttgccacgcgtacaagacaaca 44558453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 26919394 - 26919350
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||    
T  26919394 ttttatgtcattttatacttatcagtcacttcaacatctaatttt 26919350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 28460168 - 28460211
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  28460168 ttttatgtcattttatatttat-agtcacttcaacagctaatttt 28460211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 30410791 - 30410748
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  30410791 ttttatgtcattttatatttat-agtcacttcaacagctaatttt 30410748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 30654040 - 30654103
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| | ||| ||||||||||||||||    
T  30654040 aaaattaaacaagcatgtccttttatgtcattttatatttat-actcacttcaacagctaatttt 30654103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 31998364 - 31998427
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| |||||||||||||||||||||||||| || || |||||||||||||    
T  31998364 aaaattaaacaagcatgtccttttatgtcattttatatttatcagccactt-aacagctaatttt 31998427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 55611199 - 55611262
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| || |||||||||||||    
T  55611199 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcactttaacagctaatttt 55611262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 25993902 - 25993847
Alignment:
Q  63 agatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaa 118  Q
    |||||||||||||||||||| |||||  |||| ||| ||||| |||||||||||||    
T  25993902 agatgatgatgattttggagaggtgaagatggtgaaggttttggcgggaaggagaa 25993847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 41579537 - 41579604
Alignment:
Q  322 ataaaaataaaca-aatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||| | || |||| |||||| |||||||||||||||||||||| ||||||  ||||||||    
T  41579537 ataaaaataaaaataaaatgtccttttacgtcattttatatttatcagtcacttcaacgactaatttt 41579604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 47942044 - 47941989
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacg 288  Q
    ||||||||||| ||||||||||| ||| || ||||| |||||||||| ||||||||    
T  47942044 actttttccaaatcaatcaaattcgtccttgaacacgtggcttccttcttgccacg 47941989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 374
Target Start/End: Original strand, 54687450 - 54687485
Alignment:
Q  339 tgtacttttatgtcattttatatttatcagtcattt 374  Q
    ||||||||| ||||||||||||||||||||||||||    
T  54687450 tgtacttttctgtcattttatatttatcagtcattt 54687485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 302
Target Start/End: Complemental strand, 2827634 - 2827568
Alignment:
Q  236 ttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||| |||||||||||||||||||  | ||||| |||||||||| ||||||||  || |||||||||    
T  2827634 tttttcaattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaaca 2827568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 19802524 - 19802574
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  19802524 atgtccttttatgtcattttatacttatcagccacttcaacaactaatttt 19802574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Original strand, 28258421 - 28258451
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgt 341  Q
    |||||||||||||||||||||||||||||||    
T  28258421 tttataaagaaataaaaataaacaaatatgt 28258451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 39839541 - 39839491
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||| |||||||| ||||||| || ||||||||||||||||    
T  39839541 atgtccttttatgttattttatacttatcagccacttcaacagctaatttt 39839491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 43375318 - 43375368
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  43375318 atgtccttttatgtcattttatacttatcagccacttcaacaactaatttt 43375368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 43939526 - 43939476
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  43939526 atgtccttttatgtcattttatacttatcagccacttcaacaactaatttt 43939476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 45560059 - 45560009
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  45560059 atgtccttttatgtcattttatacttatcagccacttcaacaactaatttt 45560009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 55661121 - 55661170
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||||||||||||||||| ||||||||||| || |||||||    
T  55661121 atgtccttttatgtcattttatatttat-agtcatttcaaaagttaatttt 55661170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 2943051 - 2943010
Alignment:
Q  347 tatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| ||||||| ||||||| |||||||||||||||||||    
T  2943051 tatgtccttttatacttatcagccatttcaacagctaatttt 2943010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 379
Target Start/End: Complemental strand, 26188936 - 26188895
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaaca 379  Q
