View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13396_high_8 (Length: 359)
Name: NF13396_high_8
Description: NF13396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13396_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 9 - 341
Target Start/End: Complemental strand, 34796017 - 34795685
Alignment:
| Q |
9 |
gaagaatatgcaaacgaaaccaaaatagagaagggagtgaatgagtattgaagcaccacttgtctgaaagtttccaaactccacacatcttgaccgtcca |
108 |
Q |
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| T |
34796017 |
gaagaaaatgcaaacgaaaccaaaatagagaagggagtgaatgagtattgaagcaccacttgtctgaaagtttccaaactccacacatcttgaccgtcca |
34795918 |
T |
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| Q |
109 |
ggtatttgaaacaataatcctggcgtcaacaaaacaaacagcactattgaaacaaacactggtccccagtccgacatgttttgtgtttctacgtgtaatt |
208 |
Q |
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| T |
34795917 |
ggtatttgaaacaataatcctggcgtcaacaaaacaaacagcactattgaaacaaacactggtccccagtccgacatgttttgtgtttctacgtgtaatt |
34795818 |
T |
|
| Q |
209 |
gttgtgtttactgtatagaaatggaacaaaacacaaaacagaacggttgcgaatgagattataaatgggatgagtttgtacgtgtgcatgtgatggatat |
308 |
Q |
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| T |
34795817 |
gttgtgtttactgtatagaaatggaacaaaacacaaaacagaacggttgcgaatgagattataaatgggatgagtttgtacgtgtgcatgtgatggatat |
34795718 |
T |
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| Q |
309 |
gctttgatttaggagttaggtttgggatttaag |
341 |
Q |
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||||||||||||||||| ||||||||||||||| |
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| T |
34795717 |
gctttgatttaggagttgggtttgggatttaag |
34795685 |
T |
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