View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13395_high_5 (Length: 605)

Name: NF13395_high_5
Description: NF13395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13395_high_5
NF13395_high_5
[»] chr7 (46 HSPs)
chr7 (262-589)||(10377629-10377954)
chr7 (1-93)||(10377341-10377433)
chr7 (124-261)||(10377464-10377594)
chr7 (174-220)||(8239056-8239102)
chr7 (173-222)||(27732243-27732292)
chr7 (168-220)||(12278836-12278888)
chr7 (175-219)||(22868050-22868094)
chr7 (159-222)||(22602714-22602777)
chr7 (144-222)||(1433431-1433509)
chr7 (144-222)||(2425737-2425815)
chr7 (144-222)||(19206027-19206105)
chr7 (175-221)||(21140987-21141033)
chr7 (185-222)||(3520346-3520383)
chr7 (165-222)||(20549789-20549846)
chr7 (144-221)||(26329387-26329464)
chr7 (165-222)||(27093417-27093474)
chr7 (165-222)||(27184827-27184884)
chr7 (165-218)||(33384590-33384643)
chr7 (175-219)||(17851439-17851483)
chr7 (159-219)||(32308112-32308172)
chr7 (164-219)||(5548673-5548728)
chr7 (167-222)||(16341496-16341551)
chr7 (175-222)||(23128665-23128712)
chr7 (175-222)||(23849462-23849509)
chr7 (188-222)||(640134-640168)
chr7 (144-214)||(5235963-5236033)
chr7 (144-218)||(5956250-5956324)
chr7 (144-222)||(15902799-15902877)
chr7 (145-219)||(18013081-18013155)
chr7 (144-222)||(26733281-26733359)
chr7 (144-222)||(27945018-27945096)
chr7 (153-222)||(2948669-2948738)
chr7 (185-222)||(5835265-5835302)
chr7 (185-222)||(9482952-9482989)
chr7 (187-220)||(10478729-10478762)
chr7 (182-219)||(11744195-11744232)
chr7 (185-222)||(18213037-18213074)
chr7 (165-222)||(24146814-24146871)
chr7 (185-222)||(39138462-39138499)
chr7 (147-220)||(43249973-43250046)
chr7 (144-220)||(4017800-4017876)
chr7 (170-222)||(7328695-7328747)
chr7 (144-220)||(13770668-13770744)
chr7 (146-222)||(22484004-22484080)
chr7 (164-212)||(29787383-29787431)
chr7 (166-222)||(32287467-32287523)
[»] chr8 (28 HSPs)
chr8 (144-221)||(27213524-27213601)
chr8 (159-222)||(4786342-4786405)
chr8 (167-218)||(11803259-11803310)
chr8 (147-222)||(31236581-31236656)
chr8 (164-222)||(11927090-11927148)
chr8 (144-222)||(11944642-11944720)
chr8 (166-222)||(12606833-12606889)
chr8 (159-222)||(13844600-13844663)
chr8 (144-222)||(28384998-28385076)
chr8 (150-220)||(34897068-34897138)
chr8 (145-219)||(24362209-24362283)
chr8 (166-220)||(31580133-31580187)
chr8 (167-220)||(12570514-12570567)
chr8 (185-222)||(26902179-26902216)
chr8 (175-222)||(14134707-14134754)
chr8 (167-218)||(14731712-14731763)
chr8 (175-222)||(33382023-33382070)
chr8 (171-222)||(33405388-33405439)
chr8 (175-222)||(34222955-34223002)
chr8 (159-222)||(39954283-39954346)
chr8 (188-222)||(8847277-8847311)
chr8 (165-222)||(4611532-4611589)
chr8 (185-222)||(18964195-18964232)
chr8 (175-219)||(3025559-3025603)
chr8 (166-214)||(14634153-14634201)
chr8 (156-220)||(18407708-18407772)
chr8 (144-216)||(29776013-29776085)
chr8 (156-208)||(41831958-41832010)
[»] chr6 (48 HSPs)
chr6 (144-222)||(9658856-9658934)
chr6 (159-222)||(7996382-7996445)
chr6 (159-222)||(8022356-8022419)
chr6 (167-222)||(9025498-9025553)
chr6 (159-222)||(13364709-13364772)
chr6 (144-222)||(5732514-5732592)
chr6 (144-222)||(9027155-9027233)
chr6 (144-222)||(9629360-9629438)
chr6 (164-222)||(21924939-21924997)
chr6 (142-219)||(17341671-17341748)
chr6 (154-219)||(19040339-19040404)
chr6 (159-220)||(26562681-26562742)
chr6 (175-222)||(7265597-7265644)
chr6 (167-222)||(19147842-19147897)
chr6 (144-222)||(3398596-3398673)
chr6 (144-222)||(7086772-7086850)
chr6 (144-222)||(7938093-7938171)
chr6 (175-213)||(8389485-8389523)
chr6 (177-218)||(17411876-17411917)
chr6 (159-215)||(677829-677885)
chr6 (144-220)||(13851713-13851789)
chr6 (172-220)||(21142123-21142171)
chr6 (187-222)||(7027262-7027297)
chr6 (167-222)||(7723254-7723309)
chr6 (175-222)||(9617442-9617489)
chr6 (185-220)||(11591876-11591911)
chr6 (164-222)||(30851599-30851655)
chr6 (175-218)||(32511674-32511717)
chr6 (159-222)||(33001293-33001356)
chr6 (144-222)||(426518-426596)
chr6 (156-222)||(7377968-7378034)
chr6 (144-222)||(7977834-7977912)
chr6 (144-222)||(10294084-10294162)
chr6 (144-222)||(16766674-16766752)
chr6 (175-221)||(30866149-30866195)
chr6 (144-222)||(34073351-34073429)
chr6 (147-220)||(2153893-2153966)
chr6 (185-222)||(13360376-13360413)
chr6 (145-222)||(19044442-19044519)
chr6 (175-220)||(24832596-24832641)
chr6 (175-211)||(2224234-2224270)
chr6 (144-220)||(6389720-6389796)
chr6 (187-219)||(8101105-8101137)
chr6 (166-222)||(9195758-9195814)
chr6 (165-213)||(12686408-12686455)
chr6 (175-219)||(17302355-17302399)
chr6 (147-211)||(23771559-23771622)
chr6 (168-212)||(31579239-31579283)
[»] chr2 (32 HSPs)
chr2 (159-222)||(39279667-39279730)
chr2 (147-217)||(16069263-16069333)
chr2 (144-218)||(21616739-21616813)
chr2 (168-222)||(30527599-30527653)
chr2 (159-219)||(35449505-35449565)
chr2 (147-222)||(23718006-23718081)
chr2 (147-222)||(24105678-24105753)
chr2 (187-222)||(34691809-34691844)
chr2 (187-222)||(34714221-34714256)
chr2 (147-221)||(30404855-30404929)
chr2 (165-219)||(31808075-31808129)
chr2 (145-222)||(18421941-18422018)
chr2 (185-222)||(20242731-20242768)
chr2 (159-212)||(21782832-21782885)
chr2 (185-222)||(35056886-35056923)
chr2 (159-220)||(37411250-37411311)
chr2 (175-222)||(5367200-5367247)
chr2 (145-221)||(10547933-10548011)
chr2 (175-222)||(44860328-44860375)
chr2 (174-220)||(1239666-1239712)
chr2 (164-222)||(18276518-18276576)
chr2 (159-213)||(19573970-19574024)
chr2 (144-222)||(20539678-20539756)
chr2 (168-210)||(22084848-22084890)
chr2 (185-222)||(18889595-18889632)
chr2 (185-222)||(34784986-34785023)
chr2 (185-222)||(38355891-38355928)
chr2 (147-222)||(14996227-14996303)
chr2 (175-219)||(17776595-17776639)
chr2 (166-222)||(24975329-24975385)
chr2 (188-220)||(28524447-28524479)
chr2 (164-216)||(28677906-28677958)
[»] chr1 (46 HSPs)
chr1 (147-222)||(52903229-52903304)
chr1 (165-222)||(1864884-1864941)
chr1 (159-222)||(13997875-13997938)
chr1 (164-218)||(13436455-13436509)
chr1 (144-222)||(39130771-39130849)
chr1 (145-222)||(1486713-1486790)
chr1 (165-222)||(38503318-38503375)
chr1 (149-217)||(12443469-12443537)
chr1 (144-219)||(398772-398847)
chr1 (147-214)||(15641042-15641109)
chr1 (159-222)||(36878453-36878516)
chr1 (167-222)||(40181871-40181926)
chr1 (144-222)||(5376504-5376582)
chr1 (144-222)||(9709797-9709875)
chr1 (156-222)||(21530678-21530744)
chr1 (165-222)||(2784554-2784611)
chr1 (185-222)||(30749858-30749895)
chr1 (185-222)||(30771309-30771346)
chr1 (166-223)||(34257913-34257970)
chr1 (185-222)||(34371731-34371768)
chr1 (185-222)||(44482248-44482285)
chr1 (175-219)||(7918218-7918262)
chr1 (166-222)||(20157354-20157410)
chr1 (166-217)||(19324561-19324612)
chr1 (159-218)||(19562629-19562688)
chr1 (159-218)||(25098563-25098622)
chr1 (175-218)||(35999330-35999373)
chr1 (147-222)||(46348387-46348462)
chr1 (187-222)||(48148041-48148076)
chr1 (148-222)||(2896125-2896199)
chr1 (164-222)||(5898270-5898328)
chr1 (144-218)||(6427327-6427401)
chr1 (185-219)||(10233271-10233305)
chr1 (168-218)||(16252894-16252944)
chr1 (186-220)||(17705592-17705626)
chr1 (185-219)||(25361904-25361938)
chr1 (156-222)||(29163385-29163451)
chr1 (164-222)||(39953150-39953208)
chr1 (144-221)||(10577740-10577817)
chr1 (175-216)||(12707883-12707924)
chr1 (175-216)||(12713337-12713378)
chr1 (175-216)||(12717428-12717469)
chr1 (159-220)||(17831537-17831598)
chr1 (144-213)||(34298413-34298482)
chr1 (166-222)||(9629904-9629960)
chr1 (166-222)||(38075974-38076030)
[»] chr4 (26 HSPs)
chr4 (150-220)||(1213227-1213296)
chr4 (166-222)||(26504303-26504359)
chr4 (164-220)||(13134447-13134503)
chr4 (159-214)||(21539879-21539934)
chr4 (166-217)||(22440609-22440660)
chr4 (159-221)||(40613442-40613504)
chr4 (156-222)||(46160885-46160951)
chr4 (167-212)||(56257933-56257978)
chr4 (174-222)||(5775362-5775410)
chr4 (164-220)||(11931277-11931333)
chr4 (144-220)||(24343484-24343560)
chr4 (152-216)||(35952627-35952691)
chr4 (164-220)||(40742588-40742644)
chr4 (173-216)||(903928-903971)
chr4 (185-216)||(7970537-7970568)
chr4 (185-216)||(8402752-8402783)
chr4 (164-219)||(14126118-14126173)
chr4 (175-218)||(36635332-36635375)
chr4 (149-222)||(16189690-16189764)
chr4 (144-211)||(49041876-49041945)
chr4 (175-220)||(999354-999399)
chr4 (165-222)||(8423722-8423779)
chr4 (165-222)||(9996838-9996895)
chr4 (175-216)||(49652982-49653023)
chr4 (175-219)||(3712516-3712560)
chr4 (165-213)||(35161034-35161082)
[»] chr3 (34 HSPs)
chr3 (144-222)||(8383234-8383312)
chr3 (164-222)||(25093499-25093557)
chr3 (165-222)||(7614419-7614476)
chr3 (144-213)||(14840304-14840373)
chr3 (143-219)||(32804547-32804623)
chr3 (175-222)||(8039839-8039886)
chr3 (159-218)||(10455782-10455841)
chr3 (144-211)||(15796309-15796376)
chr3 (159-220)||(1830335-1830396)
chr3 (165-222)||(4466604-4466661)
chr3 (165-222)||(7928448-7928505)
chr3 (165-218)||(11313808-11313861)
chr3 (165-218)||(16192758-16192811)
chr3 (173-218)||(16789018-16789063)
chr3 (187-220)||(29508464-29508497)
chr3 (144-220)||(24205047-24205123)
chr3 (175-222)||(10690266-10690313)
chr3 (187-222)||(17005623-17005658)
chr3 (187-222)||(40993339-40993374)
chr3 (150-200)||(5339091-5339141)
chr3 (156-222)||(8789554-8789620)
chr3 (144-222)||(28917978-28918056)
chr3 (185-222)||(13414487-13414524)
chr3 (173-214)||(21419467-21419508)
chr3 (175-220)||(25892468-25892513)
chr3 (185-214)||(29112292-29112321)
chr3 (168-213)||(30994895-30994940)
chr3 (185-222)||(35222956-35222993)
chr3 (174-218)||(2731819-2731863)
chr3 (167-215)||(9624641-9624689)
chr3 (175-215)||(11493372-11493412)
chr3 (186-222)||(11507479-11507515)
chr3 (170-222)||(20691322-20691374)
chr3 (175-219)||(49505161-49505205)
[»] scaffold0110 (1 HSPs)
scaffold0110 (164-222)||(28847-28905)
[»] chr5 (28 HSPs)
chr5 (144-218)||(15410456-15410530)
chr5 (147-220)||(34879330-34879403)
chr5 (159-222)||(3966495-3966558)
chr5 (147-222)||(16203799-16203874)
chr5 (159-222)||(28588678-28588741)
chr5 (165-212)||(34276870-34276917)
chr5 (144-222)||(21191060-21191138)
chr5 (185-222)||(39758290-39758327)
chr5 (167-220)||(41091263-41091316)
chr5 (144-213)||(25888306-25888377)
chr5 (166-218)||(39205879-39205931)
chr5 (175-218)||(6471897-6471940)
chr5 (175-222)||(17925176-17925223)
chr5 (175-222)||(23012412-23012459)
chr5 (175-222)||(30502392-30502439)
chr5 (175-222)||(30542735-30542782)
chr5 (167-221)||(18421846-18421900)
chr5 (144-222)||(22423816-22423894)
chr5 (167-217)||(24273039-24273089)
chr5 (167-217)||(24389125-24389175)
chr5 (164-222)||(16734863-16734923)
chr5 (175-220)||(25863212-25863257)
chr5 (188-217)||(33035810-33035839)
chr5 (175-219)||(12927662-12927706)
chr5 (167-219)||(25817495-25817547)
chr5 (159-219)||(27144455-27144515)
chr5 (185-221)||(31682051-31682087)
chr5 (175-219)||(32630742-32630786)
[»] scaffold0020 (1 HSPs)
scaffold0020 (165-222)||(135316-135373)
[»] scaffold0697 (1 HSPs)
scaffold0697 (156-222)||(1633-1699)
[»] scaffold0168 (1 HSPs)
scaffold0168 (144-222)||(21020-21098)
[»] scaffold0022 (1 HSPs)
scaffold0022 (174-220)||(90850-90896)
[»] scaffold0123 (1 HSPs)
scaffold0123 (185-222)||(44529-44566)
[»] scaffold0136 (1 HSPs)
scaffold0136 (164-211)||(3864-3911)
[»] scaffold0036 (1 HSPs)
scaffold0036 (175-222)||(9751-9798)
[»] scaffold0027 (1 HSPs)
scaffold0027 (144-211)||(46659-46726)
[»] scaffold0171 (1 HSPs)
scaffold0171 (144-222)||(23397-23475)
[»] scaffold0116 (1 HSPs)
scaffold0116 (144-222)||(9875-9953)
[»] scaffold0053 (1 HSPs)
scaffold0053 (144-222)||(8775-8853)
[»] scaffold0050 (1 HSPs)
scaffold0050 (156-222)||(70267-70333)
