View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13393_low_17 (Length: 275)

Name: NF13393_low_17
Description: NF13393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13393_low_17
NF13393_low_17
[»] chr6 (19 HSPs)
chr6 (50-275)||(6197453-6197678)
chr6 (74-251)||(1391653-1391830)
chr6 (75-275)||(2300738-2300938)
chr6 (50-251)||(28002694-28002895)
chr6 (74-275)||(29076603-29076805)
chr6 (74-275)||(29111576-29111779)
chr6 (74-275)||(7051850-7052051)
chr6 (81-243)||(31895733-31895895)
chr6 (81-251)||(7497105-7497274)
chr6 (81-243)||(34759056-34759218)
chr6 (81-251)||(34773438-34773608)
chr6 (81-251)||(14262439-14262609)
chr6 (81-204)||(31067569-31067682)
chr6 (81-209)||(30385075-30385191)
chr6 (109-251)||(656994-657122)
chr6 (81-189)||(4200443-4200541)
chr6 (74-123)||(2238668-2238717)
chr6 (75-115)||(11113733-11113773)
chr6 (160-204)||(3848286-3848330)
[»] chr3 (62 HSPs)
chr3 (50-275)||(20498214-20498439)
chr3 (50-251)||(10139122-10139323)
chr3 (50-251)||(996062-996263)
chr3 (74-275)||(19253832-19254033)
chr3 (74-275)||(33807798-33808000)
chr3 (50-251)||(3206181-3206382)
chr3 (74-275)||(3999645-3999846)
chr3 (74-251)||(6589593-6589770)
chr3 (50-250)||(37820453-37820653)
chr3 (74-251)||(29448858-29449035)
chr3 (74-250)||(54625622-54625798)
chr3 (50-251)||(35337764-35337963)
chr3 (80-275)||(33996547-33996742)
chr3 (74-275)||(40246849-40247050)
chr3 (74-275)||(25418371-25418572)
chr3 (74-275)||(44762037-44762238)
chr3 (74-275)||(53929128-53929329)
chr3 (75-275)||(52114533-52114734)
chr3 (89-250)||(51699495-51699655)
chr3 (74-251)||(6035053-6035230)
chr3 (81-251)||(40897173-40897343)
chr3 (81-275)||(17946293-17946487)
chr3 (109-249)||(22057793-22057933)
chr3 (82-251)||(29030035-29030203)
chr3 (74-203)||(5825139-5825268)
chr3 (81-251)||(18749641-18749811)
chr3 (81-251)||(36674137-36674307)
chr3 (81-251)||(44906520-44906690)
chr3 (81-251)||(11431555-11431725)
chr3 (81-251)||(34484037-34484207)
chr3 (74-162)||(6131233-6131321)
chr3 (81-275)||(26107266-26107460)
chr3 (81-209)||(32580247-32580375)
chr3 (128-248)||(1440006-1440126)
chr3 (94-251)||(51737746-51737903)
chr3 (74-245)||(27899379-27899540)
chr3 (81-204)||(54628920-54629043)
chr3 (81-251)||(48379186-48379356)
chr3 (81-251)||(52617978-52618142)
chr3 (81-204)||(31646293-31646414)
chr3 (81-209)||(50903247-50903375)
chr3 (74-185)||(1439894-1440005)
chr3 (81-244)||(52810414-52810577)
chr3 (85-251)||(20833021-20833187)
chr3 (74-208)||(52079999-52080117)
chr3 (81-251)||(10728658-10728818)
chr3 (106-200)||(55235264-55235359)
chr3 (81-251)||(39038069-39038229)
chr3 (81-275)||(37454866-37455050)
chr3 (140-251)||(10660564-10660675)
chr3 (74-127)||(33807680-33807733)
chr3 (74-209)||(39842494-39842619)
chr3 (75-251)||(44276418-44276580)
chr3 (151-275)||(23753463-23753587)
chr3 (81-209)||(50762067-50762185)
chr3 (92-209)||(6975817-6975924)
chr3 (146-251)||(539476-539581)
chr3 (81-138)||(45862983-45863040)
chr3 (81-149)||(15492874-15492942)
chr3 (153-248)||(23535890-23535984)
chr3 (82-137)||(12103733-12103789)
chr3 (220-248)||(6131317-6131345)
[»] chr8 (37 HSPs)
chr8 (50-251)||(24501788-24501989)
chr8 (74-275)||(26374429-26374630)
chr8 (74-251)||(42938116-42938293)
chr8 (50-275)||(2704794-2705019)
chr8 (50-251)||(7506874-7507075)
chr8 (50-249)||(42735252-42735451)
chr8 (50-251)||(42937383-42937582)
chr8 (50-275)||(5576595-5576821)
chr8 (74-275)||(23115168-23115368)
chr8 (75-250)||(10392237-10392412)
chr8 (50-275)||(41479103-41479318)
chr8 (81-251)||(10295386-10295557)
chr8 (81-251)||(14782141-14782311)
chr8 (81-251)||(43166696-43166866)
chr8 (81-251)||(44725816-44725986)
chr8 (50-275)||(43959664-43959878)
chr8 (74-204)||(4403184-4403314)
chr8 (81-251)||(9288463-9288633)
chr8 (84-251)||(18958736-18958903)
chr8 (81-251)||(19717887-19718057)
chr8 (81-244)||(26856104-26856267)
chr8 (84-251)||(39467477-39467644)
chr8 (86-275)||(32711305-32711482)
chr8 (80-202)||(4950021-4950143)
chr8 (74-201)||(39189815-39189940)
chr8 (81-251)||(18305977-18306137)
chr8 (81-251)||(32497555-32497715)
chr8 (81-251)||(7466365-7466525)
chr8 (94-201)||(13478269-13478376)
chr8 (140-251)||(16362226-16362337)
chr8 (95-203)||(8410416-8410526)
chr8 (151-251)||(31623725-31623825)
chr8 (81-251)||(42305801-42305961)
chr8 (151-251)||(4031334-4031434)
chr8 (81-209)||(37857191-37857309)
chr8 (74-138)||(9770439-9770503)
chr8 (94-138)||(4031297-4031341)
[»] chr5 (27 HSPs)
chr5 (74-275)||(21147073-21147274)
chr5 (50-251)||(7016714-7016915)
chr5 (74-251)||(33656040-33656217)
chr5 (80-275)||(5272924-5273119)
chr5 (50-275)||(27458925-27459149)
chr5 (94-251)||(849177-849334)
chr5 (80-275)||(139279-139474)
chr5 (50-275)||(32157869-32158098)
chr5 (74-251)||(1152102-1152279)
chr5 (108-275)||(6460798-6460965)
chr5 (81-251)||(14000111-14000281)
chr5 (84-249)||(4550266-4550431)
chr5 (81-251)||(7947579-7947749)
chr5 (81-251)||(13925961-13926131)
chr5 (81-251)||(39852375-39852545)
chr5 (74-246)||(9689693-9689864)
chr5 (114-245)||(14465266-14465397)
chr5 (81-251)||(4240468-4240628)
chr5 (81-204)||(5949185-5949298)
chr5 (74-251)||(22746327-22746496)
chr5 (140-251)||(1461203-1461314)
chr5 (74-251)||(9220716-9220883)
chr5 (81-251)||(40013718-40013878)
chr5 (151-251)||(37013944-37014044)
chr5 (217-251)||(16894044-16894078)
chr5 (74-149)||(1511349-1511426)
chr5 (81-138)||(37014037-37014094)
[»] chr2 (36 HSPs)
chr2 (74-275)||(24776362-24776563)
chr2 (50-275)||(16269698-16269923)
chr2 (50-275)||(20605243-20605468)
chr2 (50-275)||(31170602-31170827)
chr2 (50-251)||(14198555-14198756)
chr2 (50-275)||(12407387-12407612)
chr2 (50-275)||(43847653-43847878)
chr2 (50-251)||(305443-305644)
chr2 (74-275)||(5093049-5093250)
chr2 (50-275)||(35317069-35317294)
chr2 (50-275)||(22551741-22551966)
chr2 (94-275)||(1789449-1789630)
chr2 (80-247)||(32125285-32125455)
chr2 (50-251)||(9120157-9120358)
chr2 (74-275)||(44765782-44765974)
chr2 (81-251)||(28844586-28844756)
chr2 (81-251)||(33135654-33135823)
chr2 (81-244)||(10657444-10657607)
chr2 (81-251)||(18177298-18177468)
chr2 (81-251)||(25288190-25288360)
chr2 (99-209)||(26788859-26788969)
chr2 (81-192)||(43078653-43078764)
chr2 (81-251)||(28740302-28740462)
chr2 (140-251)||(7026635-7026746)
chr2 (81-242)||(13833441-13833592)
chr2 (74-251)||(26601214-26601379)
chr2 (74-200)||(10125302-10125418)
chr2 (81-251)||(3463703-3463863)
chr2 (151-251)||(3574878-3574978)
chr2 (140-203)||(379016-379079)
chr2 (81-138)||(6224576-6224633)
chr2 (167-251)||(215320-215404)
chr2 (151-209)||(6224626-6224684)
chr2 (83-138)||(215249-215303)
chr2 (225-275)||(20605159-20605209)
chr2 (160-209)||(21370638-21370687)
[»] scaffold0400 (1 HSPs)
scaffold0400 (50-275)||(15009-15234)
[»] scaffold0365 (1 HSPs)
scaffold0365 (50-275)||(15652-15877)
[»] chr7 (62 HSPs)
chr7 (50-275)||(40996624-40996849)
chr7 (75-275)||(43581090-43581290)
chr7 (74-251)||(7718361-7718538)
chr7 (50-251)||(18914710-18914911)
chr7 (50-275)||(973191-973416)
chr7 (50-250)||(30440828-30441028)
chr7 (74-251)||(7719259-7719436)
chr7 (50-248)||(34695307-34695505)
chr7 (50-275)||(47914273-47914498)
chr7 (74-275)||(12893415-12893616)
chr7 (74-275)||(44343395-44343596)
chr7 (50-275)||(47879175-47879400)
chr7 (50-251)||(39219352-39219552)
chr7 (50-251)||(20275238-20275439)
chr7 (50-251)||(34009043-34009245)
chr7 (74-251)||(32142916-32143095)
chr7 (74-244)||(10068498-10068668)
chr7 (74-205)||(7113529-7113660)
chr7 (81-251)||(23101322-23101492)
chr7 (104-205)||(43679491-43679592)
chr7 (81-251)||(3022950-3023120)
chr7 (81-251)||(28342371-28342541)
chr7 (81-251)||(29614770-29614940)
chr7 (81-251)||(39784123-39784293)
chr7 (81-251)||(18838413-18838583)
chr7 (84-251)||(33382661-33382828)
chr7 (81-251)||(8675357-8675527)
chr7 (81-251)||(9882243-9882412)
chr7 (81-251)||(28034811-28034981)
chr7 (102-209)||(12963767-12963874)
chr7 (81-251)||(7993166-7993336)
chr7 (74-203)||(43187356-43187485)
chr7 (74-275)||(9179880-9180071)
chr7 (142-247)||(31638910-31639015)
chr7 (74-209)||(12740439-12740573)
chr7 (74-251)||(3797066-3797233)
chr7 (93-208)||(727587-727692)
chr7 (105-204)||(25805763-25805862)
chr7 (118-251)||(10676463-10676596)
chr7 (81-189)||(37972873-37972981)
chr7 (84-244)||(44256775-44256935)
chr7 (75-251)||(19251563-19251729)
chr7 (81-200)||(19810874-19810983)
chr7 (81-189)||(41827390-41827498)
chr7 (84-251)||(44121919-44122076)
chr7 (81-251)||(509680-509840)
chr7 (81-251)||(40460723-40460883)
chr7 (109-243)||(32883814-32883948)
chr7 (138-251)||(46405494-46405607)
chr7 (140-251)||(37327951-37328062)
chr7 (52-204)||(1470213-1470362)
chr7 (84-251)||(33892269-33892426)
chr7 (84-251)||(44623295-44623452)
chr7 (91-169)||(10617024-10617102)
chr7 (81-275)||(29585515-29585698)
chr7 (140-251)||(39028121-39028232)
chr7 (151-209)||(47066770-47066828)
chr7 (151-204)||(17001099-17001152)
chr7 (145-204)||(447854-447913)
chr7 (81-138)||(17001049-17001106)
chr7 (221-250)||(8078428-8078457)
chr7 (81-138)||(47066821-47066878)
[»] chr4 (64 HSPs)
chr4 (50-275)||(25331136-25331361)
chr4 (74-275)||(41881082-41881284)
chr4 (74-275)||(55302848-55303049)
chr4 (52-251)||(1044836-1045035)
chr4 (74-275)||(1112898-1113099)
chr4 (74-275)||(12112950-12113151)
chr4 (75-247)||(32950837-32951009)
chr4 (50-275)||(34228559-34228784)
chr4 (74-247)||(7007407-7007580)
chr4 (74-251)||(42786713-42786890)
chr4 (74-275)||(22202020-22202221)
chr4 (50-247)||(30009653-30009850)
chr4 (51-251)||(39479332-39479534)
chr4 (74-275)||(37046450-37046653)
chr4 (52-237)||(41320853-41321038)
chr4 (50-250)||(3436623-3436823)
chr4 (103-250)||(25446080-25446227)
chr4 (104-275)||(28541703-28541874)
chr4 (74-275)||(46635648-46635843)
chr4 (95-275)||(19740929-19741109)
chr4 (51-275)||(31314719-31314929)
chr4 (50-275)||(24130957-24131173)
chr4 (104-209)||(7249795-7249900)
chr4 (81-251)||(5441433-5441603)
chr4 (81-251)||(27768085-27768255)
chr4 (81-251)||(54341173-54341343)
chr4 (74-251)||(53275868-53276046)
chr4 (81-251)||(37828409-37828579)
chr4 (81-251)||(51320950-51321120)
chr4 (74-206)||(27454078-27454210)
chr4 (118-242)||(23464993-23465117)
chr4 (84-251)||(37915856-37916023)
chr4 (81-243)||(54853475-54853637)
chr4 (81-209)||(48261198-48261326)
chr4 (74-251)||(9163105-9163274)
chr4 (131-250)||(25504696-25504815)
chr4 (81-251)||(32322120-32322290)
chr4 (75-251)||(40537161-40537322)
chr4 (83-203)||(44770862-44770982)
chr4 (74-251)||(39307253-39307430)
chr4 (81-251)||(23987243-23987403)
chr4 (81-168)||(8711978-8712065)
chr4 (81-203)||(12913301-12913413)
chr4 (81-168)||(24736447-24736534)
chr4 (81-203)||(56445362-56445474)
chr4 (81-209)||(41725196-41725321)
chr4 (138-251)||(29649731-29649844)
chr4 (74-149)||(11090435-11090510)
chr4 (75-251)||(28483928-28484093)
chr4 (81-244)||(30967316-30967469)
chr4 (81-251)||(36479249-36479408)
chr4 (118-203)||(28371001-28371086)
chr4 (151-249)||(49834890-49834988)
chr4 (81-250)||(49501526-49501687)
chr4 (81-250)||(49507591-49507752)
chr4 (80-209)||(41581795-41581923)
chr4 (83-189)||(20021424-20021531)
chr4 (84-209)||(5800049-5800164)
chr4 (151-209)||(32684065-32684123)
chr4 (84-209)||(50018322-50018437)
chr4 (84-138)||(32684018-32684072)
chr4 (84-148)||(36727960-36728023)
chr4 (82-115)||(55047641-55047674)
chr4 (82-174)||(12193135-12193227)
[»] scaffold0151 (1 HSPs)
scaffold0151 (50-251)||(38581-38781)
[»] chr1 (48 HSPs)
chr1 (50-275)||(19451784-19452009)
chr1 (50-275)||(21222146-21222371)
chr1 (50-251)||(50192526-50192728)
chr1 (50-247)||(45759985-45760182)
chr1 (74-275)||(35279671-35279872)
chr1 (50-275)||(49198245-49198469)
chr1 (74-275)||(6304252-6304454)
chr1 (50-275)||(47654327-47654553)
chr1 (50-251)||(28824349-28824549)
chr1 (74-248)||(45535970-45536150)
chr1 (74-250)||(35679128-35679304)
chr1 (50-247)||(47780738-47780935)
chr1 (79-247)||(49418111-49418279)
chr1 (84-250)||(32588963-32589129)
chr1 (109-275)||(730147-730314)
chr1 (74-251)||(29556127-29556305)
chr1 (51-204)||(31572174-31572327)
chr1 (81-251)||(6312597-6312767)
chr1 (81-251)||(29396395-29396565)
chr1 (74-209)||(9577432-9577567)
chr1 (84-251)||(51701603-51701770)
chr1 (74-251)||(37014640-37014817)
chr1 (81-251)||(48177469-48177639)
chr1 (82-251)||(46328065-46328234)
chr1 (103-247)||(48524346-48524490)
chr1 (81-251)||(25612180-25612350)
chr1 (74-250)||(33025536-33025703)
chr1 (81-275)||(28387400-28387594)
chr1 (81-204)||(9322507-9322630)
chr1 (81-204)||(15835060-15835183)
chr1 (81-244)||(38536106-38536259)
chr1 (81-244)||(38558324-38558477)
chr1 (81-251)||(29219309-29219469)
chr1 (142-201)||(955823-955882)
chr1 (74-204)||(48668785-48668905)
chr1 (85-251)||(5495117-5495273)
chr1 (151-251)||(18798514-18798614)
chr1 (118-209)||(51085860-51085951)
chr1 (160-251)||(49230909-49231000)
chr1 (187-275)||(22183369-22183457)
chr1 (108-251)||(47784410-47784542)
chr1 (82-174)||(38320006-38320098)
chr1 (84-251)||(45272609-45272765)
chr1 (51-111)||(48524805-48524865)
chr1 (151-201)||(31622536-31622586)
chr1 (217-275)||(953818-953876)
chr1 (82-130)||(18798615-18798663)
chr1 (110-138)||(955876-955904)
[»] scaffold0004 (1 HSPs)
scaffold0004 (74-251)||(102125-102302)
[»] scaffold0113 (1 HSPs)
scaffold0113 (74-251)||(38895-39072)
[»] scaffold0037 (1 HSPs)
scaffold0037 (77-275)||(100217-100415)
[»] scaffold0276 (1 HSPs)
scaffold0276 (75-275)||(540-740)
[»] scaffold0054 (1 HSPs)
scaffold0054 (81-251)||(36914-37084)
[»] scaffold0543 (1 HSPs)
scaffold0543 (81-204)||(10637-10760)
[»] scaffold0110 (1 HSPs)
scaffold0110 (81-204)||(39624-39747)
[»] scaffold1504 (1 HSPs)
scaffold1504 (81-209)||(936-1063)
[»] scaffold0042 (1 HSPs)
scaffold0042 (81-204)||(58083-58206)
[»] scaffold0347 (1 HSPs)
scaffold0347 (74-149)||(14892-14967)
[»] scaffold0306 (1 HSPs)
scaffold0306 (81-244)||(13919-14072)
[»] scaffold0152 (3 HSPs)
scaffold0152 (140-244)||(21304-21408)
scaffold0152 (81-113)||(21255-21287)
scaffold0152 (81-113)||(28510-28542)
[»] scaffold0922 (1 HSPs)
scaffold0922 (144-251)||(4230-4337)
[»] scaffold0839 (1 HSPs)
scaffold0839 (94-174)||(3712-3792)
[»] scaffold0007 (1 HSPs)
scaffold0007 (108-201)||(199905-199998)


Alignment Details
Target: chr6 (Bit Score: 159; Significance: 1e-84; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 6197453 - 6197678
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6197453 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 6197552  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  6197553 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 6197652  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  6197653 actttttttaaatgacaaagaatctt 6197678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 1391830 - 1391653
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1391830 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 1391731  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || || ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  1391730 ccttccaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 1391653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 75 - 275
Target Start/End: Original strand, 2300738 - 2300938
Alignment:
Q  75 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2300738 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 2300837  T
Q  175 cgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatct 274  Q
    | ||||||||||||||||||| ||||||| |||||       ||||||| |||||||||||||||||||||||||||       ||||||||||||||||    
T  2300838 cttcgaaatttgaatgattttcaataccagtagactttttttaagtgatcaagagtcttgattgaataccacaagactttttttaaatgacaaagaatct 2300937  T
Q  275 t 275  Q
    |    
T  2300938 t 2300938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 28002895 - 28002694
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  28002895 tagtaaaatcttaaaagaaaaaaacaatcctaagaagcttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatttcacaaaatcca 28002796  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||| |||    
T  28002795 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccagaag 28002696  T
Q  250 ac 251  Q
    ||    
T  28002695 ac 28002694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 29076805 - 29076603
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  29076805 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29076706  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaat 272  Q
    || ||||||||||||||||||||||||| |||||||        |||||||||||| ||| ||||||||||||||||||       ||||||||||||||    
T  29076705 ccttcgaaatttgaatgattttgaatactactagacttttttttaagtgattaagaatctagattgaataccacaagactttttttaaatgacaaagaat 29076606  T
Q  273 ctt 275  Q
    |||    
T  29076605 ctt 29076603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 29111779 - 29111576
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  29111779 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29111680  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagac--nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaa 271  Q
    || ||||||||||||||||||||||||| |||||||         |||||||||||| ||| ||||||||||||||||||       |||||||||||||    
T  29111679 ccttcgaaatttgaatgattttgaatactactagactttttttttaagtgattaagaatctagattgaataccacaagactttttttaaatgacaaagaa 29111580  T
Q  272 tctt 275  Q
    ||||    
T  29111579 tctt 29111576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 7052051 - 7051850
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||| ||||||||||||||| ||| |||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||  ||||||||||||||    
T  7052051 caattctaagaaatctcatgattttatgaaaaactttttcatgctaaaattttactagaaaatcctacaaaatccatcaaaatccaatttattaaacaat 7051952  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || |||||||||||||||||||||||| |||  |||       ||||||| |||||||||||||| ||||||||||||       |||||||||||||||    
T  7051951 ccttcgaaatttgaatgattttgaatatcacacgactttttttaagtgatgaagagtcttgattgtataccacaagactttttttaaatgacaaagaatc 7051852  T
Q  274 tt 275  Q
    ||    
T  7051851 tt 7051850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 31895895 - 31895733
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  31895895 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactagaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 31895796  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatac 243  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||    
T  31895795 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatac 31895733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 7497274 - 7497105
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||| ||||||||||||||||||  |||||||||||| ||| ||||    
T  7497274 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc-acaaaatccatcaaaatccaatttattaaacactccttcga 7497176  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || | ||||||||||||||||||||||    
T  7497175 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaataccacaagac 7497105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 34759056 - 34759218
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| | ||    
T  34759056 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttgga 34759155  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatac 243  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||    
T  34759156 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatac 34759218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 34773608 - 34773438
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||  ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  34773608 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactgcaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34773509  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| |||        || |||| || ||||||||||||||||| ||||||    
T  34773508 aatttgaatgattttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagac 34773438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 14262439 - 14262609
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||| ||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  14262439 aagaaatcccatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 14262538  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||| |||||||||||||||||| ||||       || |||| || | ||||||||||||||| ||||||    
T  14262539 aatttaaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagac 14262609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 31067682 - 31067569
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||          |||||||||||||||| ||||    
T  31067682 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 31067593  T
Q  181 aatttgaatgattttgaataccac 204  Q
    ||||||||||||||||||||||||    
T  31067592 aatttgaatgattttgaataccac 31067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 209
Target Start/End: Original strand, 30385075 - 30385191
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||||||||| |  || ||||||| ||||| ||||||||||||||||||          |||||||||||||||| ||||    
T  30385075 aagaaatctcatcttttcatgaaagactttgt--tgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 30385162  T
Q  181 aatttgaatgattttgaataccactagac 209  Q
    |||||||||||||||||||||||| ||||    
T  30385163 aatttgaatgattttgaataccacaagac 30385191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 657122 - 656994
Alignment:
Q  109 ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactaga 208  Q
    |||||||| |||||||||||||   ||||||||||||||||||| |||| |||||||||||           |||||||||||||| |||||||||||||    
T  657122 ttttcatgataaaatttcacta---aatcccacaaaatccatcagaatcagatttattaaa-----------aatttgaatgatttagaataccactaga 657037  T
Q  209 cnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |       |||||||||||||||||||||||||||||||||||    
T  657036 ctttttttaagtgattaagagtcttgattgaataccacaagac 656994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 4200443 - 4200541
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||          ||||||||||||||||||  |||||||||||||||| ||||    
T  4200443 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacact----------acaaaatccatcaaaatccaatttattaaacaatccttcga 4200532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 2238717 - 2238668
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaat 123  Q
    ||||| ||||||||||||||||||||||||||| |||||||| |||||||    
T  2238717 caatcttaagaaatctcatgttttcatgaaagattttttcatactaaaat 2238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 11113733 - 11113773
Alignment:
Q  75 aatcctaagaaatctcatgttttcatgaaagactttttcat 115  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  11113733 aatcctaagaaatctcatgttttcatgaaagacgttttcat 11113773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 3848330 - 3848286
Alignment:
Q  160 atttattaaacaatccgtcgaaatttgaatgattttgaataccac 204  Q
    |||||||||||||||  || |||||| ||||||||||||||||||    
T  3848330 atttattaaacaatcattcaaaatttaaatgattttgaataccac 3848286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 1e-84; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 20498439 - 20498214
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20498439 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 20498340  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  20498339 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 20498240  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  20498239 actttttttaaatgacaaagaatctt 20498214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 10139122 - 10139323
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10139122 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 10139221  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  10139222 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 10139321  T
Q  250 ac 251  Q
    ||    
T  10139322 ac 10139323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 996062 - 996263
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  996062 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 996161  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||    