    |||| |||||||||||||||||| |||||||||| |||||||    
T  26188936 atgttcttttatgtcattttatacttatcagtcacttcaaca 26188895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 287
Target Start/End: Complemental strand, 27625030 - 27624985
Alignment:
Q  242 aattcaatcaaattagtcattcaacacttggcttcctttttgccac 287  Q
    |||||||||||||||||| || ||||| |||||||||| |||||||    
T  27625030 aattcaatcaaattagtccttgaacacgtggcttccttcttgccac 27624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 37498766 - 37498810
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||    
T  37498766 cttttatgtcattttatatttatcag-cacttcaacaactaatttt 37498810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 47093465 - 47093522
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcag 368  Q
    |||||||| ||  ||||||||||||| || |  |||||||||||||||||||||||||    
T  47093465 tttataaaaaataaaaaataaacaaacatatctttttatgtcattttatatttatcag 47093522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 317994 - 317950
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||| |||||||||| |||||||  |||||||    
T  317994 ttttatgtcattttatacttatcagtcacttcaacaattaatttt 317950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 7896041 - 7896001
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaac 378  Q
    ||||| ||||||||||||||||||| |||||||| ||||||    
T  7896041 atgtatttttatgtcattttatattaatcagtcacttcaac 7896001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 13450728 - 13450788
Alignment:
Q  55 atcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaagga 115  Q
    |||||||||||||| ||||||||||||| |||||  || | ||| ||||||| ||||||||    
T  13450728 atcgtcggagatgaggatgattttggagaggtgaagatagtgaaggttttagagggaagga 13450788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 25697515 - 25697559
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||| ||||||||||||||||||| || || |||||||||||||    
T  25697515 ttttacgtcattttatatttatcagccacttaaacagctaatttt 25697559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 31220646 - 31220686
Alignment:
Q  348 atgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||| ||||||| ||||||||    
T  31220646 atgtcattttatatttatgagtcacttcaacaactaatttt 31220686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 32013076 - 32013120
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||| |||||||||| || |||| ||||||||    
T  32013076 ttttatgtcattttatacttatcagtcactttaacaactaatttt 32013120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 33434308 - 33434344
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttat 365  Q
    |||||| | ||||||||||||||||||||||||||||    
T  33434308 taaacatacatgtacttttatgtcattttatatttat 33434344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 364
Target Start/End: Original strand, 38006112 - 38006140
Alignment:
Q  336 atatgtacttttatgtcattttatattta 364  Q
    |||||||||||||||||||||||||||||    
T  38006112 atatgtacttttatgtcattttatattta 38006140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 45550186 - 45550249
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| |||||||||| |||||||||||| ||||| ||||| ||||||||||    
T  45550186 aaaattaaacaagcatgtccttttatgtctttttatatttat-agtcacttcaagagctaatttt 45550249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 4e-45; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 37417710 - 37417558
Alignment:
Q  32 acaaaaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgt 131  Q
    |||| ||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||||| |||||    
T  37417710 acaacaacttcaaaaacgtgagaatcgtcgaagatgatgatggttttggagaggtgagaatggagacagttttagcgggaaggagaagagtcaaggacgt 37417611  T
Q  132 tttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||| ||||||||||| ||||||||| | |||| ||||| |||||||| ||||    
T  37417610 ttttgatgtttctgagagaaatgtgagggaggaagtatgggtaatgcacgggc 37417558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 61 - 184
Target Start/End: Complemental strand, 39926 - 39803
Alignment:
Q  61 ggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatga 160  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||| |||||||||| | |||||||| ||    
T  39926 ggagatgatgatgattttggaggggtgagaatggagaaagttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgactaaaatgtgaaga 39827  T
Q  161 aggaggtatgagtaatgcaggggc 184  Q
    |||||| ||  |||||||||||||    
T  39826 aggaggaatatgtaatgcaggggc 39803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 15372902 - 15372780
Alignment:
Q  61 ggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatga 160  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||    
T  15372902 ggagatgatgatgattttggagggttgacaatggagaacgttttagcgggaaggagaagagtcaatgatgtttttgatgtttctgagtaaaatgtgaaga 15372803  T
Q  161 aggaggtatgagtaatgcagggg 183  Q
    |||||| ||  ||||||||||||    
T  15372802 aggaggaatatgtaatgcagggg 15372780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 42879748 - 42879595
Alignment:
