View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13402_high_17 (Length: 362)

Name: NF13402_high_17
Description: NF13402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13402_high_17
NF13402_high_17
[»] chr1 (34 HSPs)
chr1 (40-360)||(41394288-41394610)
chr1 (39-309)||(20931410-20931682)
chr1 (39-309)||(20913102-20913367)
chr1 (38-309)||(20893551-20893825)
chr1 (39-309)||(20445744-20446019)
chr1 (4-310)||(45051453-45051759)
chr1 (39-309)||(37844374-37844649)
chr1 (39-309)||(20531509-20531783)
chr1 (39-224)||(2116319-2116506)
chr1 (38-230)||(22227873-22228066)
chr1 (38-230)||(22232570-22232763)
chr1 (38-224)||(5072388-5072576)
chr1 (38-224)||(18601118-18601306)
chr1 (104-236)||(51452623-51452755)
chr1 (275-357)||(21860332-21860414)
chr1 (275-351)||(44034829-44034905)
chr1 (275-357)||(41218726-41218808)
chr1 (244-350)||(27675086-27675191)
chr1 (1-51)||(22227817-22227867)
chr1 (1-51)||(22232514-22232564)
chr1 (137-220)||(22143361-22143445)
chr1 (137-219)||(17609091-17609174)
chr1 (140-230)||(17148735-17148825)
chr1 (140-230)||(18059756-18059846)
chr1 (140-309)||(46523557-46523727)
chr1 (121-220)||(21195160-21195261)
chr1 (140-230)||(17004806-17004896)
chr1 (140-230)||(38055089-38055179)
chr1 (272-309)||(7640851-7640888)
chr1 (293-350)||(13376711-13376768)
chr1 (275-308)||(15861327-15861360)
chr1 (293-350)||(20177513-20177570)
chr1 (272-309)||(22035749-22035786)
chr1 (137-200)||(37233880-37233944)
[»] scaffold0413 (2 HSPs)
scaffold0413 (39-309)||(5990-6261)
scaffold0413 (1-45)||(6274-6318)
[»] chr2 (58 HSPs)
chr2 (39-357)||(20627190-20627511)
chr2 (39-309)||(462803-463075)
chr2 (40-357)||(19794581-19794901)
chr2 (44-357)||(43642833-43643150)
chr2 (40-309)||(36982364-36982638)
chr2 (39-309)||(8891307-8891581)
chr2 (40-309)||(24341309-24341586)
chr2 (76-236)||(25265390-25265550)
chr2 (40-232)||(7507848-7508041)
chr2 (38-236)||(17396653-17396852)
chr2 (104-236)||(19689401-19689533)
chr2 (38-224)||(19886661-19886849)
chr2 (104-236)||(23820202-23820334)
chr2 (104-236)||(14906440-14906572)
chr2 (104-236)||(20015142-20015274)
chr2 (275-357)||(22275043-22275125)
chr2 (275-357)||(22284276-22284358)
chr2 (278-357)||(15633538-15633617)
chr2 (214-309)||(22863169-22863267)
chr2 (140-230)||(12728560-12728650)
chr2 (140-230)||(34824643-34824733)
chr2 (137-220)||(24884849-24884933)
chr2 (140-230)||(12635866-12635956)
chr2 (1-43)||(19886863-19886905)
chr2 (140-230)||(23778043-23778133)
chr2 (138-217)||(19660044-19660124)
chr2 (139-213)||(19669116-19669191)
chr2 (140-230)||(3798601-3798691)
chr2 (140-230)||(8944014-8944104)
chr2 (140-230)||(42177967-42178057)
chr2 (293-350)||(43646232-43646289)
chr2 (137-220)||(19666691-19666775)
chr2 (140-219)||(43646059-43646139)
chr2 (137-219)||(68155-68238)
chr2 (275-309)||(9652796-9652830)
chr2 (140-230)||(11231336-11231426)
chr2 (140-230)||(12641640-12641730)
chr2 (140-230)||(16935761-16935851)
chr2 (140-230)||(17006421-17006511)
chr2 (272-310)||(19689314-19689352)
chr2 (140-230)||(22513183-22513273)
chr2 (140-230)||(24685779-24685869)
chr2 (140-230)||(28775805-28775895)
chr2 (121-200)||(9636891-9636972)
chr2 (272-309)||(14906354-14906391)
chr2 (272-309)||(23820383-23820420)
chr2 (275-308)||(25213370-25213403)
chr2 (293-350)||(25305769-25305826)
chr2 (277-309)||(3798520-3798552)
chr2 (277-309)||(8944153-8944185)
chr2 (277-309)||(12635785-12635817)
chr2 (277-309)||(12641559-12641591)
chr2 (277-309)||(12728699-12728731)
chr2 (277-309)||(16935900-16935932)
chr2 (277-309)||(17006560-17006592)
chr2 (298-350)||(19660221-19660273)
chr2 (1-37)||(19794923-19794959)
chr2 (277-309)||(42177886-42177918)
[»] scaffold0175 (2 HSPs)
scaffold0175 (39-309)||(882-1153)
scaffold0175 (1-46)||(1165-1210)
[»] chr8 (65 HSPs)
chr8 (40-357)||(16404852-16405169)
chr8 (39-309)||(16193643-16193914)
chr8 (39-309)||(43373392-43373666)
chr8 (78-309)||(24928716-24928949)
chr8 (40-224)||(6774258-6774443)
chr8 (39-224)||(24549047-24549233)
chr8 (40-236)||(17345636-17345832)
chr8 (38-220)||(21844576-21844760)
chr8 (38-220)||(21851969-21852153)
chr8 (38-224)||(30120786-30120974)
chr8 (104-236)||(5238218-5238350)
chr8 (38-224)||(16674392-16674580)
chr8 (104-236)||(22907214-22907346)
chr8 (104-236)||(24661248-24661380)
chr8 (104-236)||(43685677-43685809)
chr8 (275-357)||(274764-274846)
chr8 (275-357)||(641003-641085)
chr8 (275-357)||(826809-826891)
chr8 (275-357)||(24716714-24716796)
chr8 (38-161)||(222754-222879)
chr8 (38-161)||(736377-736502)
chr8 (38-161)||(860272-860397)
chr8 (275-357)||(39115596-39115678)
chr8 (137-220)||(26011657-26011741)
chr8 (140-230)||(22006256-22006346)
chr8 (1-43)||(222893-222935)
chr8 (1-43)||(736516-736558)
chr8 (1-43)||(860411-860453)
chr8 (140-230)||(13720926-13721016)
chr8 (140-230)||(16195399-16195489)
chr8 (244-309)||(31194217-31194281)
chr8 (137-220)||(15933461-15933545)
chr8 (137-220)||(21198152-21198236)
chr8 (141-220)||(23226076-23226156)
chr8 (137-220)||(25296321-25296405)
chr8 (137-220)||(25758341-25758425)
chr8 (140-230)||(13662263-13662353)
chr8 (4-51)||(24928996-24929043)
chr8 (103-161)||(691909-691967)
chr8 (140-230)||(16873049-16873139)
chr8 (137-220)||(5854777-5854861)
chr8 (274-350)||(21198005-21198081)
chr8 (76-200)||(33172330-33172455)
chr8 (137-219)||(17285367-17285450)
chr8 (140-230)||(271358-271448)
chr8 (140-230)||(644472-644562)
chr8 (140-230)||(830207-830297)
chr8 (5-43)||(21844774-21844812)
chr8 (5-43)||(21852167-21852205)
chr8 (140-230)||(22088792-22088882)
chr8 (275-309)||(24385652-24385686)
chr8 (275-309)||(41506709-41506743)
chr8 (272-309)||(5238399-5238436)
chr8 (293-350)||(17285543-17285600)
chr8 (272-309)||(22907128-22907165)
chr8 (272-309)||(24661162-24661199)
chr8 (121-220)||(37653616-37653717)
chr8 (4-37)||(43373687-43373720)
chr8 (272-309)||(43685858-43685895)
chr8 (277-309)||(13662182-13662214)
chr8 (277-309)||(13720845-13720877)
chr8 (277-309)||(16872968-16873000)
chr8 (76-220)||(18261471-18261616)
chr8 (121-199)||(22742910-22742990)
chr8 (137-220)||(23837361-23837445)
[»] scaffold0266 (2 HSPs)
scaffold0266 (39-309)||(3508-3780)
scaffold0266 (39-309)||(1189-1462)
[»] chr3 (80 HSPs)
chr3 (39-309)||(14842487-14842759)
chr3 (39-246)||(51158008-51158216)
chr3 (39-309)||(13838959-13839232)
chr3 (39-309)||(2049875-2050147)
chr3 (39-309)||(12030073-12030345)
chr3 (39-262)||(15858996-15859222)
chr3 (104-360)||(16743990-16744247)
chr3 (39-230)||(15936633-15936825)
chr3 (39-230)||(15938475-15938667)
chr3 (39-310)||(15614899-15615170)
chr3 (40-236)||(17912483-17912678)
chr3 (171-357)||(19231979-19232169)
chr3 (38-224)||(55316283-55316471)
chr3 (38-236)||(13975722-13975921)
chr3 (38-224)||(41270139-41270327)
chr3 (38-236)||(45860869-45861068)
chr3 (38-236)||(13954890-13955089)
chr3 (38-220)||(16821203-16821387)
chr3 (104-236)||(2449238-2449370)
chr3 (275-357)||(3992871-3992953)
chr3 (275-357)||(55513191-55513273)
chr3 (275-357)||(2844512-2844594)
chr3 (137-309)||(19260749-19260923)
chr3 (275-357)||(54037976-54038058)
chr3 (277-352)||(15857120-15857195)
chr3 (275-357)||(7854303-7854385)
chr3 (76-233)||(11986169-11986327)
chr3 (275-357)||(17955832-17955918)
chr3 (275-338)||(45581952-45582016)
chr3 (76-232)||(54651560-54651717)
chr3 (140-230)||(12264790-12264880)
chr3 (140-230)||(25058907-25058997)
chr3 (140-230)||(49232604-49232694)
chr3 (140-232)||(12902086-12902178)
chr3 (137-219)||(47784767-47784850)
chr3 (1-51)||(14842766-14842816)
chr3 (140-230)||(15468338-15468428)
chr3 (140-230)||(18911161-18911251)
chr3 (140-230)||(22275377-22275467)
chr3 (140-229)||(5228481-5228570)
chr3 (121-220)||(6228625-6228726)
chr3 (136-219)||(3576439-3576523)
chr3 (137-220)||(14080672-14080756)
chr3 (137-220)||(17191704-17191788)
chr3 (137-220)||(17204844-17204928)
chr3 (274-350)||(38810868-38810944)
chr3 (121-199)||(4145835-4145914)
chr3 (1-43)||(16821147-16821189)
chr3 (275-309)||(30153263-30153297)
chr3 (293-350)||(17205019-17205076)
chr3 (121-220)||(41661711-41661812)
chr3 (137-220)||(9590754-9590838)
chr3 (138-217)||(13301472-13301552)
chr3 (138-217)||(13312128-13312208)
chr3 (76-220)||(14814765-14814910)
chr3 (142-230)||(18897042-18897130)
chr3 (137-200)||(34560062-34560126)
chr3 (295-350)||(12031849-12031904)
chr3 (140-308)||(12812009-12812179)
chr3 (137-219)||(12953127-12953210)
chr3 (275-350)||(13301323-13301398)
chr3 (275-350)||(13311979-13312054)
chr3 (138-220)||(15517795-15517878)
chr3 (244-350)||(15876350-15876456)
chr3 (138-220)||(33368927-33369010)
chr3 (140-230)||(1467737-1467827)
chr3 (244-350)||(11328818-11328923)
chr3 (275-309)||(16261775-16261809)
chr3 (275-309)||(23492694-23492728)
chr3 (275-309)||(28558492-28558526)
chr3 (275-309)||(38168235-38168269)
chr3 (275-309)||(53771363-53771397)
chr3 (272-309)||(2449152-2449189)
chr3 (293-350)||(17191879-17191936)
chr3 (272-309)||(17912398-17912435)
chr3 (121-200)||(31412353-31412434)
chr3 (277-309)||(8268650-8268682)
chr3 (277-309)||(8275750-8275782)
chr3 (277-309)||(16933869-16933901)
chr3 (277-309)||(18911300-18911332)
[»] scaffold0023 (5 HSPs)
scaffold0023 (39-309)||(48663-48935)
scaffold0023 (38-224)||(36157-36345)
scaffold0023 (140-230)||(154005-154095)
scaffold0023 (1-42)||(36101-36142)
scaffold0023 (277-309)||(153924-153956)
[»] chr5 (66 HSPs)
chr5 (39-309)||(23507030-23507302)
chr5 (39-309)||(27182471-27182745)
chr5 (40-309)||(18530988-18531264)
chr5 (40-309)||(22053753-22054030)
chr5 (39-224)||(29188284-29188470)
chr5 (40-236)||(34939344-34939540)
chr5 (38-220)||(27009905-27010089)
chr5 (38-221)||(18777995-18778180)
chr5 (38-221)||(43443398-43443583)
chr5 (38-224)||(19499963-19500151)
chr5 (38-224)||(22366481-22366669)
chr5 (38-224)||(25426692-25426880)
chr5 (38-224)||(12438-12626)
chr5 (104-236)||(20623100-20623232)
chr5 (104-236)||(21233528-21233660)
chr5 (40-224)||(21073595-21073781)
chr5 (104-234)||(25900408-25900538)
chr5 (38-224)||(4199985-4200173)
chr5 (104-236)||(16536328-16536460)
chr5 (104-236)||(37052875-37053007)
chr5 (140-233)||(32950862-32950955)
chr5 (278-352)||(11584374-11584448)
chr5 (137-220)||(21310709-21310793)
chr5 (140-230)||(10777968-10778058)
chr5 (140-230)||(23514729-23514819)
chr5 (137-220)||(19862372-19862456)
chr5 (137-220)||(23981516-23981600)
chr5 (140-308)||(11211983-11212153)
chr5 (1-43)||(12382-12424)
chr5 (140-230)||(1219518-1219608)
chr5 (140-230)||(17471586-17471676)
chr5 (1-43)||(18778194-18778236)
chr5 (1-43)||(21073797-21073839)
chr5 (1-43)||(22366683-22366725)
chr5 (1-43)||(25426636-25426678)
chr5 (140-230)||(35791096-35791186)
chr5 (137-220)||(21297175-21297259)
chr5 (137-219)||(21222609-21222692)
chr5 (138-220)||(22885806-22885889)
chr5 (138-220)||(29918129-29918212)
chr5 (140-230)||(36989768-36989858)
chr5 (1-43)||(43443597-43443639)
chr5 (275-308)||(11343006-11343039)
chr5 (139-219)||(21617181-21617262)
chr5 (274-350)||(5450695-5450771)
chr5 (140-230)||(7425492-7425582)
chr5 (275-309)||(16105965-16105999)
chr5 (140-230)||(21932379-21932469)
chr5 (140-230)||(21938549-21938639)
chr5 (140-230)||(35582204-35582294)
chr5 (293-350)||(19862547-19862604)
chr5 (272-309)||(20623281-20623318)
chr5 (293-350)||(21222462-21222519)
chr5 (272-309)||(21233442-21233479)
chr5 (272-309)||(23328859-23328896)
chr5 (272-309)||(24616463-24616500)
chr5 (272-309)||(24712839-24712876)
chr5 (272-309)||(24745857-24745894)
chr5 (272-309)||(25900320-25900357)
chr5 (121-220)||(26559815-26559916)
chr5 (272-309)||(37053056-37053093)
chr5 (3-43)||(4200187-4200227)
chr5 (137-196)||(5450867-5450927)
chr5 (277-309)||(7425631-7425663)
chr5 (121-199)||(24084223-24084303)
chr5 (277-309)||(35791015-35791047)
[»] chr7 (70 HSPs)
chr7 (38-350)||(3060030-3060344)
chr7 (39-309)||(16211831-16212103)
chr7 (39-309)||(11580661-11580937)
chr7 (38-309)||(13036938-13037213)
chr7 (40-236)||(47481031-47481228)
chr7 (39-230)||(18253841-18254033)
chr7 (42-309)||(36052735-36053003)
chr7 (40-218)||(16478968-16479147)
chr7 (40-235)||(13321080-13321278)
chr7 (38-308)||(2437521-2437794)
chr7 (38-224)||(10989474-10989661)
chr7 (38-220)||(13572740-13572924)
chr7 (38-236)||(25292338-25292537)
chr7 (38-224)||(13911024-13911213)
chr7 (104-236)||(11516358-11516490)
chr7 (104-236)||(15441564-15441696)
chr7 (104-236)||(30262129-30262261)
chr7 (42-236)||(7293085-7293279)
chr7 (42-264)||(295936-296162)
chr7 (275-357)||(32493898-32493980)
chr7 (275-357)||(126736-126818)
chr7 (275-357)||(1936869-1936951)
chr7 (275-357)||(111121-111203)
chr7 (278-357)||(7283908-7283987)
chr7 (137-230)||(48622664-48622757)
chr7 (137-220)||(16914928-16915012)
chr7 (244-350)||(13377819-13377924)
chr7 (140-230)||(15950789-15950879)
chr7 (140-230)||(18980019-18980109)
chr7 (137-220)||(9611471-9611555)
chr7 (137-220)||(9839042-9839126)
chr7 (140-230)||(15927736-15927826)
chr7 (121-220)||(28722256-28722357)
chr7 (137-220)||(48356807-48356891)
chr7 (275-309)||(3049903-3049937)
chr7 (1-43)||(10989418-10989460)
chr7 (140-230)||(13758538-13758628)
chr7 (140-230)||(15760112-15760202)
chr7 (293-350)||(13389693-13389750)
chr7 (121-220)||(14271899-14272000)
chr7 (121-220)||(14935506-14935607)
chr7 (121-220)||(15363099-15363200)
chr7 (121-199)||(15358943-15359023)
chr7 (137-219)||(13377692-13377775)
chr7 (275-309)||(2029242-2029276)
chr7 (275-309)||(2190085-2190119)
chr7 (140-230)||(7822896-7822986)
chr7 (140-230)||(7830207-7830297)
chr7 (1-43)||(13911227-13911269)
chr7 (194-236)||(14113989-14114031)
chr7 (140-230)||(14250896-14250986)
chr7 (194-236)||(14423639-14423681)
chr7 (293-343)||(17223796-17223846)
chr7 (140-230)||(27101635-27101725)
chr7 (140-230)||(27108983-27109073)
chr7 (140-230)||(27176601-27176691)
chr7 (140-230)||(38783727-38783817)
chr7 (275-309)||(42056188-42056222)
chr7 (272-309)||(7293328-7293365)
chr7 (272-309)||(11516539-11516576)
chr7 (272-309)||(14113903-14113940)
chr7 (272-309)||(15441478-15441515)
chr7 (272-309)||(30262043-30262080)
chr7 (121-180)||(13448868-13448928)
chr7 (277-309)||(13758677-13758709)
chr7 (277-309)||(15862226-15862258)
chr7 (277-309)||(15927875-15927907)
chr7 (294-350)||(16919870-16919926)
chr7 (277-309)||(18979938-18979970)
chr7 (137-200)||(49047694-49047758)
[»] chr4 (55 HSPs)
chr4 (40-357)||(54118120-54118441)
chr4 (76-309)||(121992-122226)
chr4 (39-309)||(13246495-13246769)
chr4 (4-309)||(10104170-10104483)
chr4 (40-309)||(15675009-15675286)
chr4 (40-207)||(31115695-31115863)
chr4 (38-236)||(13048221-13048421)
chr4 (38-220)||(10644283-10644467)
chr4 (104-236)||(26680331-26680463)
chr4 (38-224)||(47357718-47357906)
chr4 (104-236)||(10488693-10488825)
chr4 (104-236)||(16327926-16328058)
chr4 (7-220)||(40885570-40885784)
chr4 (275-357)||(25119059-25119141)
chr4 (163-309)||(33240890-33241043)
chr4 (275-357)||(5682380-5682462)
chr4 (81-232)||(7850107-7850259)
chr4 (42-230)||(17145655-17145845)
chr4 (140-230)||(18169138-18169228)
chr4 (140-230)||(7132063-7132153)
chr4 (140-230)||(19020654-19020744)
chr4 (138-221)||(15013282-15013365)
chr4 (137-220)||(18276597-18276681)
chr4 (274-350)||(41165808-41165884)
chr4 (137-220)||(47535065-47535149)
chr4 (131-220)||(7964712-7964802)
chr4 (1-43)||(10644227-10644269)
chr4 (76-200)||(18238177-18238302)
chr4 (122-220)||(40904934-40905034)
chr4 (4-51)||(111406-111453)
chr4 (42-186)||(8374576-8374722)
chr4 (137-219)||(15044991-15045074)
chr4 (202-270)||(31132543-31132613)
chr4 (244-309)||(14901521-14901584)
chr4 (275-309)||(14952083-14952117)
chr4 (275-309)||(15135907-15135941)
chr4 (275-309)||(15272211-15272245)
chr4 (140-230)||(20000891-20000981)
chr4 (140-186)||(22738437-22738483)
chr4 (121-220)||(7185844-7185945)
chr4 (277-310)||(14996445-14996478)
chr4 (272-309)||(16327840-16327877)
chr4 (272-309)||(16609013-16609050)
chr4 (272-309)||(17145574-17145611)
chr4 (272-309)||(22351981-22352018)
chr4 (272-309)||(26339321-26339358)
chr4 (272-309)||(26680512-26680549)
chr4 (138-198)||(38764873-38764934)
chr4 (121-220)||(41256370-41256470)
chr4 (293-350)||(47534933-47534990)
chr4 (277-309)||(7131982-7132014)
chr4 (137-196)||(15109373-15109433)
chr4 (277-309)||(15287162-15287194)
chr4 (277-309)||(15294271-15294303)
chr4 (277-309)||(20001030-20001062)
[»] scaffold0302 (2 HSPs)
scaffold0302 (38-309)||(12179-12450)
scaffold0302 (1-34)||(12123-12156)
[»] scaffold0008 (4 HSPs)
scaffold0008 (39-309)||(128095-128366)
scaffold0008 (38-224)||(31675-31864)
scaffold0008 (1-43)||(31878-31920)
scaffold0008 (4-40)||(128384-128420)
[»] scaffold0498 (2 HSPs)
scaffold0498 (39-309)||(8943-9215)
scaffold0498 (4-40)||(8889-8925)
[»] scaffold0106 (1 HSPs)
scaffold0106 (39-309)||(41794-42066)
[»] chr6 (51 HSPs)
chr6 (39-308)||(14626045-14626316)
chr6 (39-309)||(23153512-23153786)
chr6 (40-236)||(1657748-1657944)
chr6 (76-236)||(35009439-35009599)
chr6 (40-224)||(1650105-1650290)
chr6 (51-236)||(15862549-15862734)
chr6 (38-224)||(25175627-25175815)
chr6 (38-224)||(27653983-27654171)
chr6 (1-236)||(29665900-29666137)
chr6 (38-224)||(16825752-16825942)
chr6 (275-357)||(19983144-19983226)
chr6 (275-357)||(35015009-35015091)
chr6 (151-236)||(27751603-27751688)
chr6 (275-357)||(18583638-18583720)
chr6 (137-220)||(18629608-18629692)
chr6 (140-230)||(1556173-1556263)
chr6 (140-230)||(16232060-16232150)
chr6 (121-218)||(17083200-17083298)
chr6 (43-112)||(27740907-27740977)
chr6 (138-220)||(29605614-29605696)
chr6 (137-220)||(16887792-16887876)
chr6 (1-43)||(16825956-16825998)
chr6 (137-226)||(17557012-17557101)
chr6 (140-230)||(18086821-18086911)
chr6 (1-43)||(25175571-25175613)
chr6 (1-43)||(27654185-27654227)
chr6 (137-220)||(35136013-35136096)
chr6 (140-230)||(13620792-13620882)
chr6 (140-230)||(22225736-22225826)
chr6 (140-230)||(23977937-23978027)
chr6 (293-350)||(21623506-21623563)
chr6 (241-309)||(23148266-23148335)
chr6 (137-220)||(22361765-22361849)
chr6 (137-220)||(33324856-33324939)
chr6 (137-219)||(18381684-18381767)
chr6 (140-230)||(10488867-10488957)
chr6 (140-230)||(16376371-16376461)
chr6 (140-230)||(16383695-16383785)
chr6 (275-309)||(18002395-18002429)
chr6 (140-230)||(19610186-19610276)
chr6 (275-309)||(23995245-23995279)
chr6 (275-309)||(26090057-26090091)
chr6 (277-310)||(1650020-1650053)
chr6 (275-308)||(4991394-4991427)
chr6 (137-221)||(15079709-15079792)
chr6 (293-350)||(22361619-22361676)
chr6 (137-197)||(25651400-25651461)
chr6 (277-309)||(16232199-16232231)
chr6 (277-309)||(19610325-19610357)
chr6 (146-230)||(22251564-22251648)
chr6 (137-220)||(33538370-33538453)
[»] scaffold0195 (2 HSPs)
scaffold0195 (40-306)||(19272-19543)
scaffold0195 (40-236)||(21356-21553)
[»] scaffold0012 (2 HSPs)
scaffold0012 (38-309)||(247366-247641)
scaffold0012 (140-230)||(34156-34246)
[»] scaffold0001 (2 HSPs)
scaffold0001 (39-309)||(171970-172242)
scaffold0001 (39-309)||(177673-177945)
[»] scaffold0162 (4 HSPs)
scaffold0162 (39-309)||(26340-26613)
scaffold0162 (76-236)||(8180-8340)
scaffold0162 (137-220)||(7025-7109)
scaffold0162 (293-350)||(6877-6934)
[»] scaffold0218 (2 HSPs)
scaffold0218 (39-299)||(4996-5259)
scaffold0218 (4-40)||(5277-5313)
[»] scaffold0025 (5 HSPs)
scaffold0025 (39-262)||(148786-149012)
scaffold0025 (40-235)||(8915-9111)
scaffold0025 (210-309)||(146838-146938)
scaffold0025 (121-220)||(85679-85779)
scaffold0025 (137-200)||(53509-53573)
[»] scaffold0049 (3 HSPs)
scaffold0049 (40-233)||(48253-48447)
scaffold0049 (278-357)||(20493-20572)
scaffold0049 (1-40)||(48195-48234)
[»] scaffold0011 (1 HSPs)
scaffold0011 (39-309)||(123087-123362)
[»] scaffold0077 (2 HSPs)
scaffold0077 (39-310)||(36836-37111)
scaffold0077 (278-357)||(15319-15398)
[»] scaffold0026 (4 HSPs)
scaffold0026 (39-230)||(107812-108004)
scaffold0026 (38-220)||(64527-64716)
scaffold0026 (170-221)||(89863-89915)
scaffold0026 (1-40)||(107755-107794)
[»] scaffold0009 (1 HSPs)
scaffold0009 (40-309)||(272091-272362)
[»] scaffold0018 (1 HSPs)
scaffold0018 (90-307)||(51110-51328)
[»] scaffold0132 (2 HSPs)
scaffold0132 (76-236)||(13609-13769)
scaffold0132 (275-357)||(42675-42754)
[»] scaffold0125 (1 HSPs)
scaffold0125 (76-236)||(41751-41911)
[»] scaffold1542 (1 HSPs)
scaffold1542 (39-236)||(534-732)
[»] scaffold0028 (4 HSPs)
scaffold0028 (76-309)||(89378-89614)
scaffold0028 (185-309)||(107708-107835)
scaffold0028 (139-220)||(79704-79786)
scaffold0028 (275-308)||(130878-130911)
[»] scaffold0215 (2 HSPs)
scaffold0215 (39-220)||(9353-9535)
scaffold0215 (39-220)||(16251-16433)
[»] scaffold0075 (1 HSPs)
scaffold0075 (40-236)||(34460-34658)
[»] scaffold0529 (1 HSPs)
scaffold0529 (40-230)||(3028-3220)
[»] scaffold0022 (1 HSPs)
scaffold0022 (38-230)||(5210-5403)
[»] scaffold0420 (1 HSPs)
scaffold0420 (70-224)||(13325-13479)
[»] scaffold0772 (1 HSPs)
scaffold0772 (38-232)||(5592-5788)
[»] scaffold0139 (4 HSPs)
scaffold0139 (38-308)||(21031-21303)
scaffold0139 (38-308)||(13977-14248)
scaffold0139 (1-49)||(14256-14304)
scaffold0139 (1-49)||(21311-21359)
[»] scaffold0369 (1 HSPs)
scaffold0369 (38-230)||(3786-3980)
[»] scaffold0116 (2 HSPs)
scaffold0116 (38-220)||(99-283)
scaffold0116 (275-357)||(30415-30497)
[»] scaffold0076 (3 HSPs)
scaffold0076 (38-220)||(43061-43245)
scaffold0076 (1-43)||(43005-43047)
scaffold0076 (140-230)||(39271-39361)
[»] scaffold1711 (1 HSPs)
scaffold1711 (89-224)||(1304-1439)
[»] scaffold0361 (1 HSPs)
scaffold0361 (4-236)||(3219-3453)
[»] scaffold0141 (4 HSPs)
scaffold0141 (104-236)||(26926-27058)
scaffold0141 (104-232)||(22671-22799)
scaffold0141 (272-309)||(22852-22889)
scaffold0141 (273-309)||(27108-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (104-236)||(1582-1714)
scaffold0124 (272-309)||(1496-1533)
[»] scaffold0078 (3 HSPs)
scaffold0078 (104-236)||(37066-37198)
scaffold0078 (275-357)||(41630-41712)
scaffold0078 (272-309)||(36980-37017)
[»] scaffold0084 (1 HSPs)
scaffold0084 (76-233)||(56102-56260)
[»] scaffold0184 (1 HSPs)
scaffold0184 (275-357)||(31132-31214)
[»] scaffold0016 (3 HSPs)
scaffold0016 (277-357)||(166116-166196)
scaffold0016 (277-351)||(162036-162110)
scaffold0016 (274-350)||(116410-116486)
[»] scaffold0686 (2 HSPs)
scaffold0686 (277-351)||(5735-5809)
scaffold0686 (277-351)||(5941-6015)
[»] scaffold0034 (1 HSPs)
scaffold0034 (275-357)||(80185-80267)
[»] scaffold0066 (2 HSPs)
scaffold0066 (42-232)||(45098-45290)
scaffold0066 (42-232)||(54484-54676)
[»] scaffold0342 (1 HSPs)
scaffold0342 (277-357)||(304-384)
[»] scaffold1164 (1 HSPs)
scaffold1164 (278-357)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (278-357)||(19802-19881)
scaffold0122 (278-357)||(24106-24185)
[»] scaffold0467 (1 HSPs)
scaffold0467 (140-232)||(10335-10427)
[»] scaffold0123 (1 HSPs)
scaffold0123 (137-220)||(8173-8257)
[»] scaffold0876 (1 HSPs)
scaffold0876 (278-348)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (278-352)||(6261-6335)
scaffold0310 (278-315)||(4-41)
[»] scaffold1560 (1 HSPs)
scaffold1560 (1-51)||(57-107)
[»] scaffold0104 (1 HSPs)
scaffold0104 (1-51)||(48522-48572)
[»] scaffold0409 (2 HSPs)
scaffold0409 (121-220)||(1348-1449)
scaffold0409 (121-220)||(9603-9704)
[»] scaffold0017 (1 HSPs)
scaffold0017 (137-230)||(54039-54132)
[»] scaffold0700 (1 HSPs)
scaffold0700 (137-220)||(2688-2772)
[»] scaffold0151 (1 HSPs)
scaffold0151 (137-220)||(22422-22506)
[»] scaffold0138 (1 HSPs)
scaffold0138 (137-220)||(22429-22513)
[»] scaffold0892 (1 HSPs)
scaffold0892 (137-230)||(3578-3671)
[»] scaffold0761 (1 HSPs)
scaffold0761 (140-309)||(1492-1663)
[»] scaffold0053 (2 HSPs)
scaffold0053 (137-220)||(76847-76931)
scaffold0053 (293-350)||(76699-76756)
[»] scaffold0032 (5 HSPs)
scaffold0032 (137-220)||(104623-104707)
scaffold0032 (275-350)||(104477-104552)
scaffold0032 (275-309)||(55902-55936)
scaffold0032 (275-309)||(108075-108109)
scaffold0032 (137-220)||(93773-93857)
[»] scaffold0507 (1 HSPs)
scaffold0507 (275-350)||(1363-1438)
[»] scaffold0483 (1 HSPs)
scaffold0483 (137-219)||(6824-6907)
[»] scaffold0456 (2 HSPs)
scaffold0456 (150-220)||(1546-1617)
scaffold0456 (150-220)||(8691-8762)
[»] scaffold1500 (2 HSPs)
scaffold1500 (140-230)||(1512-1602)
scaffold1500 (277-309)||(1431-1463)
[»] scaffold0389 (1 HSPs)
scaffold0389 (166-219)||(10854-10908)
[»] scaffold0150 (1 HSPs)
scaffold0150 (137-218)||(28699-28781)
[»] scaffold0107 (2 HSPs)
scaffold0107 (140-230)||(39814-39904)
scaffold0107 (140-230)||(31477-31567)
[»] scaffold0039 (1 HSPs)
scaffold0039 (275-309)||(12418-12452)
[»] scaffold0010 (1 HSPs)
scaffold0010 (138-219)||(31184-31266)
[»] scaffold0387 (1 HSPs)
scaffold0387 (121-220)||(962-1063)
[»] scaffold0165 (1 HSPs)
scaffold0165 (121-220)||(30110-30211)
[»] scaffold0013 (1 HSPs)
scaffold0013 (293-350)||(35816-35873)
[»] scaffold0193 (1 HSPs)
scaffold0193 (121-199)||(4751-4831)
[»] scaffold0058 (2 HSPs)
scaffold0058 (137-220)||(70307-70390)
scaffold0058 (275-309)||(57392-57426)
[»] scaffold1666 (1 HSPs)
scaffold1666 (140-223)||(1-84)
[»] scaffold0622 (1 HSPs)
scaffold0622 (4-51)||(9393-9440)
[»] scaffold0243 (1 HSPs)
scaffold0243 (137-219)||(2317-2400)
[»] scaffold0004 (2 HSPs)
scaffold0004 (275-310)||(193396-193431)
scaffold0004 (121-200)||(27643-27724)
[»] scaffold0706 (1 HSPs)
scaffold0706 (275-309)||(6443-6477)
[»] scaffold0597 (1 HSPs)
scaffold0597 (275-309)||(878-912)
[»] scaffold0465 (1 HSPs)
scaffold0465 (275-309)||(9882-9916)
[»] scaffold0383 (2 HSPs)
scaffold0383 (140-230)||(2560-2650)
scaffold0383 (277-309)||(2700-2732)
[»] scaffold0251 (1 HSPs)
scaffold0251 (275-309)||(13285-13319)
[»] scaffold0031 (1 HSPs)
scaffold0031 (137-218)||(97200-97282)
[»] scaffold1295 (1 HSPs)
scaffold1295 (293-350)||(442-499)
[»] scaffold0598 (1 HSPs)
scaffold0598 (121-200)||(3397-3478)
[»] scaffold0516 (1 HSPs)
scaffold0516 (272-309)||(12044-12081)
[»] scaffold0183 (1 HSPs)
scaffold0183 (272-309)||(6899-6936)
[»] scaffold0080 (1 HSPs)
scaffold0080 (137-213)||(43805-43882)
[»] scaffold1272 (1 HSPs)
scaffold1272 (137-196)||(457-517)
[»] scaffold0670 (1 HSPs)
scaffold0670 (76-200)||(7695-7820)


Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 40 - 360
Target Start/End: Original strand, 41394288 - 41394610
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||||||| ||||||||||| |||||  || ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  41394288 ataacatcaattgagcaagaatcaaatctcaacataacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatattt 41394387  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataa 238  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||| ||||||||    
T  41394388 gaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataa 41394487  T
Q  239 tcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttc 337  Q
    ||||||||||||||| |||||||||||| | || |||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41394488 tcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttc 41394587  T
Q  338 actttagctcctatgcttctcca 360  Q
    ||||||||||||||| |||||||    
T  41394588 actttagctcctatgattctcca 41394610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 20931410 - 20931682
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||| ||||||||||| | |||||||||||||||||||      
T  20931410 cataacatcaattgaacaagaatcaaatctcaaattaacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatata 20931509  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  20931510 tgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccata 20931609  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    | |||| ||||||||| | |||||||||||| || |||  ||||||||||||||  |||||||||||||||||    
T  20931610 agcaaacttcatacaacaattgaaaatttgcaaaatgaggatgattatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 20913102 - 20913367
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||||||||||||||||||||      ||| ||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||  |    
T  20913102 cataacatcaattgaacaagaatcaaa------ttaacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatat 20913195  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataa 238  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||    
T  20913196 gaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccgtaa 20913295  T
Q  239 tcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
     |||||||||||||| | |||||||||||| || |||  ||||||| |||||| ||||||||||||||||||    
T  20913296 gcaaaattcatacaacaattgaaaatttgcaaaatgaggatgattacgataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 38 - 309
Target Start/End: Complemental strand, 20893825 - 20893551
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataa 136  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| | | ||     
T  20893825 tcataacatcaattgaacaagaatcataaatcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctat 20893726  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  20893725 ttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcaagaatttagcaacaattatccat 20893626  T
Q  237 aat--caaaattcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
     ||   ||||||||||||| |||||||||||   || |||  ||||||||||| || ||||||||||||||||||    
T  20893625 tatgcaaaaattcatacaacatttgaaaattacaaaatgatgatgattatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 20445744 - 20446019
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||| ||||||||| | | ||||| | |||||||||||||||||||||||||||||||||||||| || ||||||||||| | | || |    
T  20445744 cataacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctact 20445843  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||     
T  20445844 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccatt 20445943  T
Q  238 at--caaaattcatacaatatttgaaaattt--gcaagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||   ||||||||||||| ||||||||||||    || |||  |||||||||||||| |||||| |||||||||||    
T  20445944 atgcaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 4 - 310
Target Start/End: Original strand, 45051453 - 45051759
Alignment:
Q  4 catgaatatgcataaccaagcaattattcatcaatcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattg 102  Q
    |||||||||||||| ||||||| | |||||||||  |||||||||||||| ||||||||||| ||||| ||| | | |||||||||||||||||||||||    
T  45051453 catgaatatgcatacccaagcagtgattcatcaacaataacatcaattgagcaagaatcaaatctcaaattaaccataacttagcaaaattcaccaattg 45051552  T
Q  103 agcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataa 202  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |    
T  45051553 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatca 45051652  T
Q  203 cagttagagcacgaatttagcaacaattatccat-aatcaaaattcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaaccccc 301  Q
    |||| ||| ||||||| |||||  |||| | ||| || | |  ||||||||| ||  ||||||  ||||    | |||||||||||||| ||||||||||    
T  45051653 cagtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaat--gcaaaatcacatgattatgataaagactaaccccc 45051750  T
Q  302 ttaccttaa 310  Q
    |||||||||    
T  45051751 ttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 37844649 - 37844374
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaactt-atcatttttacataa 136  Q
    ||||||||||||||||||||||||| | |||||| || ||||||||||||||||||||  |||||||||||||||| || | || ||||||| | | ||     
T  37844649 cataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctac 37844550  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||||||||||||||||    
T  37844549 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccat 37844450  T
Q  237 aat--caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
     ||   ||||||||||||| |||||||||||  | || |||  |||||||||||||| ||||||||||||||||||    
T  37844449 tatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 20531509 - 20531783
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||| ||||||||| | | ||||| | |||||||||||||||||||||||||||||||||||||| || ||||||||||| | | || |    
T  20531509 cataacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctact 20531608  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| || ||||||||||||||||||||||||||||     
T  20531609 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccatt 20531708  T
Q  238 at--caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||   ||||||||||||| |||||||||||  | || |||  |||||||||||||| |||||   ||||||||||    
T  20531709 atgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 39 - 224
Target Start/End: Original strand, 2116319 - 2116506
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacc-tcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataa 136  Q
    ||||||||||||||| |||||||||||   |||| ||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||     
T  2116319 cataacatcaattgagcaagaatcaaaatatcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatat 2116418  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | ||||||||| |||||    
T  2116419 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaaaagcacgaatctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 38 - 230
Target Start/End: Original strand, 22227873 - 22228066
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataa 136  Q
    |||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||||  ||||||||| | |||||||||||||||||||     
T  22227873 tcataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatat 22227972  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||| ||||    
T  22227973 ttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaatt 22228066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 38 - 230
Target Start/End: Original strand, 22232570 - 22232763
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataa 136  Q
    |||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||||  ||||||||| | |||||||||||||||||||     
T  22232570 tcataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatat 22232669  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||| ||||    
T  22232670 ttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaatt 22232763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 5072576 - 5072388
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| ||| ||||||||||| | |||||||||||||||||||||| || | |||||||||||||| ||||    
T  5072576 tcataacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcata 5072477  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||| ||| ||||  |||||||||||||||||    
T  5072476 tatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcacagcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 18601306 - 18601118
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| ||| ||||||||||| | |||||||||||||||||||||| || | |||||||||||||| ||||    
T  18601306 tcataacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcata 18601207  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||  |||||| ||||||||||    
T  18601206 tatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 51452623 - 51452755
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  51452623 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 51452722  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    ||||  |||||||||||||||||||||||||||    
T  51452723 agttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 21860332 - 21860414
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  21860332 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 275 - 351
Target Start/End: Complemental strand, 44034905 - 44034829
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctat 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44034905 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 41218726 - 41218808
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  41218726 aaatgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 27675086 - 27675191
Alignment:
Q  244 attcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttta 343  Q
    |||||||||| | |||||||||| ||  | |||| ||||||||||||  |||||||||||||||||||||||||||| |  |||| | ||||||||||||    
T  27675086 attcatacaacaattgaaaatttacac-taaaaacgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttta 27675184  T
Q  344 gctccta 350  Q
    |||||||    
T  27675185 gctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22227817 - 22227867
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataacatcaatt 51  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22227817 atccatgaatatgcaaacccaagcaattattcatcaatcataacatcaatt 22227867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22232514 - 22232564
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataacatcaatt 51  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22232514 atccatgaatatgcaaacccaagcaattattcatcaatcataacatcaatt 22232564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 22143445 - 22143361
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| || |||||||||||  || |||||||||  |||| |||||||||||||| ||||| | |||||||||||||||||    
T  22143445 ttgaacatgcaaattcaccaacaacaattcaattatcacaaatttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 17609091 - 17609174
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||| ||||||| | | ||||||||||||||    
T  17609091 ttgaacatgcaatttcaccaacaacaatccaattatcaccaatttcatgcattcaaatatatcatcataattagagcacgaatt 17609174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 17148735 - 17148825
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||| ||||||    
T  17148735 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaatt 17148825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 18059846 - 18059756
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  18059846 aacatgtaatttcacccataaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 18059756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 309
Target Start/End: Original strand, 46523557 - 46523727
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat-aa 238  Q
    |||||||||||||||| |||| ||||  || | |||||||||||||| |  || ||| ||| |||   ||||||||||||||||||||||| | ||| ||    
T  46523557 aacatgtaatttcacccacaaacataacataaacatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaa 46523656  T
Q  239 tcaaaattcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
     | |  ||||||||| ||  ||||||    ||  ||| ||||||||||||| |||||||||||||||||||    
T  46523657 cccattttcatacaacatgagaaaatgcaaaatggaacatgattatgataataactaacccccttacctta 46523727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 21195160 - 21195261
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||  ||||||||||||||  || ||||||||| ||||| ||||||| |||||||||||  | | |||||||||||||    
T  21195160 tatcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcaccataattagagcacgaat 21195259  T
Q  219 tt 220  Q
    ||    
T  21195260 tt 21195261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 17004806 - 17004896
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  17004806 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 17004896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 38055179 - 38055089
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||| | |||||||||||| ||||||||    
T  38055179 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaataacatcacagtaaaagcacgaatttaacaacaatt 38055089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 7640888 - 7640851
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  7640888 tgaaattgattatgataataactaacccccttacctta 7640851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 13376768 - 13376711
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| |  |||| | | |||||||||||||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 308
Target Start/End: Complemental strand, 15861360 - 15861327
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctt 308  Q
    |||||||||||||||| |||||||||||||||||    
T  15861360 aaatgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 20177513 - 20177570
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    |||||||| |||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctccta 20177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 22035749 - 22035786
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  22035749 tgaaattgattatgataataactaacccccttacctta 22035786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 37233944 - 37233880
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcat 200  Q
    ||||||||| ||||| ||||||||  || ||||||||| ||||| ||||||| ||||||||||||    
T  37233944 ttgaacatgcaattttaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcat 37233880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 6261 - 5990
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  6261 cataacatcacttgaacaagaatcaaatctcaattaacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatattt 6162  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataa 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  6161 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataa 6062  T
Q  239 tcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||| ||||||||||| |||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  6061 tcacaattcatacaacatttgagaatttgcaaagtgaaaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6318 - 6274
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataaca 45  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  6318 atccatgaatatgcatacccaagcaattattcatcaatcataaca 6274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 211; Significance: 1e-115; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 39 - 357
Target Start/End: Complemental strand, 20627511 - 20627190
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||| ||||||||||||||||| ||| ||||| ||| |||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  20627511 cataaaatcaattgaacaagaattaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatt 20627412  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| |||||||||||||||    
T  20627411 tggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccata 20627312  T
Q  238 atcaaaattcatacaatatttgaaaattt--gcaagtgaaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagct 335  Q
    |||| ||||||||||||||||||||||||    || |||  |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  20627311 atcataattcatacaatatttgaaaattttacaaaatgatgatgattatgataaagactaaccccgttaccttaattatctccaactattagctctagct 20627212  T
Q  336 tcactttagctcctatgcttct 357  Q
    ||||||| ||||||||| ||||    
T  20627211 tcacttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 462803 - 463075
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |    
T  462803 cataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatt 462902  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  462903 tgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccata 463002  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    | |||||||||||||| |||||||||||| | || |||  |||||||||||||| ||||||||||||||||||    
T  463003 agcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 40 - 357
Target Start/End: Complemental strand, 19794901 - 19794581
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||||||||||||||||| | ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||| | | || ||    
T  19794901 ataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctattt 19794802  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataa 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||| | |||||||||||| |    
T  19794801 gaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccatta 19794702  T
Q  239 t--caaaattcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagctt 336  Q
    |   ||||||||||||| |||||||| ||   || | |  ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  19794701 tgcaaaaattcatacaacatttgaaatttacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagctt 19794602  T
Q  337 cactttagctcctatgcttct 357  Q
    |||||| |||| |||| ||||    
T  19794601 cacttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 44 - 357
Target Start/End: Complemental strand, 43643150 - 43642833
Alignment:
Q  44 catcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaac 142  Q
    |||||||||||||||||||| | ||||| |||  ||||||| || |||||||||||||||||||||||||| |||||||| ||||| | | || ||||||    
T  43643150 catcaattgaacaagaatcatatctcaaattaataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaac 43643051  T
Q  143 atgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataat--c 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||||||||||||  ||       
T  43643050 atgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatccactatgca 43642951  T
Q  241 aaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcac 339  Q
    ||||||||||||| |||||||||||  | || |||  |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  43642950 aaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacctccttcccttaattatctccaactattagctctagcttcac 43642851  T
Q  340 tttagctcctatgcttct 357  Q
    ||| ||||||||| ||||    
T  43642850 ttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 40 - 309
Target Start/End: Complemental strand, 36982638 - 36982364
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    ||||||||||||||||| |||||| | ||||||| | ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  36982638 ataacatcaattgaacaggaatcataactcaattcaacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatattt 36982539  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataa 238  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||| |    
T  36982538 gaacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccatta 36982439  T
Q  239 t--caaaattcatacaatatttgaaaatttgc--aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |   ||||||||||||| |||||||||||| |  || |||  |||||||||||||| ||||||||||||||||||    
T  36982438 tgcaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 8891307 - 8891581
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| | | || |    
T  8891307 cataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatt 8891406  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||     
T  8891407 tgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccatt 8891506  T
Q  238 at--caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||   ||||||||||||| |||||||||||| | || |||  |||||||||||||| ||||||||| ||||||||    
T  8891507 atgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 40 - 309
Target Start/End: Complemental strand, 24341586 - 24341309
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    ||||||||||||||||| |||||| | ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  24341586 ataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataatt 24341487  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca--t 236  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |||||||||||||||||||||  |    
T  24341486 gaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaatt 24341387  T
Q  237 aatcaaaattcatacaatatttgaaaatttgcaa-----gtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |   ||||||||||| | ||||||||| ||||||      |||  ||||||||||| || ||||||||||||||||||    
T  24341386 atgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 25265550 - 25265390
Alignment:
Q  76 caacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 175  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25265550 caacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 25265451  T
Q  176 caattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  25265450 caattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 40 - 232
Target Start/End: Complemental strand, 7508041 - 7507848
Alignment:
Q  40 ataacatcaattgaa-caagaatcaaacctcaattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||||| || || |||||| | |||||||| |||||||||||| ||||||||||||||| ||||||||| | ||||||| ||||||||||| ||    
T  7508041 ataacatcaattaaaacatgaatcatatctcaattaacaacaacttagccaaattcaccaattgaacacaattttcataacttattatttttacatattt 7507942  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattat 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |  || ||| ||| |||   |||||||||||||||||| ||||||    
T  7507941 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaataattat 7507848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 236
Target Start/End: Complemental strand, 17396852 - 17396653
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| |||   ||||||||| | |||||||||||||||||||||| || | |||||||||||||||| ||    
T  17396852 tcataacatcatttgaacaagcatcacatctcaaattaatgacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttactta 17396753  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca 235  Q
     || |||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| | |||| |||||||||||||||||||||||||||    
T  17396752 tttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcacgaatttagcaacaattatcca 17396654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 19689533 - 19689401
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  19689533 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 19689434  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  19689433 agttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 19886849 - 19886661
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||| | ||||| ||| ||||||||||| | |||||||||| || |||||||| || | ||||||||| |||| ||||    
T  19886849 tcataacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcata 19886750  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  19886749 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 23820202 - 23820334
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  23820202 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 23820301  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  23820302 agttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 14906572 - 14906440
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  14906572 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 14906473  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  14906472 agttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 20015142 - 20015274
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| |  |||||||||||| ||||||||||| |||||||| |||||||||||||| |||||||||||| |     
T  20015142 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgcatgcaaacatatcatcaa 20015241  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  20015242 agttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 22275043 - 22275125
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  22275043 aaatgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 22284276 - 22284358
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  22284276 aaatgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 278 - 357
Target Start/End: Original strand, 15633538 - 15633617
Alignment:
Q  278 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  214 cgaatttagcaacaattatccataatc--aaaattcatacaatatttgaaaatttgcaag-tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||||||||||||| ||   ||||||||||||| | |||||||||| |||  |||  |||||||||||||| ||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 12728560 - 12728650
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  12728560 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 12728650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 34824643 - 34824733
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  34824643 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 34824733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 24884849 - 24884933
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||| ||||| ||||||| |||||||||||| | ||||||||||| |||||    
T  24884849 ttgaacatgcaatttcaccaacaacaattcaattatcaccaattccatgcattcaaacatatcatcatagttagagcacaaattt 24884933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 12635956 - 12635866
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||||||||||    
T  12635956 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaatt 12635866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19886905 - 19886863
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  19886905 atccatgaatatgcatacccaagcaattattcatcaatcataa 19886863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 23778133 - 23778043
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||| | |||| ||||| || ||||||||||||||||||  || ||| ||| ||||  |||||||||||||||||| ||||    
T  23778133 aacatgtaatttcatccacaaacataccataatcatcaattcatgcataagaaaatagcatcacagcaagagcacgaatttagcaagaatt 23778043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 19660044 - 19660124
Alignment:
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaa 217  Q
    |||||||| ||||||||||||||| || ||||||||| ||| |||||| |||| |||||||||| | | ||||||||||||    
T  19660044 tgaacatgcaatttcaccaacaataattcaattatcaccaatttcatgtatacgaacatatcatcataattagagcacgaa 19660124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 19669191 - 19669116
Alignment:
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagca 213  Q
    ||||||| ||||||||||||||  |  ||||||||||||||| |||||||||||||||||||  | ||||||||||    
T  19669191 gaacatgcaatttcaccaacaacaactcaattatcatcaatttcatgcatacaaacatatcaccatagttagagca 19669116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 3798691 - 3798601
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||| ||||||    
T  3798691 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaatt 3798601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 8944014 - 8944104
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| ||||  |||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||||||||||    
T  8944014 aacatgtaatttcacccacaaatataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaatt 8944104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 42178057 - 42177967
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||||||||||    
T  42178057 aacatgtaatttcacccaaaaacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaatt 42177967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 19666691 - 19666775
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| || |||||||| ||  || ||||||||| ||||| ||||||| |||||||||||| | |||||||||| ||||||    
T  19666691 ttgaacatgcaaattcaccaaaaacaattcaattatcaccaatttcatgcattcaaacatatcattatagttagagcatgaattt 19666775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 43646059 - 43646139
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    |||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||  | | ||||||||||||||    
T  43646059 aacatgaaatttcaccaacaacaatccaattatcaacaacttcatgcattcaaacatatcaacataattagagcacgaatt 43646139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 68155 - 68238
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||| ||| | | || |||||||||||    
T  68155 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 68238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 9652830 - 9652796
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  9652830 aaatgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 11231426 - 11231336
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  11231426 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 11231336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 12641730 - 12641640
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||| | |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||| ||||||    
T  12641730 aacatgtaatttcagccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaatt 12641640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 16935761 - 16935851
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||  |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||| ||||||| ||||||||    
T  16935761 aacatgtaatttcacgcacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaatt 16935851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 17006421 - 17006511
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||  |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||| ||||||| ||||||||    
T  17006421 aacatgtaatttcacgcacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaatt 17006511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 310
Target Start/End: Complemental strand, 19689352 - 19689314
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttaccttaa 310  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  19689352 tgaacatgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 22513273 - 22513183
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  22513273 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 22513183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 24685869 - 24685779
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  24685869 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 24685779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 28775895 - 28775805
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  28775895 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 28775805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 9636891 - 9636972
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcat 200  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| |||||| || ||||||||||||    
T  9636891 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcat 9636972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 14906391 - 14906354
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  14906391 tgaacatgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 23820383 - 23820420
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  23820383 tgaacatgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 308
Target Start/End: Original strand, 25213370 - 25213403
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctt 308  Q
    |||||||||||||||| |||||||||||||||||    
T  25213370 aaatgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 25305769 - 25305826
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactccta 25305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 3798552 - 3798520
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  3798552 atgattatgataataactaacccccttacctta 3798520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 8944153 - 8944185
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  8944153 atgattatgataataactaacccccttacctta 8944185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 12635817 - 12635785
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  12635817 atgattatgataataactaacccccttacctta 12635785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 12641591 - 12641559
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  12641591 atgattatgataataactaacccccttacctta 12641559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 12728699 - 12728731
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  12728699 atgattatgataataactaacccccttacctta 12728731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 16935900 - 16935932
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  16935900 atgattatgataataactaacccccttacctta 16935932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 17006560 - 17006592
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  17006560 atgattatgataataactaacccccttacctta 17006592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 19660221 - 19660273
Alignment:
Q  298 ccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    |||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19794959 - 19794923
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaa 37  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  19794959 atccatgaatatgcatacccaagcaatgattcatcaa 19794923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 42177918 - 42177886
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  42177918 atgattatgataataactaacccccttacctta 42177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 200; Significance: 1e-109; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 1153 - 882