T  996162 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaag 996261  T
Q  250 ac 251  Q
    ||    
T  996262 ac 996263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 19254033 - 19253832
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19254033 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 19253934  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  19253933 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 19253834  T
Q  274 tt 275  Q
    ||    
T  19253833 tt 19253832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 33807798 - 33808000
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807798 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33807897  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaat 272  Q
    || |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  33807898 ccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaat 33807997  T
Q  273 ctt 275  Q
    |||    
T  33807998 ctt 33808000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 3206181 - 3206382
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3206181 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatcca 3206280  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  3206281 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 3206380  T
Q  250 ac 251  Q
    ||    
T  3206381 ac 3206382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 3999645 - 3999846
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3999645 caatcctaagaaatctcatgtttttatgaaagactttttcattctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 3999744  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  3999745 ccttcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 3999844  T
Q  274 tt 275  Q
    ||    
T  3999845 tt 3999846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 6589770 - 6589593
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6589770 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaataat 6589671  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
     | |||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||    
T  6589670 tcttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaagac 6589593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 50 - 250
Target Start/End: Original strand, 37820453 - 37820653
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37820453 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactggaaaatcccacaaaatcca 37820552  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||    
T  37820553 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaag 37820652  T
Q  250 a 250  Q
    |    
T  37820653 a 37820653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 29448858 - 29449035
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29448858 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 29448957  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || |||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||| ||||||||    
T  29448958 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattgagagtcttgattgaatatcacaagac 29449035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 74 - 250
Target Start/End: Complemental strand, 54625798 - 54625622
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54625798 caatcttaagaaatctcatgttttcatgaaaaactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 54625699  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    || ||||||||||||| |||||||||||||||||||       ||||||||||||||||||||||||||| ||||||    
T  54625698 ccttcgaaatttgaataattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaaga 54625622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 35337963 - 35337764
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35337963 tagtaaaatcttaaaagaaaaaaacaatcctaa-aaatctcatgttttcatgaaa-actttttcatgctaaaatttcactagaaaatcccacaaaatcca 35337866  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  35337865 tcaaaatctgatttattaaacaatccttcgaaatttgaatttttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 35337766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 33996547 - 33996742
Alignment:
Q  80 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcg 179  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  33996547 taagaaatctcatgtttttataaaagactttttcatgctaaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaatccttcg 33996646  T
Q  180 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    |||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  33996647 aaatttgaatgattttgaataccactggattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatctt 33996742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 40247050 - 40246849
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40247050 caatcataaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 40246951  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || || ||||||||||||||||||||||||||||||       || ||||||| ||||||||||||||||||||| ||       |||||||||||||||    
T  40246950 ccttccaaatttgaatgattttgaataccactagactttttttaactgattaatagtcttgattgaataccacaaaactttttttaaatgacaaagaatc 40246851  T
Q  274 tt 275  Q
    ||    
T  40246850 tt 40246849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 25418572 - 25418371
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25418572 caatcctaaggaatctcatgttttcatgaaatactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 25418473  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || |  ||||||||||||||||||||||| |||||        |||||||||| ||||||||||||||||||||||||       |||||||||||||||    
T  25418472 cctttcaaatttgaatgattttgaataccgctagattttttgtaagtgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatc 25418373  T
Q  274 tt 275  Q
    ||    
T  25418372 tt 25418371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 44762037 - 44762238
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44762037 caatcttaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44762136  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || |||||| |||||| ||||| |||||||||||||       ||||||||||||||||||||||||||| ||| |||       |||||||||||||||    
T  44762137 ccttcgaaacttgaataattttaaataccactagactttttttaagtgattaagagtcttgattgaatactacatgactttttttaaatgacaaagaatc 44762236  T
Q  274 tt 275  Q
    ||    
T  44762237 tt 44762238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 53929128 - 53929329
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  53929128 caatcctaaaaaatctcatgttttcattaaagattttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatcttatttattaaacaat 53929227  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    |  |||| |||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  53929228 cgttcgatatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 53929327  T
Q  274 tt 275  Q
    ||    
T  53929328 tt 53929329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 75 - 275
Target Start/End: Complemental strand, 52114734 - 52114533
Alignment:
Q  75 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 174  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||    
T  52114734 aatcctaagaaatctcatgttttcacaaaagattttttcatgctaaaattttactagaaaattccacaaaatctatcaaaatctgatttattaaacaatc 52114635  T
Q  175 cgtcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    |  |||||||||||| |||||||||||||||||||        |||||||||| ||||||||||||||||||||||||       |||||||||||||||    
T  52114634 ctgcgaaatttgaattattttgaataccactagacttttttttaagtgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatc 52114535  T
Q  274 tt 275  Q
    ||    
T  52114534 tt 52114533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 89 - 250
Target Start/End: Original strand, 51699495 - 51699655
Alignment:
Q  89 tcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaa 188  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||    
T  51699495 tcatgttttcacgaaagattttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatcttatttattaaccaatccttcgaaatttgaa 51699594  T
Q  189 tgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  51699595 tgattttgaataccactaga-tttttttaagtgattaagagtcttgattgaataccacaaga 51699655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 6035053 - 6035230
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |    
T  6035053 caatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctaatttattaaacatt 6035152  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
     | |||||||||||||||||||||||| ||| ||||       ||||||| || | ||||||||||||||| ||||||    
T  6035153 gcttcgaaatttgaatgattttgaatatcacgagactttttttaagtgatgaaaaatcttgattgaatacctcaagac 6035230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 40897343 - 40897173
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  40897343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 40897244  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||  ||||       ||||||| || ||||||||||||||||| ||||||    
T  40897243 aatttgaatgattttgaataccataagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 40897173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 81 - 275
Target Start/End: Complemental strand, 17946487 - 17946293
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| | ||    
T  17946487 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 17946388  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    |||||||||||||||||||| ||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||||||||    
T  17946387 aatttgaatgattttgaatatcacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatctt 17946293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 109 - 249
Target Start/End: Complemental strand, 22057933 - 22057793
Alignment:
Q  109 ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactaga 208  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  22057933 ttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccatcgaaatttgaatgattttaaataccactaga 22057834  T
Q  209 cnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
            ||||||| |||||||||||| ||||||||||||    
T  22057833 ttttttttaagtgatcaagagtcttgatggaataccacaag 22057793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 82 - 251
Target Start/End: Complemental strand, 29030203 - 29030035
Alignment:
Q  82 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaa 181  Q
    ||||||||||||||||||| ||| |    |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||    
T  29030203 agaaatctcatgttttcataaaaaaaaaattcatgttaaaatttcattagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttcaaa 29030104  T
Q  182 atttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||||||||    
T  29030103 atttgaatgattttgaataccacaagac-ttttttaagtgattaagagtcttgattgaataccacaagac 29030035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 5825268 - 5825139
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||| |||||||||  ||||||||||||||    
T  5825268 caatcataagaaatctcatgttttcatgaaagcctttttcatgctagaatttcactaaaaaatcccacaaaatctatcaaaatccaatttattaaacaat 5825169  T
Q  174 ccgtcgaaatttgaatgattttgaatacca 203  Q
    || || ||||||||||||||||||||||||    
T  5825168 ccttcaaaatttgaatgattttgaatacca 5825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 18749811 - 18749641
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  18749811 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 18749712  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||| || |||||||||| ||||||    
T  18749711 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtttttattgaatacctcaagac 18749641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 36674137 - 36674307
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| || |    
T  36674137 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 36674236  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  36674237 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 36674307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 44906520 - 44906690
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||| ||||| || ||||||| ||||| ||||||||||||||| ||||||||||  |||||||||||||||| ||||    
T  44906520 aagaaatctcatcttttcatgaaagacattttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 44906619  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  44906620 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 44906690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 11431725 - 11431555
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||||||||||||| |||||||  |||||||||||||||| ||||    
T  11431725 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcga 11431626  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||| |||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  11431625 aatttaaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 11431555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 34484037 - 34484207
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  34484037 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34484136  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| | ||       || |||| || ||||||||||||||||| ||||||    
T  34484137 aatttgaatgattttgaataccacaaaactttttttaaatgatgaaaagtcttgattgaatacctcaagac 34484207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 6131233 - 6131321
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6131233 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatt 6131321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 81 - 275
Target Start/End: Complemental strand, 26107460 - 26107266
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| ||||| |||||| |||||||||||||||||||  |||||||||||||||| ||||    
T  26107460 aagaaatctcatctttttatgaaatactttttcttgttaaaattacactacaaaatcacacaaaatccatcaaaatccaatttattaaacaatccttcga 26107361  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||||||||    
T  26107360 aatttgaatgattttgaataccacaagactttttttaattgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatctt 26107266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 32580375 - 32580247
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||| |||||||||||||||||  |||||||||||||||| ||||    
T  32580375 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccctcaaaatccatcaaaatccaatttattaaacaatccttcga 32580276  T
Q  181 aatttgaatgattttgaataccactagac 209  Q
    |||||||||||||||||||||||| ||||    
T  32580275 aatttgaatgattttgaataccacaagac 32580247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 128 - 248
Target Start/End: Original strand, 1440006 - 1440126
Alignment:
Q  128 ctagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaag 227  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||       |||||||||||    
T  1440006 ctagaaaatcccataaaatccatcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaag 1440105  T
Q  228 agtcttgattgaataccacaa 248  Q
    |||||||||||||||||||||    
T  1440106 agtcttgattgaataccacaa 1440126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 94 - 251
Target Start/End: Original strand, 51737746 - 51737903
Alignment:
Q  94 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgatt 193  Q
    |||| ||||||||||||||| || ||||||| ||| | ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  51737746 tttttatgaaagactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgatt 51737845  T
Q  194 ttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  51737846 ttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 51737903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 27899540 - 27899379
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |          |||||||||||||||||||||||    
T  27899540 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccta----------caaaatctgatttattaaacaat 27899451  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacca 245  Q
    || |||||||||||||||||||||||||||| ||||       || |||  |||||||||||||||||||||    
T  27899450 ccttcgaaatttgaatgattttgaataccaccagactttttttaaatgacaaagagtcttgattgaatacca 27899379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 54629043 - 54628920
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| | ||    
T  54629043 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 54628944  T
Q  181 aatttgaatgattttgaataccac 204  Q
    ||||||||||||||||||||||||    
T  54628943 aatttgaatgattttgaataccac 54628920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 48379356 - 48379186
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||||||| || |||||||||||||| ||||| |  ||||||| ||||| |||||||||||||||||||||||||   |||||||||||||||| ||||    
T  48379356 aagaaatctgatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatccttcga 48379257  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||| ||||||||||| ||||||    
T  48379256 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtctagattgaatacctcaagac 48379186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 52617978 - 52618142
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| ||||||||||| ||      |||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  52617978 aagaaatctcatctttttatgaaagacttgtt------aaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 52618071  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  52618072 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 52618142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 31646293 - 31646414
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||||||||||  ||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||| |||||||||||  ||||    
T  31646293 aagaaatctcat--tttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattcattaaacaatctttcga 31646390  T
Q  181 aatttgaatgattttgaataccac 204  Q
    ||||||||||||||||||||||||    
T  31646391 aatttgaatgattttgaataccac 31646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 81 - 209
Target Start/End: Original strand, 50903247 - 50903375
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||| ||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||      
T  50903247 aagaaatctcatattttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttctt 50903346  T
Q  181 aatttgaatgattttgaataccactagac 209  Q
    |||||||||||||||||||||||| ||||    
T  50903347 aatttgaatgattttgaataccacaagac 50903375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 185
Target Start/End: Original strand, 1439894 - 1440005
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||| ||||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  1439894 caatcctaaaaaatctcatgttttcgtgaaagactttttcataccaaaattttactagaaaatcccacaaaatctatcaaaatctaatttattaaacaat 1439993  T
Q  174 ccgtcgaaattt 185  Q
    || || ||||||    
T  1439994 ccttccaaattt 1440005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 244
Target Start/End: Complemental strand, 52810577 - 52810414
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| | ||| |||||||||||||||||||||||||   |||||||||||||||  || |    
T  52810577 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacgctacaaaatcccacaaaatccatcaaaattcaatttattaaacaatcattcaa 52810478  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacc 244  Q
    |||||||||||||||||||||||| ||||       || |||| || |||||||||||||||||    
T  52810477 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacc 52810414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 251
Target Start/End: Complemental strand, 20833187 - 20833021
Alignment:
Q  85 aatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatt 184  Q
    ||||| || ||||||||||| |||||||| || ||||||| |||||  ||||| |||||||||||||||||||  |||||||||||||||| ||  ||||    
T  20833187 aatcttatcttttcatgaaatactttttcttgttaaaattacactaataaatctcacaaaatccatcaaaatccaatttattaaacaatccttccgaatt 20833088  T
Q  185 tgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||| ||||       ||||||| || | ||||||||||||||| ||||||    
T  20833087 tgaatgattttgaataccacaagactttttttaagtgatgaaaattcttgattgaatacctcaagac 20833021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 208
Target Start/End: Complemental strand, 52080117 - 52079999
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||      |||||||||||||||||||||| |||||||||||||||||||          ||||||||||||||||    
T  52080117 caatcctaagaaatctcatgttttca------actttttcatgctaaaatttcattagaaaatcccacaaaatc----------tgatttattaaacaat 52080034  T
Q  174 ccgtcgaaatttgaatgattttgaataccactaga 208  Q
    || || |||||||||||||||||||||||||||||    
T  52080033 ccttcaaaatttgaatgattttgaataccactaga 52079999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 10728658 - 10728818
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||| || |    
T  10728658 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcca 10728747  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||||||||| |||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  10728748 aatttgaatgattttaaataccacaagactttttgtaagtgatgaaaagtcttgattgaatacctcaagac 10728818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 55235359 - 55235264
Alignment:
Q  106 actttttcatgctaaaatttcactagaaaatcccacaaaa-tccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaata 200  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||||| |  |||||||||||||||  ||||||||||||||||||||||||    
T  55235359 acttttttatgctaaaatttcattagaaaatcccacaaaaatccatcaaaaaccaatttattaaacaatctttcgaaatttgaatgattttgaata 55235264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 39038229 - 39038069
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||| | ||||    
T  39038229 aagaaatctcatctttttatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaattcttcga 39038140  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||| ||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  39038139 aatttgaatgattttggataccacaagacttttttaaagtgatgaaaagtcttgattgaatacctcaagac 39038069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 275
Target Start/End: Complemental strand, 37455050 - 37454866
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||||| ||||||||||||||| ||          |||||||||||||||  ||||    
T  37455050 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaattca----------atttattaaacaatcattcga 37454961  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||||||||    
T  37454960 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaagaatctt 37454866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 10660675 - 10660564
Alignment:
Q  140 acaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 239  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| | ||       || |||| || ||||||||||||    
T  10660675 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaatactttttttaaatgatgaaaagtcttgattga 10660576  T
Q  240 ataccacaagac 251  Q
    ||||| ||||||    
T  10660575 atacctcaagac 10660564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 33807680 - 33807733
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807680 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca 33807733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 209
Target Start/End: Original strand, 39842494 - 39842619
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||| |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||| ||||||||| ||||||||||||||    
T  39842494 caatcccaagaaatctcatcttttcatgaaagactttttcttgttaaaattacatta----------caaaatccgtcaaaatctaatttattaaacaat 39842583  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagac 209  Q
     | |||||||||||||||||||||||| ||| ||||    
T  39842584 tcttcgaaatttgaatgattttgaatatcacgagac 39842619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 75 - 251
Target Start/End: Complemental strand, 44276580 - 44276418
Alignment:
Q  75 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 174  Q
    ||||| || ||||||||||| ||||||||||| |||||| || ||||||||||||||||||||||||||||||||          |||||||||||||||    
T  44276580 aatcccaaaaaatctcatgtcttcatgaaagattttttcttgttaaaatttcactagaaaatcccacaaaatcca----------atttattaaacaatc 44276491  T
Q  175 cgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |     |||||||||||||||||||||||  ||||       ||||||| || | ||||||||||||||| ||||||    
