View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13402_high_31 (Length: 326)

Name: NF13402_high_31
Description: NF13402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13402_high_31
NF13402_high_31
[»] chr8 (14 HSPs)
chr8 (159-305)||(38613611-38613757)
chr8 (32-162)||(6311097-6311229)
chr8 (32-160)||(7290080-7290211)
chr8 (34-159)||(36979184-36979308)
chr8 (34-159)||(4760242-4760366)
chr8 (53-159)||(18853356-18853457)
chr8 (40-159)||(18870734-18870849)
chr8 (34-159)||(30655448-30655572)
chr8 (55-138)||(25328456-25328540)
chr8 (55-138)||(39785002-39785086)
chr8 (62-168)||(10689339-10689442)
chr8 (34-123)||(33037972-33038063)
chr8 (55-138)||(35745213-35745298)
chr8 (64-138)||(10684452-10684528)
[»] chr5 (21 HSPs)
chr5 (32-160)||(1457315-1457446)
chr5 (32-142)||(30631227-30631338)
chr5 (32-159)||(27444771-27444901)
chr5 (32-159)||(43592080-43592210)
chr5 (32-159)||(43598525-43598655)
chr5 (32-159)||(43604017-43604147)
chr5 (32-159)||(43609509-43609639)
chr5 (32-159)||(27449615-27449745)
chr5 (55-138)||(28807753-28807837)
chr5 (32-138)||(15044512-15044618)
chr5 (94-159)||(31180079-31180142)
chr5 (55-138)||(37556802-37556887)
chr5 (55-138)||(37561624-37561709)
chr5 (55-138)||(2785197-2785282)
chr5 (55-138)||(31397171-31397256)
chr5 (55-138)||(31402028-31402113)
chr5 (34-159)||(38191983-38192105)
chr5 (34-159)||(38219208-38219330)
chr5 (55-120)||(33791158-33791223)
chr5 (103-159)||(35387474-35387527)
chr5 (55-120)||(33768021-33768086)
[»] chr4 (11 HSPs)
chr4 (32-160)||(51520257-51520388)
chr4 (32-138)||(9224560-9224668)
chr4 (32-138)||(9229347-9229455)
chr4 (32-160)||(56146865-56146996)
chr4 (55-138)||(45347996-45348079)
chr4 (55-138)||(45357475-45357558)
chr4 (33-138)||(3813846-3813954)
chr4 (55-138)||(18855549-18855633)
chr4 (34-159)||(24741748-24741871)
chr4 (34-159)||(29760449-29760572)
chr4 (55-138)||(5732486-5732568)
[»] scaffold0135 (1 HSPs)
scaffold0135 (32-138)||(35215-35323)
[»] chr7 (15 HSPs)
chr7 (32-138)||(12396735-12396843)
chr7 (32-138)||(12406155-12406263)
chr7 (55-138)||(24024506-24024589)
chr7 (32-138)||(4866553-4866661)
chr7 (55-161)||(2057763-2057866)
chr7 (55-138)||(31109761-31109844)
chr7 (34-159)||(20357713-20357837)
chr7 (55-138)||(21812417-21812501)
chr7 (55-138)||(19992135-19992219)
chr7 (34-159)||(1533608-1533730)
chr7 (82-159)||(21645818-21645892)
chr7 (64-138)||(16879894-16879970)
chr7 (64-138)||(16884750-16884826)
chr7 (64-138)||(24261511-24261587)
chr7 (64-138)||(24266390-24266466)
[»] chr6 (14 HSPs)
chr6 (32-138)||(11856795-11856903)
chr6 (32-138)||(14737730-14737838)
chr6 (32-138)||(14742589-14742697)
chr6 (55-138)||(22010875-22010958)
chr6 (55-138)||(6438324-6438407)
chr6 (32-138)||(28184325-28184436)
chr6 (55-138)||(28155749-28155832)
chr6 (34-159)||(30125960-30126084)
chr6 (34-159)||(5674934-5675057)
chr6 (55-138)||(6005239-6005324)
chr6 (55-120)||(5343322-5343387)
chr6 (55-120)||(33330625-33330690)
chr6 (55-138)||(33336122-33336207)
chr6 (55-138)||(16838566-16838651)
[»] chr3 (14 HSPs)
chr3 (32-138)||(22173348-22173456)
chr3 (34-161)||(7167049-7167174)
chr3 (55-138)||(18656256-18656338)
chr3 (55-159)||(2671776-2671876)
chr3 (56-159)||(40372986-40373085)
chr3 (32-159)||(28504020-28504145)
chr3 (55-159)||(8739254-8739354)
chr3 (55-159)||(9091492-9091592)
chr3 (55-138)||(8512037-8512122)
chr3 (55-138)||(8516917-8517002)
chr3 (55-138)||(2677266-2677351)
chr3 (34-160)||(8477170-8477295)
chr3 (55-138)||(2673110-2673195)
chr3 (55-138)||(10207755-10207840)
[»] chr2 (10 HSPs)
chr2 (55-138)||(44312802-44312885)
chr2 (34-161)||(11099093-11099219)
chr2 (32-138)||(32246607-32246716)
chr2 (55-138)||(39812166-39812250)
chr2 (55-159)||(9296591-9296691)
chr2 (55-159)||(14291295-14291395)
chr2 (55-138)||(19344243-19344327)
chr2 (55-138)||(19349101-19349185)
chr2 (34-159)||(25403443-25403565)
chr2 (34-159)||(25398305-25398427)
[»] chr1 (10 HSPs)