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||| |||||||||||| ||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||    
T  1153 cataacatcacttgaacaagaataaaatctcaattaacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatattt 1054  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataa 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  1053 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataa 954  T
Q  239 tcaaaattcatacaatatttgaaaatttg-caagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||| ||||||||||| |||||| ||||||  ||||||| |||||||||||||| ||||||||||||||||||    
T  953 tcacaattcatacaacatttgagaatttgtaaagtgaagatgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1210 - 1165
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataacat 46  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  1210 atccatgaatatgcatacccaagcaattattcatcaatcataacat 1165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 40 - 357
Target Start/End: Complemental strand, 16405169 - 16404852
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattg 139  Q
    |||||||||||||||||||||||| |  ||||||   ||||||||||||||||||||||||||||||||||||| |||||||| ||||| | | || |||    
T  16405169 ataacatcaattgaacaagaatcatatgtcaattt--aacaacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttg 16405072  T
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||| ||    
T  16405071 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcat 16404972  T
Q  240 --caaaattcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttc 337  Q
       ||||||||||||| |||||||||||| ||| | |  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  16404971 gcaaaaattcatacaacatttgaaaatttacaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttc 16404872  T
Q  338 actttagctcctatgcttct 357  Q
    ||||| ||||||||| ||||    
T  16404871 acttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 16193914 - 16193643
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  16193914 cataacatcaattgaacaagaatcaaatctcaaattaacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatt 16193815  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||| |||||||    
T  16193814 tgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccata 16193715  T
Q  238 atcaaaattcatacaatatttgaaaattt-gcaagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    | |||||||||||||||||||||||||||  ||| |||  |||||||||||||| ||||| ||||||||||||    
T  16193714 agcaaaattcatacaatatttgaaaatttaccaaatgatgatgattatgataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 43373666 - 43373392
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    |||| |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  43373666 catagcatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatt 43373567  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||  ||||||||||     
T  43373566 tgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaattatccatt 43373467  T
Q  238 at--caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||   ||||||||||||| |||||||| ||  | || |||  |||||||||||||| ||||||||||||||||||    
T  43373466 atacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 78 - 309
Target Start/End: Complemental strand, 24928949 - 24928716
Alignment:
Q  78 acaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatca 177  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||| | | || |||||||||||||||||||||||||||||||||||||||||    
T  24928949 acaacttagcgaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatca 24928850  T
Q  178 attcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataatcaaaattcatacaatatttgaaaattt--gcaagtgaa 275  Q
    |||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    || |||     
T  24928849 attcatgcatacaaacatataatcacagttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgac 24928750  T
Q  276 aatgattatgataaaaactaacccccttacctta 309  Q
     |||||||||||||| ||||||||| ||||||||    
T  24928749 gatgattatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 40 - 224
Target Start/End: Complemental strand, 6774443 - 6774258
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||||||| ||||||||||| ||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  6774443 ataacatcaattgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatattt 6774344  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||    
T  6774343 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 39 - 224
Target Start/End: Original strand, 24549047 - 24549233
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||| ||||||||||| | ||| ||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |    
T  24549047 cataacatcaattgagcaagaatcaaatcccaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatt 24549146  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||    
T  24549147 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 40 - 236
Target Start/End: Original strand, 17345636 - 17345832
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattg 139  Q
    |||| ||||| ||||||||||||| | |||||||  ||| ||||||||||||| || ||||||||||||||||| | |||||  ||||||||||||||||    
T  17345636 ataatatcaactgaacaagaatcataactcaattcacaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattg 17345735  T
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  17345736 aacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcacagttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 38 - 220
Target Start/End: Complemental strand, 21844760 - 21844576
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||| ||||| | ||||| ||| ||||||||||| | |||||||||||||||||||||| || | |||||||||||||||||||    
T  21844760 tcataacatcatttgaacaaaaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacata 21844661  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
     || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||  |||||||||||||    
T  21844660 tttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 38 - 220
Target Start/End: Complemental strand, 21852153 - 21851969
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||| | ||||| ||| ||||||||||| | |||||||||||||||||||||| || | |||||||||||||||||||    
T  21852153 tcataacatcatttgaacaagaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacata 21852054  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
     || ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||  |||||||||||||    
T  21852053 tttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 30120786 - 30120974
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||||||||||| |||||| | ||||| ||| ||||||||||| | |||||||||||||||||||||| || | |||||||||||||| ||||    
T  30120786 tcataacatcaattgaacatgaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcata 30120885  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      ||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  30120886 tatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 5238218 - 5238350
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  5238218 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 5238317  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  5238318 agttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 16674580 - 16674392
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| ||| ||||||||||| | ||||||||||||| |||||||| || | |||||||||||||| ||||    
T  16674580 tcataacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattaagcacaatattcataacttatcatttttgcata 16674481  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      ||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||||| ||| ||||  |||||||||||||||||    
T  16674480 tatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcacagaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 22907346 - 22907214
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  22907346 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 22907247  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  22907246 agttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 24661380 - 24661248
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  24661380 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 24661281  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  24661280 agttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 43685677 - 43685809
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  43685677 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 43685776  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  43685777 agttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 274764 - 274846
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  274764 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 641085 - 641003
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  641085 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 826891 - 826809
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  826891 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 24716796 - 24716714
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  24716796 aaatgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatgattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 161
Target Start/End: Complemental strand, 222879 - 222754
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||| | ||||| ||| ||||||||||| | ||||||||||||| |||||||| || | |||||||||||||| ||||    
T  222879 tcataacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcata 222780  T
Q  136 attgaacatgtaatttcaccaacaat 161  Q
      ||||||||||||||||||||||||    
T  222779 tatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 161
Target Start/End: Complemental strand, 736502 - 736377
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||| | ||||| ||| ||||||||||| | ||||||||||||| |||||||| || | |||||||||||||| ||||    
T  736502 tcataacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcata 736403  T
Q  136 attgaacatgtaatttcaccaacaat 161  Q
      ||||||||||||||||||||||||    
T  736402 tatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 161
Target Start/End: Complemental strand, 860397 - 860272
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||| | ||||| ||| ||||||||||| | ||||||||||||| |||||||| || | |||||||||||||| ||||    
T  860397 tcataacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcata 860298  T
Q  136 attgaacatgtaatttcaccaacaat 161  Q
      ||||||||||||||||||||||||    
T  860297 tatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 39115596 - 39115678
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||||| ||||||||| ||||||||||||||||  |||||||||||||| ||||||||||| ||||||||| ||||    
T  39115596 aaatgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatgattct 39115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 26011657 - 26011741
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||||||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||| | | |||||||||||||||    
T  26011657 ttgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 26011741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 22006346 - 22006256
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  22006346 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 22006256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 222935 - 222893
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  222935 atccatgaatatgcatacccaagcaattattcatcaatcataa 222893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 736558 - 736516
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  736558 atccatgaatatgcatacccaagcaattattcatcaatcataa 736516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 860453 - 860411
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  860453 atccatgaatatgcatacccaagcaattattcatcaatcataa 860411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 13721016 - 13720926
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||||||||||    
T  13721016 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaatt 13720926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 16195399 - 16195489
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  |||||| ||| ||||   ||| ||||||||||||||||||    
T  16195399 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaacatagcatcacagcacgagaacgaatttagcaacaatt 16195489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 31194281 - 31194217
Alignment:
Q  244 attcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||| | |||||||||||||  | |||||||||||||| |||||||||||||||||||||    
T  31194281 attcatacaacaattgaaaatttgcac-taaaaatgattatgatgaaaactaacccccttacctta 31194217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 15933461 - 15933545
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||| | | ||||||||| |||||    
T  15933461 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacaaattt 15933545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 21198236 - 21198152
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||  ||| ||||||||| |||||||||||| | | |||||||||||||||    
T  21198236 ttgaacatgaaatttcaccaacaacaattcaattatctacaacttcatgcattcaaacatatcatcataattagagcacgaattt 21198152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 23226156 - 23226076
Alignment:
Q  141 acatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||| || |||||||||||  |  ||||||||||||||| |||||||||||||||||||| | ||||||||||| |||||    
T  23226156 acatgcaaattcaccaacaacaactcaattatcatcaatttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 25296321 - 25296405
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| |||||||||||||   || |||||||||| |||| ||||||| |||||||||||| | |||||| ||||||||||    
T  25296321 ttgaacatgcaatttcaccaacagcaattcaattatcattaatttcatgcattcaaacatatcatcatagttagggcacgaattt 25296405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 25758341 - 25758425
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| |||||||||||||   || |||||||||| |||| ||||||| |||||||||||| | |||||| ||||||||||    
T  25758341 ttgaacatgcaatttcaccaacagcaattcaattatcattaatttcatgcattcaaacatatcatcatagttagggcacgaattt 25758425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 13662353 - 13662263
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||  ||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  13662353 aacatgtaatttcacccacaaacataccataatcatncattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 13662263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 24929043 - 24928996
Alignment:
Q  4 catgaatatgcataaccaagcaattattcatcaatcataacatcaatt 51  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  24929043 catgaatatgcatacccaagcaatgattcatcaatcacaacatcaatt 24928996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 691967 - 691909
Alignment:
Q  103 agcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaat 161  Q
    |||||||| || | |||||||||||||| ||||  ||||||||||||||||||||||||    
T  691967 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 16873139 - 16873049
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||| ||||||    
T  16873139 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaatt 16873049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 5854777 - 5854861
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    |||||||||  |||||||||||||  || ||||||||  ||||| ||||||| |||||||||||| | | |||||||||||||||    
T  5854777 ttgaacatgctatttcaccaacaacaattcaattatcgccaatttcatgcattcaaacatatcatcataattagagcacgaattt 5854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 350
Target Start/End: Complemental strand, 21198081 - 21198005
Alignment:
Q  274 aaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||| || ||  |||||||||||| |||||||||| |||| |  |||| | |||||||||||||||||||    
T  21198081 aaaatgattataatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 21198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 33172330 - 33172455
Alignment:
Q  76 caacaacttagcaaaattcaccaatt-gagcacaatttttacaacttatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatc 173  Q
    ||||||| ||||| |||||| ||||| ||||||||||   ||||  ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||    
T  33172330 caacaacatagcacaattcaacaattagagcacaattc--acaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatc 33172427  T
Q  174 atcaa-ttcatgcatacaaacatatcat 200  Q
    | ||| |||||| || ||||||||||||    
T  33172428 accaatttcatgtattcaaacatatcat 33172455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 17285367 - 17285450
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| |||||||||  ||||||||||| | | || |||||||||||    
T  17285367 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcatttaaacatatcatcataattggagcacgaatt 17285450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 271448 - 271358
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  271448 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 271358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 644472 - 644562
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  644472 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 644562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 830207 - 830297
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  830207 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 830297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 21844812 - 21844774
Alignment:
Q  5 atgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  21844812 atgaatatgcaaacccaagcaattattcatcaatcataa 21844774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 21852205 - 21852167
Alignment:
Q  5 atgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  21852205 atgaatatgcaaacccaagcaattattcatcaatcataa 21852167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 22088882 - 22088792
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  22088882 aacatgtaatttcacctataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 22088792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 24385686 - 24385652
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  24385686 aaatgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 41506743 - 41506709
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||||    
T  41506743 aaatgattatgatgaaaactaacccccttacctta 41506709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 5238399 - 5238436
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  5238399 tgaacatgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 17285543 - 17285600
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| |  || | | |||||||||||||||||||    
T  17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctccta 17285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 22907165 - 22907128
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  22907165 tgaacatgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 24661199 - 24661162
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  24661199 tgaacatgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 37653717 - 37653616
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||| ||||||| ||||||  || ||||||||| ||| |||||||||||||||| ||||  | | ||| |||||||||    
T  37653717 tatcattttcacatactatgaacatgcaatttcagcaacaacaattcaattatcaccaaattcatgcatacaaacacatcaccataattaaagcacgaat 37653618  T
Q  219 tt 220  Q
    ||    
T  37653617 tt 37653616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 43373720 - 43373687
Alignment:
Q  4 catgaatatgcataaccaagcaattattcatcaa 37  Q
    |||||||||||||| |||||||||||||||||||    
T  43373720 catgaatatgcatacccaagcaattattcatcaa 43373687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 43685858 - 43685895
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  43685858 tgaacatgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 13662214 - 13662182
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  13662214 atgattatgataataactaacccccttacctta 13662182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 13720877 - 13720845
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  13720877 atgattatgataataactaacccccttacctta 13720845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 16873000 - 16872968
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  16873000 atgattatgataataactaacccccttacctta 16872968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 18261616 - 18261471
Alignment:
Q  76 caacaacttagcaaaattcaccaatt-gagcacaatttttacaacttatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatc 173  Q
    ||||||| ||||| |||||| ||||| ||||||||||   ||||  ||||||||| ||||| | |||| ||| ||||||||||||||  || ||||||||    
T  18261616 caacaacatagcacaattcaacaattagagcacaattc--acaatatatcattttcacatactatgaagatgcaatttcaccaacaacaattcaattatc 18261519  T
Q  174 atcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    | ||| |||||| |  |||||||||||| | |  ||||||||||||||    
T  18261518 accaatttcatgtactcaaacatatcatcataactagagcacgaattt 18261471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 22742910 - 22742990
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatca 199  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||||||||  |||||||||||    
T  22742910 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcactcaaacatatca 22742990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 23837361 - 23837445
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| |||||||  |||||  || ||||||||| ||| |||||||||  ||||||||||| | | |||||||||||||||    
T  23837361 ttgaacatgaaatttcaataacaacaattcaattatcaacaacttcatgcatttaaacatatcatcataattagagcacgaattt 23837445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 197; Significance: 1e-107; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 3780 - 3508
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |    
T  3780 cataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatt 3681  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||    
T  3680 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatctata 3581  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||||||  ||||||||||| | || |||| |||||||||| ||| ||||||||||||||||||    
T  3580 atcaaaattcatacaacttttgaaaatttacaaaatgaagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 1189 - 1462
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  1189 cataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatt 1288  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| | |||| |||||||||||||||||||||||||||||    
T  1289 tgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaaagttggagcacgaatttagcaacaattatccata 1388  T
Q  238 atcaaaattcatacaatatttgaaaattt--gcaagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |  ||||||||||||| ||||||||||||    || |||  |||||||||||||| ||||||||||||||||||    
T  1389 agaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 14842759 - 14842487
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | |    
T  14842759 cataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatt 14842660  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  14842659 tgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccata 14842560  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| ||||||||||| |||||| ||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  14842559 atcacaattcatacaacatttgagaatttgcaaagtgaagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 39 - 246
Target Start/End: Complemental strand, 51158216 - 51158008
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  51158216 cataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatt 51158117  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  51158116 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccata 51158017  T
Q  238 atcaaaatt 246  Q
    | |||||||    
T  51158016 agcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 13838959 - 13839232
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||| | ||||||  | | |||||||||||||||||||||||||||||||||||| |||||||||||||| | | || |    
T  13838959 cataacatcaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatt 13839058  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  13839059 tgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcata 13839158  T
Q  238 atcaaaattcatacaatatttgaaaattt--gcaagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||    || |||  ||||||||||| || ||||||||||||||||||    
T  13839159 atcaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 2049875 - 2050147
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    |||| |||||||||||||| ||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |    
T  2049875 catagcatcaattgaacaaaaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatt 2049974  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||||    
T  2049975 tgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaattatccata 2050074  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    | ||||||| |||||| |||||||| ||  | || |||  |||||||||||||| ||||||||||||||||||    
T  2050075 agcaaaattgatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 12030345 - 12030073
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    |||| ||||||||||||||||||||||  |||| ||| ||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||| |    
T  12030345 catagcatcaattgaacaagaatcaaatatcaaattaacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatt 12030246  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  12030245 tgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccata 12030146  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    | ||||| |||||||| |||||||| ||  | || |||  |||||||||||||  | ||||||||||||||||    
T  12030145 agcaaaagtcatacaacatttgaaatttcacaaaatgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 39 - 262
Target Start/End: Complemental strand, 15859222 - 15858996
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||| |    
T  15859222 cataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatt 15859123  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||     
T  15859122 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccatt 15859023  T
Q  238 at--caaaattcatacaatatttgaaa 262  Q
    ||   ||||||||||||| | ||||||    
T  15859022 atgcaaaaattcatacaacaattgaaa 15858996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 104 - 360
Target Start/End: Complemental strand, 16744247 - 16743990
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||||||||| || || ||||||||| ||||||||||||||| |||| ||||||||||| ||||||||||||||| |     
T  16744247 gcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaa 16744148  T
Q  204 agttagagcacgaatttagcaacaattatccataatcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaaccccct 302  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||| | || |||  ||||||||| |||| ||||||| | |    
T  16744147 agttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtaaagactaacctcgt 16744048  T
Q  303 taccttaattatctccaactattagctctagcttcactttagctcctatgcttctcca 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16744047 taccttaattatctccaactattagctctagcttcactttagctcctatgattctcca 16743990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 39 - 230
Target Start/End: Complemental strand, 15936825 - 15936633
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | |    
T  15936825 cataacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatt 15936726  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  15936725 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaatt 15936633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 39 - 230
Target Start/End: Complemental strand, 15938667 - 15938475
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | |    
T  15938667 cataacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatt 15938568  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||||| |||||| |||||||    
T  15938567 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattacagttggagcacgtatttagtaacaatt 15938475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 39 - 310
Target Start/End: Original strand, 15614899 - 15615170
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||| ||||||||||| | ||| ||| ||| |||||||||||||||||||||||||||| || || ||||||||||||||||||||| |    
T  15614899 cataacatcaattgagcaagaatcaaatcccaaattaacaataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatt 15614998  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat- 236  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||  ||||| ||||||| ||| |||||  |||| | |||     
T  15614999 tgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatc 15615098  T
Q  237 aatcaaaattcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttaccttaa 310  Q
    || | |  ||||||||| ||  ||||||  ||||    | |||||||||||||| |||||||||||||||||||    
T  15615099 aacccattttcatacaacatgagaaaat--gcaaaattacatgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 40 - 236
Target Start/End: Complemental strand, 17912678 - 17912483
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||| |||||||| |||||| | ||||||| | | ||||| || |||| |||| |||||  |||||||||| | ||||| ||||||||||||| ||    
T  17912678 ataacatcgattgaacatgaatcatagctcaattcaactacaacatatcaaa-ttcatcaattttgcacaattttcataacttttcatttttacatattt 17912580  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||    
T  17912579 aaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca-agttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 171 - 357
Target Start/End: Original strand, 19231979 - 19232169
Alignment:
Q  171 atcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataatc--aaaattcatacaatatttgaaaatttgc 268  Q
    |||||||||||||| ||| ||||||||||| |||||| |||||||||||||||||||||||||||| ||   ||||||||||||| ||||||||||||      
T  19231979 atcatcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttca 19232078  T
Q  269 --aagtgaaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
      || |||  ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  19232079 caaaatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 55316283 - 55316471
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| ||| ||||||||||| | |||||||||||||||||||||| || | |||||||||||||| ||||    
T  55316283 tcataacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcata 55316382  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  55316383 tatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 236
Target Start/End: Complemental strand, 13975921 - 13975722
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| |||   ||||||||| | |||||||||||||||||||||| || | |||||||||||||||| ||    
T  13975921 tcataacatcatttgaacaagcatcacatctcaaattaatgacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttactta 13975822  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca 235  Q
     || ||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||| | |||| |||||||||||||||||||||||||||    
T  13975821 tttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcacgaatttagcaacaattatcca 13975723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 41270139 - 41270327
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| ||| ||||||||||| | |||||||||||||||||||||| || | |||||||||||||| ||||    
T  41270139 tcataacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcata 41270238  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      ||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  41270239 tatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 236
Target Start/End: Original strand, 45860869 - 45861068
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| |||   ||||||||| | |||||||||||||||||||||| || | |||||||||||||||| ||    
T  45860869 tcataacatcatttgaacaagcatcacatctcaaattaatgacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttactta 45860968  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca 235  Q
     || ||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||| | |||| |||||||||||||||||||||||||||    
T  45860969 tttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcacgaatttagcaacaattatcca 45861067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 38 - 236
Target Start/End: Complemental strand, 13955089 - 13954890
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| |||   ||||||||| | ||||||| |||||||||||||| || | |||| ||||||||||| ||    
T  13955089 tcataacatcatttgaacaagcatcacatctcaaattaatgacaacttaggagaaattcatcaattgagcacaatattcataactgatcatttttactta 13954990  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca 235  Q
     || ||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||| | |||| |||||||||||||||||||||||||||    
T  13954989 tttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcacgaatttagcaacaattatcca 13954891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 38 - 220
Target Start/End: Original strand, 16821203 - 16821387
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||||||||||| |||||| | ||||| | | ||||||||||| | ||||||||||||| ||||||||  | | | |||| ||||||||||||    
T  16821203 tcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacata 16821302  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||  |||||||| ||||    
T  16821303 tttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataacatcacagcaagagcacggattt 16821387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 2449370 - 2449238
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  2449370 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 2449271  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  2449270 agttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 3992871 - 3992953
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  3992871 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 55513191 - 55513273
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  55513191 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 2844512 - 2844594
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  2844512 aaatgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatgattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 137 - 309