[»] scaffold0044 (1 HSPs)
scaffold0044 (176-222)||(53189-53235)
[»] scaffold0021 (1 HSPs)
scaffold0021 (144-222)||(130459-130537)
[»] scaffold0008 (1 HSPs)
scaffold0008 (145-219)||(263379-263453)
[»] scaffold0103 (1 HSPs)
scaffold0103 (147-211)||(51791-51855)
[»] scaffold0039 (1 HSPs)
scaffold0039 (178-222)||(84977-85021)
[»] scaffold0007 (1 HSPs)
scaffold0007 (144-220)||(225274-225350)


Alignment Details
Target: chr7 (Bit Score: 301; Significance: 1e-169; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 262 - 589
Target Start/End: Original strand, 10377629 - 10377954
Alignment:
Q  262 ccgggtatctctggttgcaactgcgtacactaatagtccctcaagccagatatgactgtaatgagtgacaaaactctaactcgagagatttaacactgat 361  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10377629 ccgggtatctctggttgcaactgcatacactaatagtccctcaagccagatatgactgtaatgagtgacaaaactctaactcgagagatttaacactgat 10377728  T
Q  362 gcattctcggaactaaatttgaacttaagacccttggttaaactgaaagagattctttaccatctcattcgagtattcttgggttagtattaggttaatt 461  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10377729 gcattctcggaactaaatttgaacttaagacccttggttaaaccgaaagagattctttaccatctcattcgagtattcttgggttagtattaggttaatt 10377828  T
Q  462 gacaccacaaattaaatagtgaatattgaatattcacaatctttattgagtggattctagattggctaactcattaacctttgattgaatttcaatacca 561  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10377829 gacaccacaaattaaatagtgaatattgaatattcacaatctttattgagtggattctagattggataactcattaacctttgattgaatttcaatacca 10377928  T
Q  562 tgaatttgatagttattatacactattt 589  Q
    ||||||||  ||| ||||||||||||||    
T  10377929 tgaatttg--agtgattatacactattt 10377954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10377341 - 10377433
Alignment:
Q  1 aatccacaggatgagaagaaaagaagagttcgtgatgctgctaagcgtaatcgtaggaacaagtttgctaggtatgttattacgggaatttca 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10377341 aatccacaggatgagaagaaaagaagagttcgtgatgctgctaagcgtaatcgtaggaacaagtttgctaggtatgttattacgggaatttca 10377433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 124 - 261
Target Start/End: Original strand, 10377464 - 10377594
Alignment:
Q  124 acctgtttggataatttgtgcacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggtt 223  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||    
T  10377464 acctgtttggataatttgtgcacgacacggatactggcaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatggatccgtt 10377563  T
Q  224 gttctatcagtgtccgggacacgtctattcgaagagtg 261  Q
    |||||||||       ||||||||||||||||||||||    
T  10377564 gttctatca-------ggacacgtctattcgaagagtg 10377594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 8239102 - 8239056
Alignment:
Q  174 ttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||    
T  8239102 ttaataatttaagaaaatcttataattcagtgtaattatatgtgtcg 8239056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 27732292 - 27732243
Alignment:
Q  173 gttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  27732292 gttaataatttaagaaaattacataattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 12278836 - 12278888
Alignment:
Q  168 acactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||||| ||||||| ||||||||| | ||||||||||||||||||||||||||    
T  12278836 acactgataataatttaagaaaatgacataattcagtgtaattatatgtgtcg 12278888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 22868050 - 22868094
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||    
T  22868050 taataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 22602777 - 22602714
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| |||||||| || ||| || | ||||||||| ||||||||||||||||||||||||||||    
T  22602777 gacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggt 22602714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 1433431 - 1433509
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| |  |||| |||||||| ||||||||| | ||||||||| || |||  ||||||||||||||||||||    
T  1433431 cacgacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggt 1433509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 2425815 - 2425737
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| ||||| |||| |||| ||| ||||||||| | ||||||||| |||||| |||| || |||||||||||||    
T  2425815 cacgacacagatactgacacgccggcaccgttaataatttgagaaaatcacataattaagtggaactatatgtgtcggt 2425737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 19206027 - 19206105
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| ||  ||| |||||||| | ||||||| | ||||||||| |||||||| | |||||||||||||||||    
T  19206027 cacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggt 19206105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 21141033 - 21140987
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcgg 221  Q
    ||||||| |||||||||||||||||||||||| |||||| |||||||    
T  21141033 taataatttaagaaaatcatataattcagtgtgattataggtgtcgg 21140987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 3520383 - 3520346
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||||||||||||| |||||||||||||||||||    
T  3520383 agaaaatcatataattcaatgtaattatatgtgtcggt 3520346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 20549789 - 20549846
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||| | |||||||||  |||||||||||||||||||||||||||    
T  20549789 ccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggt 20549846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 26329464 - 26329387
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcgg 221  Q
    |||||||| || || |||| |||||||  ||||||||| | |||||| || | |||||||||||||||||||||||||    
T  26329464 cacgacacagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcgg 26329387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 27093474 - 27093417
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||| ||||||||||| |||||| |||||||||||||| ||||||    
T  27093474 ccgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggt 27093417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 27184827 - 27184884
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||| ||||||||||| |||||| |||||||||||||| ||||||    
T  27184827 ccgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggt 27184884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 33384643 - 33384590
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||| ||||||||| | |||||||| ||||||| |||||||||||||||||    
T  33384643 ccgacaccgttaataatctgagaaaatcctataatttagtgtaattatatgtgt 33384590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 17851439 - 17851483
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||    
T  17851439 taataattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 32308112 - 32308172
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    |||| |||||||| | ||||||| | ||||||||| |||||||||||||||| ||||||||    
T  32308112 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtc 32308172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 5548673 - 5548728
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    |||||||| | | ||||| | ||||||||| |||||||||||||||||||||||||    
T  5548673 gccgacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtc 5548728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 16341496 - 16341551
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||||||| | ||||||||| |||||| |||||||||||||||| ||||    
T  16341496 gacactgataataatttgagaaaatcacataattaagtgtaattatatgtgccggt 16341551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 23128712 - 23128665
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | |||||| |||||||||||||||||| ||||||||||||    
T  23128712 taataatttgagaaaaccatataattcagtgtaatcatatgtgtcggt 23128665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 23849509 - 23849462
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| |||||||| || |||||||||| |||||||||||||||||    
T  23849509 taataatttaagaaaaacacataattcagtataattatatgtgtcggt 23849462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 640134 - 640168
Alignment:
Q  188 aaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||| ||||||||||||||||||||||||||||    
T  640134 aaatcacataattcagtgtaattatatgtgtcggt 640168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 5235963 - 5236033
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatat 214  Q
    |||||||| || || |||| | |||||| | ||||||| ||||||||| |||||||| |||||||||||||    
T  5235963 cacgacacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 5956250 - 5956324
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||| |||||| |||| ||||| |||  ||||||| ||| ||||||| |||||| | |||||||||||||||    
T  5956250 cacgacatggatactgacacgccgatactcctaataatttaaaaaaatcaaataatttaatgtaattatatgtgt 5956324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 15902799 - 15902877
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| || || |||| ||||||||   ||||||| | | ||||||| |||||| |||||||||||||||||||||    
T  15902799 cacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggt 15902877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 18013155 - 18013081
Alignment:
Q  145 acgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    |||||||||| || ||||  | ||||||  ||||||| ||| ||||| | |||||||||||||||||||||||||    
T  18013155 acgacacggacactgacattctgacactactaataatttaaaaaaattacataattcagtgtaattatatgtgtc 18013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 26733281 - 26733359
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| | |||||| | ||||||| | | ||||||| |||||||||| |||||| ||||||||||    
T  26733281 cacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggt 26733359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 27945018 - 27945096
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| ||||||||   ||||||| | ||||||| | ||||||||||||||||| | ||||||||    
T  27945018 cacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggt 27945096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 2948669 - 2948738
Alignment:
Q  153 gatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||| |||| |||||||| | | ||||| | |||||||||  ||||| |||||||||||||||||||||    
T  2948669 gatactgacacgccgacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtgtcggt 2948738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 5835265 - 5835302
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  5835265 agaaaataacataattcagtgtaattatatgtgtcggt 5835302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 9482952 - 9482989
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  9482952 agaaaatcacacaattcagtgtaattatatgtgtcggt 9482989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 220
Target Start/End: Complemental strand, 10478762 - 10478729
Alignment:
Q  187 aaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||| ||||||||||||||||||||||||||||    
T  10478762 aaaattatataattcagtgtaattatatgtgtcg 10478729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 11744232 - 11744195
Alignment:
Q  182 ataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  11744232 ataagaaaattgtataattcagtgtaattatatgtgtc 11744195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 18213074 - 18213037
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  18213074 agaaaatcacataatttagtgtaattatatgtgtcggt 18213037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 24146814 - 24146871
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||| || ||||||| | ||||||||| |||||||| | |||||||||||||||||    
T  24146814 ccgacaatgctaataattttagaaaatcacataattcaatataattatatgtgtcggt 24146871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 39138462 - 39138499