Q  32 acaaaaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacg- 130  Q
    |||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||||||||||||||| ||||||||  ||| |||||||||||| ||||     
T  42879748 acaacaacttcaaaaacgtgagaatcgttgaagatgatgatggttttggagaggtgagaatggagaaagttttagcaagaaagagaagagtcaaggacgt 42879649  T
Q  131 ttttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    ||||||||||||||||| ||||||||| |||||| ||||| |||||||| ||||    
T  42879648 ttttttatgtttctgagagaaatgtgaggaaggaagtatgggtaatgcatgggc 42879595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 42002036 - 42001893
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| | ||||| |||||||||||||| |||||||||||||| ||||| ||| ||||||||||||||||||||  ||||||| ||||||    
T  42002036 aaacttcaaaaacgtaataatcgccggagatgatgatg-ttttggaggggtgataatggggaaagttttagcgggaaggagaaggatcaatgatgttttt 42001938  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcag 180  Q
     |||||||||| |||||||||| |||||||||||| |||||||||    
T  42001937 gatgtttctgactgaaatgtgaagaaggaggtatgggtaatgcag 42001893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 45377438 - 45377515
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45377438 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 45377515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 25620049 - 25619943
Alignment:
Q  78 tggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatg 177  Q
    ||||||||||||||||||||| |||||| ||  ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  25620049 tggaggggtgagaatggagaaagttttatcgaaaaggagaagggtcaaggacgttttttatgtttctgagtgaaatgtgaagaaggaggtatgggtaatg 25619950  T
Q  178 caggggc 184  Q
    |||||||    
T  25619949 caggggc 25619943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 15432753 - 15432606
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||||| ||| |||| |||||||||||| |  | ||| || ||||||    
T  15432753 aaacttcaaaaacgtcagaatcgccggtgatgatgatgattttggaggggtgagaatggtgaaagtttgagcgggaaggaggaaggccaaagatgttttt 15432654  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     |||||||||| |||||||||| ||||| ||||||||||||| ||||||    
T  15432653 gatgtttctgactgaaatgtgaagaagg-ggtatgagtaatgtaggggc 15432606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 6432921 - 6432998
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  6432921 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcaatcatttcaacaactaatttt 6432998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 40789517 - 40789594
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  40789517 tttataaataaataaaaataaacaaatatgtaattttatgttattttatatttatcagtcatttcaacagctaatttt 40789594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 184
Target Start/End: Original strand, 39116 - 39243
Alignment:
Q  52 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaa 151  Q
    |||||||||||| |||||||||||||||||||||||| ||||||| | || |||||| |||| ||||| ||||| |||||||||||||||      ||||    
T  39116 agaatcgtcggacatgatgatgattttggaggggtgaaaatggaggaagtattagcgagaagaagaagggtcaaggacgttttttatgtt-----ctgaa 39210  T
Q  152 atgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||| |||||||||||| |||||||||||||    
T  39211 atgtgaagaaggaggtatgggtaatgcaggggc 39243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 36 - 179
Target Start/End: Original strand, 29909364 - 29909502
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| ||||||  ||||||||||||| ||||||||||||||| ||||||| | |||||||||||||| ||||| ||||| |||||||||    
T  29909364 aaacttcaaaaacgtcagaatcaccggagatgatgataattttggaggggtgaaaatggaggaagttttagcgggaagaagaagggtcaaggacgttttt 29909463  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgca 179  Q
     |||||      |||||||||| |||||||||||| ||||||||    
T  29909464 gatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgca 29909502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 92049 - 92193
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacg-tttt 134  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||||| | || |||||| |||| ||||| ||||| |||| ||||    
T  92049 aaacttcaaaaatgtcagaatcgtcggagatgatgatgattttggaggggtgaaaatggaggaagtattagcgagaagaagaagggtcaaggacgttttt 92148  T
Q  135 ttatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||||      |||||||||| |||||||||||| |||||||| ||||    
T  92149 ttatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaagggc 92193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 41706933 - 41706859
Alignment:
Q  61 ggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || ||||||    
T  41706933 ggagatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagtcaaggatgttttt 41706859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 15432561 - 15432492
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||||||||||||||||| || ||||| || ||||||| ||||||||| || |||||||||    
T  15432561 actttttccaattcaatcaaattagtccttgaacacatgacttccttcttgccacgtgtacaagacaaca 15432492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 10245832 - 10245769