Target Start/End: Complemental strand, 19260923 - 19260749
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatc-atcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca 235  Q
    ||||||||||||||  || |||||  || |||||||| || | ||||| |||  ||||||||||| | | ||||||||||||||||||||||||||||||    
T  19260923 ttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatatcatcataattagagcacgaatttagcaacaattatcca 19260824  T
Q  236 taatcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||  ||||||||||||| ||||||||| || | || |||  |||||||||||||| ||||||||||||||||||    
T  19260823 taaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgataaagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 54038058 - 54037976
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  54038058 aaatgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 15857195 - 15857120
Alignment:
Q  277 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 352  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15857195 atgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 7854303 - 7854385
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  7854303 aaatgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 76 - 233
Target Start/End: Complemental strand, 11986327 - 11986169
Alignment:
Q  76 caacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaa--catgtaatttcaccaacaatcatacaattatc 173  Q
    ||||||||||||||||||||| | |||||||||||||  | |||||  ||||  |||||| || ||  |||||||||||| | |||||||||||||||||    
T  11986327 caacaacttagcaaaattcactatttgagcacaatttc-ataacttgacattaatacatactttaaaacatgtaatttcaaccacaatcatacaattatc 11986229  T
Q  174 atcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatc 233  Q
    || || ||||||| || || ||| ||| |||||||||||||||||||| |||||||||||    
T  11986228 attaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaattatc 11986169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 17955918 - 17955832
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagct----ctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    ||||||||||||| ||||||||| ||||    
T  17955918 aaatgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatgattct 17955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 45581952 - 45582016
Alignment:
Q  275 aaatgattatgataaaaactaacccc-cttaccttaattatctccaactattagctctagcttca 338  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45581952 aaatgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 232
Target Start/End: Original strand, 54651560 - 54651717
Alignment:
Q  76 caacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattg--aacatgtaatttcaccaacaatcatacaattatc 173  Q
    ||||||| || |||||||||||||||||| | |||||  | |||||| ||||| |||||| ||   |||||| ||||||||  |||||||||||||||||    
T  54651560 caacaacatatcaaaattcaccaattgagtataatttc-ataacttaacatttatacatactttgcaacatgcaatttcactcacaatcatacaattatc 54651658  T
Q  174 atcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattat 232  Q
    ||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||||    
T  54651659 atcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattat 54651717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 12264880 - 12264790
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  12264880 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 12264790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 25058907 - 25058997
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  25058907 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 25058997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 49232604 - 49232694
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  49232604 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 49232694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 232
Target Start/End: Complemental strand, 12902178 - 12902086
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattat 232  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||| ||||||    
T  12902178 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaaaaattat 12902086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 47784850 - 47784767
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||| | | ||||||||||||||    
T  47784850 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataattagagcacgaatt 47784767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14842816 - 14842766
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataacatcaatt 51  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||||||||    
T  14842816 atccatgaatatgcaaacccaatcaattattcatcaatcataacatcaatt 14842766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 15468428 - 15468338
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| | ||  |||||||||||||||||||||||    
T  15468428 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcatagcaagagcacgaatttagcaacaatt 15468338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 18911161 - 18911251
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||||||||||    
T  18911161 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaatt 18911251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 22275377 - 22275467
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||  ||| ||||  |||||||||||||||||||||||    
T  22275377 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatggcatcacagcaagagcacgaatttagcaacaatt 22275467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 5228481 - 5228570
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaat 229  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |   | ||| ||| ||||  ||||||||||||||||||||||    
T  5228481 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaaggaaataacatcacagcaagagcacgaatttagcaacaat 5228570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 6228726 - 6228625
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||||||||||||||||||  || ||||||||| ||| |||||| || |||||||||||  | | |||||||||||||    
T  6228726 tatcattttcacatactatgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcaccataattagagcacgaat 6228627  T
Q  219 tt 220  Q
    ||    
T  6228626 tt 6228625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 3576523 - 3576439
Alignment:
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||| | | |||||| |||||||    
T  3576523 attgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataattagagtacgaatt 3576439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 14080672 - 14080756
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| || ||||| ||| |  || ||||||||||||||| |||||||||||||||||||| | |||| ||||||||||||    
T  14080672 ttgaacatgcaaattcactaaccacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 17191704 - 17191788
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || | ||||||| ||||| ||||||| |||||||||||| | | |||||||||||||||    
T  17191704 ttgaacatgaaatttcaccaacaacaattcgattatcaacaatttcatgcattcaaacatatcatcataattagagcacgaattt 17191788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 17204844 - 17204928
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || | ||||||| ||||| ||||||| |||||||||||| | | |||||||||||||||    
T  17204844 ttgaacatgaaatttcaccaacaacaattcgattatcaacaatttcatgcattcaaacatatcatcataattagagcacgaattt 17204928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 350
Target Start/End: Complemental strand, 38810944 - 38810868
Alignment:
Q  274 aaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    |||||||||||||| ||  ||||||||||||||||| ||||| |||| |  |||| | |||||||||||||||||||    
T  38810944 aaaatgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 4145914 - 4145835
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatca 199  Q
    ||||||||| ||||| | |||||||||||||||| ||||||  || ||||||||| ||||||||| || |||||||||||    
T  4145914 tatcattttcacatactatgaacatgtaatttcatcaacaacaattcaattatcaccaattcatgtattcaaacatatca 4145835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16821147 - 16821189
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  16821147 atccatgaatatgcaaacccaagcaattattcatcaatcataa 16821189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 30153263 - 30153297
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||||||||||||||||||||||    
T  30153263 aaatgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 41661711 - 41661812
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || |||||||||||| || |||| || |||||||||||| | ||  |||||||||||    
T  41661711 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcatcatttccatgtattcaaacatatcatcatagcaagagcacgaat 41661810  T
Q  219 tt 220  Q
    ||    
T  41661811 tt 41661812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 9590838 - 9590754
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattca-tgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| | ||||||||||||  || ||||||||| ||||| | ||||| |||||||||||| | |||||||||||| ||||    
T  9590838 ttgaacatgaagtttcaccaacaacaattcaattatcaccaatttaatgcattcaaacatatcatcatagttagagcacggattt 9590754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 13301552 - 13301472
Alignment:
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaa 217  Q
    |||||||| ||||||||||||||| || ||||||||| ||| |||||| || |||||||| ||| | | ||||||||||||    
T  13301552 tgaacatgcaatttcaccaacaataattcaattatcaccaatttcatgtattcaaacataccatcataattagagcacgaa 13301472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 13312208 - 13312128
Alignment:
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaa 217  Q
    |||||||| ||||||||||||||| || ||||||||| ||| |||||| || |||||||| ||| | | ||||||||||||    
T  13312208 tgaacatgcaatttcaccaacaataattcaattatcaccaatttcatgtattcaaacataccatcataattagagcacgaa 13312128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 14814910 - 14814765
Alignment:
Q  76 caacaacttagcaaaattcaccaatt-gagcacaatttttacaacttatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatc 173  Q
    ||||||| ||||| |||||| ||||| ||||||||||   ||||  ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||    
T  14814910 caacaacatagcacaattcaacaatttgagcacaattc--acaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatc 14814813  T
Q  174 atcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    | ||| |||||| || |||||||||||  | | ||| |||||||||||    
T  14814812 accaatttcatgtattcaaacatatcaccataattaaagcacgaattt 14814765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 230
Target Start/End: Complemental strand, 18897130 - 18897042
Alignment:
Q  142 catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    ||||||||| |||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  18897130 catgtaattccacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaatt 18897042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 34560062 - 34560126
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcat 200  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| ||||||||||||    
T  34560062 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcat 34560126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 12031849 - 12031904
Alignment:
Q  295 aacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 12031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 308
Target Start/End: Original strand, 12812009 - 12812179
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat-aa 238  Q
    ||||||||||| |||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| |||||||| ||||| ||    
T  12812009 aacatgtaattccacccataaacataccataatcatcaattcaagcacaagaaaatagcattacagcaagagcacgaatttaacaacaattgtccatcaa 12812108  T
Q  239 tcaaaattcatacaatatttgaaaatttgca---agtgaaaatgattatgataaaaactaacccccttacctt 308  Q
     | |  ||||||||||||  |||||  ||||   | || | ||||||||||||| ||||||||||||||||||    
T  12812109 cccattttcatacaatatgagaaaa--tgcaaagattgtacatgattatgataataactaacccccttacctt 12812179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 12953127 - 12953210
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||||| ||||||||||||||  ||  |||||||| ||||| ||||||| |||||||||||| | | ||||| ||||||||    
T  12953127 ttgaacatgcaatttcaccaacaacaatctaattatcaccaatttcatgcattcaaacatatcatcataattagaacacgaatt 12953210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 13301398 - 13301323
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||| ||  ||||||||||||||||||||| | | || |  |||| | |||||||||||||||||||    
T  13301398 aaatgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 13312054 - 13311979
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||| ||  ||||||||||||||||||||| | | || |  |||| | |||||||||||||||||||    
T  13312054 aaatgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 15517795 - 15517878
Alignment:
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    |||||||| ||||||||||||||  || ||||||||| ||| |||||| |  |||||||||||| | | |||||||||||||||    
T  15517795 tgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataattagagcacgaattt 15517878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 15876350 - 15876456
Alignment:
Q  244 attcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaa-cccccttaccttaattatctccaactattagctctagcttcacttt 342  Q
    |||||||||||| |||||||||| | | | |||||||||||||| ||  |||| |||||||||||||||||||  ||| |  |||| | |||||||||||    
T  15876350 attcatacaataattgaaaatttac-actaaaaatgattatgatgaattctaaccccccttaccttaattatcgtcaattcctagcccaagcttcacttt 15876448  T
Q  343 agctccta 350  Q
    | ||||||    
T  15876449 aactccta 15876456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 33369010 - 33368927
Alignment:
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    |||||||| |||||||||||| |  || ||||||||| ||||| ||||||| |||||||||||  ||| ||| |||||||||||    
T  33369010 tgaacatgcaatttcaccaaccacaattcaattatcaccaatttcatgcattcaaacatatcaccacaattaaagcacgaattt 33368927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 1467827 - 1467737
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  1467827 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 1467737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 350
Target Start/End: Complemental strand, 11328923 - 11328818
Alignment:
Q  244 attcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttta 343  Q
    |||||||||||| |||||||||| ||  | |||||||||||||| ||  ||||||||||||||||| |||  || |  |  ||| || ||||||||||||    
T  11328923 attcatacaataattgaaaatttacac-taaaaatgattatgatgaattctaacccccttaccttagttagatcaatttcctagatcaagcttcacttta 11328825  T
Q  344 gctccta 350  Q
    |||||||    
T  11328824 gctccta 11328818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 16261775 - 16261809
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  16261775 aaatgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 23492694 - 23492728
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  23492694 aaatgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 28558492 - 28558526
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||||||||||||||| |||||||||    
T  28558492 aaatgattatgataaaaactaaccctcttacctta 28558526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 38168235 - 38168269
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  38168235 aaatgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 53771363 - 53771397
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  53771363 aaatgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 2449189 - 2449152
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  2449189 tgaacatgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 17191879 - 17191936
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| |  |||| | | |||||||||||||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 17912435 - 17912398
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  17912435 tgaacatgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 31412434 - 31412353
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcat 200  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| |||||| || ||||||||||||    
T  31412434 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcat 31412353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 8268682 - 8268650
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  8268682 atgattatgataataactaacccccttacctta 8268650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 8275782 - 8275750
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  8275782 atgattatgataataactaacccccttacctta 8275750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||| ||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 18911300 - 18911332
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  18911300 atgattatgataataactaacccccttacctta 18911332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 189; Significance: 1e-102; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 48663 - 48935
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| | || |    
T  48663 cataacatcaattgaacaagaatcataactcaatctagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatt 48762  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  48763 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccata 48862  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    | |||||||||||||| |||||||||||| | || |||  |||||||||||||| ||||||||||||||||||    
T  48863 agcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 36157 - 36345
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    |||||||||| |||||||| |||||| | ||||| ||| ||||||||||| | ||||||||||||| |||||||| || | |||||||||||||| ||||    
T  36157 tcataacatctattgaacatgaatcacatctcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcata 36256  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      |||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||| ||| ||    |||||||||||||||||    
T  36257 tatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataacatcactacaagagcacgaatttagca 36345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 154095 - 154005
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    ||||||||| |||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  154095 aacatgtaacttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 154005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36101 - 36142
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcata 42  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  36101 atccatgaatatgcaaacccaagcaattattcatcaatcata 36142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 153956 - 153924
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  153956 atgattatgataataactaacccccttacctta 153924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 23507030 - 23507302
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  23507030 cataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatt 23507129  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | |||||||||||||||||||||||||||||    
T  23507130 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattatccata 23507229  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    | |||||||||||||| ||||||||  || | || || | |||||||||||||| ||||||||||||||||||    
T  23507230 agcaaaattcatacaacatttgaaatcttacaaaatggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 27182745 - 27182471
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| | | || |    
T  27182745 cataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatt 27182646  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||     
T  27182645 tgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaattatccatt 27182546  T
Q  238 at--caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||   ||||||||||||| |||||||||||| | || |||  ||||||||||| || ||||||||||||||||||    
T  27182545 atgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 40 - 309
Target Start/End: Complemental strand, 18531264 - 18530988
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    ||||||||||||||||| |||||| | ||||||| | |||||||||||||||||||||||||||| ||||||||| |||||||  |||||||||||||||    
T  18531264 ataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataatt 18531165  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcc-ata 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||     
T  18531164 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaatt 18531065  T
Q  238 atcaaa-attcatacaatatttgaaaatttgcaa----gtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    || ||| |||||||| | ||||||||| ||||||     |||  | ||||||||| || ||||||||||||||||||    
T  18531064 atgaaacattcataccacatttgaaaaattgcaaaatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 40 - 309
Target Start/End: Complemental strand, 22054030 - 22053753
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    ||||||||||||||||| |||||| | ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  22054030 ataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataatt 22053931  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca--t 236  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||  |    
T  22053930 gaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaatt 22053831  T
Q  237 aatcaaaattcatacaatatttgaaaatttgcaa-----gtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |   ||||||||||| | ||||||||| || |||      |||  ||||||||||| || ||||||||||||||||||    
T  22053830 atgaaaaattcataccacatttgaaaaatttcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 39 - 224
Target Start/End: Complemental strand, 29188470 - 29188284
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||| ||||||||||| ||||| ||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |    
T  29188470 cataacatcaattgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatt 29188371  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||    
T  29188370 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 40 - 236
Target Start/End: Original strand, 34939344 - 34939540
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattg 139  Q
    |||||||||| ||||||||||||| | |||||||  |||  |||||||||||| || ||||||||||||||||| | |||||  ||||||||||||||||    
T  34939344 ataacatcaactgaacaagaatcataactcaattcacaatgacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattg 34939443  T
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  34939444 aacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 220
Target Start/End: Original strand, 27009905 - 27010089
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| ||| ||||||||||| | |||||||||||||||| ||||| || | |||||||||||||||||||    
T  27009905 tcataacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagtacaatattcataacttatcatttttacata 27010004  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
     || |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||| ||||  |||||||||||||    
T  27010005 tttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 38 - 221
Target Start/End: Complemental strand, 18778180 - 18777995
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||| | ||||| ||| ||||||||||| | ||||||||||||| |||||||| || | |||||||||||||| ||||    
T  18778180 tcataacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcata 18778081  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattta 221  Q
      |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||| ||||  ||||||||||||||    
T  18778080 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 38 - 221
Target Start/End: Complemental strand, 43443583 - 43443398
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||| ||| | ||||| | | ||||||||||| | |||||||||||||||||||||| || | |||||||||||||| ||||    
T  43443583 tcataacatcatttgaacaagactcacatctcaaatcaacaacaacttagaagaaattcaccaattgagcacaatattcataacttatcatttttgcata 43443484  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattta 221  Q
      ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||  ||||||||||||||    
T  43443483 tatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 19499963 - 19500151
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||| | ||||| ||| ||||||||||| | |||||||||| || |||||||| || | |||||||||||||| ||||    
T  19499963 tcataacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcata 19500062  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  19500063 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 22366669 - 22366481
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| ||| ||||||||||| | ||||||||||||| |||||||| || | |||||||||||||| ||||    
T  22366669 tcataacatcatttgaacaagcatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcata 22366570  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  22366569 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 25426692 - 25426880
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||| | ||||| ||| ||||||||||| | |||||||||| || |||||||| || | |||||||||||||| ||||    
T  25426692 tcataacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcata 25426791  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  25426792 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 12438 - 12626
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||| | ||||| ||| ||||||||||| | |||||||||| || |||||||| || | ||||||||| |||| ||||    
T  12438 tcataacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcata 12537  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  12538 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 20623100 - 20623232
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  20623100 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 20623199  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  20623200 agttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 21233660 - 21233528
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  21233660 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 21233561  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  21233560 agttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 40 - 224
Target Start/End: Complemental strand, 21073781 - 21073595
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||| |||||||||||||| | ||||| ||| ||||||||||| | |||||||||| || |||||||| || | |||||||||||||| ||||      
T  21073781 ataacatcatttgaacaagaatcacaactcaaattaacaacaacttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatata 21073682  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
    |||||||||||||||||||||||| |||||| || |||| ||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  21073681 tgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcacagcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 104 - 234
Target Start/End: Complemental strand, 25900538 - 25900408
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| |  ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |     
T  25900538 gcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaa 25900439  T
Q  204 agttagagcacgaatttagcaacaattatcc 234  Q
    |||| ||||||||||||||||||||||||||    
T  25900438 agttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 4200173 - 4199985
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||||||||||| |||||| | ||||| | | ||||||| ||  | ||||||||||||| |||| ||| || | |||||||||||||| ||||    
T  4200173 tcataacatcaattgaacatgaatcacatctcaaatcaacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcata 4200074  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||| |||   |||||||||||||||||    
T  4200073 tatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 16536328 - 16536460
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||| |     
T  16536328 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgcatacaaacatatcatcaa 16536427  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  16536428 agttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 37052875 - 37053007
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||  ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  37052875 gcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 37052974  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  37052975 agttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 140 - 233
Target Start/End: Original strand, 32950862 - 32950955
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatc 233  Q
    |||||||||||||| | |||||||||||||||||||||| |||| || || || ||| ||| |||||||||||||||||||| |||||||||||    
T  32950862 aacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaattatc 32950955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  278 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 352  Q
    |||||||||| ||  ||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 21310793 - 21310709
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||| ||||| ||||||| |||||||||||| | |||||||||||||||||    
T  21310793 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 10778058 - 10777968
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  10778058 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 10777968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 23514729 - 23514819
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  23514729 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 23514819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 19862372 - 19862456
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||| | | |||||||||||||||    
T  19862372 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataattagagcacgaattt 19862456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 23981600 - 23981516
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| || |||||||||||  || ||||||||| ||||| |||||||||||||||||||| | | |||||||||||||||    
T  23981600 ttgaacatgcaaattcaccaacaacaattcaattatcaccaatttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 308
Target Start/End: Complemental strand, 11212153 - 11211983
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat-aa 238  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||| |||| | ||| ||    
T  11212153 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaa 11212054  T
Q  239 tcaaaattcatacaatatttgaaaatttgc---aagtgaaaatgattatgataaaaactaacccccttacctt 308  Q
     | |  ||||||||| ||  |||||  |||   || |||| ||||||||||||| ||||||||||||||||||    
T  11212053 cccattttcatacaacatgagaaaa--tgcaaaaattgaacatgattatgataataactaacccccttacctt 11211983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12382 - 12424
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  12382 atccatgaatatgcatacccaagcaattattcatcaatcataa 12424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 1219608 - 1219518
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||| ||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  1219608 aacatgtaatttcacccacaaacataccataatcatcaattaatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 1219518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 17471676 - 17471586
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  17471676 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaatt 17471586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18778236 - 18778194
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  18778236 atccatgaatatgcatacccaagcaattattcatcaatcataa 18778194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21073839 - 21073797
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  21073839 atccatgaatatgcatacccaagcaattattcatcaatcataa 21073797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22366725 - 22366683
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  22366725 atccatgaatatgcatacccaagcaattattcatcaatcataa 22366683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25426636 - 25426678
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  25426636 atccatgaatatgcatacccaagcaattattcatcaatcataa 25426678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 35791186 - 35791096
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||  |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  35791186 aacatgtaatttcactcacaaacataccataatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaacaatt 35791096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 21297259 - 21297175
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||| | |||||||||||| | |||||||| ||||||||    
T  21297259 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcgttcaaacatatcatcatagttagaggacgaattt 21297175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 21222692 - 21222609
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||||| ||||||||||||||  ||  |||||||| ||||| ||||||| |||||||||||| | | ||||||||||||||    
T  21222692 ttgaacatgcaatttcaccaacaacaatttaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaatt 21222609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 22885806 - 22885889
Alignment:
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||| | | ||| |||||||||||    
T  22885806 tgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattaaagcacgaattt 22885889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 29918129 - 29918212
Alignment:
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    |||||||| ||||||||||||||  || ||||||||||||| |||||| || |||||||||||| | | || ||||||||||||    
T  29918129 tgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatatcatcataattggagcacgaattt 29918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 36989858 - 36989768
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| |||| ||||||||||||||| ||||||||    
T  36989858 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagctagagcacgaatttaacaacaatt 36989768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43443639 - 43443597
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  43443639 atccatgaatatgcaaacccaagcaattattcatcaatcataa 43443597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 308
Target Start/End: Original strand, 11343006 - 11343039
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctt 308  Q