T  44276490 c----taatttgaatgattttgaataccatgagactttttttaagtgatgaaaaatcttgattgaatacctcaagac 44276418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 275
Target Start/End: Original strand, 23753463 - 23753587
Alignment:
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||    
T  23753463 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaga 23753562  T
Q  251 cnnnnnnnaaatgacaaagaatctt 275  Q
    |       |||||||||||||||||    
T  23753563 cttttttaaaatgacaaagaatctt 23753587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 209
Target Start/End: Original strand, 50762067 - 50762185
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||| ||||||||  ||||    
T  50762067 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatcaaacaatcattcga 50762156  T
Q  181 aatttgaatgattttgaataccactagac 209  Q
    |||| ||||||||||||||||||| ||||    
T  50762157 aattagaatgattttgaataccacaagac 50762185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 6975924 - 6975817
Alignment:
Q  92 tgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatga 191  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||||||||||| ||||          ||||| |||| ||| | |||||||||||||||    
T  6975924 tgttttcatgaaagactgtttcatgctcaaattttactagaaaatcccacaaattcca----------atttagtaaataattcttcgaaatttgaatga 6975835  T
Q  192 ttttgaataccactagac 209  Q
    ||||||||||||| ||||    
T  6975834 ttttgaataccacaagac 6975817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 539476 - 539581
Alignment:
Q  146 tccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacca 245  Q
    ||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||| ||||       || |||| || | |||||||||||||||     
T  539476 tccatcaaaatccaatttattaaataatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacct 539575  T
Q  246 caagac 251  Q
    ||||||    
T  539576 caagac 539581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 45863040 - 45862983
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 138  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||    
T  45863040 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 45862983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 15492874 - 15492942
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    ||||||||| |||  ||||||||||| |||||| || |||||||||||||||| |||| ||||||||||    
T  15492874 aagaaatcttatgacttcatgaaagattttttcttgttaaaatttcactagaatatcctacaaaatcca 15492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 248
Target Start/End: Original strand, 23535890 - 23535984
Alignment:
Q  153 aaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 248  Q
    |||||| ||| ||||||| |||| || ||||||||||||||||||||||||| ||||       ||||||| |||||| |||||||||| ||||||    
T  23535890 aaatctaattaattaaacgatccttctaaatttgaatgattttgaataccacaagactttttttaagtgatgaagagt-ttgattgaatgccacaa 23535984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 12103789 - 12103733
Alignment:
Q  82 agaaatctca-tgttttcatgaaagactttttcatgctaaaatttcactagaaaatc 137  Q
    |||||||||| ||| |||||||||||||| ||| || ||||||||||||||||||||    
T  12103789 agaaatctcaatgtcttcatgaaagacttattcttgttaaaatttcactagaaaatc 12103733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 6131317 - 6131345
Alignment:
Q  220 tgattaagagtcttgattgaataccacaa 248  Q
    |||||||||||||||||||||||||||||    
T  6131317 tgattaagagtcttgattgaataccacaa 6131345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 6e-83; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 24501788 - 24501989
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24501788 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 24501887  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  24501888 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 24501987  T
Q  250 ac 251  Q
    ||    
T  24501988 ac 24501989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 26374429 - 26374630
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26374429 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 26374528  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  26374529 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 26374628  T
Q  274 tt 275  Q
    ||    
T  26374629 tt 26374630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 42938116 - 42938293
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42938116 caatcctaagaaatctcatgttttcatgaaagactttttcaggctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 42938215  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  42938216 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 42938293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 2704794 - 2705019
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2704794 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatatcactagaaaatcccacaaaatcca 2704893  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  2704894 tcaaaatttgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 2704993  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  2704994 actttttttaaatgacaaagaatctt 2705019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 7506874 - 7507075
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7506874 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttacatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 7506973  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  7506974 tcaaaatctgatttattaaacaatccttcaaaatttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 7507073  T
Q  250 ac 251  Q
    ||    
T  7507074 ac 7507075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 50 - 249
Target Start/End: Original strand, 42735252 - 42735451
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42735252 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatcca 42735351  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||||||    
T  42735352 tcaaaatctgatttattaaacaatacttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccacaag 42735451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 42937582 - 42937383
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42937582 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttaatgctaaaatttcactagaaaatcccacaaaatcca 42937483  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||  ||||||||||||||||    
T  42937482 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc--gattgaataccacaag 42937385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 5576595 - 5576821
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5576595 tagtaaaatcttaaaaggaaaaaacaatcctaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 5576694  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaa 248  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||    
T  5576695 tcaaaatctggtttattaaacaattcttcgaaatttgaatgattttgaataccacttgacttttttttaagtgattaagagtcttgattgaataccacaa 5576794  T
Q  249 gacnnnnnnnaaatgacaaagaatctt 275  Q
    |||       |||||||||||||||||    
T  5576795 gactttttttaaatgacaaagaatctt 5576821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 23115168 - 23115368
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23115168 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 23115267  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || || |||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  23115268 ccttccaaatttgaatga-tttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacattttttaaatgacaaagaatc 23115366  T
Q  274 tt 275  Q
    ||    
T  23115367 tt 23115368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 75 - 250
Target Start/End: Original strand, 10392237 - 10392412
Alignment:
Q  75 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 174  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10392237 aatcctaataaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 10392336  T
Q  175 cgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    | ||||||||||||||||| |||||||||||||||       |||||||||| ||||||||||||||| |||||||    
T  10392337 cttcgaaatttgaatgattctgaataccactagacttttcttaagtgattaaaagtcttgattgaatatcacaaga 10392412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 41479318 - 41479103
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||      
T  41479318 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaattttactagaaaatcccacaaaatc-- 41479221  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
            |||||||||||||||||  ||||||||||||||||||||||||||| |||||       |||||||||||||||||||||||||||||||||    
T  41479220 --------tgatttattaaacaatcattcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaag 41479129  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  41479128 actttttttaaatgacaaagaatctt 41479103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 10295386 - 10295557
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaa-tccatcaaaatctgatttattaaacaatccgtcg 179  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||||||||| ||||||||||||  |||||||||||||||| |||    
T  10295386 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaaatccatcaaaatccaatttattaaacaatccttcg 10295485  T
Q  180 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  10295486 aaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 10295557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 14782141 - 14782311
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| || |    
T  14782141 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 14782240  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  14782241 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 14782311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 43166696 - 43166866
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||| | ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  43166696 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 43166795  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||  |||||||||||||||||||||||||||    
T  43166796 aatttgaatgattttgaataccacaagacttttttaaaatgacaaagagtcttgattgaataccacaagac 43166866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 44725816 - 44725986
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| || |    
T  44725816 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 44725915  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  44725916 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 44725986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 43959878 - 43959664
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||| |||||||||||||||||| || |||||||||||||||||||||||||||          |||||||||||    
T  43959878 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttaattaaagactttttcatgctaaaatttcac----------cacaaaatcca 43959789  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |       |||||||||||| ||||||||||||| ||||||    
T  43959788 tcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagtcttttttgaagtgattaagaatcttgattgaata-cacaag 43959690  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  43959689 acttttttaaaatgacaaagaatctt 43959664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 74 - 204
Target Start/End: Complemental strand, 4403314 - 4403184
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||| |||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||||||||||||||||||| |  ||||||||||||||    
T  4403314 caatcccaagaaatctcatattttcatgaaagactttttcttgttaaaattacactaaaaaatcccacaaaatccatcaaaacccaatttattaaacaat 4403215  T
Q  174 ccgtcgaaatttgaatgattttgaataccac 204  Q
    || ||||||||||||||||||||||||||||    
T  4403214 ccttcgaaatttgaatgattttgaataccac 4403184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 9288463 - 9288633
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||| ||||||||||  |||||||||||||||| ||||    
T  9288463 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 9288562  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || | | ||||||||||||| ||||||    
T  9288563 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaatttttgattgaatacctcaagac 9288633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 18958736 - 18958903
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    |||||| || |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||| ||||||  |||||||||||||||| |||||||    
T  18958736 aaatctaatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaatccttcgaaat 18958835  T
Q  184 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  18958836 ttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 18958903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 19717887 - 19718057
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||| |||||||||||| || ||||||| ||||| ||||||||||||||||||| ||||||  |||||||||||||| | ||||    
T  19717887 aagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaattcttcga 19717986  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  19717987 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 19718057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 244
Target Start/End: Complemental strand, 26856267 - 26856104
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||||||| || ||||  |||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||| | ||||    
T  26856267 aagaaatcttatttttttctgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatacttcga 26856168  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacc 244  Q
    |||||||||||||||||||||||| ||||       ||||||| || |||||||||||||||||    
T  26856167 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacc 26856104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 39467477 - 39467644
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    ||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||| |||||||||||||||   |||||||||||||||| |||||||    
T  39467477 aaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcgaaat 39467576  T
Q  184 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  39467577 ttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 39467644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 275
Target Start/End: Original strand, 32711305 - 32711482
Alignment:
Q  86 atctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaattt 185  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||             |||| ||||||||||||||||||||||||| |||||||||    
T  32711305 atctcttgttttcatgaaagactttttcatgctaaaatttcaatagatt-----------tcca-caaaatctgatttattaaacaatccttcgaaattt 32711392  T
Q  186 gaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
     |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  32711393 aaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatctt 32711482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 4950021 - 4950143
Alignment:
Q  80 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcg 179  Q
    |||||||||| |||||| ||||||| | ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| ||||  | |    
T  4950021 taagaaatcttatgtttgcatgaaatattttttcatgctaaaatttcactagaaaattccacaaattccatcaaaatctaatttattaaataatcttttg 4950120  T
Q  180 aaatttgaatgattttgaatacc 202  Q
    ||| |||||||||||||||||||    
T  4950121 aaacttgaatgattttgaatacc 4950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 201
Target Start/End: Original strand, 39189815 - 39189940
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||| |||||||||||||||||||||||||| |||||| || |||||||| |||||||||| |  |||||||||||||| ||  ||||||||||||||    
T  39189815 caatcccaagaaatctcatgttttcatgaaagattttttcttgttaaaattt-actagaaaattcatcaaaatccatcaaattc-aatttattaaacaat 39189912  T
Q  174 ccgtcgaaatttgaatgattttgaatac 201  Q
    || |||||||||||||||| ||||||||    
T  39189913 ccttcgaaatttgaatgatgttgaatac 39189940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 18305977 - 18306137
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||          |||||||||||||||  ||||    
T  18305977 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatctttcga 18306066  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  18306067 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 18306137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 32497715 - 32497555
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||||||||| || || ||||||| ||||| ||||||||||||||||||          |||||||||||||||  ||||    
T  32497715 aagaaatctcatcttttcatgaaagactttctcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcattcga 32497626  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  32497625 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 32497555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 7466525 - 7466365
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||          |||||||||||||| | || |    
T  7466525 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaattcttcaa 7466436  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||| ||| || ||||||||||||||||| ||||||    
T  7466435 aatttgaatgattttgaataccacaagactttttttaagcgatgaaaagtcttgattgaatacctcaagac 7466365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 13478269 - 13478376
Alignment:
Q  94 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgatt 193  Q
    ||||||| ||||||||| ||||||||||||||  ||| ||||||| |||||||||| | |||||| |||||||||||||||| ||||||||| || ||||    
T  13478269 ttttcataaaagactttatcatgctaaaatttagctaaaaaatcctacaaaatccaacgaaatctaatttattaaacaatccttcgaaatttaaaagatt 13478368  T
Q  194 ttgaatac 201  Q
    ||||||||    
T  13478369 ttgaatac 13478376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 16362337 - 16362226
Alignment:
Q  140 acaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 239  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||       |||| || || ||||||||||||    
T  16362337 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacgagactttttttaagtaatgaaaagtcttgattga 16362238  T
Q  240 ataccacaagac 251  Q
    ||||| ||||||    
T  16362237 atacctcaagac 16362226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 8410416 - 8410526
Alignment:
Q  95 tttcatgaaagactttttcatgctaaaatttcactagaaaa--tcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgat 192  Q
    |||| ||||||||||| |||| |||||||||||||| ||||  ||||||||||||||||||| ||  ||||| |||||||||| || |||||| ||||||    
T  8410416 tttcgtgaaagactttgtcatactaaaatttcactaaaaaaaatcccacaaaatccatcaaagtccaatttagtaaacaatccttccaaatttcaatgat 8410515  T
Q  193 tttgaatacca 203  Q
    |||||||||||    
T  8410516 tttgaatacca 8410526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 31623825 - 31623725
Alignment:
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| |||||    
T  31623825 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 31623726  T
Q  251 c 251  Q
    |    
T  31623725 c 31623725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 42305801 - 42305961
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||| ||||||||| || ||||||| |||||          |||||||||| ||||||  ||| |||||||||||| ||||    
T  42305801 aagaaatctcattttttcatgaatgactttttcttgttaaaattacacta----------caaaatccattaaaatccaattgattaaacaatccttcga 42305890  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||| |||||||||||||| |||        || |||| || ||||||||||||||||| ||||||    
T  42305891 aatttgaattattttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagac 42305961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 4031334 - 4031434
Alignment:
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||       || | || || ||||||||||||||||| |||||    
T  4031334 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaatttatgaaaagtcttgattgaatacctcaaga 4031433  T
Q  251 c 251  Q
    |    
T  4031434 c 4031434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 37857309 - 37857191
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||||| |||||| || | ||||| ||||          ||||||||||||||||||  |||||||||||||||| |  |    
T  37857309 aagaaatctcatcttttcatgaaagattttttcttgttcaaattacact----------acaaaatccatcaaaatccaatttattaaacaatcctttaa 37857220  T
Q  181 aatttgaatgattttgaataccactagac 209  Q
    ||||||||||| |||||||||||| ||||    
T  37857219 aatttgaatgaatttgaataccacaagac 37857191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 9770439 - 9770503
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 138  Q
    |||||||||||||||||||||||| |||||| | ||||| ||| |||||||||| ||||||||||    
T  9770439 caatcctaagaaatctcatgttttgatgaaatatttttttatgttaaaatttcattagaaaatcc 9770503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 4031297 - 4031341
Alignment:
Q  94 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 138  Q
    |||||||||||||||||||| || ||||||| ||||| |||||||    
T  4031297 ttttcatgaaagactttttcttgttaaaattacactacaaaatcc 4031341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 6e-83; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 21147274 - 21147073
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21147274 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 21147175  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  21147174 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 21147075  T
Q  274 tt 275  Q
    ||    
T  21147074 tt 21147073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 7016714 - 7016915
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7016714 tagtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 7016813  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||    
T  7016814 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 7016913  T
Q  250 ac 251  Q
    ||    
T  7016914 ac 7016915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 33656040 - 33656217
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33656040 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33656139  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || ||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||||    
T  33656140 ccttcgaaatttgaatgattttgaataccattagattttttttaagtgattaagagtcttgattgaataccacaagac 33656217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 5272924 - 5273119
Alignment:
Q  80 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcg 179  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  5272924 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcg 5273023  T
Q  180 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    ||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||| |||||       |||||||||||||||||    
T  5273024 aaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccataagactttttttaaatgacaaagaatctt 5273119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 27458925 - 27459149
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  27458925 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaatgattttttcatgctaaaatttcactagaaaatcccacaaaatcca 27459024  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    ||||||||| |||||||||||||||| || |||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||    
T  27459025 tcaaaatctaatttattaaacaatccttcaaaatctgaatgattttgaataccactagac-ttttttaagtgattaagagtcttgattgaatactacaag 27459123  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  27459124 actttttttaaatgacaaagaatctt 27459149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 94 - 251
Target Start/End: Complemental strand, 849334 - 849177
Alignment:
Q  94 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgatt 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  849334 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 849235  T
Q  194 ttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||| |||||       |||||||||||||||||||||||||||||||||||    
T  849234 ttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaagac 849177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 80 - 275
Target Start/End: Complemental strand, 139474 - 139279
Alignment:
Q  80 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcg 179  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| |||    
T  139474 taagaaatctcatgtttttatgaaagactttttcatattaaaatttcactggaaaatccaacaaaatccatcaaaatctggtttattaaacaatccttcg 139375  T