chr1 (55-138)||(25445268-25445352)
chr1 (55-138)||(39445322-39445406)
chr1 (55-138)||(44024051-44024135)
chr1 (60-138)||(41386571-41386650)
chr1 (55-138)||(41398060-41398144)
chr1 (55-138)||(1055190-1055274)
chr1 (55-120)||(43988644-43988709)
chr1 (62-123)||(24787564-24787624)
chr1 (103-159)||(19359079-19359132)
chr1 (103-159)||(24203001-24203054)
[»] scaffold0127 (1 HSPs)
scaffold0127 (60-138)||(34132-34211)
[»] scaffold0464 (1 HSPs)
scaffold0464 (55-138)||(185-269)
[»] scaffold0355 (2 HSPs)
scaffold0355 (55-138)||(9818-9902)
scaffold0355 (55-138)||(65-143)
[»] scaffold0978 (1 HSPs)
scaffold0978 (62-160)||(433-528)
[»] scaffold0479 (1 HSPs)
scaffold0479 (77-138)||(13171-13233)
[»] scaffold0197 (2 HSPs)
scaffold0197 (55-138)||(19343-19428)
scaffold0197 (64-138)||(14497-14573)
[»] scaffold0028 (1 HSPs)
scaffold0028 (55-138)||(149134-149219)
[»] scaffold0259 (1 HSPs)
scaffold0259 (55-138)||(2429-2514)
[»] scaffold0188 (1 HSPs)
scaffold0188 (103-159)||(24278-24331)
[»] scaffold0009 (1 HSPs)
scaffold0009 (64-138)||(182152-182228)


Alignment Details
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 159 - 305
Target Start/End: Complemental strand, 38613757 - 38613611
Alignment:
Q  159 agaagcaaaattcagcagattcaaaccttggcaacggtgtttgtgcaatgtatttaagaccctgcaggtgaaaacggagattacaatgagtatcaagttt 258  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38613757 agaagcaaaatcgagctgattcaaaccttggcaacggtgtttgtgcaatgtatttaagaccctgcaggtgaaaacggagattacaatgagtatcaagttt 38613658  T
Q  259 aaaattactcataattttgaaacctgggaccagagatgatgatgatg 305  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  38613657 aaaattactcataattttgaaagctgggaccagagaagatgatgatg 38613611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 32 - 162
Target Start/End: Complemental strand, 6311229 - 6311097
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6311229 tatacactagtctagggctgctttgttgttgtttgcttggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttca 6311130  T
Q  130 ttggtgtgagtttcaaccggaatcacaacagaa 162  Q
    ||||||||||||||||||||| |||||||||||    
T  6311129 ttggtgtgagtttcaaccggattcacaacagaa 6311097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 7290080 - 7290211
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  7290080 tatacactagtctagggctgctttgttgttgtttgtttggagaccatttgttctcattgattaccactatctcttgctccacacatcaatgtttatttca 7290179  T
Q  130 ttggtgtgagttt-caaccggaatcacaacag 160  Q
    |||||||||||||  ||||||| |||||||||    
T  7290180 ttggtgtgagtttggaaccggattcacaacag 7290211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 36979308 - 36979184
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    |||||||||||||||||  ||||||||||  ||||||||||||||||  | |||| ||||||||||||| ||||||||||||||| ||||||  ||||||    
T  36979308 tacactagtctagggctgtttttgttgttgttgcttggaaaccattttgt-tcattgattaccactatctcttgctccacacatctttgttt--ttcatt 36979212  T
Q  132 ggtgtgagtttcaaccggaatcacaaca 159  Q
    ||||||||||||||||||| ||||||||    
T  36979211 ggtgtgagtttcaaccggattcacaaca 36979184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 4760242 - 4760366
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    |||||||||||||||||  ||||||||||  |||||||||||||||| | ||||| ||||||||||||| || |||||||||||| ||||||  ||||||    
T  4760242 tacactagtctagggctgtttttgttgttgttgcttggaaaccattt-tgctcattgattaccactatctctagctccacacatctttgttt--ttcatt 4760338  T
Q  132 ggtgtgagtttcaaccggaatcacaaca 159  Q
    | ||||||||||||||||| ||||||||    
T  4760339 gatgtgagtttcaaccggattcacaaca 4760366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 18853356 - 18853457
Alignment:
Q  53 ttttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaat 152  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||    ||| |||| ||||||||||||||||||||| |    
T  18853356 ttttgttgtttgcttggaaaccatttga-ctcatagattaccactatctcttgctccacacatc----tttgtttcgttggtgtgagtttcaaccggatt 18853450  T