    ||||||||||||||||||||||||||||||||||    
T  11343006 aaatgattatgataaaaactaacccccttacctt 11343039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 21617181 - 21617262
Alignment:
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||| |||||||| |||||  || ||||||||| ||||| ||||||| |||||||||||| | | ||||||||||||||    
T  21617181 gaacatgcaatttcactaacaacaatccaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaatt 21617262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 350
Target Start/End: Complemental strand, 5450771 - 5450695
Alignment:
Q  274 aaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    |||||||||||||| ||  ||||||||||||||||||||||   ||| |  |||| | |||||||||||||||||||    
T  5450771 aaaatgattatgatgaattctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctccta 5450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 7425492 - 7425582
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || | |||| ||||||||| |  || ||| ||| ||||  |||||||||||||||||| ||||    
T  7425492 aacatgtaatttcacccacaaacataccataaccatcgattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaataatt 7425582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 16105965 - 16105999
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  16105965 aaatgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 21932469 - 21932379
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  21932469 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 21932379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 21938639 - 21938549
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  21938639 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 21938549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 35582204 - 35582294
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  35582204 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 35582294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 19862547 - 19862604
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| | |||||   | |||||||||||||||||    
T  19862547 ctaacccccttaccttaattatcaccaatttttagcctaaacttcactttagctccta 19862604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 20623281 - 20623318
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  20623281 tgaacatgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 21222519 - 21222462
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||| ||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctccta 21222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 21233479 - 21233442
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  21233479 tgaacatgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 23328859 - 23328896
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  23328859 tgaaattgattatgataataactaacccccttacctta 23328896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 24616463 - 24616500
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  24616463 tgaaattgattatgataataactaacccccttacctta 24616500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 24712839 - 24712876
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  24712839 tgaaattgattatgataataactaacccccttacctta 24712876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 24745857 - 24745894
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  24745857 tgaaattgattatgataataactaacccccttacctta 24745894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 25900357 - 25900320
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  25900357 tgaacatgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 26559916 - 26559815
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| |||||| || ||||||||| || | ||  |||||||||||    
T  26559916 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatataatcatagcaagagcacgaat 26559817  T
Q  219 tt 220  Q
    ||    
T  26559816 tt 26559815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 37053056 - 37053093
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  37053056 tgaacatgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 4200227 - 4200187
Alignment:
Q  3 ccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||| | ||||||||| |||||||||||||||    
T  4200227 ccatgaatatgcaaacccaagcaatcattcatcaatcataa 4200187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 5450927 - 5450867
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacata 196  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| ||||||||    
T  5450927 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacata 5450867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 7425631 - 7425663
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  7425631 atgattatgataataactaacccccttacctta 7425663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 24084223 - 24084303
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatca 199  Q
    ||||||||| ||||| | |||||||||||||| ||||||||  || ||||||||| ||| |||||| || |||||||||||    
T  24084223 tatcattttcacatactatgaacatgtaattttaccaacaacaattcaattatcaccaatttcatgtattcaaacatatca 24084303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 35791047 - 35791015
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  35791047 atgattatgataataactaacccccttacctta 35791015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 38 - 350
Target Start/End: Original strand, 3060030 - 3060344
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataa 136  Q
    |||||||||||||||||||||||||| | |||||| || |||||||||| |||||||||||| ||||||| |||||| |||| ||||||||||||||||     
T  3060030 tcataacatcaattgaacaagaatcataactcaatctaacaacaacttaacaaaattcaccatttgagcataattttcacaatttatcatttttacatat 3060129  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||| |||| || |||||| ||||||||||||||||||||||||||||    
T  3060130 ttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccat 3060229  T
Q  237 aatcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagct 335  Q
    || ||||||||||| || |||||||||||| | || |||  |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||    
T  3060230 aagcaaaattcatataacatttgaaaatttacaaaatgatgatgattatgataaagacttacccccttaccttcattatctccaactattagctctagct 3060329  T
Q  336 tcactttagctccta 350  Q
    ||||||| |||||||    
T  3060330 tcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 16211831 - 16212103
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  16211831 cataacatcaatttaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatt 16211930  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  16211931 tgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattgtccata 16212030  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    | |||||||||||||| |||||||| ||  | || |||  |||||||||||||| ||||||||||||||||||    
T  16212031 agcaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 11580937 - 11580661
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| | | || |    
T  11580937 cataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatt 11580838  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||     
T  11580837 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaataattatccatt 11580738  T
Q  238 at---caaaattcatacaatatttgaaaatttgc--aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||    ||||||||||||| |||||||||||| |  || |||  |||||||||||||| ||||| ||||||||||||    
T  11580737 atgcaaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 38 - 309
Target Start/End: Complemental strand, 13037213 - 13036938
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataa 136  Q
    ||||||||| |||||||||||||||| | |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| | | ||     
T  13037213 tcataacattaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctat 13037114  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  13037113 ttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 13037014  T
Q  237 aat--caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
     ||   ||||||||||||| |||||||||||| | || |||  ||||||||| | || ||||||||||||||||||    
T  13037013 tatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 40 - 236
Target Start/End: Complemental strand, 47481228 - 47481031
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||||||||||||||||| | ||||||| | |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||    
T  47481228 ataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatattt 47481129  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  47481128 gaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 39 - 230
Target Start/End: Complemental strand, 18254033 - 18253841
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |    
T  18254033 cataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatt 18253934  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  18253933 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaatt 18253841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 42 - 309
Target Start/End: Original strand, 36052735 - 36053003
Alignment:
Q  42 aacatcaattgaacaagaatcaaacctcaattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaa 141  Q
    |||||||||||||||||||||||| ||||| |   ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  36052735 aacatcaattgaacaagaatcaaatctcaaatt--aacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa 36052832  T
Q  142 catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataat-- 239  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||| |  ||||||||||||||||||||| ||      
T  36052833 catgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagtataaatttagcaacaattatccattatac 36052932  T
Q  240 caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
     ||||||||||||| |||||||| ||  | || |||  |||||||||||||| ||||||||||||||||||    
T  36052933 aaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 40 - 218
Target Start/End: Complemental strand, 16479147 - 16478968
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||||||| ||||||||||| ||||| |||  || |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  16479147 ataacatcaattgagcaagaatcaaatctcaaattaaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatattt 16479048  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaat 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| |||||||||||    
T  16479047 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcgcagtaagagcacgaat 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 40 - 235
Target Start/End: Original strand, 13321080 - 13321278
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt--accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||| |||||| | |||||||  || | ||||||||||||||||||||||||||||||||||  | |||||  ||||| |||||| |    
T  13321080 ataacatcaattgaacatgaatcatatctcaattcaacaatcaacttagcaaaattcaccaattgagcacaatttc-ataacttgacatttatacatact 13321178  T
Q  138 tg--aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca 235  Q
    |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  13321179 ttgaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 38 - 308
Target Start/End: Original strand, 2437521 - 2437794
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctca-attaccaacaacttagcaaaa-ttcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||||| |||| |||| ||||||||||| |||| |||||||||||| |||||| || | |||||||||||||| ||||    
T  2437521 tcataacatcatttgaacaagaatcaaatctcatattaacaacaacttaggaaaaattcaccaattgaacacaatcttcataacttatcatttttgcata 2437620  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca 235  Q
      ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||| |||   |||||||||||||||||| |||| | ||    
T  2437621 tatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcaagaattgttca 2437720  T
Q  236 taat-caaaattcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttacctt 308  Q
    | || | |  ||||||||| ||  ||||||    || || | ||||||||||||| ||||||||||||||||||    
T  2437721 ttatcccattttcatacaacatgagaaaatgcaaaattgtacatgattatgataataactaacccccttacctt 2437794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 10989474 - 10989661
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaattaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacataa 136  Q
    ||||||||||| |||||||||||||| | ||||| |  ||||||||||| | |||||||||||||||||||||| || | |||||||||||||| ||||     
T  10989474 tcataacatcatttgaacaagaatcacaactcaaattacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatat 10989573  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
     ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  10989574 atgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 220
Target Start/End: Original strand, 13572740 - 13572924
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| ||| ||||||||||| | |||||||||||||||||||||| || | |||||||||||||||||||    
T  13572740 tcataacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacata 13572839  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
     || |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| ||||  |||||||||||||    
T  13572840 tttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 38 - 236
Target Start/End: Complemental strand, 25292537 - 25292338
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataa 136  Q
    ||||||||||| ||||||||| |||| | ||||| ||| | ||||| ||| | ||||||||||||||||||||| || | | |||||| ||||||||||     
T  25292537 tcataacatcatttgaacaagcatcacatctcaaattaacgacaacctaggagaattcaccaattgagcacaatattcatagcttatcctttttacatat 25292438  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    || |||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||| | |||| |||||| |||||||||||||||||||||    
T  25292437 ttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaaagttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 13911213 - 13911024
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaatt-accaacaactt-agca-aaattcaccaattgagcacaatttttacaacttatcatttttacat 134  Q
    ||||||||||||||||||| |||||| | ||||| | | ||||||||| || | |||||||||||||||||| ||| || | |||||||||||||| |||    
T  13911213 tcataacatcaattgaacatgaatcacatctcaaatcaacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcat 13911114  T
Q  135 aattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
    |  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||   |||||||||||||||||    
T  13911113 atatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 11516358 - 11516490
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  11516358 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 11516457  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  11516458 agttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 15441696 - 15441564
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  15441696 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 15441597  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  15441596 agttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 30262261 - 30262129
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  30262261 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 30262162  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  30262161 agttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 236
Target Start/End: Original strand, 7293085 - 7293279
Alignment:
Q  42 aacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattga 140  Q
    ||||||||||| |||||||||| | ||||||| | ||||||| |  |||| |||| | |||  |||||||||| | ||||| ||||||| ||||| || |    
T  7293085 aacatcaattgcacaagaatcatagctcaattcaacaacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcattttcacatatttaa 7293183  T
Q  141 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||    
T  7293184 acatgtaatttaaccaacaatcatacaattattattaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 264
Target Start/End: Complemental strand, 296162 - 295936
Alignment:
Q  42 aacatcaattgaacaagaatcaaacctcaatt--accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattg 139  Q
    ||||||||||||||| |||||| | | |||||  | || ||| |||||||||||||||| |||   | |||||||| ||||| ||||||||||||||||     
T  296162 aacatcaattgaacatgaatcacaacacaattcaaacatcaatttagcaaaattcaccatttggatataatttttataacttctcatttttacataattc 296063  T
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataat 239  Q
    |||||| |||||||||||||||||||  ||||||||| ||||||||| ||||||||| ||   || ||||| ||||||||||||||||||||| ||| ||    
T  296062 aacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaattagaacacgaatttagcaacaattattcattat 295963  T
Q  240 -caaaa-ttcatacaatatttgaaaat 264  Q
     ||||| |||||||||  |||||||||    
T  295962 gcaaaatttcatacaaagtttgaaaat 295936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 32493980 - 32493898
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  32493980 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 126736 - 126818
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||| ||||    
T  126736 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatgattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 1936951 - 1936869
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||    
T  1936951 aaatgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatgattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 111203 - 111121
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||| ||||    
T  111203 aaatgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatgattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 278 - 357
Target Start/End: Complemental strand, 7283987 - 7283908
Alignment:
Q  278 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||| ||||||||||||||||||||||||||| |||| ||||| ||| ||||||||||| ||||||||| ||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattct 7283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 48622757 - 48622664
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    ||||||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||||||| ||||| ||||||||||||||||| |||||    
T  48622757 ttgaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaatt 48622664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 16915012 - 16914928
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||||||| ||||||||| |||||||||||| | | |||||||||||||||    
T  16915012 ttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 16914928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 13377819 - 13377924
Alignment:
Q  244 attcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttta 343  Q
    |||||||||| | |||||||||| ||  | |||||||||||||| ||  ||||||||||||||||||||||| |||| |  |||| | ||||||||||||    
T  13377819 attcatacaacaattgaaaatttacac-taaaaatgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttta 13377917  T
Q  344 gctccta 350  Q
    |||||||    
T  13377918 gctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 15950879 - 15950789
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  15950879 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 15950789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 18980109 - 18980019
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  18980109 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 18980019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 9611471 - 9611555
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||| ||||| ||||||| |||||||||||| | | |||||||||||||||    
T  9611471 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 9611555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 9839042 - 9839126
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||| ||||| ||||||| |||||||||||| | | |||||||||||||||    
T  9839042 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 9839126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 15927736 - 15927826
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||||||||||    
T  15927736 aacatgtaatttcacccacaagcataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaatt 15927826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 28722256 - 28722357
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||| | |  ||||||||||||    
T  28722256 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataactagagcacgaat 28722355  T
Q  219 tt 220  Q
    ||    
T  28722356 tt 28722357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 48356807 - 48356891
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||| | | ||||||||| |||||    
T  48356807 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacaaattt 48356891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 3049903 - 3049937
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||||||||||||||||||||||    
T  3049903 aaatgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10989418 - 10989460
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  10989418 atccatgaatatgcaaacccaagcaattattcatcaatcataa 10989460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 13758538 - 13758628
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||| ||||||    
T  13758538 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaatt 13758628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 15760202 - 15760112
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||  || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||| ||||    
T  15760202 aacatgtaatttcacccacaaacatatcataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataatt 15760112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 14272000 - 14271899
Alignment:
Q  121 tatcatttttacataatt-gaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| || ||||||| ||||||||||||||  ||  |||||||| ||||| ||||||| |||||||||||  | | |||||||||||||    
T  14272000 tatcattttcacatactttgaacatgcaatttcaccaacaacaattgaattatcaacaatttcatgcattcaaacatatcaccataattagagcacgaat 14271901  T
Q  219 tt 220  Q
    ||    
T  14271900 tt 14271899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 14935506 - 14935607
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||  | |  ||||||||||||    
T  14935506 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcaccataactagagcacgaat 14935605  T
Q  219 tt 220  Q
    ||    
T  14935606 tt 14935607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 15363099 - 15363200
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||  | |  ||||||||||||    
T  15363099 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcaccataactagagcacgaat 15363198  T
Q  219 tt 220  Q
    ||    
T  15363199 tt 15363200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 15358943 - 15359023
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatca 199  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||    
T  15358943 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 15359023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 13377692 - 13377775
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||| ||| | | || |||||||||||    
T  13377692 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 13377775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 2029242 - 2029276
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  2029242 aaatgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 2190119 - 2190085
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||||||||||| ||||||||||    
T  2190119 aaatgattatgataaaaactaaccgccttacctta 2190085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 7822896 - 7822986
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  7822896 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 7822986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 7830207 - 7830297
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  7830207 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 7830297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13911269 - 13911227
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||| | ||||| |||||||||||||||||||    
T  13911269 atccatgaatatgcaaacccaagaaattattcatcaatcataa 13911227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  194 atatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||| | |||| ||||||||||||||||||||||||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 14250986 - 14250896
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||| ||||||||    
T  14250986 aacatgtaatttcacccaaaaacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttaacaacaatt 14250896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  194 atatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||| | |||| ||||||||||||||||||||||||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 17223846 - 17223796
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcacttta 343  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||    
T  17223846 ctaacccccttaccttaattatcaccaattcttagcccaagcttcacttta 17223796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 27101725 - 27101635
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  27101725 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 27101635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 27109073 - 27108983
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  27109073 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 27108983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 27176601 - 27176691
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  27176601 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 27176691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 38783817 - 38783727
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  38783817 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 38783727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 42056222 - 42056188
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  42056222 aaatgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 7293328 - 7293365
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  7293328 tgaacatgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 11516539 - 11516576
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  11516539 tgaacatgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 14113940 - 14113903
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  14113940 tgaacatgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 15441515 - 15441478
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  15441515 tgaacatgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 30262080 - 30262043
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  30262080 tgaacatgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 13448928 - 13448868
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaatt 180  Q
    ||||||||| ||||| | |||||||| ||||||||||||||| || ||||||||| |||||    
T  13448928 tatcattttcacatactatgaacatgcaatttcaccaacaataattcaattatcaccaatt 13448868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 13758677 - 13758709
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  13758677 atgattatgataataactaacccccttacctta 13758709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 15862226 - 15862258
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  15862226 atgattatgataataactaacccccttacctta 15862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 15927875 - 15927907
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  15927875 atgattatgataataactaacccccttacctta 15927907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 16919870 - 16919926
Alignment:
Q  294 taacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||| |||||||||| |||| |  |||| | |||||||||||||||||||    
T  16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 16919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 18979970 - 18979938
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  18979970 atgattatgataataactaacccccttacctta 18979938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 49047758 - 49047694
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcat 200  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| ||||||| ||||    
T  49047758 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatgtcat 49047694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 40 - 357
Target Start/End: Complemental strand, 54118441 - 54118120
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||||||||||||||||| | || ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||| || | | || ||    
T  54118441 ataacatcaattgaacaagaatcataactaaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaattgttcctattt 54118342  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataa 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||| |    
T  54118341 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccatta 54118242  T
Q  239 t--caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagct 335  Q
    |   ||||||||||||| |||||||||||  | || | |  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  54118241 tgcaaaaattcatacaacatttgaaaattcacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagct 54118142  T
Q  336 tcactttagctcctatgcttct 357  Q
    ||||||| |||| |||| ||||    
T  54118141 tcacttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 76 - 309
Target Start/End: Original strand, 121992 - 122226
Alignment:
Q  76 caacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 175  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  121992 caacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcat 122091  T
Q  176 caattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataatcaaaattcatacaatatttgaaaatttgc-aagtga 274  Q
    ||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| | || |||    
T  122092 caattcatgcatacaaacatatcatcacagttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatga 122191  T
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
      |||||||||||||| ||||| ||||||||||||    
T  122192 tgatgattatgataaagactaatccccttacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 13246495 - 13246769
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| | | || |    
T  13246495 cataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatt 13246594  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||| ||||||||||||||     
T  13246595 tgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattatccatt 13246694  T
Q  238 at--caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||   ||||||||||||| |||||||||||| | || |||  |||||||||||||| ||||||||||||||||||    
T  13246695 atgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 4 - 309
Target Start/End: Complemental strand, 10104483 - 10104170
Alignment:
Q  4 catgaatatgcataaccaagcaattattcatcaatcataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattg 102  Q
    |||||||||| ||| ||||||||| |||||||||  | ||||||||||||||| |||||| | ||||||| | |||||||||||||||||||||||||||    
T  10104483 catgaatatgtatacccaagcaatgattcatcaacaacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattg 10104384  T
Q  103 agcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataa 202  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10104383 agcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca 10104284  T
Q  203 cagttagagcacgaatttagcaacaattatcca--taatcaaaattcatacaatatttgaaaatttgcaa-----gtgaaaatgattatgataaaaacta 295  Q
    ||||| ||||||| |||||||||||||||||||  ||   ||||||||||| | ||||||||| ||| ||      |||  ||||||||||| || ||||    
T  10104283 cagttggagcacggatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagacta 10104184  T
Q  296 acccccttacctta 309  Q
    ||||||||||||||    
T  10104183 acccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 40 - 309
Target Start/End: Complemental strand, 15675286 - 15675009
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    ||||||||||||||||| |||||| | ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  15675286 ataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataatt 15675187  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca--t 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||  |    
T  15675186 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaatt 15675087  T
Q  237 aatcaaaattcatacaatatttgaaaatttgcaa-----gtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |   ||||||||||| | ||||||||| ||||||      |||  ||||||||||| || ||||||||||||||||||    
T  15675086 atgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 40 - 207
Target Start/End: Original strand, 31115695 - 31115863
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    ||||||||||||||||| |||||| | ||||||| | ||||||||||| ||||||||||||||||||| |||||| |||||||  ||||||||||||||     
T  31115695 ataacatcaattgaacatgaatcatatctcaattcaacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatg 31115794  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagtt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31115795 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagtt 31115863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 236
Target Start/End: Complemental strand, 13048421 - 13048221
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | |||||  || ||||||||||| | ||||||| |||||||||||||| || | |||||||| ||||||||||    
T  13048421 tcataacatcatttgaacaagcatcacatctcaaactaacaacaacttaggagaaattcatcaattgagcacaatattcataacttatcctttttacata 13048322  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca 235  Q
     || |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||   |||| ||||| |||||||||||||||||||||    
T  13048321 tttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattgaagttggagcatgaatttagcaacaattatcca 13048222  T
Q  236 t 236  Q
    |    
T  13048221 t 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 220
Target Start/End: Original strand, 10644283 - 10644467
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||||||||||| |||||| | ||||| | | ||||||||||| | ||||||||||||| ||||||||  | | |||||| ||||||||||||    
T  10644283 tcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata 10644382  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||    