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  39138462 agaaaatcacataattcagtgtaattatatatgtcggt 39138499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 43249973 - 43250046
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||||||| || |||| |||||||| | ||||||| | ||||||| | ||||| ||||||||||||| ||||||    
T  43249973 gacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 43250046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 4017876 - 4017800
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||||||| || |||| |||||||| | ||||||| | ||||||  |||||||| |||||||| ||| ||||||    
T  4017876 cacgacacggacaccgacacgccgacacggataataatttgagaaaacgatataatttagtgtaatcataagtgtcg 4017800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 7328747 - 7328695
Alignment:
Q  170 actgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| ||||||| | ||||||| | |||||| |||||||||||||||||||||    
T  7328747 actgctaataatttgagaaaataacataatttagtgtaattatatgtgtcggt 7328695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 13770668 - 13770744
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||||||| || || | |||||||| | ||||||| ||| ||||| | ||||||||||||||||| | ||||||    
T  13770668 cacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcg 13770744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 22484004 - 22484080
Alignment:
Q  146 cgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||| || || |||| |||||||| | ||||||| | |||||||   |||||||||| |||||||||||||||||    
T  22484004 cgacacagacactgacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggt 22484080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 29787431 - 29787383
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattat 212  Q
    |||||||| | ||||||| | ||||||||| ||||||||||||||||||    
T  29787431 gccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 32287523 - 32287467
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||| | ||||||| | ||||||||| ||||||||||| || |||||||||||||    
T  32287523 cgacaccgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcggt 32287467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 27213524 - 27213601
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcgg 221  Q
    ||||||||||||||||||| |||||||||| ||||||| | ||||||||| |||||||| ||||||||||||||||||    
T  27213524 cacgacacggatacagacacgccgacactgctaataatttcagaaaatcacataattcactgtaattatatgtgtcgg 27213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 4786405 - 4786342
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| ||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  4786405 gacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggt 4786342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 11803259 - 11803310
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  11803259 gacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgt 11803310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 31236656 - 31236581
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| |||||| |||| |||||||||| ||||||| | ||||||||| |||||||| |||||||||||||||||||    
T  31236656 gacaaggatacggacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggt 31236581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 11927148 - 11927090
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||||||||||||| | | ||||||| ||||||||||||||||||||||||||||    
T  11927148 gccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggt 11927090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 11944642 - 11944720
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||||||| |  ||| |||||||||||||||||| | | ||||||| |||| |||||||||||||||||||||||    
T  11944642 cacgacacggatgctaacacgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggt 11944720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 12606889 - 12606833
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| ||||||| | |||||||||||||||||| |||||||||||||||||||    
T  12606889 cgacactgctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggt 12606833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 13844663 - 13844600
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| |||||||||| ||||||| | ||||||||| |||||| |||||||||||||||||||||    
T  13844663 gacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggt 13844600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 28385076 - 28384998
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || ||||  ||||||| ||||||||||| |  |||||  ||||||||||||||||||||||||||||    
T  28385076 cacgacacggacactgacataccgacaccgttaataatatgaataaatctcataattcagtgtaattatatgtgtcggt 28384998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 34897068 - 34897138
Alignment:
Q  150 acggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||| ||||||| | |||||| | ||||||| | ||||||||| ||||||||||||||||||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 24362283 - 24362209
Alignment:
Q  145 acgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||| || || |||| |||||||| | ||||||| | ||| ||||| |||||||||||||||||||||||||    
T  24362283 acgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 31580187 - 31580133
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||| |||||||||| ||||||||||| |||||| |||||||||||| ||||||    
T  31580187 cgacaatgttaataatttaagaaaatcacataattgagtgtaattataggtgtcg 31580133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 12570567 - 12570514
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||| ||||||| |||||||| || |||||| |||||||||||||||||||    
T  12570567 gacactgctaataatttaagaaaaacacataattaagtgtaattatatgtgtcg 12570514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 26902216 - 26902179
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggt 26902179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 14134707 - 14134754
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||||| |||||||||||||||||||| |||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatatatgtcggt 14134754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 14731712 - 14731763
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||| ||||||| | ||||||||| |||||| |||||||||||||||||    
T  14731712 gacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 33382070 - 33382023
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||||||||| | ||||||||| ||||||||||||||||||    
T  33382070 taataatttaagaaaatgacataattcagagtaattatatgtgtcggt 33382023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 33405439 - 33405388
Alignment:
Q  171 ctgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| | |||||| || |||||| |||||||||||||||||||||    
T  33405439 ctgttaataatttgagaaaaacacataatttagtgtaattatatgtgtcggt 33405388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 34222955 - 34223002
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||| ||||||| |||||| |||||||||||||||||||||    
T  34222955 taataatttaataaaatcacataattaagtgtaattatatgtgtcggt 34223002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 39954346 - 39954283
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| |||||||| | ||||||| | ||||||||| |||||| |||||||||||||||| ||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacggt 39954283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 8847277 - 8847311
Alignment:
Q  188 aaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||| ||||||||||||||||||||||||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcggt 8847311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 4611532 - 4611589
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||| | ||||||| | |||||||||||||||||||||| |||||    
T  4611532 ccgacaccgctaataatttgagaaaataacataattcagtgtaattatatgtctcggt 4611589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 18964195 - 18964232
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  18964195 agaaaatcacataattcaatgtaattatatgtgtcggt 18964232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 3025559 - 3025603
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||| | ||||||||| ||||||||||||||||||| |||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtc 3025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 14634201 - 14634153
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatat 214  Q
    |||||| | ||| ||| ||||||||| ||||||||||||||||||||||    
T  14634201 cgacaccgctaacaatttaagaaaattatataattcagtgtaattatat 14634153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 18407708 - 18407772
Alignment:
Q  156 acagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||| |||||||| | |||||||  || ||||||| ||||||||||||||||| | ||||||    
T  18407708 acagacatgccgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 29776013 - 29776085
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgt 216  Q
    ||||||||||| |  |||| | |||||||| ||||||| | |||||||||  ||||||||| |||||||||||    
T  29776013 cacgacacggacattgacaagtcgacactgctaataatttgagaaaatcacgtaattcagtataattatatgt 29776085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 41832010 - 41831958
Alignment:
Q  156 acagacaggccgacactgttaataatataagaaaatcatataattcagtgtaa 208  Q
    ||||||| |||||||| ||||||||| | | ||||||| ||||||||||||||    
T  41832010 acagacatgccgacacagttaataatttgaaaaaatcacataattcagtgtaa 41831958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 9658856 - 9658934
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| |||||||| | ||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  9658856 cacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggt 9658934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 7996445 - 7996382
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  7996445 gacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggt 7996382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 8022356 - 8022419
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  8022356 gacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggt 8022419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 9025553 - 9025498
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||||||| | ||||||||| ||||||||||||||||||||||||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggt 9025498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 13364772 - 13364709
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| |||||||||| | ||||| | ||||||||||||||||||||||||| ||||||||||||    
T  13364772 gacatgccgacactgcttataatttgagaaaatcatataattcagtgtaatcatatgtgtcggt 13364709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 5732592 - 5732514
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||| || |||| |||||||| ||||||||| | ||||||||| ||| || |||||||||||||||||||||    
T  5732592 cacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggt 5732514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 9027155 - 9027233
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| |||||||| | ||||||| | ||| ||||| ||||||| ||||||||||||||||||||    
T  9027155 cacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggt 9027233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 9629360 - 9629438
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||||||||  |||| |||||||| |  |||||| | ||||||||| |||||||| |||||||||||||||||||    
T  9629360 cacgacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggt 9629438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 21924997 - 21924939
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||||| ||||||| | |||| |||| ||||||||||||||||||||||||||||    
T  21924997 gccgacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggt 21924939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 17341748 - 17341671