Q  153 cacaaca 159  Q
    |||||||    
T  18853451 cacaaca 18853457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 159
Target Start/End: Original strand, 18870734 - 18870849
Alignment:
Q  40 agtctagggctagttttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtgag 139  Q
    ||||||||||   ||||||||||||||||||||||||||   ||||| |||||||| |||| ||||||||||||||| ||||||   |||||||||||||    
T  18870734 agtctagggcgttttttgttgtttgcttggaaaccatttaa-ctcatagattaccattatctcttgctccacacatctttgttt---tcattggtgtgag 18870829  T
Q  140 tttcaaccggaatcacaaca 159  Q
    ||||||||||| ||||||||    
T  18870830 tttcaaccggattcacaaca 18870849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 30655572 - 30655448
Alignment:
Q  34 tacactagtctagggctagtttt-gttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcat 130  Q
    |||||||||||||||||  |||| ||||||  ||||||||||||||||  | |||| ||||||||||||| ||||||||||||||| ||||||   ||||    
T  30655572 tacactagtctagggctgttttttgttgttgttgcttggaaaccattttgt-tcattgattaccactatctcttgctccacacatctttgttt---tcat 30655477  T
Q  131 tggtgtgagtttcaaccggaatcacaaca 159  Q
    |||||||||||||||||||| ||||||||    
T  30655476 tggtgtgagtttcaaccggattcacaaca 30655448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 25328456 - 25328540
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatttcattggtgtga 138  Q
    |||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||| |||||    
T  25328456 ttgttgttggcttggagaccatttgttctcattgattatcactatcacttgctccgcacatcattgatttatttcattgttgtga 25328540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 39785002 - 39785086
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    ||||| || ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||    
T  39785002 ttgttattggcttggagaccatttgttctcattgattatcactatcacttgctccacacatctttggtttatttcattggtgtga 39785086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 10689339 - 10689442
Alignment:
Q  62 ttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaacaga 161  Q
    |||||||||||||||| |  ||||| ||||||||||||| ||||||||||||||| |||||  |||||||||||||||||||||||| || ||||||| |    
T  10689339 ttgcttggaaaccattaga-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagtttcaaccgaaaacacaacaca 10689435  T
Q  162 agcaaaa 168  Q
    | |||||    
T  10689436 atcaaaa 10689442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 33037972 - 33038063
Alignment:
Q  34 tacactagtctagggctagtt-ttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgttt 123  Q
    |||||||||||||||||  || ||||||||  ||||||||||||||||  | |||| ||||||||||||| ||||||||||||||| ||||||    
T  33037972 tacactagtctagggctgtttattgttgttgttgcttggaaaccattttgt-tcattgattaccactatctcttgctccacacatctttgttt 33038063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 35745298 - 35745213
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 138  Q
    |||||||| |||||||  |||||||  ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  35745298 ttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 35745213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 10684452 - 10684528
Alignment:
Q  64 gcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||  |||||||  ||||| ||||||| ||||| ||||||||||||||| ||| |||||| ||||||||||||    
T  10684452 gcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtga 10684528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 1457315 - 1457446
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1457315 tatacactagtctagggctgctttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttca 1457414  T
Q  130 ttggtgtgagttt-caaccggaatcacaacag 160  Q
    |||||||||||||  ||||||| |||||||||    
T  1457415 ttggtgtgagtttggaaccggattcacaacag 1457446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 30631338 - 30631227
Alignment:
Q  32 tatacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    ||||||||||||||||||| |||||||||||  |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  30631338 tatacactagtctagggct-gttttgttgttgttgcttgaaaaccatttgttctcatagattaccactatctcttgctccacacatcattgtttatttca 30631240  T
Q  130 ttggtgtgagttt 142  Q
    || ||||||||||    
T  30631239 tttgtgtgagttt 30631227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 27444901 - 27444771
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  | |  ||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  27444901 tatacactagtctagggctgctatgttgttgtttgcttggagaccatttgtactcattgattaccactatctcttgctccacacatcattgtttatttca 27444802  T
Q  130 ttggtgtgagttt-caaccggaatcacaaca 159  Q
    |||||||||||||  ||||||| ||||||||    
T  27444801 ttggtgtgagtttggaaccggattcacaaca 27444771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 43592210 - 43592080
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  43592210 tatacactagtctagggctgctttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttca 43592111  T
Q  130 ttggtgtgagttt-caaccggaatcacaaca 159  Q
    ||| ||||| |||  ||||||| ||||||||    
T  43592110 ttgatgtgactttggaaccggattcacaaca 43592080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 43598655 - 43598525
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  43598655 tatacactagtctagggctgctttgttgttgtttgcttggagaccaattgttctcattgattaccactatctcttgctccacacatcattgtttatttca 43598556  T
Q  130 ttggtgtgagttt-caaccggaatcacaaca 159  Q
    ||||||||| |||  ||||||| ||||||||    
T  43598555 ttggtgtgactttggaaccggattcacaaca 43598525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 43604147 - 43604017
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  43604147 tatacactagtctagggctgctttgttgttgtttgcttggagaccaattgttctcattgattaccactatctcttgctccacacatcattgtttatttca 43604048  T
Q  130 ttggtgtgagttt-caaccggaatcacaaca 159  Q
    ||||||||| |||  ||||||| ||||||||    
T  43604047 ttggtgtgactttggaaccggattcacaaca 43604017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 43609639 - 43609509
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  43609639 tatacactagtctagggctgctttgttgttgtttgcttggagaccaattgttctcattgattaccactatctcttgctccacacatcattgtttatttca 43609540  T
Q  130 ttggtgtgagttt-caaccggaatcacaaca 159  Q
    ||||||||| |||  ||||||| ||||||||    
T  43609539 ttggtgtgactttggaaccggattcacaaca 43609509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 27449745 - 27449615
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  | |  ||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  27449745 tatacactagtctagggctgctatgttgttgtttgcttggagaccatttgtactcattgattaccactatctcttgctccacatatcattgtttatttca 27449646  T
Q  130 ttggtgtgagttt-caaccggaatcacaaca 159  Q
    |||||||||||||  ||||||| ||||||||    
T  27449645 ttggtgtgagtttggaaccggattcacaaca 27449615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 28807753 - 28807837
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  28807753 ttgttgtttgcttggaagccatttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 28807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 15044618 - 15044512
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||| | ||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||||  |||||||    
T  15044618 tatacactagtctagggctgttttgttgttgttggtttggagaccatttgttctcattgattaccactatcacttgctctacacgtcattg--tatttca 15044521  T
Q  130 ttggtgtga 138  Q
    |||||||||    
T  15044520 ttggtgtga 15044512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 31180142 - 31180079
Alignment:
Q  94 cactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 159  Q
    ||||||| |||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||    
T  31180142 cactatctcttgctccacacatcattgtta--ttcattggtgtgagtttcaaccggattcacaaca 31180079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 37556802 - 37556887
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 138  Q
    |||||||| |||||||  ||||||| |||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||||||    