T  10644383 tttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 26680331 - 26680463
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||||||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  26680331 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 26680430  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  26680431 agttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 47357718 - 47357906
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||| | ||||| ||| ||||||||||| | ||||||||||||| |||||||| || | |||||||||||||| ||||    
T  47357718 tcataacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcata 47357817  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      |||||||||||||||||||||||| |||||| || ||||||| |||||||||||||||| ||| ||||  |||||||||||||||||    
T  47357818 tatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 10488693 - 10488825
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  10488693 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 10488792  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  10488793 agttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 16328058 - 16327926
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  16328058 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 16327959  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  16327958 agttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 220
Target Start/End: Complemental strand, 40885784 - 40885570
Alignment:
Q  7 gaatatgcataaccaagcaattattcatcaatcataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagc 105  Q
    ||||||||||| | |||| || |||||||||  | ||||||||||||||| |||||| | ||||||| | ||| ||||||||||| ||||||||||||||    
T  40885784 gaatatgcatacctaagccatgattcatcaacaacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagc 40885685  T
Q  106 acaatttttacaacttatcatttttacataatt-gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataaca 204  Q
    | |||||  | |||||  ||||| |||||| || |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||  |||    
T  40885684 ataatttc-ataacttgacatttatacatactttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccaca 40885586  T
Q  205 gttagagcacgaattt 220  Q
    ||| ||| ||||||||    
T  40885585 gttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 25119141 - 25119059
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  25119141 aaatgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 163 - 309
Target Start/End: Original strand, 33240890 - 33241043
Alignment:
Q  163 atacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca--taatcaaaattcatacaatatttga 260  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||  ||   ||||||||||| | ||||||    
T  33240890 atacaatcatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttga 33240989  T
Q  261 aaatttgcaa-----gtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||| ||||||      |||  ||||||||||| || ||||||||||||||||||    
T  33240990 aaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 5682462 - 5682380
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||||| ||||||||| ||||    
T  5682462 aaatgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatgattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 232
Target Start/End: Original strand, 7850107 - 7850259
Alignment:
Q  81 acttagcaaaatt-caccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaat 179  Q
    ||||||||||||| || || |||||||||||||| | |||||  |||||| ||||||||| ||||  |||| |||||||||||| ||| || ||||||||    
T  7850107 acttagcaaaatttcatcacttgagcacaattttcataacttcacattttcacataattggacatacaattccaccaacaatcacacagttttcatcaat 7850206  T
Q  180 tcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattat 232  Q
     ||| ||| |||||||| |||  |  || ||||||||||||| || |||||||    
T  7850207 acattcattcaaacataacatctccattggagcacgaatttaacagcaattat 7850259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 230
Target Start/End: Complemental strand, 17145845 - 17145655
Alignment:
Q  42 aacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattg- 139  Q
    ||||||||| ||||| |||||| | |||| || | ||||||| || |||||||||| ||||||| | |||||  |||||||| ||||| |||||| ||      
T  17145845 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattcactaattgagtataatttc-acaacttaacatttatacatactttg 17145747  T
Q  140 -aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
     |||||||||||||||| |||| ||||| || |||||||||||||| | |  || ||| ||| ||||| |||||||||||||| || |||||    
T  17145746 aaacatgtaatttcacccacaaacataccataatcatcaattcatgtacaagaaaatagcatcacagtaagagcacgaatttaacatcaatt 17145655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 18169138 - 18169228
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  18169138 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 18169228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 7132153 - 7132063
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||||||||||    
T  7132153 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaatt 7132063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 19020654 - 19020744
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||| ||||    
T  19020654 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaatt 19020744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 221
Target Start/End: Complemental strand, 15013365 - 15013282
Alignment:
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattta 221  Q
    |||||||| ||||||||||||||  || ||||||||||||| ||||||||| | |||||||||| | | ||||||||||||||||    
T  15013365 tgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattc-aacatatcatcataattagagcacgaattta 15013282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 18276597 - 18276681
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  ||  |||||||| ||||| ||||||| |||||||||||| | | |||||||||||||||    
T  18276597 ttgaacatgcaatttcaccaacaacaatttaattatcaccaatttcatgcattcaaacatatcatcatatttagagcacgaattt 18276681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 350
Target Start/End: Complemental strand, 41165884 - 41165808
Alignment:
Q  274 aaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    |||||||||||||| ||  ||||||||||||| ||||||||| |||| |  |||| | |||||||||||||||||||    
T  41165884 aaaatgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 47535149 - 47535065
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    |||||| || ||||||||||||||  || ||||||||| ||||| ||||||| |||||||||||| | | |||||||||||||||    
T  47535149 ttgaacttgaaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 47535065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 7964802 - 7964712
Alignment:
Q  131 acataattgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||| ||||||||| ||||||||||||||  || ||||||||| ||| |||||| || |||||||||||| | | |||||||||| ||||    
T  7964802 acatacttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcatcataattagagcacggattt 7964712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10644227 - 10644269
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  10644227 atccatgaatatgcaaacccaagcaattattcatcaatcataa 10644269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 18238302 - 18238177
Alignment:
Q  76 caacaacttagcaaaattcaccaatt-gagcacaatttttacaacttatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatc 173  Q
    ||||||| ||||| |||||| ||||| ||||||||||   ||||  ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||    
T  18238302 caacaacatagcacaattcaacaattagagcacaattc--acaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatc 18238205  T
Q  174 atcaat-tcatgcatacaaacatatcat 200  Q
    | |||| ||||| || ||||||||||||    
T  18238204 accaatatcatgtattcaaacatatcat 18238177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 40905034 - 40904934
Alignment:
Q  122 atcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    |||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| |||||| || |||||||||||| | |  |||||||||||||    
T  40905034 atcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcagcaatttcatgtattcaaacatatcatcataactagagcacgaatt 40904935  T
Q  220 t 220  Q
    |    
T  40904934 t 40904934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 111406 - 111453
Alignment:
Q  4 catgaatatgcataaccaagcaattattcatcaatcataacatcaatt 51  Q
    |||||||||||||| ||||||||| ||||||||| || ||||||||||    
T  111406 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaatt 111453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 8374576 - 8374722
Alignment:
Q  42 aacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt-g 139  Q
    ||||||||| ||||| |||||| | |||| || | ||||||| ||  ||||||||| ||||||| | |||||  | |||||| ||||| |||||| || |    
T  8374576 aacatcaatggaacatgaatcacatctcatttcaacaacaacatattaaaattcactaattgagtataatttc-ataacttaacatttatacatactttg 8374674  T
Q  140 aa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 186  Q
    || |||||||||||||| |||| ||||| || ||||||||||||||||    
T  8374675 aagcatgtaatttcacccacaaacataccataatcatcaattcatgca 8374722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 15044991 - 15045074
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||| ||| | | || |||||||||||    
T  15044991 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 15045074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 31132543 - 31132613
Alignment:
Q  202 acagttagagcacgaatttagcaacaattatcca--taatcaaaattcatacaatatttgaaaatttgcaa 270  Q
    |||||| |||||||||||||||||||||||||||  ||   ||||||||||| | ||||||||| ||||||    
T  31132543 acagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaa 31132613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 14901521 - 14901584
Alignment:
Q  244 attcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||| ||||||| ||||||   |||||||||||||| |||  ||||||||||||||||    
T  14901521 attcatacaataattgaaaaattgcaat--aaaatgattatgatgaaatttaacccccttacctta 14901584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 14952083 - 14952117
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  14952083 aaatgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 15135941 - 15135907
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  15135941 aaatgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 15272245 - 15272211
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  15272245 aaatgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 20000891 - 20000981
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||| ||||||    
T  20000891 aacatgtaatttcacccagaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaatt 20000981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 22738437 - 22738483
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 186  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  22738437 aacatgtaatttcacccacaaacataccataatcatcaattcatgca 22738483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 7185945 - 7185844
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||  ||||||||||||||  || |||||||||  |||| ||||||| |||||||||||| | | ||||||||| |||    
T  7185945 tatcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcactaatttcatgcattcaaacatatcatcataattagagcacaaat 7185846  T
Q  219 tt 220  Q
    ||    
T  7185845 tt 7185844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 310
Target Start/End: Original strand, 14996445 - 14996478
Alignment:
Q  277 atgattatgataaaaactaacccccttaccttaa 310  Q
    ||||||||||||| ||||||||||||||||||||    
T  14996445 atgattatgataataactaacccccttaccttaa 14996478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 16327877 - 16327840
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  16327877 tgaacatgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 16609050 - 16609013
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  16609050 tgaacatgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 17145611 - 17145574
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  17145611 tgaacatgattatgataataactaacccccttacctta 17145574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 22352018 - 22351981
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  22352018 tgaaattgattatgataataactaacccccttacctta 22351981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 26339321 - 26339358
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  26339321 tgaaattgattatgataataactaacccccttacctta 26339358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 26680512 - 26680549
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  26680512 tgaacatgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 38764873 - 38764934
Alignment:
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatc 198  Q
    |||||||||||||||||||||||  || ||||||||| ||| ||||| ||| ||||||||||    
T  38764873 tgaacatgtaatttcaccaacaacaattcaattatcaccaatttcattcattcaaacatatc 38764934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 41256470 - 41256370
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| | ||||| |||| | | |||||||||||||    
T  41256470 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattc-aacatttcatcataattagagcacgaat 41256372  T
Q  219 tt 220  Q
    ||    
T  41256371 tt 41256370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 47534990 - 47534933
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| |  | || | |||||||||||||||||||    
T  47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctccta 47534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 7132014 - 7131982
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  7132014 atgattatgataataactaacccccttacctta 7131982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 15109433 - 15109373
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacata 196  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| ||||||||    
T  15109433 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacata 15109373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 15287194 - 15287162
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  15287194 atgattatgataataactaacccccttacctta 15287162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 15294303 - 15294271
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  15294303 atgattatgataataactaacccccttacctta 15294271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 20001030 - 20001062
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  20001030 atgattatgataataactaacccccttacctta 20001062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 181; Significance: 1e-97; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 38 - 309
Target Start/End: Original strand, 12179 - 12450
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| | |    
T  12179 tcataacatcaattgaacaagaatcaaatctcaattac-aacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacatt 12277  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12278 taaacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaattatccata 12377  T
Q  238 atcaaaa-ttcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||||| ||||||||  |||||||| ||   || | || |||||||||||||| ||||||||||||||||||    
T  12378 atcaaaatttcatacagcatttgaaagttacaaaattaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12123 - 12156
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcat 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  12123 atccatgaatatgcatacccaagcaattattcat 12156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 180; Significance: 4e-97; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 128366 - 128095
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| || |||||||| |||||||||||||||||| |||||||| ||  |||||| | ||    
T  128366 cataacatcaattgaacaagaatcaaatctcaattaacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacattt 128267  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataa 238  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  128266 gaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataa 128167  T
Q  239 tcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
     ||||||||||||||  ||||||||||||| || |||| |||||||||||||| ||||||||||||||||||    
T  128166 gcaaaattcatacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 31864 - 31675
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaatt-accaacaactt-agca-aaattcaccaattgagcacaatttttacaacttatcatttttacat 134  Q
    ||||||||||||||||||| |||||| | ||||| | | ||||||||| || | |||||||||||||||||| ||| || | |||||||||||||| |||    
T  31864 tcataacatcaattgaacatgaatcacatctcaaatcaacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcat 31765  T
Q  135 aattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
    |  |||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||| ||| ||    |||||||||||||||||    
T  31764 atatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatcaccacaagagcacgaatttagca 31675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31920 - 31878
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  31920 atccatgaatatgcaaacccaagcaattattcatcaatcataa 31878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 128420 - 128384
Alignment:
Q  4 catgaatatgcataaccaagcaattattcatcaatca 40  Q
    |||||||||||||| |||| |||||||||||||||||    
T  128420 catgaatatgcatacccaatcaattattcatcaatca 128384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 8943 - 9215
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  8943 cataacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataat 9042  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||  | |||||||||||||||||||||| ||||||    
T  9043 tgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcacaaatggagcacgaatttagcaacaattttccata 9142  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    | |||||||| |||||  ||||||||||||| || |||| |||||||||||||| ||||||||||||||||||    
T  9143 agcaaaattcgtacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 8889 - 8925
Alignment:
Q  4 catgaatatgcataaccaagcaattattcatcaatca 40  Q
    |||||||||||||| ||||||||||||||||||||||    
T  8889 catgaatatgcatacccaagcaattattcatcaatca 8925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 41794 - 42066
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    |||| |||||||||||||||||||| | |||||| || |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  41794 catagcatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatt 41893  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||| ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  41894 tgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccata 41993  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    | |||||||||||||| |||||||||||| | || |||  |||||||||||||| || |||||||||||||||    
T  41994 agcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 6e-90; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 39 - 308
Target Start/End: Complemental strand, 14626316 - 14626045
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||| ||||||||||| ||||| ||| ||||||||||||| |||||||||||||  ||||||||| | ||||||||||||||||||| |    
T  14626316 cataacatcaattgagcaagaatcaaatctcaagttaacaacaacttagcataattcaccaattgcacacaattttcataacttatcatttttacatatt 14626217  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||| |||||||||||    
T  14626216 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccata 14626117  T
Q  238 atcaaaattcatacaatatttgaaaatttg-caagtgaaaatgattatgataaaaactaacccccttacctt 308  Q
    |||| |||||| |||| |||||| ||||||  ||||||| |||||| |||||| ||||||||||||||||||    
T  14626116 atcacaattcaaacaacatttgagaatttgtaaagtgaagatgattgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 23153512 - 23153786
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||| ||||||||||||||||||| | |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| | | || |    
T  23153512 cataatatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatt 23153611  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||     
T  23153612 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagaaacaattatccatt 23153711  T
Q  238 at--caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||   ||||||||||||| |||||||||||| | || |||  ||||||||||| || ||||||||||||||||||    
T  23153712 atgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 40 - 236
Target Start/End: Complemental strand, 1657944 - 1657748
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattg 139  Q
    |||||||||| ||||||||||||| | |||||||  ||| ||||||||||||| || ||||||||||||||||| | |||||  ||||||||||||||||    
T  1657944 ataacatcaactgaacaagaatcataactcaattcacaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattg 1657845  T
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  1657844 aacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcacagttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 35009599 - 35009439
Alignment:
Q  76 caacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 175  Q
    ||||||| |||||||||||||||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35009599 caacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 35009500  T
Q  176 caattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    |||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  35009499 caattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 40 - 224
Target Start/End: Complemental strand, 1650290 - 1650105
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||||||| ||||||||||| ||||| ||| | | |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||    
T  1650290 ataacatcaattgagcaagaatcaaatctcaaattaaccataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatattt 1650191  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||| |||||    
T  1650190 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagagcacgaatctagca 1650105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 51 - 236
Target Start/End: Original strand, 15862549 - 15862734
Alignment:
Q  51 tgaacaagaatcaaacctcaattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatt 150  Q
    ||||||||||||| | |||||||  ||| ||||||||||||| || ||||||||||||||||| | |||||  ||||| ||||||||||||||||| |||    
T  15862549 tgaacaagaatcataactcaattcacaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatt 15862648  T
Q  151 tcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  15862649 tcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 25175627 - 25175815
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||| | ||||| ||| ||||||||||| | ||||||||||||| |||||||| || | |||||||||||||| ||||    
T  25175627 tcataacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcata 25175726  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||  ||||  |||||||||||||||||    
T  25175727 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 27654171 - 27653983
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| | |||||||||||| | ||||| ||| ||||||||||| | ||||||||||||| |||||||| || | |||||||||||||| ||||    
T  27654171 tcataacatcattggaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcata 27654072  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      |||||||||||||||||||||||| |||||| || ||||||||||||||||||| |||| ||| ||||  |||||||||||||||||    
T  27654071 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 29665900 - 29666137
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaa 99  Q
    ||||||||||||||||| |||||  || ||||| | |  | ||||||||||||||| |||||| | |||| || | ||||||||||||||||||||||||    
T  29665900 atccatgaatatgcatacccaagtcatgattcacccacaacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaa 29665999  T
Q  100 ttgagcacaatttttacaacttatcatttttacataattg--aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 197  Q
    ||||| |||||||  | |||||  ||||| | |||| ||   |||||||||||||||| ||||||||||||||||||||||||||| ||||  || |||     
T  29666000 ttgagtacaatttc-ataacttgacatttatgcatactttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataa 29666098  T
Q  198 cataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||| |||| ||||||||||||||| ||||||||||||||    
T  29666099 catcacagctagagcacgaatttaacaacaattatccat 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 16825942 - 16825752
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| |||||||||||||| | ||||| ||| |||||| |||| | |||| |||||||| |||||||| || | |||||||||||||| ||||    
T  16825942 tcataacatcatttgaacaagaatcacaactcaaattaacaacaaattaggagaaatccaccaatttagcacaatcttcataacttatcatttttgcata 16825843  T
Q  136 attgaacatgtaatttcaccaacaatca--tacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
      |||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  16825842 tatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 19983226 - 19983144
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  19983226 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 35015091 - 35015009
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  35015091 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 27751603 - 27751688
Alignment:
Q  151 tcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||||||||||| ||| ||||||||    
T  27751603 tcaccaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 18583638 - 18583720
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||| ||||    
T  18583638 aaatgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 18629692 - 18629608
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||||||| ||||||||| |||||||||||| | | |||||||||||||||    
T  18629692 ttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 18629608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 1556173 - 1556263
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  1556173 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 1556263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 16232060 - 16232150
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||||||||||||    
T  16232060 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 16232150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 17083298 - 17083200
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||  ||||||||||||||  || ||||||||| |||||||||||| |||||||||||| | | |||||||||||||    
T  17083298 tatcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaattcatgcattcaaacatatcatcataattagagcacgaat 17083200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 27740907 - 27740977
Alignment:
Q  43 acatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaattt 112  Q
    |||||||||||||| |||||| | ||||||| | |||| ||||||||||||||||||||||||||||||||    
T  27740907 acatcaattgaacatgaatcatatctcaattcaacaacgacttagcaaaattcaccaattgagcacaattt 27740977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 29605614 - 29605696
Alignment:
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    |||||||||||||||||||||||  || |||||||||  ||||||||||| |||||||||||  | | |||||||||||||||    
T  29605614 tgaacatgtaatttcaccaacaacaattcaattatcactaattcatgcattcaaacatatcaccataattagagcacgaattt 29605696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 16887876 - 16887792
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| || |||||||||||   | ||||||||||||||| ||||||||||||||||| || | |||||||||||||||||    
T  16887876 ttgaacatgcaaattcaccaacaacagttcaattatcatcaatttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16825998 - 16825956
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  16825998 atccatgaatatgcataacaaagcaattattcatcaatcataa 16825956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 17557101 - 17557012
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatttagcaac 226  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||| | | |||||||||||||||| ||||    
T  17557101 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcat-caaacatatcatcataattagagcacgaatttaacaac 17557012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 18086911 - 18086821
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||||||||||    
T  18086911 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaatt 18086821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25175571 - 25175613
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  25175571 atccatgaatatgcatacccaagcaattattcatcaatcataa 25175613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27654227 - 27654185
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  27654227 atccatgaatatgcatacccaagcaattattcatcaatcataa 27654185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 35136096 - 35136013
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| || ||||| |||||  || ||||||||||||||| ||||||||||||||||||||   |||||||||||||||||    
T  35136096 ttgaacatgcaaattcac-aacaacaattcaattatcatcaatttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 13620882 - 13620792
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||| ||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||||||||||    
T  13620882 aacatgcaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaatt 13620792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 22225826 - 22225736
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  22225826 aacatgtaatttcacccataaacataccataatcatcaattcatgcacaagaaaatagcatcacagaaagagcacgaatttaacaacaatt 22225736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 23977937 - 23978027
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||| ||||||    
T  23977937 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaatt 23978027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  241 aaaattcatacaatatttgaaaatttgcaag-tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||| |||  |||  ||||||||||| || ||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 22361849 - 22361765
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||| ||||||  || ||||||||| ||||| ||||||| |||||||||||| | | ||||||||| |||||    
T  22361849 ttgaacatgaaatttcagcaacaacaattcaattatcaacaatttcatgcattcaaacatatcatcataattagagcacaaattt 22361765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 33324856 - 33324939
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| || ||||| |||||  || ||||||||| ||||| ||||||||||||||||||||   |||||||||||||||||    
T  33324856 ttgaacatgcaaattcac-aacaacaattcaattatcaacaatttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 18381767 - 18381684
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||||| |||||||||||||| ||| ||||||||| ||| |||||| || |||| ||||||| | | ||||||||| ||||    
T  18381767 ttgaacatgaaatttcaccaacaaccattcaattatcaacaacttcatgtattcaaaaatatcatcataattagagcacaaatt 18381684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 10488867 - 10488957
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  10488867 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 10488957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 16376461 - 16376371
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  16376461 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 16376371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 16383785 - 16383695
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  16383785 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 16383695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 18002429 - 18002395
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  18002429 aaatgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 19610186 - 19610276
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || | |||| ||||||||| |  || ||| ||| ||||  |||||||||||||||||| ||||    
T  19610186 aacatgtaatttcacccacaaacataccataaccatcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataatt 19610276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 23995245 - 23995279
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  23995245 aaatgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 26090057 - 26090091
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  26090057 aaatgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 310
Target Start/End: Complemental strand, 1650053 - 1650020
Alignment:
Q  277 atgattatgataaaaactaacccccttaccttaa 310  Q
    |||||||||||||| |||||||||||||||||||    
T  1650053 atgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 308
Target Start/End: Original strand, 4991394 - 4991427
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctt 308  Q
    |||||||||||||||| |||||||||||||||||    
T  4991394 aaatgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 15079792 - 15079709
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattta 221  Q
    ||||||||| |||||||| |||||  || |||||||| |||| ||||||||||||| ||||||||   ||||||||||||||||||    
T  15079792 ttgaacatgcaatttcac-aacaacaattcaattatcctcaacttcatgcatacaa-catatcatcctagttagagcacgaattta 15079709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 22361676 - 22361619
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| |  |||  | |||||||||||||||||||    
T  22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctccta 22361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 25651400 - 25651461
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 197  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  25651400 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 25651461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 16232199 - 16232231
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  16232199 atgattatgataataactaacccccttacctta 16232231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 19610325 - 19610357
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  19610325 atgattatgataataactaacccccttacctta 19610357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 22251648 - 22251564
Alignment:
Q  146 taatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||| | || ||||| || |||||||||||||||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  22251648 taatttcacccataaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 22251564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 33538453 - 33538370