Alignment:
Q  142 tgcacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||||||||  || |||| |||||||| ||||||||| | | ||||||| ||||||||||||||||||| |||||    
T  17341748 tgcacgacacgggcactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 19040339 - 19040404
Alignment:
Q  154 atacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    |||| |||| |||||||| | ||||||| | ||||||||| |||||||||||||||||||||||||    
T  19040339 atactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 26562681 - 26562742
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||| |||||||||| ||| ||| | ||||||||| ||||||||||||||||||||||||||    
T  26562681 gacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 26562742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 7265644 - 7265597
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||    
T  7265644 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggt 7265597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 19147842 - 19147897
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||| ||||||||| |||||||||||||||  |||| ||||||||||||||||||    
T  19147842 gacaccgttaataatttaagaaaatcatatagatcagagtaattatatgtgtcggt 19147897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 3398596 - 3398673
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| |||||||| | ||||||| | | ||||||||||||||||||||||||||| || |||||    
T  3398596 cacgacacggacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaattataagtatcggt 3398673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 7086772 - 7086850
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| || || |||| | || ||||| ||||||| | ||||||||| |||||| |||||||||||||||||||||    
T  7086772 cacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggt 7086850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 7938093 - 7938171
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||| || |||| |||||||| | ||||||| | | |||||||||||||| |||||||||||| ||||||||    
T  7938093 cacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggt 7938171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 8389523 - 8389485
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattata 213  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  8389523 taataatttaagaaaatcatataattcagtgtaattata 8389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 17411917 - 17411876
Alignment:
Q  177 ataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  17411917 ataatttaagaaaatcatataattcagtataattatatgtgt 17411876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 677829 - 677885
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatg 215  Q
    |||| |||||||||||||||||| | |||||||||||||||  |||||| |||||||    
T  677829 gacacgccgacactgttaataatttgagaaaatcatataatatagtgtatttatatg 677885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 13851713 - 13851789
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||||||| || |||| | |||||| | ||||||| | ||||||| |  |||||||||||||||||||||||||    
T  13851713 cacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 13851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 21142123 - 21142171
Alignment:
Q  172 tgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||||||||| | |||||||||||||||||||| || ||||||||||||    
T  21142123 tgttaataatttgagaaaatcatataattcagtctagttatatgtgtcg 21142171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 222
Target Start/End: Original strand, 7027262 - 7027297
Alignment:
Q  187 aaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||||||||||||||||||||||||||||    
T  7027262 aaaatcacataattcagtgtaattatatgtgtcggt 7027297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 7723309 - 7723254
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||||||| | |||||||||||||||||||  ||||||||||| |||||    
T  7723309 gacactgctaataatttgagaaaatcatataattcagcataattatatgtatcggt 7723254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 9617442 - 9617489
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||||| |||||||| |||||||||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggt 9617489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 11591911 - 11591876
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||||| ||||||||||||||||||||||||||    
T  11591911 agaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 30851599 - 30851655
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||||| ||||||| ||||||||||  | |||||| |||||||||||||||||||    
T  30851599 gccgacactgctaataatttaagaaaatc--acaattcaatgtaattatatgtgtcggt 30851655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 32511717 - 32511674
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||    
T  32511717 taataatttaagaaaatcacataattcagtgtaattataagtgt 32511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 33001356 - 33001293
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| |||||||||| ||||||| | | ||||||| |||||| | |||||||||||||||||||    
T  33001356 gacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggt 33001293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 426596 - 426518
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| |||||||| ||||||||| | | ||||||| |||||| | |||||||| | ||||||||    
T  426596 cacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggt 426518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 7377968 - 7378034
Alignment:
Q  156 acagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||  ||||||| | ||| ||| | ||||||||| |||||||| |||||||||||||||||||    
T  7377968 acagacaccccgacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggt 7378034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 7977912 - 7977834
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| |||||| |||| |||||||| | ||||||| | | ||||| | ||||||||||||||||| | ||||||||    
T  7977912 cacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggt 7977834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 10294084 - 10294162
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||||||||| |||| ||||| || | ||||||| | ||| ||||  ||| |||| |||||||||||||||||||    
T  10294084 cacgacacggatactgacatgccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggt 10294162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 16766674 - 16766752
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||| || |||| |||||||| | ||||||| | | ||||||| ||||||||||||||||| | ||||||||    
T  16766674 cacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 16766752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 30866195 - 30866149
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcgg 221  Q
    ||||||| | ||||||||| |||||||| ||||||||||||||||||    
T  30866195 taataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 34073429 - 34073351
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| ||| |||  | ||||||| | ||||||||  ||||||||||||||||||||| ||||||    
T  34073429 cacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggt 34073351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 2153966 - 2153893
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||||||| || |||| ||||||||    |||||| ||||||||| |||||||| |||||||||||| ||||||    
T  2153966 gacacggacaccgacacgccgacacgaacaataatttaagaaaatgatataatttagtgtaattataggtgtcg 2153893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 13360413 - 13360376
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  13360413 agaaaatcacataattcagtgtaattatatgtttcggt 13360376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 19044442 - 19044519
Alignment:
Q  145 acgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||| ||| || |||| ||||||||   ||||||| | |||| |||| |||||||||||| |||||||||||||||    
T  19044442 acgacatggacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggt 19044519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 24832596 - 24832641
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||| | |||||||| ||||||| |||||||||||||||||||    
T  24832596 taataatttgagaaaatcttataatttagtgtaattatatgtgtcg 24832641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 2224234 - 2224270
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaatta 211  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  2224234 taataatttaaaaaaatcatataattcagtgtaatta 2224270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 6389720 - 6389796
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||||||| ||  ||| |||||||| | ||||||| | ||||||| |||||||| |||||||| ||| ||||||    
T  6389720 cacgacacggacactcacacgccgacacggataataatttgagaaaatgatataatttagtgtaatcataggtgtcg 6389796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 8101105 - 8101137
Alignment:
Q  187 aaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||||||||| |||||||||||||||||||    
T  8101105 aaaatcatataatccagtgtaattatatgtgtc 8101137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 9195814 - 9195758
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||  ||||||| | ||||||| | |||||| |||||||||||||||||||||    
T  9195814 cgacactcctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggt 9195758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 12686455 - 12686408
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattata 213  Q
    ||||||||| ||||||| ||||||||||| || ||||||||||||||||    
T  12686455 ccgacactgctaataatttaagaaaatcacat-attcagtgtaattata 12686408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 17302355 - 17302399
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||| ||||||||||| ||||||  |||||||||||||||||    
T  17302355 taataatttaagaaaatcacataattttgtgtaattatatgtgtc 17302399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 23771559 - 23771622
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaatta 211  Q
    |||||||| || |||| |||||||| ||||||||| ||| ||||| ||||| |||||||||||||    
T  23771559 gacacggacacggacacgccgacacagttaataatttaa-aaaattatatacttcagtgtaatta 23771622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 31579283 - 31579239
Alignment:
Q  168 acactgttaataatataagaaaatcatataattcagtgtaattat 212  Q
    |||| ||||||||| | ||||||||| ||||||||||||||||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 9e-16; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 39279667 - 39279730
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| ||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  39279667 gacacgccaacaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcggt 39279730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 16069333 - 16069263
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtg 217  Q
    |||||||| || |||| |||||||| ||||||||| ||| |||||||||||||||||||||||||| ||||    
T  16069333 gacacggacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattatttgtg 16069263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 21616739 - 21616813
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||||||| || |||| |||||||| | ||||||| | ||||||||| ||||||||||||||||||||||||    
T  21616739 cacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 30527653 - 30527599
Alignment:
Q  168 acactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||||||||| | |||||||||||||||| |||||||||||||||||||||    
T  30527653 acactgttaataatttgagaaaatcatataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 35449505 - 35449565
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    |||| ||| |||||||||||||| | ||||||||| | |||||||||||||||||||||||    
T  35449505 gacaagccaacactgttaataatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 23718006 - 23718081