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  10245832 aaaattaaacaagaatgtccttttatgtcattttatatttat-agtcatttcaacagctaatttt 10245769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 37241725 - 37241789
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||| ||||  |||||| |||||||||||||||||||||| ||||||||||||||||    
T  37241725 aaaattaaacaagtatgctcttttacgtcattttatatttatcagtcacttcaacagctaatttt 37241789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 37417508 - 37417437
Alignment:
Q  231 ggactttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||||| ||||| ||||||||| || ||||| |||||||||| ||||||||| || |||||||||    
T  37417508 ggactttttccaaatcaattaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaaca 37417437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 7455211 - 7455261
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  7455211 atgtccttttatgtcattttatatttatcagccacttcaacagctaatttt 7455261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 14452951 - 14453001
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  14452951 atgtacttttatgtcattttatatttatcagccacttcaacatctaatttt 14453001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 334 - 388
Target Start/End: Original strand, 34246022 - 34246076
Alignment:
Q  334 aaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| | |||||||||||||||||||||||||| || ||||||||||||||||    
T  34246022 aaatatatccttttatgtcattttatatttatcagccacttcaacagctaatttt 34246076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 1875388 - 1875344
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||| || ||||||||||||||||    
T  1875388 ttttatgtcattttatatttatcagccacttcaacagctaatttt 1875344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 25619893 - 25619825
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaac 301  Q
    ||||||| ||||||||||||||||||| || ||||  ||||||| || ||||||||| |||||||||||    
T  25619893 acttttttcaattcaatcaaattagtccttgaacatgtggcttctttcttgccacgtgtataagacaac 25619825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 36935469 - 36935421
Alignment:
Q  340 gtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  36935469 gtacttttatgtcattttatacttatcagccacttcaacagctaatttt 36935421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 40861762 - 40861699
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  40861762 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 40861699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 388
Target Start/End: Complemental strand, 18109263 - 18109209
Alignment:
Q  333 caaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  18109263 caaacatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 18109209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 388
Target Start/End: Original strand, 30219067 - 30219126
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| || |||||||||| |||||||||||||||||||||| ||||| || |||||||    
T  30219067 taaacatatgtgtacttttaggtcattttatatttatcagtcacttcaaaagttaatttt 30219126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 6321450 - 6321400
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  6321450 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 6321400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 16495996 - 16495946
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||| ||| ||||||||||||||||||||| ||||||||||||||||    
T  16495996 atgtccttatatatcattttatatttatcagtcacttcaacagctaatttt 16495946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 15264896 - 15264851
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||| |||||||||||| |||||||| ||||||||||||||||    
T  15264896 cttttatatcattttatattaatcagtcacttcaacagctaatttt 15264851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 18247380 - 18247425
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||    
T  18247380 cttttatgtcattttatacttatcagtcacttcaacaactaatttt 18247425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 29909551 - 29909620
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||| ||||||||||||||||||  | ||||| |||||||||| ||||||||  || |||||||||    
T  29909551 actttttcaaattcaatcaaattagtcccttaacacgtggcttccttcttgccacgcgtacaagacaaca 29909620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 36986042 - 36985997
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||    
T  36986042 cttttatgtcattttatacttatcagccacttcaacagctaatttt 36985997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 1086572 - 1086636
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||| | || |||||| ||||||| |||||||||||||| ||||||| ||||||||    
T  1086572 aaaattaaacaaacacgtccttttacgtcatttaatatttatcagtcacttcaacaactaatttt 1086636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 7182842 - 7182779