Q  180 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    ||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||| |||       |||||||||||||||||    
T  139374 aaatttgaatgattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacatgactttttttaaatgacaaagaatctt 139279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 32157869 - 32158098
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagact---ttttcatgctaaaatttcactagaaaatcccacaaaat 146  Q
    |||||||||||||||||       ||||  |||||||||||||||||||||||||||||   ||||| ||||||||||| ||||||||||||||||||||    
T  32157869 tagtaaaatcttaaaagaaaagaacaattttaagaaatctcatgttttcatgaaagactattttttcgtgctaaaattttactagaaaatcccacaaaat 32157968  T
Q  147 ccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaatacca 245  Q
    || ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||        ||||||||| | |||||||||||||||||    
T  32157969 ccgtcaaaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaggggtcttgattgaatacca 32158068  T
Q  246 caagacnnnnnnnaaatgacaaagaatctt 275  Q
    ||||||       |||||||||||||||||    
T  32158069 caagactttttttaaatgacaaagaatctt 32158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 1152102 - 1152279
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| ||||||||||||| ||||||| |||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  1152102 caatcttaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaat 1152201  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || |||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  1152202 ccctcgaaatttgaatgattttgaataccacaagactttttttaagtgataaaaagtcttgattgaatacctcaagac 1152279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 108 - 275
Target Start/End: Complemental strand, 6460965 - 6460798
Alignment:
Q  108 tttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactag 207  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  6460965 tttttcatgataaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaaaccttcgaaatttgaatgattttgaataccactag 6460866  T
Q  208 acnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    |        || |||||||||||||||||||||||| ||| |||       |||||||||||||||||    
T  6460865 attttttttaaatgattaagagtcttgattgaatacgacatgactttttttaaatgacaaagaatctt 6460798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 14000111 - 14000281
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| || |    
T  14000111 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 14000210  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  14000211 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 14000281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 84 - 249
Target Start/End: Original strand, 4550266 - 4550431
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    ||||||||| ||||||||||||||| |||| || ||||||| ||||| ||||| ||||||||||||||||||||  |||||||||||||||| |||||||    
T  4550266 aaatctcatcttttcatgaaagactctttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 4550365  T
Q  184 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    ||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||    
T  4550366 ttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaag 4550431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 7947579 - 7947749
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||| | |||||||||||||||||||| || ||||||| ||||| ||||| ||||||||||||||||||||  |||||||||||||||| ||||    
T  7947579 aagaaatctcttcttttcatgaaagactttttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcga 7947678  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||| | | ||||       ||||||| || ||||||||||||||||| ||||||    
T  7947679 aatttgaatgattttgaatatcgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 7947749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 13926131 - 13925961
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||||| |||| ||||| |||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  13926131 aagaaatatcatcttttcttgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 13926032  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       |||| || || | ||||||||||||||| ||||||    
T  13926031 aatttgaatgattttgaataccacaagactttttttaagtaatgaaaaatcttgattgaatacctcaagac 13925961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 39852545 - 39852375
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||| ||||||||||||||||  ||||| |||||||||| ||||    
T  39852545 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttagtaaacaatccttcga 39852446  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| |  ||||||||||||||||| ||||||    
T  39852445 aatttgaatgattttgaataccacaagactttttttaaatgatgagaagtcttgattgaatacctcaagac 39852375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 9689864 - 9689693
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| |||||||||| ||||||| |||||||||||||||||  |||||||| || |||||||| |||| ||||||||||||||| |||||| |||||||    
T  9689864 caatcataagaaatcttatgtttttatgaaagactttttcataataaaattttacaagaaaatctcacacaatccatcaaaatctaatttatcaaacaat 9689765  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccac 246  Q
    |  ||||||||| ||||||||| |||||||| ||||       ||||||| ||||||||||||||||||||||    
T  9689764 cattcgaaattt-aatgattttaaataccacaagactttttttaagtgatgaagagtcttgattgaataccac 9689693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 114 - 245
Target Start/End: Original strand, 14465266 - 14465397
Alignment:
Q  114 atgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnn 213  Q
    |||||||||| | |||||||||| ||||||||| |||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| ||||        
T  14465266 atgctaaaatattactagaaaattccacaaaattcatcaaaatccgatttattaaacaatctttcgaaatttgaatgattttgaataccacaagactttt 14465365  T
Q  214 nnnaagtgattaagagtcttgattgaatacca 245  Q
       ||| ||| |||||||||||||||||||||    
T  14465366 tttaagcgatgaagagtcttgattgaatacca 14465397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 4240468 - 4240628
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| | |||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||| ||||    
T  4240468 aagaaatctcatctattcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcga 4240557  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  4240558 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 4240628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 5949298 - 5949185
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||| ||||    
T  5949298 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcga 5949209  T
Q  181 aatttgaatgattttgaataccac 204  Q
    ||||||||||||||||||||||||    
T  5949208 aatttgaatgattttgaataccac 5949185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 22746496 - 22746327
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| |||||||||| || ||||||||||||| |||||| || ||||||| ||        |||||||||||||||||||||   ||||||||||||||    
T  22746496 caatcttaagaaatcttatcttttcatgaaagagtttttcttgttaaaattaca--------tcccacaaaatccatcaaaattcaatttattaaacaat 22746405  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |  |||||||||||||||||||||||| ||| ||||       ||||||| || ||| ||||||||||||| ||||||    
T  22746404 cattcgaaatttgaatgattttgaatatcacaagactttttttaagtgatgaaaagttttgattgaatacctcaagac 22746327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 1461203 - 1461314
Alignment:
Q  140 acaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 239  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||| | | ||||       ||||||| || ||||||||||||    
T  1461203 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatagcgcaagactttttttaagtgatgaaaagtcttgattga 1461302  T
Q  240 ataccacaagac 251  Q
    ||||| ||||||    
T  1461303 atacctcaagac 1461314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 9220716 - 9220883
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||||||| ||||||||||| ||||||||||||| || |||||||| |||| ||||||| |          |||| ||| ||| ||||||||||    
T  9220716 caatcctaagaaatatcatgttttcacgaaagactttttcgtgttaaaattttactataaaatccta----------caaattctaattcattaaacaat 9220805  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || | |||||||||||||||||||||| ||  ||||       ||||||| |||||||||||||||||| ||||||||    
T  9220806 ccttagaaatttgaatgattttgaatatcataagactttttttaagtgataaagagtcttgattgaatatcacaagac 9220883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 40013718 - 40013878
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||| ||||||  ||| |||||||||||| ||||    
T  40013718 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccattaaaatccaattgattaaacaatccttcga 40013807  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||| ||| |||        || |||| || ||||||||||||||||| ||||||    
T  40013808 aatttgaatgattttgaataacacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagac 40013878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 37014044 - 37013944
Alignment:
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    |||||||  ||||||||||||| || |||||||||||||||||||||||||| | ||||       ||||||| || ||||||||||||||||| |||||    
T  37014044 caaaatccaatttattaaacaacccttcgaaatttgaatgattttgaataccgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 37013945  T
Q  251 c 251  Q
    |    
T  37013944 c 37013944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 16894044 - 16894078
Alignment:
Q  217 aagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||||||||||||||    
T  16894044 aagtgattaagagtcttgattgaataccacaagac 16894078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 149
Target Start/End: Original strand, 1511349 - 1511426
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagacttttt-catgctaaaatttcactagaaaa-tcccacaaaatcca 149  Q
    ||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||  |||||| |||| ||||||||||||||    
T  1511349 caatcctaaaaaatcttatgttttcataaaagatttttttcatgccaaaaactcactaaaaaaatcccacaaaatcca 1511426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 37014094 - 37014037
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 138  Q
    |||||||||||| |||| ||||||||||||||| || |||||||  |||| |||||||    
T  37014094 aagaaatctcatctttttatgaaagactttttcttgttaaaattatactacaaaatcc 37014037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 6e-83; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 24776563 - 24776362
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776563 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 24776464  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  24776463 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 24776364  T
Q  274 tt 275  Q
    ||    
T  24776363 tt 24776362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 16269923 - 16269698
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16269923 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactataaaatcccacaaaatcca 16269824  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  16269823 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 16269724  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  16269723 actttttttaaatgacaaagaatctt 16269698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 20605468 - 20605243
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20605468 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 20605369  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  20605368 tcaaaatctgatttattaaacaatccttcgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 20605269  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  20605268 actttttttaaatgacaaagaatctt 20605243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 31170602 - 31170827
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31170602 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 31170701  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  31170702 tcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 31170801  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  31170802 actttttttaaatgacaaagaatctt 31170827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 14198555 - 14198756
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14198555 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaatcca 14198654  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||    
T  14198655 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactggactttttttaagtgattaagagtcttgattgaataccacaag 14198754  T
Q  250 ac 251  Q
    ||    
T  14198755 ac 14198756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 12407612 - 12407387
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12407612 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatggtaaaatttcactagaaaatcccacaaaatcca 12407513  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||    
T  12407512 tcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaataccacaag 12407413  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  12407412 actttttttaaatgacaaagaatctt 12407387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 43847878 - 43847653
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  43847878 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgacagactttttcatgctaaaatttcactagaaaattccacaaaatcca 43847779  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||    
T  43847778 tcaaattctgatttattaaacaatccttcgaaatttgaatgattttgaatacaactagactttttttaagtgattaagagtcttgattgaataccacaag 43847679  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  43847678 actttttttaaatgacaaagaatctt 43847653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 305443 - 305644
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  305443 tagtaaaatcttaaaagaaataaacaatcctaagaaatctcatgttttcatgaaagactttttcattctaaaatttcactagaaaatctcacaaaatcca 305542  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    || ||||||||||||||||||||||  || ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  305543 tcgaaatctgatttattaaacaatcattcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 305642  T
Q  250 ac 251  Q
    ||    
T  305643 ac 305644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 5093049 - 5093250
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5093049 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 5093148  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || || |||||||||||||||||||||| |||||||       ||||||||||| |||||||||||||||||||||||       |||||||||||||||    
T  5093149 ccttcaaaatttgaatgattttgaatactactagactttttttaagtgattaagcgtcttgattgaataccacaagactttttttaaatgacaaagaatc 5093248  T
Q  274 tt 275  Q
    ||    
T  5093249 tt 5093250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 35317294 - 35317069
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35317294 tagtaaaatcttaaaagaaaaaaacaatgttaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcca 35317195  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||  |||||    
T  35317194 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatattacaag 35317095  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  35317094 actttttttaaatgacaaagaatctt 35317069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 22551741 - 22551966
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22551741 tagtaaaatcttaaaaggaaaaaacaatcataagaaatctcatgttttcatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatcca 22551840  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    ||||||| | ||||| |||||||||  ||||||||||||| |||||||||||||||||||       |||||||||| ||||||||||||||||||||||    
T  22551841 tcaaaatttaatttaataaacaatcattcgaaatttgaataattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacaag 22551940  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  22551941 actttttttaaatgacaaagaatctt 22551966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 94 - 275
Target Start/End: Complemental strand, 1789630 - 1789449
Alignment:
Q  94 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgatt 193  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1789630 ttttgatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 1789531  T
Q  194 ttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    ||||||||||||||||       |||||||||||||| ||||||||||| || |||||       |||||||||||||||||    
T  1789530 ttgaataccactagactttttttaagtgattaagagttttgattgaatatcataagactttttttaaatgacaaagaatctt 1789449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 80 - 247
Target Start/End: Complemental strand, 32125455 - 32125285
Alignment:
Q  80 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcg 179  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32125455 taagaaatctcatattttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 32125356  T
Q  180 aaatttgaatgattttgaataccactagacnnnnnnnaagtg---attaagagtcttgattgaataccaca 247  Q
    |||||||||||||||||||||||||| |||       || ||   ||||||||||||||||||||||||||    
T  32125355 aaatttgaatgattttgaataccacttgactttttttaaatgatcattaagagtcttgattgaataccaca 32125285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 9120358 - 9120157
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  9120358 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttccatactaaaatttcactagaaaatcccacaaaatcca 9120259  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    ||||||||| |||||||||||||||| |  |||| |||||||||||||||| |||||||        |||||||||||| ||||||||||||| ||||||    
T  9120258 tcaaaatctaatttattaaacaatcctttaaaatctgaatgattttgaatatcactagattttttttaagtgattaagaatcttgattgaataacacaag 9120159  T
Q  250 ac 251  Q
    ||    
T  9120158 ac 9120157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 44765974 - 44765782
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44765974 caatcctaagaaatctcatgttttcatgaaa---------atgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 44765884  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    |  |||||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||||       |||||||||||||||    
T  44765883 ctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaataccacaagactttttttaaatgacaaagaatc 44765784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 28844756 - 28844586
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| ||||||||||||||| |  ||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  28844756 aagaaatctcatctttttatgaaagactttttcttattaaaattacactacaaaattccacaaaatccatcaaaatctaatttattaaacaatccttcga 28844657  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  28844656 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 28844586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 33135823 - 33135654
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  33135823 aagaaatctcatttttt-atgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 33135725  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  33135724 aatttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 33135654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 81 - 244
Target Start/End: Complemental strand, 10657607 - 10657444
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||||| |||| ||||||||||| |||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||  ||||    
T  10657607 aagaaatttcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 10657508  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacc 244  Q
    |||||||||||||||||||||||| ||||       ||||||| || |||||||||||||||||    
T  10657507 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacc 10657444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 18177468 - 18177298
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| || |||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||| |||||||||||| ||||    
T  18177468 aagaaatctcatctttttattaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcga 18177369  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| | ||       || |||| || ||||||||||||||||| ||||||    
T  18177368 aatttgaatgattttgaataccacaaaactttttttaaatgatgaaaagtcttgattgaatacctcaagac 18177298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 25288360 - 25288190
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||| || || || ||||||| ||||| ||||||||||||||| ||||||||||  |||||||||||||||| ||||    
T  25288360 aagaaatctcatcttttcatgaaagacgttctcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 25288261  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| |||        ||||||| || |||||||| |||||||| ||||||    
T  25288260 aatttgaatgattttgaataccacaagattttttttaagtgatgaaaagtcttgaatgaatacctcaagac 25288190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 26788969 - 26788859
Alignment:
Q  99 atgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaa 198  Q
    ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| || |||||||||||||||||||    
T  26788969 atgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaa 26788870  T
Q  199 taccactagac 209  Q
    |||||| ||||    
T  26788869 taccacaagac 26788859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 43078764 - 43078653
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||||||| || |||| |||||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||  |||||||||||||||  ||||    
T  43078764 aagaaatcttatctttttatgaaagactttttcatgttaaaattacactataaaatcccacaaaatccatgaaaatccaatttattaaacaatcattcga 43078665  T
Q  181 aatttgaatgat 192  Q
    ||||||||||||    
T  43078664 aatttgaatgat 43078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 28740302 - 28740462
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| |||          |||||||||||||||||||  |||||||||||||||| ||||    
T  28740302 aagaaatctcatctttttatgaaagactttttcttgttaaaattacac----------cacaaaatccatcaaaatccaatttattaaacaatccttcga 28740391  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  28740392 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 28740462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 7026746 - 7026635
Alignment:
Q  140 acaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 239  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||       || |||| || ||||||||||||    
T  7026746 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattga 7026647  T
Q  240 ataccacaagac 251  Q
    ||||| ||||||    
T  7026646 atacctcaagac 7026635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 242
Target Start/End: Original strand, 13833441 - 13833592
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| || ||||||||||||||||| || ||||||| ||||| ||||||||||||||||||          |||||||||||||||| || |    
T  13833441 aagaaatctcatcttgtcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcaa 13833530  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaata 242  Q
    |||||||||||||||||||||||  ||||       ||||||| || |||||||||||||||    
T  13833531 aatttgaatgattttgaataccagaagactttttttaagtgatgaaaagtcttgattgaata 13833592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 26601214 - 26601379
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||| |||||| |||||||||| ||| ||||||  ||| |||| ||||||||||||||||||||||          ||||||||||||||||||     
T  26601214 caatcctaaaaaatct-atgttttcatcaaaaactttta-atgttaaagtttcactagaaaatcccacaaa----------atctgatttattaaacaaa 26601301  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |  ||||||||||||||||||||||||||||  |||       ||||||||||||||||||||||||||| |||||||    
T  26601302 cattcgaaatttgaatgattttgaataccacgtgactttttttaagtgattaagagtcttgattgaatactacaagac 26601379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 200
Target Start/End: Original strand, 10125302 - 10125418
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| ||||||||||| |||||| ||||||||||||||| || ||||||||||||| ||||||||||||||| ||          ||||||||||||||    
T  10125302 caatcttaagaaatctcgtgtttttatgaaagactttttcttgttaaaatttcactaaaaaatcccacaaaattca----------atttattaaacaat 10125391  T
Q  174 ccgtcgaaatttgaatgattttgaata 200  Q
    || | ||||||||||||||||||||||    
T  10125392 cctttgaaatttgaatgattttgaata 10125418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 3463863 - 3463703
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||| | ||    