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||| ||| ||||| ||||||| |||| ||||||  | |||||||||||||||||    
T  33538453 ttgaacatgcaatttcaccaacaacaattcaatt-tcaccaatttcatgcattcaaatatatcaccatagttagagcacgaattt 33538370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 166; Significance: 9e-89; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 40 - 306
Target Start/End: Original strand, 19272 - 19543
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    ||||||||||||||||| |||||| | ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  19272 ataacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatattt 19371  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataa 238  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |    
T  19372 gaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccatta 19471  T
Q  239 t--caaaattcatacaatatttgaaaatttgc--aagtgaaaatgattatgataaaaactaacccccttacc 306  Q
    |   ||||||||||||| |||||||||||| |  || | |  ||||||||||| || |||||||||||||||    
T  19472 tgcaaaaattcatacaacatttgaaaatttacaaaaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 40 - 236
Target Start/End: Original strand, 21356 - 21553
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    ||||||||||||||||| |||||| | ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  21356 ataacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatattt 21455  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  21456 gaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 161; Significance: 8e-86; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 38 - 309
Target Start/End: Complemental strand, 247641 - 247366
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataa 136  Q
    |||||||||||||||||||||||||| | |||||| || |||||||||||||||||| ||||||||||||||||||| |||||||||||||| | | ||     
T  247641 tcataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctat 247542  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  247541 ttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaattatccat 247442  T
Q  237 aat--caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
     ||   ||||||||||||| |||||||||||| | || |||  |||||||||||||| ||||||||||||||||||    
T  247441 tatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 34246 - 34156
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| | | ||||  |||||||||||||||||||||||    
T  34246 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcttcacagcaagagcacgaatttagcaacaatt 34156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 161; Significance: 8e-86; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 171970 - 172242
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||  | ||||||| | | |||||||||||||||||||||||| ||||||||||| |||||||||||||| | | || |    
T  171970 cataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatt 172069  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| ||||||||||| |||||||||    
T  172070 tgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccata 172169  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||||||| |||||| |||||||||||| | || |||  |||||||||||||| ||||||||||||||||||    
T  172170 atcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 177673 - 177945
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||  | ||||||| | | |||||||||||||||||||||||| ||||||||||| |||||||||||||| | | || |    
T  177673 cataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatt 177772  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| ||||||||||| |||||||||    
T  177773 tgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccata 177872  T
Q  238 atcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||||||| |||||| |||||||||||| | || |||  |||||||||||||| ||||||||||||||||||    
T  177873 atcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 158; Significance: 5e-84; HSPs: 4)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 26613 - 26340
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||| | |||| | || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |    
T  26613 cataacatcaattgaacaagaatcataactcattctaacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatt 26514  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||| ||||||||||||||||| | |||| |||||||||||||||||||||||| |||     
T  26513 tgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatacatt 26414  T
Q  238 at-caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||  ||||||||||||| |||||||||||| | || |||  |||||||||||||| ||||||||||||||||||    
T  26413 atgaaaaattcatacaacatttgaaaatttacaaaatgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 8340 - 8180
Alignment:
Q  76 caacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 175  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  8340 caacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcac 8241  T
Q  176 caattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  8240 caattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 7109 - 7025
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||  |||||||| |||||  || ||||||||| ||| ||||||||| |||||||||||| | | |||||||||||||||    
T  7109 ttgaacattaaatttcactaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataattagagcacgaattt 7025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 6934 - 6877
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactccta 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 156; Significance: 8e-83; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 39 - 299
Target Start/End: Complemental strand, 5259 - 4996
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||| | |||| | || ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  5259 cataacatcaattgaacaagaatcataactcattctaacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatt 5160  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||| ||| ||||||||||||||||||||||||     
T  5159 tgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcacagttggagtacgaatttagcaacaattatccatt 5060  T
Q  238 at-caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaaccc 299  Q
    ||  ||||||||||||| |||||||||||| | || ||| ||||||||||||||| ||||||||    
T  5059 atgaaaaattcatacaacatttgaaaatttacaaaatgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 5313 - 5277
Alignment:
Q  4 catgaatatgcataaccaagcaattattcatcaatca 40  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  5313 catgaatatgcatacccaagcaatgattcatcaatca 5277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 156; Significance: 8e-83; HSPs: 5)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 39 - 262
Target Start/End: Original strand, 148786 - 149012
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  148786 cataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatt 148885  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||||||||||| ||     
T  148886 tgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacaaatttaacaacaattatcaatt 148985  T
Q  238 at--caaaattcatacaatatttgaaa 262  Q
    ||   ||||||||||||| ||||||||    
T  148986 atgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 40 - 235
Target Start/End: Original strand, 8915 - 9111
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||||||||||  ||||| | ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  8915 ataacatcaattgaacattaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataatt 9014  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatcca 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||    
T  9015 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatcca 9111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 210 - 309
Target Start/End: Original strand, 146838 - 146938
Alignment:
Q  210 agcacgaatttagcaacaattatccataatcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctt 308  Q
    |||| |||||||| ||||||||||||||| |||||||||||||| |||||||||||| | || |||  |||||||||||||| |||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
Q  309 a 309  Q
    |    
T  146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 85679 - 85779
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| |||||||||  ||||||||||| | | |||||||||||||    
T  85679 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcat-taaacatatcatcataattagagcacgaat 85777  T
Q  219 tt 220  Q
    ||    
T  85778 tt 85779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 53509 - 53573
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaat-tcatgcatacaaacatatcat 200  Q
    ||||||||| ||||||||||||||  || ||||||||| |||| |||||||| ||||||||||||    
T  53509 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatatcatgcattcaaacatatcat 53573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 155; Significance: 3e-82; HSPs: 3)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 40 - 233
Target Start/End: Original strand, 48253 - 48447
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | ||    
T  48253 ataacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacattt 48352  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatc 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  48353 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaattatc 48447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 278 - 357
Target Start/End: Original strand, 20493 - 20572
Alignment:
Q  278 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||| ||| ||||||||| ||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 48195 - 48234
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatca 40  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  48195 atccatgaatatgcatacccaggcaattattcatcaatca 48234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 123362 - 123087
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||| | || ||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| | | || |    
T  123362 cataacatcaattgaacaagaatcataacttaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatt 123263  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||     
T  123262 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccatt 123163  T
Q  238 at--caaaattcatacaatatttgaaaatttgc--aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||   ||||||||||||| ||||| |||||| |  || | |  ||||||||| | || ||||||||||||||||||    
T  123162 atgcaaaaattcatacaacatttgcaaatttacaaaaattatgatgattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 149; Significance: 1e-78; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 39 - 310
Target Start/End: Complemental strand, 37111 - 36836
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    |||||| |||||||||||||| ||| | ||||||  | | |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |    
T  37111 cataacgtcaattgaacaagattcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatt 37012  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccata 237  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||     
T  37011 tgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccatt 36912  T
Q  238 at--caaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttaccttaa 310  Q
    ||   ||||||||||||| |||||||| ||  | || |||  |||||||||||||| |||||||||||||||||||    
T  36911 atgcaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 278 - 357
Target Start/End: Complemental strand, 15398 - 15319
Alignment:
Q  278 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| ||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 149; Significance: 1e-78; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 39 - 230
Target Start/End: Original strand, 107812 - 108004
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || | |    
T  107812 cataacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatt 107911  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  107912 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaatt 108004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 38 - 220
Target Start/End: Complemental strand, 64716 - 64527
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| ||| ||||||||||| | |||||||||||||||||||||| || | |||||||||||||||||||    
T  64716 tcataacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacata 64617  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatc-----aattcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
     || |||||||||||||||||||||||||||||| ||||||     |||||||||||| ||||||| ||| ||||  |||||||||||||    
T  64616 tttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataacatcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 89915 - 89863
Alignment:
Q  170 tatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattta 221  Q
    ||||||||||| |||||||||||||||||||| | |||| |||||||||||||    
T  89915 tatcatcaatttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 107755 - 107794
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatca 40  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  107755 atccatgaatatgcaaacccaagcaattattcatcaatca 107794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 40 - 309
Target Start/End: Original strand, 272091 - 272362
Alignment:
Q  40 ataacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataatt 138  Q
    |||||| ||||||||||||||||| | ||||||  | | |||||||||||||||||||||||| ||||||||||| |||||||||||||| | | || ||    
T  272091 ataacaccaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctattt 272190  T
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataa 238  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| |||||| ||| ||| ||||||||| | ||||||||||    
T  272191 gaacatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataa 272290  T
Q  239 tcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||| ||||||||||||||||||| | || |||  |||||||||||||| ||||||||||||||||||    
T  272291 tcaaaatttatacaatatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 90 - 307
Target Start/End: Complemental strand, 51328 - 51110
Alignment:
Q  90 aattcaccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac 189  Q
    |||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51328 aattcaccaattgagcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac 51229  T
Q  190 aaacatatcataacagttagagcacgaatttagcaacaattatccataatcaaaattcatacaatatttgaaaatttgc-aagtgaaaatgattatgata 288  Q
    ||| ||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | || |||  ||||||||||||    
T  51228 aaatatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 51129  T
Q  289 aaaactaacccccttacct 307  Q
    || ||||| | ||||||||    
T  51128 aagactaatctccttacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 13609 - 13769
Alignment:
Q  76 caacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 175  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609 caacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 13708  T
Q  176 caattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  13709 caattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 42675 - 42754
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  42675 aaatgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 41751 - 41911
Alignment:
Q  76 caacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 175  Q
    ||||||| |||||||||||||||||||| ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41751 caacaacatagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 41850  T
Q  176 caattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  41851 caattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 39 - 236
Target Start/End: Complemental strand, 732 - 534
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaat-taccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    ||||||||||||| ||||||||||| | || ||| || ||  ||||||||||||||||||||||||| |||||||| |||||| ||||||| | | || |    
T  732 cataacatcaattaaacaagaatcataacttaatctaacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatt 633  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  632 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 126; Significance: 6e-65; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 76 - 309
Target Start/End: Complemental strand, 89614 - 89378
Alignment:
Q  76 caacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 175  Q
    |||||||  |||| |||||||||||||||||||||||| ||||||||| |||| | | || |||||||||||||||||||||||||||||||||||||||    
T  89614 caacaacaaagcataattcaccaattgagcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcat 89515  T
Q  176 caattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccataat--caaaattcatacaatatttgaaaatttgc-aagt 272  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||   |||||||||| || |||||||||||| | || |    
T  89514 caattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaat 89415  T
Q  273 gaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||  ||||| ||||| || ||||||||||||||||||    
T  89414 gatgatgatcatgatgaagactaacccccttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 309
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  185 catacaaacatatcataacagttagagcacgaatttagcaacaattatccataat--caaaattcatacaatatttgaaaatttgc-aagtgaaaatgat 281  Q
    |||||||| ||||||| |||||| ||||||||||||||||| |||||||||| ||   ||||||||||||| |||||||||||| | || |||  |||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  282 tatgataaaaactaacccccttacctta 309  Q
     ||||| || ||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 79704 - 79786
Alignment:
Q  139 gaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||| |||||||||| |||  |  ||||||||||||||| |||||||||||||||||||| | |||||| ||||||||||    
T  79704 gaacatgcaatttcaccaccaacaactcaattatcatcaatttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 308
Target Start/End: Original strand, 130878 - 130911
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctt 308  Q
    |||||||||||||||| |||||||||||||||||    
T  130878 aaatgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 39 - 220
Target Start/End: Complemental strand, 9535 - 9353
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    |||||||||| |||| ||||||||||| ||||| ||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |    
T  9535 cataacatcatttgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatt 9436  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  | |||||||||||    
T  9435 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaaaagcacgaattt 9353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 39 - 220
Target Start/End: Complemental strand, 16433 - 16251
Alignment:
Q  39 cataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    |||||||||| |||| ||||||||||| ||||| ||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |    
T  16433 cataacatcatttgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatt 16334  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  | |||||||||||    
T  16333 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaaaagcacgaattt 16251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 236
Target Start/End: Complemental strand, 34658 - 34460
Alignment:
Q  40 ataacatcaattgaa-caagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    |||||||||||| || || |||||| | ||||||| | |||||||||||||||||||||| |||||| |||||||| |||||||   ||||||||| |||    
T  34658 ataacatcaattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaat 34559  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  34558 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 40 - 230
Target Start/End: Original strand, 3028 - 3220
Alignment:
Q  40 ataacatcaattgaa-caagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataat 137  Q
    |||||||||||| || || |||||| | ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  3028 ataacatcaattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataat 3127  T
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||  |||||||||||||||||| ||||    
T  3128 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaagaatt 3220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 38 - 230
Target Start/End: Complemental strand, 5403 - 5210
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataa 136  Q
    |||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||| ||||||||| | |||||||||||||||||||     
T  5403 tcataacatcaattgaacaagaatcaaatctcaaattaacaacaactcagcaaaattcaccaattgaacacaattttcataacttatcatttttacatat 5304  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |  || ||| ||| ||||  |||||||||||||| ||| ||||    
T  5303 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaagaatt 5210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 70 - 224
Target Start/End: Complemental strand, 13479 - 13325
Alignment:
Q  70 aattaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaat 169  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13479 aattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaat 13380  T
Q  170 tatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagca 224  Q
    ||||||||||||||||||||||||||| ||| ||| | ||||||||||| |||||    
T  13379 tatcatcaattcatgcatacaaacataacatcacactaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 38 - 232
Target Start/End: Original strand, 5592 - 5788
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| ||| ||||||||||| | |||||||||||||||||||||| || |  ||||||||||||||||||    
T  5592 tcataacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcatgacttatcatttttacata 5691  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattat 232  Q
     || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | |||| ||||||||||||||||||||||||    
T  5692 tttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaaagttggagcacgaatttagcaacaattat 5788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 113; Significance: 4e-57; HSPs: 4)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 38 - 308
Target Start/End: Complemental strand, 21303 - 21031
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataa 136  Q
    ||||||||||||||||||||||||| || ||||| ||| ||||||||||| |||||||||||||||||| |||| || | |||||||||||||||||||     
T  21303 tcataacatcaattgaacaagaatccaatctcaaattaacaacaacttaggaaaattcaccaattgagctcaatcttcataacttatcatttttacatat 21204  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||| ||||||||||| ||| |||   |||||||||||||||||| |||| | |||    
T  21203 ttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaacaagagcacgaatttagcaagaattgttcat 21104  T
Q  237 -aatcaaaattcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttacctt 308  Q
     || | |  ||||||||| ||  ||||||    || || | ||||||||||||| ||||||||||||||||||    
T  21103 caacccattttcatacaacatgagaaaatgcaaaattgtacatgattatgataataactaacccccttacctt 21031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 38 - 308
Target Start/End: Complemental strand, 14248 - 13977
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataa 136  Q
    ||||||||| ||||||||||||||| || ||||| ||| ||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||     
T  14248 tcataacattaattgaacaagaatccaatctcaaattatcaacaacttaggaaaattcaccaattgagcacaatcttcataacttatcatttttacatat 14149  T
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat 236  Q
    || ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||| ||||  |||||||| ||||||||| |||| | |||    
T  14148 ttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatcacagcaagagcacg-atttagcaagaattgtgcat 14050  T
Q  237 -aatcaaaattcatacaatatttgaaaatttgcaagtgaaaatgattatgataaaaactaacccccttacctt 308  Q
     || | |  ||||||||| ||  ||||||    || || | ||||||||||||| ||||||||||||||||||    
T  14049 caacccattttcatacaacatgagaaaatgcaaaattgtacatgattatgataataactaacccccttacctt 13977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14304 - 14256
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataacatcaa 49  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  14304 atccatgaatatgcaaactcaagcaattattcatcaatcataacatcaa 14256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21359 - 21311
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataacatcaa 49  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  21359 atccatgaatatgcaaactcaagcaattattcatcaatcataacatcaa 21311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 38 - 230
Target Start/End: Original strand, 3786 - 3980
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcattttt-acata 135  Q
    |||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||  ||||||||  | |||||||||||||| |||||    
T  3786 tcataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacata 3885  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| |  || ||| ||| |||   |||||||||||||||||| ||||    
T  3886 tttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaagaatt 3980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 220
Target Start/End: Original strand, 99 - 283
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||||| |||| | ||||| ||| ||||||||||| | |||||||||||||||||||||| |  | |||||||||||||||||||    
T  99 tcataacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatatacataacttatcatttttacata 198  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
     || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||  |||||||||||||    
T  199 tttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 30415 - 30497
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||| ||||| ||| ||||||||||| ||| ||||| ||||    
T  30415 aaatgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatgattct 30497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 97; Significance: 1e-47; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 220
Target Start/End: Original strand, 43061 - 43245
Alignment:
Q  38 tcataacatcaattgaacaagaatcaaacctcaa-ttaccaacaacttagca-aaattcaccaattgagcacaatttttacaacttatcatttttacata 135  Q
    ||||||||||| ||||||| |||||| | ||||| ||| ||||||||||| | ||||||||||||| |||||||| || | |||||| ||||||||||||    
T  43061 tcataacatcacttgaacacgaatcacatctcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacata 43160  T
Q  136 attgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||  |||||||||||||    
T  43161 tttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataacatcccagcaagagcacgaattt 43245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 43005 - 43047
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataa 43  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  43005 atccatgaatatgcaaacccaagcaattattcatcaatcataa 43047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 39271 - 39361
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  39271 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 39361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 1439 - 1304
Alignment:
Q  89 aaattcaccaattgagcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 188  Q
    |||||||||||||||||||||| || | |||||||||||||| ||||  ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  1439 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 1340  T
Q  189 caaacatatcataacagttagagcacgaatttagca 224  Q
    |||||||| ||| ||||  |||||||||||||||||    
T  1339 caaacataacatcacagcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 4 - 236
Target Start/End: Original strand, 3219 - 3453
Alignment:
Q  4 catgaatatgcataaccaagcaattattcatcaatcataacatcaattgaacaagaatcaaa---cctcaattaccaacaacttagcaaaattcaccaat 100  Q
    ||||||||||| || |||| |||| |||||||||||| |||||||||||||||| ||||| |   ||||  | | ||||||||||||||||||||||| |    
T  3219 catgaatatgcctacccaaacaatgattcatcaatcacaacatcaattgaacaataatcacatatcctc--tcaacaacaacttagcaaaattcaccatt 3316  T
Q  101 tgagcacaatttttacaacttatcatttttacataattg--aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatc 198  Q
    |||| |||||||  | |||||   |||| |||||| ||   || |||||||||||||||||||||||||| |||||| ||||||||||||||||| || |    
T  3317 tgagtacaatttc-ataacttgatatttatacatactttgaaatatgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaac 3415  T
Q  199 ataacagttagagcacgaatttagcaacaattatccat 236  Q
    || |||| |||||||||||||||||| |||||||||||    
T  3416 atcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 26926 - 27058
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  26926 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 27025  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  27026 agttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 232
Target Start/End: Original strand, 22671 - 22799
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  22671 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 22770  T
Q  204 agttagagcacgaatttagcaacaattat 232  Q
    |||| ||||||||||||||||||||||||    
T  22771 agttggagcacgaatttagcaacaattat 22799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 22852 - 22889
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  22852 tgaacatgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 27108 - 27144
Alignment:
Q  273 gaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||| |||||||||||||| ||||||||||||||||||    
T  27108 gaacatgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 1714 - 1582
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  1714 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 1615  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  1614 agttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 1533 - 1496
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  1533 tgaacatgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 85; Significance: 2e-40; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 37198 - 37066
Alignment:
Q  104 gcacaatttttacaacttatcatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataac 203  Q
    |||||||||| | ||||| ||||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  37198 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 37099  T
Q  204 agttagagcacgaatttagcaacaattatccat 236  Q
    |||| ||||||||||||||||||||||||||||    
T  37098 agttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 41630 - 41712
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  41630 aaatgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 37017 - 36980
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  37017 tgaacatgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 76 - 233
Target Start/End: Complemental strand, 56260 - 56102
Alignment:
Q  76 caacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattgaa--catgtaatttcaccaacaatcatacaattatc 173  Q
    ||||||||||||||||||||||| |||||||||||||  | |||||  ||||| |||||| || ||  |||||||||||| | |||||||||||||||||    
T  56260 caacaacttagcaaaattcaccatttgagcacaatttc-ataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatc 56162  T
Q  174 atcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatc 233  Q
    ||||| ||||||| || || ||| ||| |||||||||||||||||||| |||||||||||    
T  56161 atcaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaattatc 56102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 31214 - 31132
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  31214 aaatgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 69; Significance: 7e-31; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 277 - 357
Target Start/End: Complemental strand, 166196 - 166116
Alignment:
Q  277 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  166196 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 162110 - 162036
Alignment:
Q  277 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctat 351  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  162110 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 350
Target Start/End: Complemental strand, 116486 - 116410
Alignment:
Q  274 aaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  116486 aaaatgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
Q  277 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctat 351  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
Q  277 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctat 351  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 80185 - 80267
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  80185 aaatgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatgattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 232
Target Start/End: Original strand, 45098 - 45290
Alignment:
Q  42 aacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattg- 139  Q
    ||||||||| ||||| |||||| | |||| || | ||||||| || |||||||||||||||||| |||||||  | |||||  ||||| |||||| ||      
T  45098 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattcaccaattgagtacaatttcaa-aacttgacatttatacatactttg 45196  T
Q  140 -aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattat 232  Q
     |||||||||||||||| |||||||||||||||||||||||||||||| |  || ||| ||| |||   || ||||||||||| ||||||||||    
T  45197 aaacatgtaatttcacccacaatcatacaattatcatcaattcatgcacatcaaaatagcatcacaacaagggcacgaatttaacaacaattat 45290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 232
Target Start/End: Original strand, 54484 - 54676
Alignment:
Q  42 aacatcaattgaacaagaatcaaacctcaatt-accaacaacttagcaaaattcaccaattgagcacaatttttacaacttatcatttttacataattg- 139  Q
    ||||||||| ||||| |||||| | |||| || | ||||||| || |||||||||||||||||| |||||||  | |||||  ||||| |||||| ||      
T  54484 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattcaccaattgagtacaatttc-ataacttgacatttatacatactttg 54582  T
Q  140 -aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattat 232  Q
     |||||| ||||||||| |||||||||||||||||||||||||||||| |  || ||| ||| ||||  ||  |||||||||| ||||||||||    
T  54583 aaacatgcaatttcacccacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaaggacacgaatttaacaacaattat 54676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 277 - 357
Target Start/End: Complemental strand, 384 - 304
Alignment:
Q  277 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||||||| | ||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  384 atgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 304  T