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| || ||||  ||||||| | ||||||| | ||||| ||| ||||||||||||||||||||||||||||    
T  23718006 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggt 23718081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 24105678 - 24105753
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| || ||||  ||||||| | ||||||| | ||||| ||| ||||||||||||||||||||||||||||    
T  24105678 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggt 24105753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 187 - 222
Target Start/End: Complemental strand, 34691844 - 34691809
Alignment:
Q  187 aaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||||||||||||||||||||||||||||    
T  34691844 aaaatcatataattcagtgtaattatatgtgtcggt 34691809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 187 - 222
Target Start/End: Complemental strand, 34714256 - 34714221
Alignment:
Q  187 aaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||||||||||||||||||||||||||||    
T  34714256 aaaatcatataattcagtgtaattatatgtgtcggt 34714221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 30404929 - 30404855
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcgg 221  Q
    |||||||| || |||| |||||||| ||||||||| | | ||||||| ||||||||||||||||| | |||||||    
T  30404929 gacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 30404855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 31808075 - 31808129
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||| | ||||||| ||| ||||||| |||||||||||||||||||||||||    
T  31808075 ccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 18421941 - 18422018
Alignment:
Q  145 acgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||||| || |||| ||||||||  |||||||| ||| || |||| ||||||||||||||||| | ||||||||    
T  18421941 acgacacggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggt 18422018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 20242768 - 20242731
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  20242768 agaaaatcacataattcagtgtaattatatgtgtcggt 20242731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 21782885 - 21782832
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattat 212  Q
    |||| |||||||||| ||||||| | ||||||||| ||||||||||||||||||    
T  21782885 gacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 35056886 - 35056923
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||| |||||||||||||||||||||||||||||||    
T  35056886 agaaaaccatataattcagtgtaattatatgtgtcggt 35056923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 37411311 - 37411250
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||| |||||||| | ||||||| | ||||||||| |||||||||||| |||||||||||||    
T  37411311 gacatgccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 5367200 - 5367247
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | || |||||| ||||||||||||||||||||||||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtgtcggt 5367247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 10548011 - 10547933
Alignment:
Q  145 acgacacggatacagacaggccgacactgttaataatataag--aaaatcatataattcagtgtaattatatgtgtcgg 221  Q
    |||||||||| || |||| | |||||| ||||||||| |||   ||||||||||||||||||||| |||||||| ||||    
T  10548011 acgacacggacactgacacgtcgacaccgttaataatttaaataaaaatcatataattcagtgtagttatatgtatcgg 10547933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 44860328 - 44860375
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||||  ||||||||||||||||||||||||||||    
T  44860328 taataatttgagaaaatcgcataattcagtgtaattatatgtgtcggt 44860375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 1239712 - 1239666
Alignment:
Q  174 ttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||||||| |||||||||||||||||   ||||||||||||||||||    
T  1239712 ttaataatttaagaaaatcatataatcatgtgtaattatatgtgtcg 1239666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 18276518 - 18276576
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| | ||||||| | |||||||||  ||||||||||||||||| |||||||||    
T  18276518 gccgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggt 18276576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 19573970 - 19574024
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattata 213  Q
    |||| |||||||| | ||||||| ||||||||| | |||||||||||||||||||    
T  19573970 gacacgccgacaccgataataatttaagaaaataacataattcagtgtaattata 19574024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 20539756 - 20539678
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| | |||||| | ||||||| | | |||||||||||||| |||||||||| | ||||||||    
T  20539756 cacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggt 20539678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 22084890 - 22084848
Alignment:
Q  168 acactgttaataatataagaaaatcatataattcagtgtaatt 210  Q
    |||| ||||||||| | ||||||||||||||||||||||||||    
T  22084890 acaccgttaataatttgagaaaatcatataattcagtgtaatt 22084848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 18889632 - 18889595
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  18889632 agaaaatcacataattcagtgtaatcatatgtgtcggt 18889595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 34785023 - 34784986
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  34785023 agaaaatcacataatttagtgtaattatatgtgtcggt 34784986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 38355928 - 38355891
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  38355928 agaaaatcacataattcagtgtgattatatgtgtcggt 38355891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 14996303 - 14996227
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatat-aagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| || |||| |||||||| | ||||||| | || |||||||||||||| |||||||||| | ||||||||    
T  14996303 gacacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggt 14996227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 17776595 - 17776639
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||| |||||||| || |||| ||||||||||||||||||||    
T  17776595 taataatttaagaaaaccacataagtcagtgtaattatatgtgtc 17776639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 24975385 - 24975329
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||| | ||||||| | |||||||| ||||||||||||||| |||||| ||||||    
T  24975385 cgacaccgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggt 24975329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 28524447 - 28524479
Alignment:
Q  188 aaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||||| ||||||||||||||||||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcg 28524479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 28677906 - 28677958
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgt 216  Q
    |||||||| | ||||||| | | ||||||| ||||||||||||||||||||||    
T  28677906 gccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 9e-16; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 52903229 - 52903304
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| ||  ||| ||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  52903229 gacacggacactaacacgccgataccgttaataatttaataaaatcatataattcagtgtaattatatgtgtcggt 52903304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 1864941 - 1864884
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||||||||| | ||||||||| ||||||||||||||||||||||||||||    
T  1864941 ccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggt 1864884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 13997875 - 13997938
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| |||||||| |||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  13997875 gacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggt 13997938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 13436455 - 13436509
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    |||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||    
T  13436455 gccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgt 13436509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 39130849 - 39130771
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| |||||  |||| || |||||| |||||||| | ||||||| |||||||| |||||||||||||||||||||    
T  39130849 cacgacatggatattgacacgctgacactattaataattttagaaaattatataatttagtgtaattatatgtgtcggt 39130771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 1486790 - 1486713
Alignment:
Q  145 acgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||||| |||| || ||||| | ||||||| | | ||||||| ||||||||||||||||||| ||||||||    
T  1486790 acgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggt 1486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 38503318 - 38503375
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  38503318 ccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggt 38503375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 12443537 - 12443469
Alignment:
Q  149 cacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtg 217  Q
    ||||||||| |||| |||||||| | ||||||| | ||||||||| |||||||||||||||| ||||||    
T  12443537 cacggatacggacacgccgacacagctaataatttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 398847 - 398772
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||||||| || |||| |||||||| | ||||||| | | ||||||| ||||||||||||||||||| |||||    
T  398847 cacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 15641109 - 15641042
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatat 214  Q
    |||||||| || |||| |||||||||| ||||||| ||||||||||| || ||||||||||| |||||    
T  15641109 gacacggacactgacatgccgacactgctaataatttaagaaaatcacatgattcagtgtaactatat 15641042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 36878453 - 36878516
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| |||||||| | ||||||| | ||||||||| ||||||||||||||||||| ||||||||    
T  36878453 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggt 36878516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 40181871 - 40181926
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||||||| | ||||||||| |||||||||||||||||||||| |||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtatcggt 40181926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 5376582 - 5376504
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| ||  ||| |||||||| | ||||||| ||||||||| | ||||||||||||||||| | ||||||||    
T  5376582 cacgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggt 5376504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 9709797 - 9709875
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| ||| |||| | ||||||| | ||||||||| |||||||  |||||||||||||||||||    
T  9709797 cacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggt 9709875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 21530678 - 21530744
Alignment:
Q  156 acagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| |||||||| ||||||||| | ||||||||||||||||  || |||||||| ||||||||    
T  21530678 acagacacgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggt 21530744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 2784554 - 2784611
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||||| ||| ||||||||||| |||||| ||| |||||||||||||||||    
T  2784554 ccgacaccgttaaaaatttaagaaaatcacataattgagtataattatatgtgtcggt 2784611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 30749858 - 30749895
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggt 30749895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 30771309 - 30771346