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  7182842 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacaactaatttt 7182779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 7454052 - 7454009
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  7454052 ttttatgtcattttatatttat-agtcacttcaacagctaatttt 7454009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 11447776 - 11447840
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| |||||||||||||||||||||||||  || |||||||| |||||||    
T  11447776 aaaattaaacaagcatgtccttttatgtcattttatatttatcaaccacttcaacagttaatttt 11447840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 18240033 - 18240085
Alignment:
Q  336 atatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| |||||||||||||||||| ||||||| || | ||||||||||||||    
T  18240033 atatgtccttttatgtcattttatacttatcagccactccaacagctaatttt 18240085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 38325015 - 38325059
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||    
T  38325015 ttttatgtcattttatacttatcagccacttcaacagctaatttt 38325059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 42520468 - 42520531
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||| ||| |||| |||||||||||||||||| || |||| || ||||||||||||||||    
T  42520468 aaaaataaa-aaacatgtccttttatgtcattttatacttgtcagccacttcaacagctaatttt 42520531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 11315064 - 11315127
Alignment:
Q  55 atcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaa 118  Q
    ||||| |||||||||||||||||||||| |||||  |||  ||| |||||||| ||||||||||    
T  11315064 atcgttggagatgatgatgattttggagaggtgaagatgatgaaggttttagcaggaaggagaa 11315127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 368
Target Start/End: Original strand, 27865529 - 27865568
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttatcag 368  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  27865529 taaagaaatatgttcttttatgtcattttatatttatcag 27865568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 39291 - 39357
Alignment:
Q  236 ttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    |||||||||||||||||||| |||  | ||||| |||||||||| ||||||||  || |||||||||    
T  39291 ttttccaattcaatcaaatttgtccctgaacacgtggcttccttcttgccacgcgtacaagacaaca 39357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 14958786 - 14958836
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  14958786 atgtccttttatgtcattttatacttatcagccacttcaacaactaatttt 14958836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 20941128 - 20941034
Alignment:
Q  63 agatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtga 157  Q
    ||||| |||||||||||||| | |||   | | ||| |||||||||| ||||||||||||||  ||| | ||| |||| ||||||||||||||||    
T  20941128 agatggtgatgattttggagagatgaagtttgtgaaggttttagcggaaaggagaagagtcagagacttgtttgatgtgtctgagtgaaatgtga 20941034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 33179622 - 33179672
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||  || ||||||||||||||||    
T  33179622 atgtccttttatgtcattttatacttatcaaccacttcaacagctaatttt 33179672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 40097956 - 40097894
Alignment:
Q  56 tcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaa 118  Q
    |||| |||||||||||||||||||||| |||||  |||  ||| ||| |||||||||||||||    
T  40097956 tcgttggagatgatgatgattttggagaggtgaagatgatgaaggttctagcgggaaggagaa 40097894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 42001840 - 42001774
Alignment:
Q  235 tttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaac 301  Q
    |||||||||||||||||||| |||| || ||||| || ||||||| ||| ||||| || ||||||||    
T  42001840 tttttccaattcaatcaaatcagtccttgaacacgtgacttccttcttgtcacgtgtacaagacaac 42001774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 3147981 - 3148030
Alignment:
Q  339 tgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||| |||||||||||||||||||||||||| ||  |||||||||    
T  3147981 tgtatttttctgtcattttatatttatcagtcattttaaacgctaatttt 3148030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 4416684 - 4416765
Alignment:
Q  60 cggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtt 141  Q
    ||||||||||||||||||||||| |||||  |||  ||| | |||||||| ||||||||  ||||  ||||||||| |||||    
T  4416684 cggagatgatgatgattttggagaggtgaagatgatgaaggatttagcggaaaggagaaaggtcagggacgtttttgatgtt 4416765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 5774778 - 5774823
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  5774778 cttttatgtcattttatacttatcagccacttcaacaactaatttt 5774823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 30524351 - 30524396
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  30524351 cttttatgtcattttatacttatcagccacttcaacaactaatttt 30524396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 364
Target Start/End: Complemental strand, 240077 - 240049
Alignment:
Q  336 atatgtacttttatgtcattttatattta 364  Q
    |||||||||||||||||||||||||||||    