T  37556802 ttgttgttagcttggaggccatttgctctcatagattatcactatcacttgctccacacatctttggtttattatcattggtgtga 37556887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 37561624 - 37561709
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 138  Q
    |||||||| |||||||  ||||||| |||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||||||    
T  37561624 ttgttgttagcttggaggccatttgctctcatagattatcactatcacttgctccacacatctttggtttattatcattggtgtga 37561709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 2785282 - 2785197
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 138  Q
    |||||||| |||||||  |||||||  ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  2785282 ttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 2785197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 31397171 - 31397256
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||| |||||||  |||||||  ||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  31397171 ttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 31397256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 31402028 - 31402113
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||| |||||||  |||||||  ||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  31402028 ttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 31402113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 38192105 - 38191983
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    |||||||||||||||||  ||||||||||  |||||||| ||  |||   | ||| ||||||||||  |  |||||||||||||| |||||||   ||||    
T  38192105 tacactagtctagggctgtttttgttgttgttgcttggagacacttta--cacatagattaccacttccttttgctccacacatctttgttta---catt 38192011  T
Q  132 ggtgtgagtttcaaccggaatcacaaca 159  Q
    ||||||||||||||||||| ||||||||    
T  38192010 ggtgtgagtttcaaccggattcacaaca 38191983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 38219330 - 38219208
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    |||||||||||||||||  ||||||||||  |||||||| ||  |||   | ||| ||||||||||  |  |||||||||||||| |||||||   ||||    
T  38219330 tacactagtctagggctgtttttgttgttgttgcttggagacacttta--cacatagattaccacttccttttgctccacacatctttgttta---catt 38219236  T
Q  132 ggtgtgagtttcaaccggaatcacaaca 159  Q
    ||||||||||||||||||| ||||||||    
T  38219235 ggtgtgagtttcaaccggattcacaaca 38219208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 33791223 - 33791158
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg 120  Q
    |||||||| |||||||  |||||||  ||||| ||||| | |||||||||||||||||||||||||    
T  33791223 ttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatcattg 33791158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 35387527 - 35387474
Alignment:
Q  103 ttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 159  Q
    |||||||||||||| |||||||   ||||||||||||||| ||||||| ||||||||    
T  35387527 ttgctccacacatctttgttta---cattggtgtgagttttaaccggattcacaaca 35387474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 33768086 - 33768021
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg 120  Q
    |||||||| |||||||   ||||||  ||||| ||||| | |||||||||||||||||||||||||    
T  33768086 ttgttgttagcttggaggtcatttgcactcatagattatctctatcacttgctccacacatcattg 33768021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 51520388 - 51520257
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  51520388 tatacactagtctagggctgctttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttca 51520289  T
Q  130 ttggtgtgagttt-caaccggaatcacaacag 160  Q
    |||||||||||||  ||||||| |||||||||    
T  51520288 ttggtgtgagtttggaaccggattcacaacag 51520257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 9224560 - 9224668
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  9224560 tatacactagtctagggctgttttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttca 9224659  T
Q  130 ttggtgtga 138  Q
    |||||||||    