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggt 30771346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 34257970 - 34257913
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggtt 223  Q
    |||||| ||||||||| ||| ||||||| |||||| ||||||||||||| ||||||||    
T  34257970 cgacaccgttaataatttaataaaatcacataatttagtgtaattatatatgtcggtt 34257913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 34371731 - 34371768
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  34371731 agaaaatcacataattcagtgtaattatatgtgtcggt 34371768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 44482248 - 44482285
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  44482248 agaaaatcacataattcagtgtaattatatgtgtcggt 44482285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 7918262 - 7918218
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 20157410 - 20157354
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||| | ||||||| | ||||||||| ||||||||||||||| ||||||||||||    
T  20157410 cgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggt 20157354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 19324561 - 19324612
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtg 217  Q
    |||||||| | ||||| | ||||||||| |||||||||||||||||||||||    
T  19324561 cgacactgctgataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 19562688 - 19562629
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    |||| |||||||||| ||||||| | ||||||||  ||| ||||||||||||||||||||    
T  19562688 gacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgt 19562629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 25098622 - 25098563
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    |||| |||||||| | | ||||| | ||||||||| ||||||||||||||||||||||||    
T  25098622 gacaagccgacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 35999373 - 35999330
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||    
T  35999373 taataatttaagaaaatcatataatttagtataattatatgtgt 35999330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 46348462 - 46348387
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| || |||| |||||||| | ||||||| | | |||||||||||||| |||||||||| | ||||||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggt 46348387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 222
Target Start/End: Complemental strand, 48148076 - 48148041
Alignment:
Q  187 aaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||||||||||||||||||||||| |||||||    
T  48148076 aaaatcatataattcagtgtaattatatatgtcggt 48148041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 2896199 - 2896125
Alignment:
Q  148 acacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| || |||| |||||||| | ||||||| | ||||||||| |||||||||||||  ||||| |||||||    
T  2896199 acacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggt 2896125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 5898328 - 5898270
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| | ||||||| | | ||||||| ||||||||||||||||||||| ||||||    
T  5898328 gccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggt 5898270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 6427327 - 6427401
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    |||| |||||| || |||| ||| |||| | ||||||| | ||||||||| |||||||| |||||||||||||||    
T  6427327 cacggcacggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 6427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 10233271 - 10233305
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||||| |||||||||||||||||||||||||    
T  10233271 agaaaatcacataattcagtgtaattatatgtgtc 10233305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 16252944 - 16252894
Alignment:
Q  168 acactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    |||| |||||||||  |||||||| |||| |||||||||||||||||||||    
T  16252944 acaccgttaataattcaagaaaatgatatgattcagtgtaattatatgtgt 16252894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 17705626 - 17705592
Alignment:
Q  186 gaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||||||| ||||||||||||||||||||||||||    
T  17705626 gaaaatcacataattcagtgtaattatatgtgtcg 17705592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 25361904 - 25361938
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||||| |||||||||||||||||||||||||    
T  25361904 agaaaatcacataattcagtgtaattatatgtgtc 25361938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 29163451 - 29163385
Alignment:
Q  156 acagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| |||||||| | ||| ||| || |||||||| |||||||| | |||||||||||||||||    
T  29163451 acagacacgccgacaccgctaaaaatttaggaaaatcacataattcaatttaattatatgtgtcggt 29163385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 39953208 - 39953150
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| | ||||||| | ||||||||| |||||| ||||||||| |||||||||||    
T  39953208 gccgacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggt 39953150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 10577817 - 10577740
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcgg 221  Q
    ||||||||||| || |||| |||||||| | ||||  | | ||||||||| | ||| |||||||||||||||||||||    
T  10577817 cacgacacggacaccgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcgg 10577740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 12707924 - 12707883
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgt 216  Q
    ||||||| |||||||||||||||||| |||| ||||||||||    
T  12707924 taataatttaagaaaatcatataatttagtgcaattatatgt 12707883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 12713378 - 12713337
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgt 216  Q
    ||||||| ||||||||||| |||||| |||||||||||||||    
T  12713378 taataatttaagaaaatcacataatttagtgtaattatatgt 12713337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 12717469 - 12717428
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgt 216  Q
    ||||||| ||||||||||| |||||| |||||||||||||||    
T  12717469 taataatttaagaaaatcacataatttagtgtaattatatgt 12717428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 17831598 - 17831537
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||| |||||||| | ||||||| | ||||||||| || |||||||||||| ||||||||||    
T  17831598 gacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcg 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 34298413 - 34298482
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattata 213  Q
    ||||||||||| || ||||  |||||||   ||||||| | ||||||||| |||||||||||||||||||    
T  34298413 cacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 9629960 - 9629904
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||| | ||||||| | | |||||||||||||||||||| |||||| ||||||||    
T  9629960 cgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggt 9629904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 38076030 - 38075974
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| ||||||| | || |||||| |||| |||||||||| ||||||||||||    
T  38076030 cgacactgctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcggt 38075974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 1213296 - 1213227
Alignment:
Q  150 acggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||||||||| |  ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  1213296 acggatacagacacgttgacactgttaataatttaa-aaaattatataattcagtgtaattatatgtgtcg 1213227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 26504359 - 26504303
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  26504359 cgacactgctaataatttaagaaaatcaaatagttcagtgtaattatatgtgtcggt 26504303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 13134447 - 13134503
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||||||||| | ||||| ||||||||||| |||||| |||||||||||||||||||    
T  13134447 gccgacactgcttataatttaagaaaatcacataatttagtgtaattatatgtgtcg 13134503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 21539934 - 21539879
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatat 214  Q
    |||| ||||||||  |||||||| |||||||||||||||||| |||||||||||||    
T  21539934 gacatgccgacaccattaataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 22440660 - 22440609
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtg 217  Q
    |||||| ||||||||| | ||||||||| |||||||||||||||||||||||    
T  22440660 cgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 40613442 - 40613504
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcgg 221  Q
    |||| |||||||| | ||||| | | ||||||||| |||||||||||||||||||||||||||    
T  40613442 gacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 46160885 - 46160951
Alignment:
Q  156 acagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| |||||| | ||||| ||||| ||||||| | |||||||||||| |||||||||||||||    
T  46160885 acagacacgccgacgccgttaaaaatatgagaaaataacataattcagtgttattatatgtgtcggt 46160951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 56257933 - 56257978
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattat 212  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||    
T  56257933 gacactgctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 5775410 - 5775362
Alignment:
Q  174 ttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| | ||||||||| |||||| |||||||||||||||||||||    
T  5775410 ttaataatttgagaaaatcacataattaagtgtaattatatgtgtcggt 5775362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 11931277 - 11931333
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||||||| ||||||||||| | ||||||| |||||| ||||||| |||||||||||    
T  11931277 gccgacaccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtgtcg 11931333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 24343484 - 24343560
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||||||||||  | |||| |||||||| | ||||||| | ||||||| | ||||||||||||||||||| ||||||    
T  24343484 cacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcg 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 35952691 - 35952627
Alignment:
Q  152 ggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgt 216  Q
    |||||| |||| |||| ||||| ||||||| | | |||||||||||||||| |||||||||||||    
T  35952691 ggatacggacacgccgccactgctaataatttgataaaatcatataattcaatgtaattatatgt 35952627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 40742588 - 40742644
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||||  |||||||| | |||||||||||||||  |||||||||||||||||||    
T  40742588 gccgacaccattaataatttgagaaaatcatataatctagtgtaattatatgtgtcg 40742644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 903928 - 903971
Alignment:
Q  173 gttaataatataagaaaatcatataattcagtgtaattatatgt 216  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||    
T  903928 gttaataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 216
Target Start/End: Original strand, 7970537 - 7970568
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgt 216  Q
    ||||||||||||||||||||||||||||||||    
T  7970537 agaaaatcatataattcagtgtaattatatgt 7970568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 216
Target Start/End: Complemental strand, 8402783 - 8402752
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgt 216  Q
    ||||||||||||||||||||||||||||||||    
T  8402783 agaaaatcatataattcagtgtaattatatgt 8402752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 14126173 - 14126118
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    |||||||||||||||||| | | ||| ||| ||||||||||||||||||| |||||    
T  14126173 gccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 36635332 - 36635375