T  240077 atatgtacttttatgtcattttatattta 240049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 8340706 - 8340644
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||| |||||| ||| ||||||||||||||||| ||| |||||||||| |||||||    
T  8340706 aaaattaaacaaacatgtacattt-tgtcattttatatttat-agttatttcaacagttaatttt 8340644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 21721918 - 21721962
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||||||||||||||||| ||  |||||||| |||||||||    
T  21721918 ttttatgtcattttatatttataagctatttcaactgctaatttt 21721962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 32481806 - 32481743
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| | ||| ||||||| ||||||||    
T  32481806 aaaattaaacaagcatgtccttttatgtcattttatatttat-aatcacttcaacaactaatttt 32481743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 32656042 - 32656078
Alignment:
Q  323 taaaaataaacaaatatgtacttttatgtcattttat 359  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  32656042 taaaaataaataaatatgtactttaatgtcattttat 32656078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 38245479 - 38245423
Alignment:
Q  332 acaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||| |||| |||||||||||||||||||||| ||  || ||||||| ||||||||    
T  38245479 acaaacatgtccttttatgtcattttatatttaacaaccacttcaacaactaatttt 38245423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 39239982 - 39239938
Alignment:
Q  344 ttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||| ||||||| || ||||||| ||||||||    
T  39239982 ttttatgtcattttatacttatcagccacttcaacaactaatttt 39239938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 184
Target Start/End: Complemental strand, 2968528 - 2968405
Alignment:
Q  61 ggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtgatga 160  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||    
T  2968528 ggagatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagtcaatgatgtttttgatttttctgagtaaaatgtgaaga 2968429  T
Q  161 aggaggtatgagtaatgcaggggc 184  Q
    |||| | ||  |||||||||||||    
T  2968428 aggatgaatatgtaatgcaggggc 2968405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 52 - 183
Target Start/End: Complemental strand, 4641767 - 4641636
Alignment:
Q  52 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaa 151  Q
    |||||||  ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||| || |||||| |||||||||||| ||    
T  4641767 agaatcgatggagatgatgatgattttggaggggcgacaatggagaacgttttagcgggaaggagaagagtcaaagatgtttttgatgtttctgagtaaa 4641668  T
Q  152 atgtgatgaaggaggtatgagtaatgcagggg 183  Q
    |||||| |||||||| ||  ||||||||||||    
T  4641667 atgtgaagaaggaggaatatgtaatgcagggg 4641636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 184
Target Start/End: Complemental strand, 29077740 - 29077608
Alignment:
Q  52 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaa 151  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||| |||||||||||| ||    
T  29077740 agaatcgatggagatgatgatgattttggaggggtgaaaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgagtaaa 29077641  T
Q  152 atgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||| |||| ||  ||  |||||||||||||    
T  29077640 atgtgaagaagaagaaatatgtaatgcaggggc 29077608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 184
Target Start/End: Complemental strand, 29112712 - 29112580
Alignment:
Q  52 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaa 151  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||| |||||||| ||| ||    
T  29112712 agaatcgatggagatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatgtttctaagtaaa 29112613  T
Q  152 atgtgatgaaggaggtatgagtaatgcaggggc 184  Q
    |||||| |||| ||| ||  |||||||||||||    
T  29112612 atgtgaagaagaaggaatatgtaatgcaggggc 29112580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 30641032 - 30641174
Alignment:
Q  36 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttt 135  Q
    |||||| |||||||| |||||| || |||||||||||||||||||||||| ||||| ||| |  ||||||| |||||||||||| ||||| |||||||||    
T  30641032 aaacttcaaaaacgtcagaatc-tcagagatgatgatgattttggaggggcgagaacggaaa--gttttagtgggaaggagaagggtcaaggacgttttt 30641128  T
Q  136 tatgtttctgagtgaaatgtgatgaaggaggtatgagtaatgcaggggc 184  Q
     |||||||| | | | |||   |||||||||||||||||||||||||||    
T  30641129 gatgtttctcacttatatg---tgaaggaggtatgagtaatgcaggggc 30641174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 20525956 - 20526033
Alignment:
Q  311 tttataaagaaataaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||  |||||||||||||    
T  20525956 tttataaagaaataaaaataaacaaatatgtccttttatgtcattttatatttatttgtcattcaaacagctaatttt 20526033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 329 - 388
Target Start/End: Original strand, 1291086 - 1291145
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| || ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  1291086 taaacatatgtgtacttttatgtcattttatatttatcagttatttcaaaagctaatttt 1291145  T

