View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13393_high_19 (Length: 220)
Name: NF13393_high_19
Description: NF13393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13393_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 12 - 202
Target Start/End: Original strand, 51543729 - 51543919
Alignment:
| Q |
12 |
tcatcaaacagtttgcaagcagaagttcaaccagtgattcaaatatatgtatacgtgcccatttcnnnnnnnnnnnngcaacacagtaataacactgaac |
111 |
Q |
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| T |
51543729 |
tcatcaaacagtttgcaagcagaagttcaaccagtgattcaaatatatgtatacgtgcccatttcaaaaaataaaaagcaacacagtaataacactgaac |
51543828 |
T |
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| Q |
112 |
aacaatagcgttgtgattgtttgaatagaagttgtgaagagagaaaccttgtagagagcgtaaaagagaaatggccaatttgtaacgtttg |
202 |
Q |
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| T |
51543829 |
aacaatagcgttgggattgtttgaatagaagttgtgaagagagaaaccttgtagagagcgtaaaagagaaatggccaatttgtaacgtttg |
51543919 |
T |
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