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 16189690 - 16189764
Alignment:
Q  149 cacggatacagaca-ggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| |||| |||| |||| | ||| ||| | ||||||||| |||||||||||||||||| |||||||||    
T  16189690 cacggatacggacacggccaacaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggt 16189764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 49041945 - 49041876
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataa--tataagaaaatcatataattcagtgtaatta 211  Q
    |||||||| ||||| || |||| ||||| ||||||||  || || |||||||||||||||||||||||||    
T  49041945 cacgacactgataccgataggctgacacagttaataaattaaaaaaaaatcatataattcagtgtaatta 49041876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 999399 - 999354
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||| | || ||||||||||||| |||||||||||||||||||    
T  999399 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 8423779 - 8423722
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||| | ||||||||| |||||||||||||||||||  |||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggt 8423722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 9996838 - 9996895
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||||  |||||| | ||||||||| |||||||||| ||||||||||| |||||    
T  9996838 ccgacactgacaataatttgagaaaatcacataattcagtataattatatgtctcggt 9996895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 49653023 - 49652982
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgt 216  Q
    ||||||| ||||||||||| |||||||||| |||||||||||    
T  49653023 taataatttaagaaaatcagataattcagtataattatatgt 49652982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 3712560 - 3712516
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||| | |||||||||| ||||||| ||||||||||||||||    
T  3712560 taataatttgagaaaatcatgtaattcaatgtaattatatgtgtc 3712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 35161034 - 35161082
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattata 213  Q
    ||||||||| || ||||  |||||||||| |||||||||||||||||||    
T  35161034 ccgacactgctactaattcaagaaaatcacataattcagtgtaattata 35161082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 8383234 - 8383312
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| |  |||| |||||||| | ||||||| | ||||||||||||||||||||||||||||| ||||||||    
T  8383234 cacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggt 8383312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 25093499 - 25093557
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||||||| || | ||||||||| | ||||||||||||||||||||||||||    
T  25093499 gccgacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggt 25093557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 7614476 - 7614419
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||||||||| ||||||||||| |||||||||| ||||||||| |||||||    
T  7614476 ccgacacagttaataatttaagaaaatcacataattcagtataattatatatgtcggt 7614419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 14840373 - 14840304
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattata 213  Q
    |||||||||||||| |||| ||| ||||  |||||||| | ||||||||| |||||||||||||||||||    
T  14840373 cacgacacggataccgacacgccaacaccattaataatttcagaaaatcacataattcagtgtaattata 14840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 32804623 - 32804547
Alignment:
Q  143 gcacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    |||||||||||  |  |||| |||||||| ||||||||| | ||||||||| |||||| ||||||||||||||||||    
T  32804623 gcacgacacgggcattgacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 8039886 - 8039839
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  8039886 taataatttgagaaaattatataattcagtgtaattatatgtgtcggt 8039839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 10455782 - 10455841
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    |||| ||| |||||| ||||||||| |||||||||||||| | |||||||||||||||||    
T  10455782 gacacgccaacactgctaataatatgagaaaatcatataactaagtgtaattatatgtgt 10455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 15796376 - 15796309
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaatta 211  Q
    ||||||||||| |  |||| |||||||| ||||||||| | | |||||||||||||||||||||||||    
T  15796376 cacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaatta 15796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 1830335 - 1830396
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||| ||||||||| |||||||| ||||||||| | ||||||||||||||| ||| ||||||    
T  1830335 gacatgccgacacttttaataatttaagaaaatgacataattcagtgtaatcataggtgtcg 1830396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 4466661 - 4466604
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||| |||||||||||||||||||||||||  |||||||| ||||    
T  4466661 ccgacaccggtaataatttaagaaaatcatataattcagtgtagctatatgtgccggt 4466604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 7928448 - 7928505
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||| | | ||||||| ||||||||||||||||||||||||||||    
T  7928448 ccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggt 7928505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 11313861 - 11313808
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||||| ||||||| | ||||||||| |||||| |||||||||||||||||    
T  11313861 ccgacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 16192811 - 16192758
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||| ||||||||| | ||||||| | ||||||||||||||||||||||||    
T  16192811 ccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgt 16192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 16789018 - 16789063
Alignment:
Q  173 gttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  16789018 gttaataatttaaaaaaatcatataattcagtgtaattataagtgt 16789063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 187 - 220
Target Start/End: Original strand, 29508464 - 29508497
Alignment:
Q  187 aaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||||||||||||||||||||||||||||||    
T  29508464 aaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 24205123 - 24205047
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||||||| || |||| |||||||| | ||||||| | ||||||| | ||||| ||||||||||||| ||||||    
T  24205123 cacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 10690313 - 10690266
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | ||||||||| |||||||||||||||||||| |||||||    
T  10690313 taataatctgagaaaatcacataattcagtgtaattatatttgtcggt 10690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 222
Target Start/End: Complemental strand, 17005658 - 17005623
Alignment:
Q  187 aaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||||||||||||||||||| ||||||||    
T  17005658 aaaatcatataattcagtgtaattataagtgtcggt 17005623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 222
Target Start/End: Complemental strand, 40993374 - 40993339
Alignment:
Q  187 aaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||||||||||||||||||||||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcggt 40993339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 5339091 - 5339141
Alignment:
Q  150 acggatacagacaggccgacactgttaataatataagaaaatcatataatt 200  Q
    ||||||||||||| ||||||| |||||||||| | ||||||||| ||||||    
T  5339091 acggatacagacacgccgacattgttaataatttgagaaaatcacataatt 5339141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 8789620 - 8789554
Alignment:
Q  156 acagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||  ||||||| | | ||||| | ||||||||| ||||||| ||||||||||||||||||||    
T  8789620 acagacacaccgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcggt 8789554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 28917978 - 28918056
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| |||||||  | ||||||| | | ||||||| ||||||||||||||||| | ||||||||    
T  28917978 cacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 28918056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 13414487 - 13414524
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  13414487 agaaaatcaaataattcaatgtaattatatgtgtcggt 13414524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 21419508 - 21419467
Alignment:
Q  173 gttaataatataagaaaatcatataattcagtgtaattatat 214  Q
    ||||||||| ||||||||| |||||||||| |||||||||||    
T  21419508 gttaataatttaagaaaataatataattcaatgtaattatat 21419467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 25892468 - 25892513
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||| ||||||||| ||||||||||||||||| ||| ||||||    
T  25892468 taataatttaagaaaatgatataattcagtgtaatcataggtgtcg 25892513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 29112321 - 29112292
Alignment:
Q  185 agaaaatcatataattcagtgtaattatat 214  Q
    ||||||||||||||||||||||||||||||    
T  29112321 agaaaatcatataattcagtgtaattatat 29112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 30994940 - 30994895
Alignment:
Q  168 acactgttaataatataagaaaatcatataattcagtgtaattata 213  Q
    |||||| ||||||| ||||||||||| | |||||||||||||||||    
T  30994940 acactgctaataatttaagaaaatcacacaattcagtgtaattata 30994895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 35222956 - 35222993
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  35222956 agaaaatcacataattcaatgtaattatatgtgtcggt 35222993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 2731819 - 2731863
Alignment:
Q  174 ttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    |||||| | ||||||||||| |||||| |||||||||||||||||    
T  2731819 ttaatactttaagaaaatcacataattaagtgtaattatatgtgt 2731863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 9624641 - 9624689
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatg 215  Q
    ||||||| ||||||| | ||||||||| |||||||| ||||||||||||    
T  9624641 gacactgctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 11493412 - 11493372
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatg 215  Q
    ||||||| | ||||||||| |||||||||||||||||||||    
T  11493412 taataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 11507515 - 11507479
Alignment:
Q  186 gaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| |||||||||||||||||||||| |||||    
T  11507515 gaaaatcacataattcagtgtaattatatgtttcggt 11507479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 20691322 - 20691374
Alignment:
Q  170 actgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| ||||||| | ||||||| | ||||||||||||||| ||||||||||||    
T  20691322 actgataataatttgagaaaatgacataattcagtgtaatcatatgtgtcggt 20691374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 49505205 - 49505161
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||    
T  49505205 taataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 28847 - 28905
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| ||||||||| ||||||||||  |||||||| |||||||||||||||||||    
T  28847 gccgacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcggt 28905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 15410530 - 15410456
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||||||| || |||| |||||||| | ||||||| ||||||||| |||| |||||||||||| ||||||||    
T  15410530 cacgacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgt 15410456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 34879330 - 34879403
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||||||| |||| |||| ||| | ||| ||| | ||||||||||||||||||||||||| ||||||||||    
T  34879330 gacacggatacggacacgccggcaccgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcg 34879403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 3966495 - 3966558