T  3463863 aagaaatctcatattttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcctttga 3463774  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || |||||||||||| |||||||| ||||       || |||| || ||||||||||||| ||| ||||||    
T  3463773 aaattgaatgattttaaataccacaagactttttttaaatgatgaaaagtcttgattgaacacctcaagac 3463703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 3574978 - 3574878
Alignment:
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||||| ||| ||||       ||||||| || ||||||||||||||||| |||||    
T  3574978 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatatcacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 3574879  T
Q  251 c 251  Q
    |    
T  3574878 c 3574878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 379079 - 379016
Alignment:
Q  140 acaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaatacca 203  Q
    |||||||| |||||||||  |||||||||||||||| || ||||||||||||||||||||||||    
T  379079 acaaaatctatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaatacca 379016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 6224576 - 6224633
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 138  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||    
T  6224576 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 6224633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 215320 - 215404
Alignment:
Q  167 aaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||| | ||| |||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  215320 aaacaatcctttgaagtttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 215404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 6224626 - 6224684
Alignment:
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagac 209  Q
    |||||||  |||||||||| ||||| ||||||||||||| |||||||||||||| ||||    
T  6224626 caaaatccaatttattaaataatccttcgaaatttgaataattttgaataccacaagac 6224684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 215249 - 215303
Alignment:
Q  83 gaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 138  Q
    |||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||    
T  215249 gaaatctcatcttttcatgaaagactttttc-tgttaaaattacactacaaaatcc 215303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 20605209 - 20605159
Alignment:
Q  225 aagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    |||||||||||||||||||||||||||       |||||||||||||||||    
T  20605209 aagagtcttgattgaataccacaagactttttttaaatgacaaagaatctt 20605159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 21370638 - 21370687
Alignment:
Q  160 atttattaaacaatccgtcgaaatttgaatgattttgaataccactagac 209  Q
    |||||| ||||||| | || ||||||||||||||||||||||||| ||||    
T  21370638 atttatcaaacaatacttcaaaatttgaatgattttgaataccacaagac 21370687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 15009 - 15234
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15009 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 15108  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||    
T  15109 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 15208  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  15209 actttttttaaatgacaaagaatctt 15234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 15652 - 15877
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15652 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 15751  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||    
T  15752 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 15851  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  15852 actttttttaaatgacaaagaatctt 15877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 6e-80; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 40996624 - 40996849
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40996624 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatcca 40996723  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||    
T  40996724 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaag 40996823  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  40996824 actttttttaaatgacaaagaatctt 40996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 75 - 275
Target Start/End: Original strand, 43581090 - 43581290
Alignment:
Q  75 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43581090 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 43581189  T
Q  175 cgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatct 274  Q
    | |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||       ||||||||||||||||    
T  43581190 cttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaagactttttttaaatgacaaagaatct 43581289  T
Q  275 t 275  Q
    |    
T  43581290 t 43581290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 7718361 - 7718538
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7718361 caatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7718460  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  7718461 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 7718538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 18914710 - 18914911
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18914710 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 18914809  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    ||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  18914810 tcaaaatctgatttattaaacaaacctttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 18914909  T
Q  250 ac 251  Q
    ||    
T  18914910 ac 18914911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 973416 - 973191
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  973416 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatcca 973317  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||    
T  973316 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaaattttttttaagtgattaagagtcttgattgaataccacaag 973217  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  973216 actttttttaaatgacaaagaatctt 973191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 50 - 250
Target Start/End: Complemental strand, 30441028 - 30440828
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30441028 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcacgaaagactttttcatactaaaatttcactagaaaatcccacaaaatcca 30440929  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  30440928 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 30440829  T
Q  250 a 250  Q
    |    
T  30440828 a 30440828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 7719259 - 7719436
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7719259 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7719358  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |  ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  7719359 cattcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaataccacaagac 7719436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 50 - 248
Target Start/End: Complemental strand, 34695505 - 34695307
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34695505 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 34695406  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 248  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||       ||||||||||||||||||||||||||||||||    
T  34695405 tcaaaatctgatttattaaacaatccttcgaaatttgaatggttttgaataccactggactttttttaagtgattaagagtcttgattgaataccacaa 34695307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 47914498 - 47914273
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47914498 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 47914399  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||| |    
T  47914398 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47914299  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  47914298 actttttttaaatgacaaagaatctt 47914273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 12893616 - 12893415
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12893616 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaat 12893517  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
     | ||||||||||||||||||||||||||| |||||       ||||||||||||||||||||| |||||||||||||       |||||||||||||||    
T  12893516 tcttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattaaataccacaagactttttttaaatgacaaagaatc 12893417  T
Q  274 tt 275  Q
    ||    
T  12893416 tt 12893415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 44343395 - 44343596
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44343395 caatcctaagaaatctcatgttttcgtgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44343494  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || ||||||||||||||||||| |||||||||| ||       |||||||||||||||||||||||||| ||||||||       |||||||||||||||    
T  44343495 ccttcgaaatttgaatgattttaaataccactaaactttttttaagtgattaagagtcttgattgaatatcacaagactttttttaaatgacaaagaatc 44343594  T
Q  274 tt 275  Q
    ||    
T  44343595 tt 44343596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 47879400 - 47879175
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47879400 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcca 47879301  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||| |    
T  47879300 tcaaaatctgatttattaaacaatccttttaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47879201  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  47879200 actttttttaaatgacaaagaatctt 47879175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 39219352 - 39219552
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39219352 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 39219451  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||| | || |||||||||||||||||||||||| |||||       |||||||||||||||||||||||||| ||||||    
T  39219452 tcaaaatctgatttattaaacaat-catcaaaatttgaatgattttgaataccaatagactttttttaagtgattaagagtcttgattgaataacacaag 39219550  T
Q  250 ac 251  Q
    ||    
T  39219551 ac 39219552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 20275238 - 20275439
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  20275238 tagtaaaatcttaaaagaaaaaaacaatgctaagaaatctcatgctttcatgacagactttttcatgctaaaatttcactaaaaaatcccacaaaatcca 20275337  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||       ||||||||||||||||||||||||||||| |||    
T  20275338 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccataagactttttttaagtgattaagagtcttgattgaataccataag 20275437  T
Q  250 ac 251  Q
    ||    
T  20275438 ac 20275439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 34009245 - 34009043
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||| ||||||||||||| |||||||||||| | |||||||| ||||||||||||    
T  34009245 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcttgaaagacttttttatgctaaaattttattagaaaattccacaaaatcca 34009146  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccacta-gacnnnnnnnaagtgattaagagtcttgattgaataccacaa 248  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||       |||||||||||||| |||||||||||||||||    
T  34009145 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaggactttttttaagtgattaagagtgttgattgaataccacaa 34009046  T
Q  249 gac 251  Q
    |||    
T  34009045 gac 34009043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 32142916 - 32143095
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32142916 caatcttaagaaatctcatgtttttatggaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 32143015  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagac--nnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || || |||||||||||||||||||||||||  |||         ||||||||||||||||||||| ||||||| |||||    
T  32143016 ccttcaaaatttgaatgattttgaataccacgtgacttttttttgaagtgattaagagtcttgattcaataccataagac 32143095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 74 - 244
Target Start/End: Complemental strand, 10068668 - 10068498
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  10068668 caatcctaacaaatctcatgtttttatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttattaaacaat 10068569  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacc 244  Q
    || || ||||||||||||||||||||||||| ||||       ||||||| || | |||||||||||||||    
T  10068568 ccttcaaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaatacc 10068498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 7113660 - 7113529
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||    
T  7113660 caatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaattttcctagaaaatcccacaaaatctatcaaaatctgatttattaaacaat 7113561  T
Q  174 ccgtcgaaatttgaatgattttgaataccact 205  Q
    ||  |||||||||||| |||||||||||||||    
T  7113560 cctgcgaaatttgaattattttgaataccact 7113529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 23101492 - 23101322
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  23101492 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 23101393  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  23101392 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 23101322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 43679592 - 43679491
Alignment:
Q  104 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaatacca 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43679592 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 43679493  T
Q  204 ct 205  Q
    ||    
T  43679492 ct 43679491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 3023120 - 3022950
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  3023120 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 3023021  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || | ||||||||||||||| ||||||    
T  3023020 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaatacctcaagac 3022950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 28342541 - 28342371
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  28342541 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 28342442  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||| ||||||||||| ||||||    
T  28342441 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtctcgattgaatacctcaagac 28342371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 29614770 - 29614940
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  29614770 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29614869  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||| ||| ||||       || |||| || ||||||||||||||||| ||||||    
T  29614870 aatttgaatgattttgaatatcacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 29614940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 39784293 - 39784123
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  39784293 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 39784194  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||| |||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  39784193 aatttaaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 39784123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 18838583 - 18838413
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||  ||||    
T  18838583 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatctttcga 18838484  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||| ||| || ||||||||||||||||| ||||||    
T  18838483 aatttgaatgattttgaataccacaagactttttttaagcgatgaaaagtcttgattgaatacctcaagac 18838413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 33382828 - 33382661
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    ||||||||| ||||||| |||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  33382828 aaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 33382729  T
Q  184 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || |||||||||||||||||  ||||       ||||||| || ||||||||||||||||| ||||||    
T  33382728 ttaaatgattttgaataccatgagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 33382661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 8675527 - 8675357
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||| ||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  8675527 aagaaatctcatcttttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 8675428  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    | ||| |||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  8675427 agtttaaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 8675357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 9882243 - 9882412
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| ||||||||||||||| |  ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||  ||||    
T  9882243 aagaaatctcatttttt-atgaaagactttttcttcttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 9882341  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  9882342 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 9882412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 28034811 - 28034981
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||  || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| | ||    
T  28034811 aagaaatctcatcttttcatgaaagacttttttttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 28034910  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||| |||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||    
T  28034911 aatttgaataattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagac 28034981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 12963874 - 12963767
Alignment:
Q  102 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaatac 201  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  12963874 aaagactttttcttactaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattttggatac 12963775  T
Q  202 cactagac 209  Q
    ||| ||||    
T  12963774 cacgagac 12963767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 7993336 - 7993166
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||||||| || |||||||||||||||||||| || ||||||| ||||| ||||||||||| |||||||||||||   |||||||||||||||| ||||    
T  7993336 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacacaatccatcaaaattcaatttattaaacaatccttcga 7993237  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||  ||||       ||||||| || ||| ||||||||||||| ||||||    
T  7993236 aatttgaatgattttgaataccataagactttttttaagtgatgaaaagttttgattgaatacctcaagac 7993166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 74 - 203
Target Start/End: Original strand, 43187356 - 43187485
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||| || ||||||||||| |||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||  ||||||||||||||    
T  43187356 caatcccaaaaaatctcatgtcttcatgaaagactttttcttgttaaaatttcactagaaaatccgacaaaattcatcaaaatccaatttattaaacaat 43187455  T
Q  174 ccgtcgaaatttgaatgattttgaatacca 203  Q
     | || ||||||||||||||||||||||||    
T  43187456 gcttcaaaatttgaatgattttgaatacca 43187485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 9180071 - 9179880
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||          ||||||||||||||    
T  9180071 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaaattcactagaaaatcccacaaaatcca----------atttattaaacaat 9179982  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || ||| ||||| | |||||||| ||||||| ||||       ||||||| ||||||||||||||||||| |||| ||       |||||||||||||||    
T  9179981 ccttcggaatttaagtgattttgtataccacaagactttttttaagtgatgaagagtcttgattgaatacgacaaaactttttttaaatgacaaagaatc 9179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 142 - 247
Target Start/End: Complemental strand, 31639015 - 31638910
Alignment:
Q  142 aaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaat 241  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||    
T  31639015 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgatagaat 31638916  T
Q  242 accaca 247  Q
    ||||||    
T  31638915 accaca 31638910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 209
Target Start/End: Complemental strand, 12740573 - 12740439
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| ||||||||||||| |||| |||||||||||| || || ||||||| ||||| |||||||||||||||| |||||||||  ||||||||||||||    
T  12740573 caatcttaagaaatctcatctttttatgaaagactttctcttgttaaaattacactataaaatcccacaaaatctatcaaaatc-catttattaaacaat 12740475  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagac 209  Q
    || | |||||||||||||||||||||||||| ||||    
T  12740474 cctttgaaatttgaatgattttgaataccacgagac 12740439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 3797066 - 3797233
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||    
T  3797066 caatcctaagaaatct-atgttttcttaaaagactttttcatgctaaaatttcactagaaaatc---------ccatcaaaatctaatttattaaacaat 3797155  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || || |||||| |||||| ||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  3797156 ccttcaaaattttaatgatcttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 3797233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 727692 - 727587
Alignment:
Q  93 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgat 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||| | ||||||||||||||    
T  727692 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa----------aatctgatttattaaacaatcctttgaaatttgaatgat 727603  T
Q  193 tttgaataccactaga 208  Q
    ||||||||| ||||||    
T  727602 tttgaatactactaga 727587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 204
Target Start/End: Complemental strand, 25805862 - 25805763
Alignment:
Q  105 gactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccac 204  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| |||   ||||||||||||||||  |||||||||||||||||||||||||||    
T  25805862 gactttttcatgctaaaattttattagaaaatcccacaaaatccatcataattcaatttattaaacaatcctacgaaatttgaatgattttgaataccac 25805763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 251
Target Start/End: Original strand, 10676463 - 10676596
Alignment:
Q  118 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnna 217  Q
    ||||||||||| ||||||| ||| |||||||||| |||||  |||||||||||||||| ||||||||||||||||||||||||| |  ||||       |    
T  10676463 taaaatttcacaagaaaattccataaaatccatccaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatacaatgagacttttttta 10676562  T
Q  218 agtgattaagagtcttgattgaataccacaagac 251  Q
    |||||| || ||||||||||||||||||||||||    
T  10676563 agtgatgaaaagtcttgattgaataccacaagac 10676596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 37972873 - 37972981
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||| |||||| |||||||||||||||||||| || ||||||| ||||| |||||||| |||||||||||||||||  |||||||||| ||||| ||||    
T  37972873 aagaagtctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccgcaaaatccatcaaaatccaatttattaaataatccttcga 37972972  T
Q  181 aatttgaat 189  Q
    |||||||||    
T  37972973 aatttgaat 37972981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 84 - 244
Target Start/End: Original strand, 44256775 - 44256935
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    ||||||||| |||| |||||| |||||||| || ||||||| ||||  ||||||| ||||||| |||| |||||  |||||||||||||||  |||||||    
T  44256775 aaatctcatattttgatgaaaaactttttcttgttaaaattacactgcaaaatccaacaaaattcatccaaatccaatttattaaacaatcattcgaaat 44256874  T
Q  184 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacc 244  Q
    ||||||||||||||||||||| | ||       ||||||| || |||||||||||||||||    
T  44256875 ttgaatgattttgaataccacgatactttttttaagtgatgaaaagtcttgattgaatacc 44256935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 251
Target Start/End: Complemental strand, 19251729 - 19251563
Alignment:
Q  75 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 174  Q
    ||||| ||||||| ||| ||||||||||||||||||||  |||||||||||||| |||||||||  |||||||||          |||||||||||||||    
T  19251729 aatcccaagaaatttcaggttttcatgaaagactttttattgctaaaatttcacaagaaaatccatcaaaatcca----------atttattaaacaatc 19251640  T
Q  175 cgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    | |||||||||||||||||||||||||||| ||||       ||||||| || | | ||||||||||||| ||||||    
