View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13399_low_7 (Length: 298)
Name: NF13399_low_7
Description: NF13399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13399_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 16 - 291
Target Start/End: Original strand, 31230298 - 31230573
Alignment:
| Q |
16 |
aaattttggggtaagtgttccacactgcattatttatcatatttgttgtatattctaatatcacattgtaaagcaagtggatcttatatgtgtgataaac |
115 |
Q |
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| T |
31230298 |
aaattttggggtaaatgttccacactgcattatttatcatatttgttgtatattctaatatcacattgtaaagcaagtggatcttatatgtgtgatacac |
31230397 |
T |
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| Q |
116 |
tgttgtaaaagcattacacattggtcagataaactatatgttatgcttactaaagaaaaaggtcattcagataaatctattgttgcaaatggaggttaaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31230398 |
tgttgtaaaagcattacacattggtcagataaactatatgttatgcttactaaagaaaaaggtcattcagataaatctattgttgcaaatggaggttaaa |
31230497 |
T |
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| Q |
216 |
gtagaagtgacatggatgaattgaattagaatatatatcagataacatattttctattatggtttcttcatttcag |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
31230498 |
gtagaagtgacatggatgaattgaattagaatatatatcagataacatattttctattatggtttcttcttttcag |
31230573 |
T |
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