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Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 22707997 - 22708047
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  22707997 atgtccttttatgtcattttatatttatcagccacttcaacagctaatttt 22708047  T

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Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 24118604 - 24118554
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  24118604 atgtccttttatgtcattttatatttatcagccacttcaacagctaatttt 24118554  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 4977056 - 4977119
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    ||||||||||||  |||| ||||||||||||||||||||||| ||||| |||||||| |||||||    
T  4977056 aaaaataaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagttaatttt 4977119  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 18802244 - 18802307
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  18802244 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 18802307  T

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Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 4314599 - 4314669
Alignment:
Q  63 agatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttt 133  Q
    ||||||||||||||||||||   |||  || | ||| ||||||||||||||||||||||||| ||||||||    
T  4314599 agatgatgatgattttggagaaatgaagattgtgaaggttttagcgggaaggagaagagtcattgacgttt 4314669  T

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Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 18369005 - 18368955
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||||| |||||||| |||||||||| ||||||||||||||||    
T  18369005 atgtccttttatgttattttatacttatcagtcacttcaacagctaatttt 18368955  T

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Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 20646372 - 20646422
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  20646372 atgttcttttatgtcattttatacttatcagccacttcaacagctaatttt 20646422  T

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Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 32560591 - 32560641
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||||||||||| || ||||||| ||||||||    
T  32560591 atgtccttttatgtcattttatatttatcagccacttcaacaactaatttt 32560641  T

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Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 32561829 - 32561779
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  32561829 atgtccttttatgtcattttatacttatcagccacttcaacagctaatttt 32561779  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 388
Target Start/End: Original strand, 12131164 - 12131229
Alignment:
Q  323 taaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||| ||| ||| |||| |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  12131164 taaaaaaaaaaaaacatgttcttttatgtcattttatacttatcagccacttcaacaactaatttt 12131229  T

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Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 25171828 - 25171924
Alignment:
Q  60 cggagatgatgatgattttggaggggtgagaatggagaatgttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagtgaaatgtga 157  Q
    |||||||||| |||||||||||| |||||  |||  ||| |||||||||||||||||||  ||||  ||||||||| | | |||||| ||||||||||    
T  25171828 cggagatgataatgattttggagaggtgaagatgatgaaggttttagcgggaaggagaaaggtcagggacgtttttga-ggttctgactgaaatgtga 25171924  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 191457 - 191520
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  191457 aaaattaaacaagcatgtccttttatgtcagtttatatttat-agtcacttcaacagctaatttt 191520  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 1790323 - 1790386
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  1790323 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacaactaatttt 1790386  T

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Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 18368298 - 18368235
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| ||||||| ||||| ||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  18368298 aaaattaaacaagtatgtccttttatgtcattttatatctat-agtcacttcaagagctaatttt 18368235  T

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Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 21527514 - 21527578
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||| | |||| ||||||||||||||||||||||| ||||| ||||| || |||||||    
T  21527514 aaaattaaacatacatgtccttttatgtcattttatatttatgagtcacttcaatagttaatttt 21527578  T

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Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 31603476 - 31603412
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| |||||||||||||||||||||||||  || ||||||| ||||||||    
T  31603476 aaaattaaacaagcatgtccttttatgtcattttatatttatcaaccacttcaacaactaatttt 31603412  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 388
Target Start/End: Complemental strand, 31259110 - 31259052
Alignment:
Q  329 taaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||||||  |||| ||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  31259110 taaacaagcatgtccttttatgtcattttatatttat-agtcacttcaatagctaatttt 31259052  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 384
Target Start/End: Original strand, 14856179 - 14856220
Alignment:
Q  343 cttttatgtcattttatatttatcagtcatttcaacagctaa 384  Q
    ||||||||||||||||||||||||||| | ||| ||||||||    
T  14856179 cttttatgtcattttatatttatcagttacttcgacagctaa 14856220  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 29077561 - 29077492
Alignment:
Q  233 actttttccaattcaatcaaattagtcattcaacacttggcttcctttttgccacgtatataagacaaca 302  Q
    ||||||||||| ||||||||||| |||  | ||||| |||||||||| ||||||||  || |||||||||    
T  29077561 actttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacaaca 29077492  T

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Target: scaffold0115 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 14237 - 14300
Alignment:
Q  324 aaaaataaacaaatatgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  14237 aaaattaaacaagcatgtccttttatgtcattttatatttat-agtcacttcaacagctaatttt 14300  T

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Target: scaffold0464 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 5345 - 5395
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||| ||||||||||    
T  5345 atgtccttttatgtcattttatacttatcaggcacttcaagagctaatttt 5395  T

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Target: scaffold0325 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 19052 - 19102
Alignment:
Q  338 atgtacttttatgtcattttatatttatcagtcatttcaacagctaatttt 388  Q
    |||| |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  19052 atgtccttttatgtcattttatacttatcagccacttcaacaactaatttt 19102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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