T  19251639 cttcgaaatttgaatgattttgaataccacgagactttttttaagtgatgaaaaattttgattgaatacctcaagac 19251563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 19810983 - 19810874
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||          |||||||||||||||  | ||    
T  19810983 aagaaatctcatgttttcatgaaagacatttttatgctaaaatttcactagaaaattccacaaaatcca----------atttattaaacaatcatttga 19810894  T
Q  181 aatttgaatgattttgaata 200  Q
    ||||||||||||||||||||    
T  19810893 aatttgaatgattttgaata 19810874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 41827498 - 41827390
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||| ||||| || ||||||| ||||| | ||||||||||||||||||||||||  |||||||||||||||| || |    
T  41827498 aagaaatctcatattttcatgaaagacattttcttgttaaaattacactacacaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 41827399  T
Q  181 aatttgaat 189  Q
    | |||||||    
T  41827398 attttgaat 41827390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 44121919 - 44122076
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    ||||||||| ||||||| |||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||| |||||||    
T  44121919 aaatctcatcttttcattaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcgaaat 44122008  T
Q  184 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||||||||||||||| |||        ||||||| || ||||||||||||||||| ||||||    
T  44122009 ttgaatgattttgaataccacaagattttttttaagtgatgaaaagtcttgattgaatacctcaagac 44122076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 509840 - 509680
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||  |||||          |||||||||||||||||  |||||||||||||||  ||||    
T  509840 aagaaatctcatcttttcatgaaagactttttcttgttaaaatcccacta----------caaaatccatcaaaatccaatttattaaacaatcgttcga 509751  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  509750 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 509680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 40460723 - 40460883
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||  ||||    
T  40460723 aagaaatctcatattttcatgaaagattttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcattcga 40460812  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||    
T  40460813 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagac 40460883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 32883948 - 32883814
Alignment:
Q  109 ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactaga 208  Q
    ||||| || ||||||| ||||| |||||||||| |||||||||||||||  ||||| |||||||||  |||||||||||||||||||||||||||| |||    
T  32883948 ttttcttgttaaaattacactacaaaatcccacgaaatccatcaaaatccaatttaataaacaatcattcgaaatttgaatgattttgaataccacaaga 32883849  T
Q  209 cnnnnnnnaagtgattaagagtcttgattgaatac 243  Q
    |       ||||||| || |||||| |||||||||    
T  32883848 ctttttttaagtgatgaaaagtcttaattgaatac 32883814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 46405494 - 46405607
Alignment:
Q  138 ccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgatt 237  Q
    ||||||||||||||||||||  |||||||||||||||  | |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||    
T  46405494 ccacaaaatccatcaaaatccaatttattaaacaatcatttgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgatt 46405593  T
Q  238 gaataccacaagac 251  Q
    ||||||| ||||||    
T  46405594 gaatacctcaagac 46405607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 37328062 - 37327951
Alignment:
Q  140 acaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 239  Q
    |||||||||||||||||   |||||||||||||||| | |||||||||||||||||||||||||| ||||       |||| || || ||||||||||||    
T  37328062 acaaaatccatcaaaattcaatttattaaacaatcctttgaaatttgaatgattttgaataccacaagactttttttaagtaatgaaaagtcttgattga 37327963  T
Q  240 ataccacaagac 251  Q
    ||||| ||||||    
T  37327962 atacctcaagac 37327951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 1470213 - 1470362
Alignment:
Q  52 gtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 151  Q
    |||||||||||||||       |||| ||| ||||||||  |||||||  ||||| |||||||||||||||||| |  |||||||||||||||| | |||    
T  1470213 gtaaaatcttaaaagaaaaaaacaatgctaggaaatctc--gttttcaaaaaagattttttcatgctaaaattttatcagaaaatcccacaaaa-ctatc 1470309  T
Q  152 aaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccac 204  Q
    ||||||| ||| |||||||||| | |  ||||||||| |||||||||||||||    
T  1470310 aaaatctaattcattaaacaatgctttaaaatttgaacgattttgaataccac 1470362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 33892269 - 33892426
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    ||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||| ||| ||||||  ||||||| |||||||  |||||||    
T  33892269 aaatctcatcttttaatgaaagactttttcttgttaaaattacacta----------caaaattcataaaaatccaatttatttaacaatcattcgaaat 33892358  T
Q  184 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  33892359 ttgaatgattttgaataccacaagactttgtttaagtgatgaaaagtcttgattgaatacctcaagac 33892426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 44623295 - 44623452
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    |||| |||| |||| |||| |||||||||||| |||||||||||||||||||| ||||||||| ||          |||||||||||| ||  | |||||    
T  44623295 aaatatcatatttttatgagagactttttcattctaaaatttcactagaaaattccacaaaattca----------atttattaaacagtctttagaaat 44623384  T
Q  184 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
     |||||||||||||||| ||| ||||       ||||||| ||||||||||||| |||||||||||||    
T  44623385 atgaatgattttgaatatcacgagacctttttaaagtgatgaagagtcttgattaaataccacaagac 44623452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 10617102 - 10617024
Alignment:
Q  91 atgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaa 169  Q
    ||||||| ||||||||||| ||  | ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  10617102 atgtttttatgaaagacttgttattactaaaatatcactagaaaatctcacaaaatccatcaaaatctaatttattaaa 10617024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 275
Target Start/End: Complemental strand, 29585698 - 29585515
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||||| |||| |||| ||||||||||||||| || ||||||| ||||          ||||||||||||||||||  | |||||||||||||| || |    
T  29585698 aagaaatttcatctttttatgaaagactttttcttgttaaaattacact----------acaaaatccatcaaaatccaaattattaaacaatccttcaa 29585609  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    |||||||||||||||||||||||  ||||       |||||| ||| ||| ||||||||||||| ||||||       |||||||||||||||||    
T  29585608 aatttgaatgattttgaataccagaagactttttttaagtga-taaaagttttgattgaatacctcaagacttttttaaaatgacaaagaatctt 29585515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 39028232 - 39028121
Alignment:
Q  140 acaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 239  Q
    ||||||||||||||||||  |||||||||||||||  ||| |||||||| ||||||||||| ||| ||||       ||||||| || ||||||||||||    
T  39028232 acaaaatccatcaaaatccaatttattaaacaatctttcgtaatttgaacgattttgaataacacaagactttttttaagtgatgaaaagtcttgattga 39028133  T
Q  240 ataccacaagac 251  Q
    ||| | ||||||    
T  39028132 atatctcaagac 39028121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 47066828 - 47066770
Alignment:
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagac 209  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  47066828 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 47066770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 17001099 - 17001152
Alignment:
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccac 204  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||||||||||    
T  17001099 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 17001152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 447913 - 447854
Alignment:
Q  145 atccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccac 204  Q
    |||||||||||||  ||| |||||||||||  ||||||||||||||||||| ||||||||    
T  447913 atccatcaaaatccaattaattaaacaatcattcgaaatttgaatgattttaaataccac 447854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 17001049 - 17001106
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 138  Q
    |||||||||||| |||||||||||||||||||| || || |||| ||||| |||||||    
T  17001049 aagaaatctcatattttcatgaaagactttttcttgttataattacactacaaaatcc 17001106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 250
Target Start/End: Complemental strand, 8078457 - 8078428
Alignment:
Q  221 gattaagagtcttgattgaataccacaaga 250  Q
    ||||||||||||||||||||||||||||||    
T  8078457 gattaagagtcttgattgaataccacaaga 8078428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 47066878 - 47066821
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 138  Q
    |||||||||||| ||||||||||| | |||||| || ||||||| ||||| |||||||    
T  47066878 aagaaatctcatcttttcatgaaatattttttcttgttaaaattacactacaaaatcc 47066821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 6e-80; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 25331361 - 25331136
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25331361 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 25331262  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||    
T  25331261 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacaag 25331162  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  25331161 actttttttaaatgacaaagaatctt 25331136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 41881082 - 41881284
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41881082 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 41881181  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaat 272  Q
    || |||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  41881182 ccttcgaaatttgaatgattttgaataccactaaacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaat 41881281  T
Q  273 ctt 275  Q
    |||    
T  41881282 ctt 41881284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 55303049 - 55302848
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  55303049 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaatatccatcaaaatctgatttattaaacaat 55302950  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||       |||||||||||||||    
T  55302949 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgacttttttaaaatgacaaagaatc 55302850  T
Q  274 tt 275  Q
    ||    
T  55302849 tt 55302848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 52 - 251
Target Start/End: Complemental strand, 1045035 - 1044836
Alignment:
Q  52 gtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 151  Q
    |||||||||||||||       |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1045035 gtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 1044936  T
Q  152 aaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  1044935 aaaatctgatttattaaacaatccttcgaaagttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 1044836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 1113099 - 1112898
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  1113099 caatcctaagaaatctcatgttttcatgaaagactttttcatgttaaaattttactaggaaatcccacaaaatccatcaaaatctgatttattaaacaat 1113000  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    |  | |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  1112999 catttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 1112900  T
Q  274 tt 275  Q
    ||    
T  1112899 tt 1112898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 12113151 - 12112950
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12113151 caatcccaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccattaaaatctgatttattaaacaat 12113052  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || ||||||||||||||||||||||||||| |||||       |||||||||||||| ||||||||||||||||||||       |||||||||||||||    
T  12113051 ccttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagttttgattgaataccacaagactttttttaaatgacaaagaatc 12112952  T
Q  274 tt 275  Q
    ||    
T  12112951 tt 12112950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 75 - 247
Target Start/End: Original strand, 32950837 - 32951009
Alignment:
Q  75 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 174  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32950837 aatcttaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaatc 32950936  T
Q  175 cgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccaca 247  Q
    | |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  32950937 cttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccaca 32951009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 34228559 - 34228784
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34228559 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatcca 34228658  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||       |||||||||||| | |||||||||||||||| |    
T  34228659 tcaaaatctgatttattaaacaatcattcgaaatttcaatgattttgaataccactagactttttttaagtgattaagaattttgattgaataccacatg 34228758  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  34228759 actttttttaaatgacaaagaatctt 34228784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 74 - 247
Target Start/End: Complemental strand, 7007580 - 7007407
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7007580 caatcttaagaaatctcatgttttcatgaaaaaaattttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaat 7007481  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccaca 247  Q
    || |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  7007480 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccaca 7007407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 42786890 - 42786713
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  42786890 caatcataagaaatctcatgttttcatgaaagacttttttatgataaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaat 42786791  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || |||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||    
T  42786790 ccttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaagac 42786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 22202221 - 22202020
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  22202221 caatgctaagaaatctaatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaattttatttattaaacaat 22202122  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    |  | ||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  22202121 cttttgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 22202022  T
Q  274 tt 275  Q
    ||    
T  22202021 tt 22202020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 50 - 247
Target Start/End: Original strand, 30009653 - 30009850
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30009653 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatcca 30009752  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccaca 247  Q
    |||||||||||||||||||||||||  |  |||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  30009753 tcaaaatctgatttattaaacaatcatttaaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccaca 30009850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 51 - 251
Target Start/End: Original strand, 39479332 - 39479534
Alignment:
Q  51 agtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccat 150  Q
    ||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39479332 agtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgctttcatgaaagactttttcctgctaaaatttcactagaaaatcccacaaaatccat 39479431  T
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagac--nnnnnnnaagtgattaagagtcttgattgaataccacaa 248  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| || |         ||||||||||||||||||||||||||||||||    
T  39479432 caaaatctgatttattaaacaattcttcgaaatttgaatgattttgaataccacaagtctttttttttaagtgattaagagtcttgattgaataccacaa 39479531  T
Q  249 gac 251  Q
    |||    
T  39479532 gac 39479534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 37046450 - 37046653
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaattt-cactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 172  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  37046450 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaattttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaa 37046549  T
Q  173 tccgtcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaa 271  Q
    ||| ||||||||||||||||||| |||| ||||||||        |||||||||||||||||||||||||||||||| ||       |||||||||||||    
T  37046550 tccttcgaaatttgaatgattttaaatatcactagacttttttttaagtgattaagagtcttgattgaataccacaaaactttttttaaatgacaaagaa 37046649  T
Q  272 tctt 275  Q
    ||||    
T  37046650 tctt 37046653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 52 - 237
Target Start/End: Complemental strand, 41321038 - 41320853
Alignment:
Q  52 gtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 151  Q
    |||||||||||||||       ||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  41321038 gtaaaatcttaaaagaaaaaatcaatcttaagaaatctcatgtttttatgaaagactttttcatactaaaatttcactagaacatcccacaaaatccatc 41320939  T
Q  152 aaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgatt 237  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       || ||||||||||||||||||    
T  41320938 aaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgatt 41320853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 50 - 250
Target Start/End: Complemental strand, 3436823 - 3436623
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||| ||    
T  3436823 tagtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaaaactttttcatgttaaaatttcactacaaaatcccacaaaattca 3436724  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||        || ||||||||||||||||||||||| ||||||    
T  3436723 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagattttttttaaatgattaagagtcttgattgaatatcacaag 3436624  T
Q  250 a 250  Q
    |    
T  3436623 a 3436623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 103 - 250
Target Start/End: Complemental strand, 25446227 - 25446080
Alignment:
Q  103 aagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaatacc 202  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  25446227 aagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacc 25446128  T
Q  203 actagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    |||||||       ||||||||||||||||||||||||||||||||||    
T  25446127 actagactttttttaagtgattaagagtcttgattgaataccacaaga 25446080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 104 - 275
Target Start/End: Complemental strand, 28541874 - 28541703
Alignment:
Q  104 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaatacca 203  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  28541874 agactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacca 28541775  T
Q  204 ctagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    ||||||       |||||||||||||||||||||||||||||| ||||       |||||||||||||||||    
T  28541774 ctagactttttttaagtgattaagagtcttgattgaataccacgagactttttttaaatgacaaagaatctt 28541703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 46635648 - 46635843
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||      ||||| ||||||||||||||    
T  46635648 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatc------aatcttatttattaaacaat 46635741  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || ||||||||||||||||||||||||| |||| ||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  46635742 ccttcgaaatttgaatgattttgaatactactaaactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 46635841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 95 - 275
Target Start/End: Original strand, 19740929 - 19741109
Alignment:
Q  95 tttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattt 194  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  19740929 tttcatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattt 19741028  T
Q  195 tgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    | |||||||| ||||       |||||||||| |||||||| ||||||||||| |||       |||||||||||||||||    
T  19741029 ttaataccacaagactttttttaagtgattaaaagtcttgactgaataccacatgactttttataaatgacaaagaatctt 19741109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 51 - 275
Target Start/End: Original strand, 31314719 - 31314929
Alignment:
Q  51 agtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccat 150  Q
    ||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  31314719 agtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccca---------- 31314808  T
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||    |||||||||||||||    
T  31314809 caaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc----ttgaataccacaaga 31314904  T
Q  251 cnnnnnnnaaatgacaaagaatctt 275  Q
    |       |||||||||||||||||    
T  31314905 ctttttttaaatgacaaagaatctt 31314929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 24130957 - 24131173
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagacttttt-catgctaaaatttcactagaaaatcccacaaaatcc 148  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  24130957 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttttcatcctaaaatttcactagaaaatcccacaaaatcc 24131056  T
Q  149 atcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 248  Q
    ||||||||||||||||||||||||||  ||||||          |||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  24131057 atcaaaatctgatttattaaacaatcattcgaaa----------tttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaa 24131146  T
Q  249 gacnnnnnnnaaatgacaaagaatctt 275  Q
    |||       |||||||||||||||||    
T  24131147 gactttttttaaatgacaaagaatctt 24131173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 104 - 209
Target Start/End: Original strand, 7249795 - 7249900
Alignment:
Q  104 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaatacca 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7249795 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 7249894  T
Q  204 ctagac 209  Q
    ||||||    
T  7249895 ctagac 7249900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 5441603 - 5441433
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  5441603 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 5441504  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  5441503 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 5441433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 27768255 - 27768085
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  27768255 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 27768156  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  27768155 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 27768085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 54341343 - 54341173
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  54341343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 54341244  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  54341243 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 54341173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 53276046 - 53275868
Alignment:
Q  74 caatcctaagaaatctcatgttttca-tgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 172  Q
    ||||||||| |||||| | ||||| | |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||    
T  53276046 caatcctaaaaaatctaaagtttttaatgaaagactttttcatgctaaaattttattagaaaatctcacaaaatccatcaaaatctgatttattacacaa 53275947  T
Q  173 tccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||| ||||||||||||||||||| |||| ||||||||       |||||||||| | |||||||||||||| |||||||    
T  53275946 tccttcgaaatttgaatgattttaaatatcactagactttttttaagtgattaaaaatcttgattgaatactacaagac 53275868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 37828409 - 37828579
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| |  ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  37828409 aagaaatctcatcttttcatgaaagactttttctttttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 37828508  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || | ||||||||||||||| ||||||    