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Target: scaffold1164 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 278 - 357
Target Start/End: Original strand, 1701 - 1780
Alignment:
Q  278 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||| ||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

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Target: scaffold0122 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 278 - 357
Target Start/End: Complemental strand, 19881 - 19802
Alignment:
Q  278 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||| ||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

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Target: scaffold0122; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 278 - 357
Target Start/End: Complemental strand, 24185 - 24106
Alignment:
Q  278 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgcttct 357  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||| ||| ||||||||| ||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 24106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 140 - 232
Target Start/End: Complemental strand, 10427 - 10335
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattat 232  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||||||| ||||  |||||||||||||||||||||||||    
T  10427 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagcaagagcacgaatttagcaacaattat 10335  T

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Target: scaffold0123 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 8173 - 8257
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| || |||||||||||  || ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  8173 ttgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

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Target: scaffold0876 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 94 - 164
Alignment:
Q  278 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcc 348  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

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Target: scaffold0310 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  278 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 352  Q
    |||||||||| || |||||||||||||||||||||||| || ||||||| ||| ||||||||||| |||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  278 tgattatgataaaaactaacccccttaccttaattatc 315  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 107 - 57
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataacatcaatt 51  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  107 atccatgaatatgcaaacccaagcaattattcatcaatcataacatcaatt 57  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 48522 - 48572
Alignment:
Q  1 atccatgaatatgcataaccaagcaattattcatcaatcataacatcaatt 51  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  48522 atccatgaatatgcaaacccaagcaattattcatcaatcataacatcaatt 48572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 1449 - 1348
Alignment:
Q  121 tatcatttttacataatt-gaacatgtaatttcaccaacaatcatacaattatcatcaattc-atgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| || || |||| ||||||||||||||  || ||||||||| |||||  ||||||||||||||||||| | |||||||||||||||    
T  1449 tatcattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcatagttagagcacgaat 1350  T
Q  219 tt 220  Q
    ||    
T  1349 tt 1348  T

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Target: scaffold0409; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 9704 - 9603
Alignment:
Q  121 tatcatttttacataatt-gaacatgtaatttcaccaacaatcatacaattatcatcaattc-atgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| || || |||| ||||||||||||||  || ||||||||| |||||  ||||||||||||||||||| | |||||||||||||||    
T  9704 tatcattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcatagttagagcacgaat 9605  T
Q  219 tt 220  Q
    ||    
T  9604 tt 9603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 54039 - 54132
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    ||||||||||||||||||| |||| ||||| || |||||||||||||||| |  || | | ||| ||||| ||||||||||||||||| |||||    
T  54039 ttgaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaacagcatcacagtaagagcacgaatttagcatcaatt 54132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 2688 - 2772
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||| ||||| ||||||| |||||||||||| | | |||||||||||||||    
T  2688 ttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatccaaacatatcatcataattagagcacgaattt 2772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 22506 - 22422
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| || |||||||||||  ||  |||||||||||||| |||||||||||||||||||| | | |||||||||||||||    
T  22506 ttgaacatgcaaattcaccaacaacaattaaattatcatcaatttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 22513 - 22429
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| || |||||||||||  || ||||||||||||||| ||||||||||||||||| ||   |||||||||||||||||    
T  22513 ttgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatattatcctagttagagcacgaattt 22429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 3578 - 3671
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    ||||||||||||||||||| |||||||||| || |||||||||||||| | |  || | | ||| ||||| ||||||| ||||||||| |||||    
T  3578 ttgaacatgtaatttcacccacaatcataccataatcatcaattcatggacaagaaaacaacatcacagtaagagcactaatttagcatcaatt 3671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 140 - 309
Target Start/End: Complemental strand, 1663 - 1492
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaattatccat-aa 238  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| ||| ||||  || |||||| ||||||||||||| | ||| ||    
T  1663 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagtgcacgattttagcaacaattgttcatcaa 1564  T
Q  239 tcaaaattcatacaatatttgaaaatttgc---aagtgaaaatgattatgataaaaactaacccccttacctta 309  Q
     | |  ||||||||| ||  |||||  |||   || |||| ||||||||||||| |||||||||||||||||||    
T  1563 cccattttcatacaacatgagaaaa--tgcaaaaattgaacatgattatgataataactaacccccttacctta 1492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 76931 - 76847
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||| | | |||||||| ||||||    
T  76931 ttgaacatgaaatttcaccaacaacaattcaattatcaacaatttcatgcattcaaacatatcatcataattagagcatgaattt 76847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 76756 - 76699
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    |||||||||||||||||||||||  ||| |  |||| | |||||||||||||||||||    
T  76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctccta 76699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 37; Significance: 0.000000000008; HSPs: 5)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 104707 - 104623
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattca-tgcatacaaacatatcataacagttagagcacgaattt 220  Q
    |||||| || || |||||||||||  || ||||||||||||||| | |||||||||||||||||| | |||||||||| ||||||    
T  104707 ttgaacctgcaaattcaccaacaacaattcaattatcatcaatttaatgcatacaaacatatcatcatagttagagcatgaattt 104623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 104552 - 104477
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||| ||  ||||||| ||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  104552 aaatgattatgatgaattctaacccacttaccttaattagcacaaattcttagcccaagcttcactttagctccta 104477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 55902 - 55936
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  55902 aaatgattatgataaagactaacccccttacctta 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 108109 - 108075
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  108109 aaatgattatgataaagactaacccccttacctta 108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 93857 - 93773
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| |||||| | ||||| ||| |||||||||  || |||||||||||| ||||||||| | | || ||||||||||||    
T  93857 ttgaacatgaaatttctctaacaaccattcaattatcaaaaacttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 1438 - 1363
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||| ||  ||||||||||||||| ||||||| |||| |  |||||| ||||||||||||| |||||    
T  1438 aaatgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttccta 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 6824 - 6907
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||| | | ||| ||||||||||    
T  6824 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataattatagcacgaatt 6907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 1617 - 1546
Alignment:
Q  150 ttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    |||||||||||  || |||||||||  |||| |||||||||||||||||||| | |||||||||||||||||    
T  1617 ttcaccaacaacaattcaattatcactaatttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 8762 - 8691
Alignment:
Q  150 ttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    |||||||||||  || |||||||||  |||| |||||||||||||||||||| | |||||||||||||||||    
T  8762 ttcaccaacaacaattcaattatcactaatttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 1602 - 1512
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||||||| |  || ||| ||| |||   |||||||||||||||||||||||    
T  1602 aacatgtaatttcacccataaacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaatt 1512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 1463 - 1431
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  1463 atgattatgataataactaacccccttacctta 1431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 10854 - 10908
Alignment:
Q  166 caattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||||||||||| |||||||||||||||||||| | || |||||||||||||    
T  10854 caattatcatcaatttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

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Target: scaffold0150 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 28699 - 28781
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaat 218  Q
    |||||||| |||||||||||||||  || || |||||| ||| ||||||||| |||||||||||| | | |||||||||||||    
T  28699 ttgaacatataatttcaccaacaacaattcagttatcaacaagttcatgcattcaaacatatcatcataattagagcacgaat 28781  T

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Target: scaffold0107 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 39814 - 39904
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| ||||  |||| || |||||||||||||||| |  || |||  || ||||  |||||||||||||||||||||||    
T  39814 aacatgtaatttcacccacaaaaataccataatcatcaattcatgcacaggaaaatagaatcacagcaagagcacgaatttagcaacaatt 39904  T

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Target: scaffold0107; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 31477 - 31567
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| | || ||||| || |||||||||||| ||| |  || ||| ||| ||||  |||||||||||||| ||||||||    
T  31477 aacatgtaatttcacccataaacataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaatt 31567  T

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Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 12452 - 12418
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||||||||||||||||||||||    
T  12452 aaatgattatgataaaaactaacccccttacctta 12418  T

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Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 31184 - 31266
Alignment:
Q  138 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||| ||||||| | | ||||||||||||||    
T  31184 tgaacatgcaatttcaccaacaacaatccaattatcaccaatttcatgcattcaaatatatcatcataattagagcacgaatt 31266  T

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Target: scaffold0387 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 1063 - 962
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| |||||| || |||||||||||| | | ||||| |||||||    
T  1063 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcatcataattagaacacgaat 964  T
Q  219 tt 220  Q
    ||    
T  963 tt 962  T

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Target: scaffold0165 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 30110 - 30211
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| ||||| | |||||||| ||||||||| ||||  || ||||||||| ||||| |||| || |||||||||||| | ||| |||||||||||    
T  30110 tatcattttcacatactatgaacatgcaatttcacctacaacaattcaattatcaccaatttcatgtattcaaacatatcatcatagtaagagcacgaat 30209  T
Q  219 tt 220  Q
    ||    
T  30210 tt 30211  T

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Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

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Target: scaffold0193 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 4751 - 4831
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatca 199  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||    
T  4751 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatca 4831  T

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Target: scaffold0058 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 70390 - 70307
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatatcataacagttagagcacgaattt 220  Q
    ||||||||| || ||||| |||||| ||  |||||||||||||| |||||||||||||||||||| | |||| ||| ||||||||    
T  70390 ttgaacatgcaaattcac-aacaataattgaattatcatcaatttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

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Target: scaffold0058; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 57426 - 57392
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  57426 aaatgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold1666 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1666
Description:

Target: scaffold1666; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 84 - 1
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagc 223  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| |  || ||| | | ||||  ||||||||||||||||    
T  84 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcctcacagcaagagcacgaatttagc 1  T

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Target: scaffold0622 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 9393 - 9440
Alignment:
Q  4 catgaatatgcataaccaagcaattattcatcaatcataacatcaatt 51  Q
    |||||||||||||| ||||||||| ||||||||| || ||||||||||    
T  9393 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaatt 9440  T

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Target: scaffold0243 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 2400 - 2317
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagcacgaatt 219  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||| ||| | | || |||||||||||    
T  2400 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 2317  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 310
Target Start/End: Complemental strand, 193431 - 193396
Alignment:
Q  275 aaatgattatgataaaaactaacccccttaccttaa 310  Q
    |||||||||||||||| |||||||||||||||||||    
T  193431 aaatgattatgataaagactaacccccttaccttaa 193396  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 27643 - 27724
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcat 200  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| |||||| || ||||||||||||    
T  27643 tatcattttcacatactatgaacatgaaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcat 27724  T

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Target: scaffold0706 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 6477 - 6443
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  6477 aaatgattatgataaagactaacccccttacctta 6443  T

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Target: scaffold0597 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 912 - 878
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  912 aaatgattatgataaagactaacccccttacctta 878  T

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Target: scaffold0465 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 9916 - 9882
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  9916 aaatgattatgataaagactaacccccttacctta 9882  T

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Target: scaffold0383 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 2560 - 2650
Alignment:
Q  140 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcataacagttagagcacgaatttagcaacaatt 230  Q
    |||||||||||||||| |||| ||||| || | |||||||||||||| |  || ||| ||| || |  |||||||||||| ||||||||||    
T  2560 aacatgtaatttcacccacaaacataccataagcatcaattcatgcacaagaaaatagcatcacggcaagagcacgaattgagcaacaatt 2650  T

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Target: scaffold0383; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 2700 - 2732
Alignment:
Q  277 atgattatgataaaaactaacccccttacctta 309  Q
    ||||||||||||| |||||||||||||||||||    
T  2700 atgattatgataataactaacccccttacctta 2732  T

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Target: scaffold0251 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 13319 - 13285
Alignment:
Q  275 aaatgattatgataaaaactaacccccttacctta 309  Q
    |||||||||||||||| ||||||||||||||||||    
T  13319 aaatgattatgataaagactaacccccttacctta 13285  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 218
Target Start/End: Complemental strand, 97282 - 97200
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattc-atgcatacaaacatatcataacagttagagcacgaat 218  Q
    ||||||||| |||| |||||||||  || ||||||||| |||||  |||||| |||||||||||| | | |||||||||||||    
T  97282 ttgaacatgcaattccaccaacaacaattcaattatcaccaattttatgcattcaaacatatcatcataattagagcacgaat 97200  T

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Target: scaffold1295 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 442 - 499
Alignment:
Q  293 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 350  Q
    ||||||||||||||| | ||||| |||| |  |||||| |||||||||||||||||||    
T  442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

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Target: scaffold0598 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 3397 - 3478
Alignment:
Q  121 tatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcat 200  Q
    ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| |||||| || ||||||||||||    
T  3397 tatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcat 3478  T

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Target: scaffold0516 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 12081 - 12044
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  12081 tgaaattgattatgataataactaacccccttacctta 12044  T

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Target: scaffold0183 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 6899 - 6936
Alignment:
Q  272 tgaaaatgattatgataaaaactaacccccttacctta 309  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  6899 tgaaattgattatgataataactaacccccttacctta 6936  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 43882 - 43805
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcataacagttagagca 213  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||| ||| | | ||||||||    
T  43882 ttgaacatgaaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatagcatcataattagagca 43805  T

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Target: scaffold1272 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 457 - 517
Alignment:
Q  137 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacata 196  Q
    ||||||||| ||||||||||||||  ||| |||||||| ||| ||||||||| ||||||||    
T  457 ttgaacatgaaatttcaccaacaacaatataattatcaacaacttcatgcattcaaacata 517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 7820 - 7695
Alignment:
Q  76 caacaacttagcaaaattcaccaatt-gagcacaatttttacaacttatcatttttacataat-tgaacatgtaatttcaccaacaatcatacaattatc 173  Q
    ||||||| ||||| |||||| ||||| ||||||||||   ||||  ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||    
T  7820 caacaacatagcacaattcaacaattagagcacaattc--acaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatc 7723  T
Q  174 atcaa-ttcatgcatacaaacatatcat 200  Q
    | ||| |||||| |  ||||||||||||    
T  7722 accaatttcatgtagtcaaacatatcat 7695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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