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| |||||||| | ||||||| | ||||||||| | ||||||||||||||||||||||||||    
T  3966495 gacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggt 3966558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 16203874 - 16203799
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| ||  ||| |||||||||| ||||||| | ||||||||  |||||| |||||||||||||||||||||    
T  16203874 gacacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggt 16203799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 28588741 - 28588678
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| |||||||| | ||||||| | ||||||||| ||||||||||||||||||| ||||||||    
T  28588741 gacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggt 28588678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 34276870 - 34276917
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattat 212  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  34276870 ccgacacagttaataatttaagaaaatcataaaattcagtgtaattat 34276917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 21191138 - 21191060
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| |||||||| | ||||||| | | ||||||| ||||||||||||||||| | ||||||||    
T  21191138 cacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 21191060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 39758290 - 39758327
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  39758290 agaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 41091316 - 41091263
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||| |||| || | ||||||||| ||||||||||||||||||||||||||    
T  41091316 gacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcg 41091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 25888377 - 25888306
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatat--aagaaaatcatataattcagtgtaattata 213  Q
    |||||||||||||||||||  || |||||  ||||||| |  || |||||||||||||||||||||||||||    
T  25888377 cacgacacggatacagacacaccaacactactaataattttaaaaaaaatcatataattcagtgtaattata 25888306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 39205879 - 39205931
Alignment:
Q  166 cgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    |||||||| ||||||| | ||||||||||||||||  ||||||||||||||||    
T  39205879 cgacactgctaataatttgagaaaatcatataattaggtgtaattatatgtgt 39205931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 6471940 - 6471897
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgt 218  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||    
T  6471940 taataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 17925223 - 17925176
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||||||||||| |||||||| |||||| ||||||||||||    
T  17925223 taataatttaagaaaatcacataattcaatgtaataatatgtgtcggt 17925176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 23012459 - 23012412
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | |||||||||||||||| | |||||||||||||||||||    
T  23012459 taataatttgagaaaatcatataatttaatgtaattatatgtgtcggt 23012412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 30502439 - 30502392
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | |||||||||  |||||||||||||||||||||||||||    
T  30502439 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggt 30502392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 30542782 - 30542735
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | |||||||||  |||||||||||||||||||||||||||    
T  30542782 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggt 30542735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 18421900 - 18421846
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcgg 221  Q
    ||||||| | ||||| | ||||||||| ||||| |||||||||||||||||||||    
T  18421900 gacactgctgataatttgagaaaatcacataatccagtgtaattatatgtgtcgg 18421846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 22423894 - 22423816
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||||||||| ||||  | ||||||  ||||||| | ||||||||| |||||||| | ||||||||| |||||||    
T  22423894 cacgacacggatactgacaccctgacactactaataatttgagaaaatcacataattcaatataattatatatgtcggt 22423816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 24273089 - 24273039
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtg 217  Q
    ||||| |||| |||| | ||||||||| |||||||||||||||||||||||    
T  24273089 gacacagttattaatttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 24389125 - 24389175
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtg 217  Q
    ||||| |||| |||| | ||||||||| |||||||||||||||||||||||    
T  24389125 gacacagttattaatttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 16734863 - 16734923
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgt--aattatatgtgtcggt 222  Q
    |||||||| ||||||||| ||||||||| |||||||  |||||  ||||||||||||||||    
T  16734863 gccgacaccgttaataatttaagaaaattatataatcaagtgtgtaattatatgtgtcggt 16734923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 25863212 - 25863257
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||| | ||||||| ||||||||||||||||||||| ||||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattataagtgtcg 25863257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 33035839 - 33035810
Alignment:
Q  188 aaatcatataattcagtgtaattatatgtg 217  Q
    ||||||||||||||||||||||||||||||    
T  33035839 aaatcatataattcagtgtaattatatgtg 33035810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 12927662 - 12927706
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||| | |||||||||||||||| ||||||||||||| ||||    
T  12927662 taataatttgagaaaatcatataatttagtgtaattatatatgtc 12927706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 25817495 - 25817547
Alignment:
Q  167 gacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||| ||||||| ||| |||||||||| ||||||| | ||||||||||||    
T  25817495 gacactgctaataatttaaaaaaatcatatgattcagtatgattatatgtgtc 25817547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 27144455 - 27144515
Alignment:
Q  159 gacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    |||| |||||||| | ||||||| | || |||||| |||||| ||||||||||||||||||    
T  27144455 gacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 31682051 - 31682087
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcgg 221  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  31682051 agaaaatcatataatttagtgtaattatatgtatcgg 31682087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 32630786 - 32630742
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    ||||||| | ||||||| |||||||||| ||||||||||||||||    
T  32630786 taataatttgagaaaattatataattcaatgtaattatatgtgtc 32630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 135373 - 135316
Alignment:
Q  165 ccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| ||||||| | ||||||||| ||||||| ||||||||||||||||||||    
T  135373 ccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggt 135316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 1633 - 1699
Alignment:
Q  156 acagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| |||||||| ||||||||| | ||||||||||||||||  || |||||||| ||||||||    
T  1633 acagacacgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggt 1699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 21020 - 21098
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| || ||||| ||||||||| | ||||||||| |||| || || |||||||||||||||||    
T  21020 cacgacacggacactgacatgctgacacggttaataatttgagaaaatcacataagtcggtataattatatgtgtcggt 21098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 90850 - 90896
Alignment:
Q  174 ttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||    
T  90850 ttaataatttgagaaaatcatataattcagtgtaattatatatgtcg 90896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 44566 - 44529
Alignment:
Q  185 agaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  44566 agaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 3911 - 3864
Alignment:
Q  164 gccgacactgttaataatataagaaaatcatataattcagtgtaatta 211  Q
    |||||||| ||||||||| ||| ||||||| |||||||||||||||||    
T  3911 gccgacacggttaataatttaaaaaaatcacataattcagtgtaatta 3864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 9798 - 9751
Alignment:
Q  175 taataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | |||||||||  |||||||||||||||||||||||||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggt 9751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 46659 - 46726
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaatta 211  Q
    ||||||||||| |  |||| |||||||| ||||||||| | | ||||||| |||||||||||||||||    
T  46659 cacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 23397 - 23475
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||||| || || |||| |||||||| | ||||||   || ||||||| ||||||||||||||||||| ||||||||    
T  23397 cacgacacagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcggt 23475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 9875 - 9953
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| ||| || |||| |||||||| | ||||  | | ||||||||||| ||| ||||||||||||||||||||||    
T  9875 cacgacatggacaccgacacgccgacacagctaatttttttagaaaatcataaaatgcagtgtaattatatgtgtcggt 9953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 8775 - 8853
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| || |||| |||||||| | ||||||| | | |||||||||| ||| |||||||||| | ||||||||    
T  8775 cacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggt 8853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 70267 - 70333
Alignment:
Q  156 acagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||| | |||||| ||||||||| | | ||||| | ||||||||||||||||||| ||||||||    
T  70267 acagacatgtcgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcggt 70333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 53189 - 53235
Alignment:
Q  176 aataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||||| | ||||||||| ||||||||||||||||||| ||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggt 53235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 130459 - 130537
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    ||||||||||| |  |||| |||||||| ||||||| | | | ||||||| ||||||||||||||||| | ||||||||    
T  130459 cacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcggt 130537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 263453 - 263379
Alignment:
Q  145 acgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtc 219  Q
    |||||||||| || |||| | | |||||| ||||||| | |||||| || ||||||||||||||||||| |||||    
T  263453 acgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtc 263379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 51791 - 51855
Alignment:
Q  147 gacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaatta 211  Q
    |||||||| || |||| |||||||| | ||||||| | | ||||||| |||||||||||||||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 85021 - 84977
Alignment:
Q  178 taatataagaaaatcatataattcagtgtaattatatgtgtcggt 222  Q
    |||| ||||||||||||||||||  |||||||||||| |||||||    
T  85021 taatttaagaaaatcatataattatgtgtaattatatatgtcggt 84977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 225350 - 225274
Alignment:
Q  144 cacgacacggatacagacaggccgacactgttaataatataagaaaatcatataattcagtgtaattatatgtgtcg 220  Q
    ||||||||||| || |||| |||||||| | ||||||| | ||||||| | ||||| || |||||||||| ||||||    
T  225350 cacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcg 225274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University