T  37828509 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagac 37828579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 51321120 - 51320950
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||||| |||||  |||||||||||||||||||  |||||||||||||||| ||||    
T  51321120 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactataaaattacacaaaatccatcaaaatccaatttattaaacaatccttcga 51321021  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  51321020 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 51320950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 74 - 206
Target Start/End: Original strand, 27454078 - 27454210
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| ||| |||| | ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| |||    
T  27454078 caatcttaacaaatattatgttttcatgaaagactttttcatgccaaaatttcactagaaaattccacaaaattcatcaaaatctgatttattaaataat 27454177  T
Q  174 ccgtcgaaatttgaatgattttgaataccacta 206  Q
    |  || |||||||||||||||||||||||||||    
T  27454178 ctttcaaaatttgaatgattttgaataccacta 27454210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 23465117 - 23464993
Alignment:
Q  118 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnna 217  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||       |    
T  23465117 taaaatttaactagaaaatcccacaaaatccatcaaattctgatttattaaacaatccttcgaaatttgaatggttttgaataccactagacttatttta 23465018  T
Q  218 agtgattaagagtcttgattgaata 242  Q
    |||||||||||||||||||||||||    
T  23465017 agtgattaagagtcttgattgaata 23464993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 37916023 - 37915856
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    |||||| || |||||||||| ||||||||| || ||||| | ||||| ||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  37916023 aaatcttatcttttcatgaatgactttttcttgttaaaagtacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 37915924  T
Q  184 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  37915923 ttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 37915856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 54853475 - 54853637
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| | ||    
T  54853475 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 54853574  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatac 243  Q
    ||||||||| |||||||||||||| ||||       ||||||| || ||||||||||||||||    
T  54853575 aatttgaataattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatac 54853637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 48261326 - 48261198
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| || |    
T  48261326 aagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 48261227  T
Q  181 aatttgaatgattttgaataccactagac 209  Q
    |||||||||||||||||||||||| ||||    
T  48261226 aatttgaatgattttgaataccacaagac 48261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 9163274 - 9163105
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| |||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  9163274 caatcataagaaatctcatgttttcatga--------ttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatttaatttattaaacaat 9163183  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || |||||||||||||||||||||||| ||| ||||       | ||||| || | ||||||||||||||||||||||    
T  9163182 ccttcgaaatttgaatgattttgaatatcacaagactttttttatgtgatgaaaaatcttgattgaataccacaagac 9163105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 25504696 - 25504815
Alignment:
Q  131 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||       ||||||||||||||    
T  25504696 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatatcactggactttttttaagtgattaagagt 25504795  T
Q  231 cttgattgaataccacaaga 250  Q
    |||||||||||| |||||||    
T  25504796 cttgattgaatatcacaaga 25504815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 32322290 - 32322120
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| ||||||||| ||||| |  ||||||| ||||| |||||||||||||||||||||||||   |||||||||||||||| ||||    
T  32322290 aagaaatctcatctttttatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatccttcga 32322191  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || | ||||||||||||||| ||||||    
T  32322190 aatttgaatgattttgaataccacaagactatttttaagtgatgaaaaatcttgattgaatacctcaagac 32322120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 251
Target Start/End: Original strand, 40537161 - 40537322
Alignment:
Q  75 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||| ||||||||||||||||    
T  40537161 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca----------ccacaaaatccatcaaaatcagatttattaaacaatc 40537250  T
Q  175 cgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
      ||||||||| ||||||||||||||||     ||       |||||||||||||| ||||||||||||||||||||    
T  40537251 attcgaaatttaaatgattttgaatacc-----acattttttaagtgattaagagttttgattgaataccacaagac 40537322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 44770862 - 44770982
Alignment:
Q  83 gaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaa 182  Q
    ||||||||||||  ||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| || |||    
T  44770862 gaaatctcatgtcgtcatgaaagactttttcttcttaaaatttcactagaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcaaaa 44770961  T
Q  183 tttgaatgattttgaatacca 203  Q
    |||||||||||||||||||||    
T  44770962 tttgaatgattttgaatacca 44770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 39307253 - 39307430
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||| ||||||||||||||||||| || | | ||||||||||| ||||||||||||||||||||||||||||| ||||||||    ||| |||||| |||    
T  39307253 caattctaagaaatctcatgtttttatcagaaactttttcatgttaaaatttcactagaaaatcccacaaaattcatcaaaactcaattcattaaataat 39307352  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |  | ||||||||||||||| |||||||||| ||||       || |||| |||| ||||||||||||||||||||||    
T  39307353 ctttagaaatttgaatgattatgaataccacaagactttttttaaatgatgaagaatcttgattgaataccacaagac 39307430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 23987403 - 23987243
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||| |||||||||||||||| ||||    
T  23987403 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatctaatttattaaacaatccttcga 23987314  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||| ||||||||||||| ||||||    
T  23987313 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagttttgattgaatacctcaagac 23987243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 8712065 - 8711978
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 168  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  8712065 aagaaatctcatgttttgatgaaagactttttcttgctaaaatttcactataaaatcccacaaaatccatcaaaatccaatttattaa 8711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 81 - 203
Target Start/End: Complemental strand, 12913413 - 12913301
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||||| ||||||||| |||||||| || ||||||||||||||||||||||||||||||||          |||||||||||||||| || |    
T  12913413 aagaaatctcatgtcttcatgaaatactttttcttgttaaaatttcactagaaaatcccacaaaatcca----------atttattaaacaatccttcaa 12913324  T
Q  181 aatttgaatgattttgaatacca 203  Q
    |||||||||||||||||||||||    
T  12913323 aatttgaatgattttgaatacca 12913301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 24736534 - 24736447
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 168  Q
    ||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  24736534 aagaaatctcatgttttcatgaaagacttcttcttgttaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaa 24736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 56445362 - 56445474
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||||||||||||          |||||||||||||||  ||||    
T  56445362 aagaaatctcatgtctttatgaaagactttttcttgctaaagtttcactagaaaatcccacaaaatcca----------atttattaaacaatcattcga 56445451  T
Q  181 aatttgaatgattttgaatacca 203  Q
    |||||||||||||||||||||||    
T  56445452 aatttgaatgattttgaatacca 56445474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 41725321 - 41725196
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||| ||||||||||  ||   ||||||||||| || |    
T  41725321 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactataaaatcccacaaaattcatcaaaatccaat---ttaaacaatccttcaa 41725225  T
Q  181 aatttgaatgattttgaataccactagac 209  Q
    |||||||||||||||||||| ||| ||||    
T  41725224 aatttgaatgattttgaatatcacaagac 41725196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 29649731 - 29649844
Alignment:
Q  138 ccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgatt 237  Q
    ||||||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||    
T  29649731 ccacaaaatccatcaaaatccaatttattaaacaatctttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgatt 29649830  T
Q  238 gaataccacaagac 251  Q
    ||||||| ||||||    
T  29649831 gaatacctcaagac 29649844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 11090510 - 11090435
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  11090510 caatcctaagaaatctcatgtttttattaaagactttttaatgctaaaatttcactaaaaaatcccacaaaatcca 11090435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 75 - 251
Target Start/End: Complemental strand, 28484093 - 28483928
Alignment:
Q  75 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 174  Q
    |||| ||||||||||| | |||||||||||||||||||| || |||| || ||||| ||||||| ||||||||||          |||||||||| ||||    
T  28484093 aatcttaagaaatctcgtcttttcatgaaagactttttcttgttaaa-ttacactacaaaatcctacaaaatcca----------atttattaaataatc 28484005  T
Q  175 cgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    | |||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  28484004 cttcgaaatttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 28483928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 244
Target Start/End: Original strand, 30967316 - 30967469
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||||||| || ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||||||          |||||||||||||||| | ||    
T  30967316 aagaaatcttattttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcctttga 30967405  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacc 244  Q
    |||||||||||||||||||||||| ||||       ||||||| || | |||||||||||||||    
T  30967406 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaatacc 30967469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 36479249 - 36479408
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||||           ||||||||||||||||  |||||||||| ||||| ||||    
T  36479249 aagaaatctcatgttttcataaaagacttttttttgctaaaatttcacta-----------aaaatccatcaaaatccaatttattaaataatccttcga 36479337  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||| |||||||||||||| ||||       ||||||| || | |||| |||||||||| ||||||    
T  36479338 aatttgaataattttgaataccacgagactttttttaagtgatgaaaaatcttaattgaatacctcaagac 36479408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 28371086 - 28371001
Alignment:
Q  118 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaatacca 203  Q
    ||||||||||||||||||||||||||||| || ||||||   |||||||||||||||| |  ||||||||||||||||||||||||    
T  28371086 taaaatttcactagaaaatcccacaaaattcaccaaaattcaatttattaaacaatcctttaaaatttgaatgattttgaatacca 28371001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 49834890 - 49834988
Alignment:
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||    
T  49834890 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaag 49834988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 250
Target Start/End: Original strand, 49501526 - 49501687
Alignment:
Q  81 aagaaatctcatgttttcat--gaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtc 178  Q
    |||||||||||| |||| ||  ||||||||||||| || ||||||| ||||| ||||| ||||||||||||          |||||||||||||||  ||    
T  49501526 aagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------atttattaaacaatcattc 49501615  T
Q  179 gaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    ||||||||||||||||||||| |||| ||||       ||||||| || ||||||||||||||||| |||||    
T  49501616 gaaatttgaatgattttgaatgccacaagacattttttaagtgatgaaaagtcttgattgaatacctcaaga 49501687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 250
Target Start/End: Original strand, 49507591 - 49507752
Alignment:
Q  81 aagaaatctcatgttttcat--gaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtc 178  Q
    |||||||||||| |||| ||  ||||||||||||| || ||||||| ||||| ||||| ||||||||||||          |||||||||||||||  ||    
T  49507591 aagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------atttattaaacaatcattc 49507680  T
Q  179 gaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    ||||||||||||||||||||| |||| ||||       ||||||| || ||||||||||||||||| |||||    
T  49507681 gaaatttgaatgattttgaatgccacaagacattttttaagtgatgaaaagtcttgattgaatacctcaaga 49507752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 209
Target Start/End: Original strand, 41581795 - 41581923
Alignment:
Q  80 taagaaatctcatgttttcatgaaagacttttt-catgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtc 178  Q
    ||||||||||||||||| ||||||| | ||||| |||| |||||||||||||||||||||||||||||  |||  ||||  ||||||||||||||   ||    
T  41581795 taagaaatctcatgtttacatgaaatatttttttcatgttaaaatttcactagaaaatcccacaaaatatatc--aatccaatttattaaacaattattc 41581892  T
Q  179 gaaatttgaatgattttgaataccactagac 209  Q
     |||||||||||| | | |||||||| ||||    
T  41581893 aaaatttgaatgactctaaataccacgagac 41581923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 20021531 - 20021424
Alignment:
Q  83 gaaatctcatgttttcatgaaagactttttcat-gctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaa 181  Q
    ||||||| |||| ||||||||||| |||||  | | |||||||||| || ||||||||| |||||||| |||||||| |||||||||||||||| |  ||    
T  20021531 gaaatcttatgtcttcatgaaagattttttttttgttaaaatttcattaaaaaatcccataaaatccagcaaaatctaatttattaaacaatcctttaaa 20021432  T
Q  182 atttgaat 189  Q
    ||||||||    
T  20021431 atttgaat 20021424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 209
Target Start/End: Complemental strand, 5800164 - 5800049
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    |||||| || ||||||| |||||||||||| || ||||||| | ||| |||||| |||||||||||          |||||||||||||||| | |||||    
T  5800164 aaatcttatcttttcattaaagactttttcttgttaaaattactctacaaaatctcacaaaatcca----------atttattaaacaatcctttgaaat 5800075  T
Q  184 ttgaatgattttgaataccactagac 209  Q
    ||||||||||||||||||||| ||||    
T  5800074 ttgaatgattttgaataccacaagac 5800049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 32684065 - 32684123
Alignment:
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagac 209  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  32684065 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 32684123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 209
Target Start/End: Complemental strand, 50018437 - 50018322
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    ||||||||| ||||| |||||||||||||| || ||||||| |||||          |||||||||| |||||   |||||||||||||||| || ||||    
T  50018437 aaatctcatcttttcttgaaagactttttcttgttaaaattacacta----------caaaatccattaaaattcaatttattaaacaatccttcaaaat 50018348  T
Q  184 ttgaatgattttgaataccactagac 209  Q
    ||||||||| ||||||||||| ||||    
T  50018347 ttgaatgatcttgaataccacaagac 50018322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 32684018 - 32684072
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 138  Q
    ||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||    
T  32684018 aaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 32684072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 36727960 - 36728023
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 148  Q
    ||||||||||| | ||||||||| |||||| || ||||||||||||| ||||||| |||||||||    
T  36727960 aaatctcatgtct-catgaaagattttttcttgttaaaatttcactaaaaaatcctacaaaatcc 36728023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 115
Target Start/End: Original strand, 55047641 - 55047674
Alignment:
Q  82 agaaatctcatgttttcatgaaagactttttcat 115  Q
    |||||| |||||||||||||||||||||||||||    
T  55047641 agaaatatcatgttttcatgaaagactttttcat 55047674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 12193227 - 12193135
Alignment:
Q  82 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 174  Q
    ||||||||  |||||| ||| |||| ||||| ||||| ||| ||||||| | | |||||||||||||| ||||||   | |||||||||||||    
T  12193227 agaaatcttgtgttttaatgtaagatttttttatgctgaaaattcactaaatattcccacaaaatccaccaaaattcaacttattaaacaatc 12193135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 38581 - 38781
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38581 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 38680  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  38681 tcaaaatctga-ttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 38779  T
Q  250 ac 251  Q
    ||    
T  38780 ac 38781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 19451784 - 19452009
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19451784 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 19451883  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||    
T  19451884 tcaaaatctgatttattaaacgatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattaaataccacaag 19451983  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  19451984 actttttttaaatgacaaagaatctt 19452009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 50 - 275
Target Start/End: Complemental strand, 21222371 - 21222146
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21222371 tagtaaaatcttaaaagaaaataacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatcca 21222272  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||       |||||||||||||||||||||||||||||||||    
T  21222271 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacctctagactttttttaagtgattaagagtcttgattgaataccacaag 21222172  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  21222171 actttttttaaatgacaaagaatctt 21222146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 50192526 - 50192728
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50192526 tagtaaaatcttaaaagaaaaaaacaatcctaaaaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 50192625  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaa 248  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  50192626 tcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaa 50192725  T
Q  249 gac 251  Q
    |||    
T  50192726 gac 50192728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 50 - 247
Target Start/End: Original strand, 45759985 - 45760182
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45759985 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatcaaatactttttcatgctaaaatttcactagaaaatcccacaaaatcca 45760084  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccaca 247  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  45760085 tcaaaatctgatttattaaacaatccttcgaagtttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccaca 45760182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 35279872 - 35279671
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35279872 caattctaagaaatctcatgttttcatgaaagactttttcatgttgaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 35279773  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 273  Q
    || ||||||||| |||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||       |||||||||||||||    
T  35279772 ccttcgaaatttaaatgattttgaataccactagactttttttaagtgattaatagtcttgattgaataccacaagactttttttaaatgacaaagaatc 35279673  T
Q  274 tt 275  Q
    ||    
T  35279672 tt 35279671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 49198245 - 49198469
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49198245 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 49198344  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||       ||||||||||||||||| ||||||||||||||     
T  49198345 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactgaactttttttaagtgattaagagtctt-attgaataccacaaa 49198443  T
Q  250 acnnnnnnnaaatgacaaagaatctt 275  Q
    ||       |||||||||||||||||    
T  49198444 actttttttaaatgacaaagaatctt 49198469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 6304252 - 6304454
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6304252 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 6304351  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagag-tcttgattgaataccacaagacnnnnnnnaaatgacaaagaat 272  Q
    || |||||||||||||||||||||||||||||||||       ||||||||||||| | ||| ||||||||||||||||       ||||||||||||||    
T  6304352 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtttttggttgaataccacaagactttttttaaatgacaaagaat 6304451  T
Q  273 ctt 275  Q
    |||    
T  6304452 ctt 6304454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 47654327 - 47654553
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||    
T  47654327 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaatactttttcatgctaaaatttccctagaaaattccacaaaatcca 47654426  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaa 248  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||        |||||||||||||| |||||||||||||||||    
T  47654427 tcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacttttttttaagtgattaagagttttgattgaataccacaa 47654526  T
Q  249 gacnnnnnnnaaatgacaaagaatctt 275  Q
    |||       |||||||||||||||||    
T  47654527 gacttcttttaaatgacaaagaatctt 47654553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 28824349 - 28824549
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  28824349 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttataaaagactttttcatgttaaaatttccctagaaaatcccacaaaatcca 28824448  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 249  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||||||    
T  28824449 tcaaaatctgatttattaaacaat-cttcgaaatttgaatgattttgaataccacaagactgtttttaagtgattaagagtcttgattgaataccacaag 28824547  T
Q  250 ac 251  Q
    ||    
T  28824548 ac 28824549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 45536150 - 45535970
Alignment:
Q  74 caatcctaagaaatctcatgttttc------atgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 167  Q
    |||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45536150 caatcctaagaaatctcatgttttcgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 45536051  T
Q  168 aacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 248  Q
    |||||||  |||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||||    
T  45536050 aacaatctttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaa 45535970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 74 - 250
Target Start/End: Original strand, 35679128 - 35679304
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  35679128 caatcttaagaaatctcatgtcttcatgaaagactttttcatgctaaaatttcactagaaaatcccatcaaatccatcaaaatctgatttattaaacaat 35679227  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    || ||||||||||||||||||||||||||||  |||       ||||||||||||||||||||||||||| ||||||    
T  35679228 ccttcgaaatttgaatgattttgaataccacatgactttttttaagtgattaagagtcttgattgaatactacaaga 35679304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 50 - 247
Target Start/End: Complemental strand, 47780935 - 47780738
Alignment:
Q  50 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  47780935 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaaaactttttcatgttaaaatttcactagaaaatcccacaaaatcca 47780836  T
Q  150 tcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccaca 247  Q
    |||||||||||||||||||||||||| |  || |||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||    
T  47780835 tcaaaatctgatttattaaacaatccttttaattttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccaca 47780738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 79 - 247
Target Start/End: Complemental strand, 49418279 - 49418111
Alignment:
Q  79 ctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtc 178  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |     
T  49418279 ctaagaaatctcatattttcatgaaagattttttcatgctaaaatttcaatagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttt 49418180  T
Q  179 gaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccaca 247  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||||    
T  49418179 gaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccaca 49418111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 84 - 250
Target Start/End: Original strand, 32588963 - 32589129
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||    
T  32588963 aaatctcatgttttcatgaaagacttttttatgctaaaatttcactagaaaatctcacaaaatccatcaaaatccgatttattaaacaatccttcaaaat 32589062  T
Q  184 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    ||||||||||||||||||||| ||||       ||||||| ||||||||||||||||| ||||||||    
T  32589063 ttgaatgattttgaataccacaagacttcttttaagtgatgaagagtcttgattgaatgccacaaga 32589129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 109 - 275
Target Start/End: Complemental strand, 730314 - 730147
Alignment:
Q  109 ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactaga 208  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  730314 ttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaattcgtcgaaatttgaatgattttgaataccactaga 730215  T
Q  209 c-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    |        |||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  730214 cttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatctt 730147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 29556305 - 29556127
Alignment:
Q  74 caatcctaagaaatctcatgt-tttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 172  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  29556305 caatcctaagaaatctcatgtgtttcataaaagactttttcaagctaaaatttcattagaaaatcccataaaatccatcaaaatctaatttattaaacaa 29556206  T
Q  173 tccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||  |||||||||||||||||||||||| |||||||        |||||||||||||||||||||||||| ||||||||    
T  29556205 tctttcgaaatttgaatgattttgaataacactagattttttttaagtgattaagagtcttgattgaataacacaagac 29556127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 51 - 204
Target Start/End: Original strand, 31572174 - 31572327
Alignment:
Q  51 agtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccat 150  Q
    ||||||||||||||||       |||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  31572174 agtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgatttcatgaaagactttttcatcctaaaatttcactataaaatcccacaaaatccat 31572273  T
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccac 204  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  31572274 caaaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccac 31572327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 6312767 - 6312597
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  6312767 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 6312668  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  6312667 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 6312597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 29396395 - 29396565
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  29396395 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29396494  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  29396495 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 29396565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 74 - 209
Target Start/End: Original strand, 9577432 - 9577567
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  9577432 caatcccaagaaatctcatgttttcatgaaagattttttcattctaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaaacaat 9577531  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagac 209  Q
    || || ||||||||||||||||||||| ||| ||||    
T  9577532 ccttctaaatttgaatgattttgaatatcacaagac 9577567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 51701770 - 51701603
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    ||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  51701770 aaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 51701671  T
Q  184 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||    
T  51701670 ttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagac 51701603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 37014640 - 37014817
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||| |||||||    
T  37014640 caatcttaagaaatctcatgtttttatgagagactttttcatgctaaaatttcactagaaaatccgacaaaatccatcaaaattcaatttataaaacaat 37014739  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |  | |||||||||||||||||||||| ||| ||||       ||||||| |||| | ||||||||||||||||||||    
T  37014740 ctttagaaatttgaatgattttgaatatcacaagactttttttaagtgatgaagaatattgattgaataccacaagac 37014817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 48177469 - 48177639
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||  ||||    
T  48177469 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 48177568  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || | | ||||||||||||| ||||||    
T  48177569 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaaattttgattgaatacctcaagac 48177639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 82 - 251
Target Start/End: Complemental strand, 46328234 - 46328065
Alignment:
Q  82 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaa 181  Q
    |||||||| || |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  46328234 agaaatcttatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcgaa 46328135  T
Q  182 atttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  46328134 atttgaatgattttgaataccacgagactttttgtaagtgatgaaaagtcttgattgaatacctcaagac 46328065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 48524490 - 48524346
Alignment:
Q  103 aagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaatacc 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  || ||||||||||||||||||||| |    
T  48524490 aagactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaaactgatttattaaacaatctttcaaaatttgaatgattttgaatatc 48524391  T
Q  203 actagacnnnnnnnaagtgattaagagtcttgattgaataccaca 247  Q
    || ||||       |||||||||||||| |||||| |||||||||    
T  48524390 acaagactttttttaagtgattaagagttttgattaaataccaca 48524346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 25612350 - 25612180
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || |||||||  |||| ||||||||||||||||||||||||||  |||||||||||||||| | ||    
T  25612350 aagaaatctcatcttttcatgaaagactttttcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 25612251  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       || |||| || | ||||||||||||||| ||||||    
T  25612250 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagac 25612180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 74 - 250
Target Start/End: Complemental strand, 33025703 - 33025536
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||          |||||||| |||||||||||    
T  33025703 caatcataagaaatctcatgttttcatgaaagactttttcatgctaaaattttattagaaaatcccacaa----------aatctgatgtattaaacaat 33025614  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagag-tcttgattgaataccacaaga 250  Q
    || || ||||||||||||||||||||||||| ||||       ||||||||||||| | |||||||||||||||||||    
T  33025613 ccttcaaaatttgaatgattttgaataccacaagactttttttaagtgattaagagtttttgattgaataccacaaga 33025536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 275
Target Start/End: Original strand, 28387400 - 28387594
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  28387400 aagaaatctcatctttttatgaaagacttttttttgttaaaattaaactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 28387499  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    ||||||||||| |||||||||||| |||        || |||| || ||||||||||||||||| ||||||       |||||||||||||||||    
T  28387500 aatttgaatgaatttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatctt 28387594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 9322507 - 9322630
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||||   |||||||||||||||| || |    
T  9322507 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcta 9322606  T
Q  181 aatttgaatgattttgaataccac 204  Q
    ||||||||||||||||||||||||    
T  9322607 aatttgaatgattttgaataccac 9322630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 15835060 - 15835183
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||| | |     
T  15835060 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatcctttgc 15835159  T
Q  181 aatttgaatgattttgaataccac 204  Q
    ||||||||||||||||||||||||    
T  15835160 aatttgaatgattttgaataccac 15835183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 244
Target Start/End: Original strand, 38536106 - 38536259
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||| | ||    
T  38536106 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcctttga 38536195  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacc 244  Q
    ||||||||| |||||||||||||| ||||       |||| || || |||||||||||||||||    
T  38536196 aatttgaataattttgaataccacaagacttttgttaagtaatgaaaagtcttgattgaatacc 38536259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 244
Target Start/End: Original strand, 38558324 - 38558477
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||| | ||    
T  38558324 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcctttga 38558413  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacc 244  Q
    ||||||||| |||||||||||||| ||||       |||| || || |||||||||||||||||    
T  38558414 aatttgaataattttgaataccacaagacttttgttaagtaatgaaaagtcttgattgaatacc 38558477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 29219469 - 29219309
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||| ||      
T  29219469 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttctt 29219380  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||    
T  29219379 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagac 29219309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 955882 - 955823
Alignment:
Q  142 aaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaatac 201  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  955882 aaaatccatcaaaatctgatttattaaacaacccttcgaaatttgaatgattttgaatac 955823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 204
Target Start/End: Original strand, 48668785 - 48668905
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||| || ||||||||| |||||||||||||||||||| || ||||||| ||||| | ||||||||||||||||          ||||||||||||||    
T  48668785 caatcccaacaaatctcatcttttcatgaaagactttttcttgttaaaattacactacagaatcccacaaaatcca----------atttattaaacaat 48668874  T
Q  174 ccgtcgaaatttgaatgattttgaataccac 204  Q
    |  ||||||||||||| ||||||||||||||    
T  48668875 ctttcgaaatttgaataattttgaataccac 48668905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 251
Target Start/End: Original strand, 5495117 - 5495273
Alignment:
Q  85 aatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatt 184  Q
    |||||||| ||||||| || ||||||||| || ||||||| ||||| ||||||||||||||||||          |||||||||| ||||| | ||||||    
T  5495117 aatctcatcttttcataaaggactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaataatcctttgaaatt 5495206  T
Q  185 tgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    | |||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  5495207 taaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 5495273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 18798614 - 18798514
Alignment:
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 250  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||    
T  18798614 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaga 18798515  T
Q  251 c 251  Q
    |    
T  18798514 c 18798514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 209
Target Start/End: Complemental strand, 51085951 - 51085860
Alignment:
Q  118 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagac 209  Q
    ||||||||||| ||||||| ||||||||| ||||||||||  ||||||| || ||||| || |||||||||| |||||||||||||| ||||    
T  51085951 taaaatttcacaagaaaattccacaaaattcatcaaaatccaatttatttaataatccttcaaaatttgaattattttgaataccacgagac 51085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 49231000 - 49230909
Alignment:
Q  160 atttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |||||||||| ||||| |||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  49231000 atttattaaataatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 49230909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 22183457 - 22183369
Alignment:
Q  187 aatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    |||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||       |||||||||||||||||    
T  22183457 aatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaagactttttttaaatgacaaagaatctt 22183369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 251
Target Start/End: Complemental strand, 47784542 - 47784410
Alignment:
Q  108 tttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactag 207  Q
    |||||||||||||||||| ||||||||||| |||||||||||          |||||||||||||||  | ||| ||||||| |||||||||||||| ||    
T  47784542 tttttcatgctaaaatttaactagaaaatctcacaaaatcca----------atttattaaacaatctttagaagtttgaataattttgaataccacaag 47784453  T
Q  208 acnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||       || |||  |||||||||||||||||||||||||||    
T  47784452 acttttttaaa-tgacaaagagtcttgattgaataccacaagac 47784410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 38320098 - 38320006
Alignment:
Q  82 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccc-acaaaatccatcaaaatctgatttattaaacaatc 174  Q
    |||||| |||| |||||||||||||||||||  |||||||| ||||||| |||| ||| |||||||| |||||||||  ||||| |||||||||    
T  38320098 agaaatatcatattttcatgaaagacttttttgtgctaaaa-ttcactaaaaaaacccaacaaaatctatcaaaatcctatttagtaaacaatc 38320006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 45272765 - 45272609
Alignment:
Q  84 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaat 183  Q
    ||||||||| |||| || ||||| |||||| || ||||||| ||||| |||||| |||||||||||          ||||||||||| |||| |||||||    
T  45272765 aaatctcatctttttataaaagattttttcttgttaaaattacactacaaaatctcacaaaatcca----------atttattaaac-atccttcgaaat 45272677  T
Q  184 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || ||| |||||||||||||| |||        ||||||| || ||||||||||||||||| ||||||    
T  45272676 ttaaataattttgaataccacgagattttttttaagtgatgaaaagtcttgattgaatacctcaagac 45272609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 48524865 - 48524805
Alignment:
Q  51 agtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttt 111  Q
    ||||||||||||||||       ||||||||| ||||||||||||||||||||||||||||    
T  48524865 agtaaaatcttaaaagaaaaaaccaatcctaacaaatctcatgttttcatgaaagactttt 48524805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 31622536 - 31622586
Alignment:
Q  151 caaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaatac 201  Q
    ||||||| ||||||||||||||||  | |||||||||||||||||||||||    
T  31622536 caaaatccgatttattaaacaatcttttgaaatttgaatgattttgaatac 31622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 953876 - 953818
Alignment:
Q  217 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    |||||||||||||||||||| ||||||||||||||       |||||||||||||||||    
T  953876 aagtgattaagagtcttgatcgaataccacaagactttttttaaatgacaaagaatctt 953818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 18798663 - 18798615
Alignment:
Q  82 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcacta 130  Q
    ||||||||||| |||||||||||||||||||| || ||||||| |||||    
T  18798663 agaaatctcatcttttcatgaaagactttttcttgttaaaattacacta 18798615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 138
Target Start/End: Complemental strand, 955904 - 955876
Alignment:
Q  110 tttcatgctaaaatttcactagaaaatcc 138  Q
    |||||||||||||||||||||||||||||    
T  955904 tttcatgctaaaatttcactagaaaatcc 955876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 102302 - 102125
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  102302 caatcataagaaatctcatatttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 102203  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    |  |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  102202 ctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 102125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 38895 - 39072
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 173  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38895 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 38994  T
Q  174 ccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    || || ||||||||||||||||||||| ||||||||       ||||||||||||||||| |||||||||||||||||    
T  38995 ccttccaaatttgaatgattttgaatatcactagacttcttttaagtgattaagagtctttattgaataccacaagac 39072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 77 - 275
Target Start/End: Complemental strand, 100415 - 100217
Alignment:
Q  77 tcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccg 176  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||     
T  100415 tcctaagaaatctcatgttttcatgaaagactttttcttgttaaaatttcactagaaaaacccacaaaatccatcaaaatttgatttattaaacaatcct 100316  T
Q  177 tcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatctt 275  Q
    | |||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||       |||||||||||||||||    
T  100315 ttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgagtaccacaagactttttttaaatgacaaagaatctt 100217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 75 - 275
Target Start/End: Original strand, 540 - 740
Alignment:
Q  75 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 174  Q
    |||||||||||||||||||||||| | |||||||||||||| | |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  540 aatcctaagaaatctcatgttttcgtcaaagactttttcataccaaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaatc 639  T
Q  175 cgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatct 274  Q
    | || ||||||||||||||||||||||||||| |        |||||||||||||| ||||||||||||||||| ||       ||||||||||||||||    
T  640 cttccaaatttgaatgattttgaataccactaaaaaaaatttaagtgattaagagttttgattgaataccacaatactttttttaaatgacaaagaatct 739  T
Q  275 t 275  Q
    |    
T  740 t 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 36914 - 37084
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||||||| || |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||| | ||||    
T  36914 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatgcttcga 37013  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 251  Q
    ||||| |||||||||||||||| | ||||       || |||  |||||||||||||||||| ||||||||    
T  37014 aattttaatgattttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatagcacaagac 37084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 10760 - 10637
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||||   |||||||||||||||| | ||    
T  10760 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatcctttga 10661  T
Q  181 aatttgaatgattttgaataccac 204  Q
    ||||||||||||||||||||||||    
T  10660 aatttgaatgattttgaataccac 10637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 39624 - 39747
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    ||||||||| || |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||| ||||| ||||    
T  39624 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaataatccttcga 39723  T
Q  181 aatttgaatgattttgaataccac 204  Q
    | ||||||||||||||||||||||    
T  39724 agtttgaatgattttgaataccac 39747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 1063 - 936
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||| |||||||||||||||  | ||||||| ||||| ||||||||||||||||||||||||||| |||||||||| ||| | ||||    
T  1063 aagaaatctcatattttaatgaaagactttttctagttaaaattacactacaaaatcccacaaaatccatcaaaatct-atttattaaataattcttcga 965  T
Q  181 aatttgaatgattttgaataccactagac 209  Q
    |||||||||||||||||||||||| ||||    
T  964 aatttgaatgattttgaataccacaagac 936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 58083 - 58206
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| ||||||||||||| ||| || || |||||||  |||| ||||||||||||||||||||||||||  |||||||||||||||  ||||    
T  58083 aagaaatctcatcttttcatgaaagattttctcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 58182  T
Q  181 aatttgaatgattttgaataccac 204  Q
    ||||||||||||||||||||||||    
T  58183 aatttgaatgattttgaataccac 58206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 14967 - 14892
Alignment:
Q  74 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 149  Q
    ||||| ||||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||    
T  14967 caatcttaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca 14892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 244
Target Start/End: Complemental strand, 14072 - 13919
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcga 180  Q
    |||||||||||| |||||||||||||||||||| |  ||||||  ||||          ||||||||||||||||||  |||||||||||||||  | ||    
T  14072 aagaaatctcatcttttcatgaaagactttttcttattaaaatcccact----------acaaaatccatcaaaatccaatttattaaacaatcttttga 13983  T
Q  181 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacc 244  Q
    |||||||||||||||||||||||| ||||       ||||||| || |||||||||||||||||    
T  13982 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacc 13919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 52; Significance: 7e-21; HSPs: 3)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 21304 - 21408
Alignment:
Q  140 acaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 239  Q
    ||||||||||||||||||  |||||||||||||||  | |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  21304 acaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 21403  T
Q  240 atacc 244  Q
    |||||    
T  21404 atacc 21408  T

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Target: scaffold0152; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 21255 - 21287
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttc 113  Q
    |||||||||||| ||||||||||||||||||||    
T  21255 aagaaatctcatcttttcatgaaagactttttc 21287  T

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Target: scaffold0152; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 28542 - 28510
Alignment:
Q  81 aagaaatctcatgttttcatgaaagactttttc 113  Q
    |||||||||||| ||||||||||||||||||||    
T  28542 aagaaatctcatcttttcatgaaagactttttc 28510  T

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Target: scaffold0922 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 4337 - 4230
Alignment:
Q  144 aatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatac 243  Q
    ||||||||||||||  |||||||||||||||| || ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||    
T  4337 aatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatac 4238  T
Q  244 cacaagac 251  Q
    | ||||||    
T  4237 ctcaagac 4230  T

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Target: scaffold0839 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 3712 - 3792
Alignment:
Q  94 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 174  Q
    |||| ||||||||| ||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  3712 tttttatgaaagaccttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatc 3792  T

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Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 201
Target Start/End: Complemental strand, 199998 - 199905
Alignment:
Q  108 tttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccgtcgaaatttgaatgattttgaatac 201  Q
    ||||| || ||||| |||||||| |||||| ||||||||| ||||||||   |||||||||||| ||  || |||||||||||||||| |||||    
T  199998 ttttttatactaaagtttcactaaaaaatctcacaaaatcaatcaaaattcaatttattaaacactctttcaaaatttgaatgattttaaatac 199905  T

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