T  9224660 ttggtgtga 9224668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 9229347 - 9229455
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  9229347 tatacactagtctagggctgttttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttca 9229446  T
Q  130 ttggtgtga 138  Q
    |||||||||    
T  9229447 ttggtgtga 9229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 56146865 - 56146996
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  56146865 tatacactagtctagggctgctttgttgttgtttgcttggagaccaattgttctcattgattaccactatctcttgctccacacatcattgtttatttca 56146964  T
Q  130 ttggtgtgagttt-caaccggaatcacaacag 160  Q
    ||||||||| |||  ||||||| |||||||||    
T  56146965 ttggtgtgaatttggaaccggattcacaacag 56146996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 45347996 - 45348079
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 138  Q
    |||||||| ||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45347996 ttgttgttagcttgaagaccatttgttctcatagattaccactatcacttgctccacacatcattgtttatttcattggtgtga 45348079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 45357475 - 45357558
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 138  Q
    |||||||| ||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45357475 ttgttgttagcttgaagaccatttgttctcatagattaccactatcacttgctccacacatcattgtttatttcattggtgtga 45357558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 33 - 138
Target Start/End: Complemental strand, 3813954 - 3813846
Alignment:
Q  33 atacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttca 129  Q
    ||||||||||||||| ||  |||  ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  3813954 atacactagtctaggactgttttgttgttgtttgcttggagaccatttgctctcattgattaccactatcacttgctccacacatcattggtttatttca 3813855  T
Q  130 ttggtgtga 138  Q
    |||||||||    
T  3813854 ttggtgtga 3813846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 18855633 - 18855549
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  18855633 ttgttgtttgcttggaagccatttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 18855549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 24741871 - 24741748
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    |||||||||||||||||  ||||||||||  ||||||||||||||||  | |||| ||||||||||||| ||||||||||||||| ||||||   |||||    
T  24741871 tacactagtctagggctgtttttgttgttgttgcttggaaaccattttgt-tcattgattaccactatctcttgctccacacatctttgttt---tcatt 24741776  T
Q  132 ggtgtgagtttcaaccggaatcacaaca 159  Q
    ||||||||||||||||||| ||||||||    
T  24741775 ggtgtgagtttcaaccggattcacaaca 24741748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 29760572 - 29760449
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    ||||||||||||||| | |||||||||||  ||||||||||||||||  | | || ||||||||||||| ||||||||||||||| ||||||  ||||||    
T  29760572 tacactagtctagggtt-gttttgttgttgttgcttggaaaccattttgttt-attgattaccactatctcttgctccacacatctttgttt--ttcatt 29760477  T
Q  132 ggtgtgagtttcaaccggaatcacaaca 159  Q
    ||||||||||||||||||| ||||||||    
T  29760476 ggtgtgagtttcaaccggattcacaaca 29760449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 5732568 - 5732486
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 138  Q
    |||||||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  5732568 ttgttgttagcttggagaccatttgttctcattgattaccaccatcacttgctccacacatcattgtat-tttcattggtgtga 5732486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 35215 - 35323
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  35215 tatacactagtctagggctgttttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttca 35314  T
Q  130 ttggtgtga 138  Q
    |||||||||    
T  35315 ttggtgtga 35323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 12396843 - 12396735
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  12396843 tatacactagtctagggctgctttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttca 12396744  T
Q  130 ttggtgtga 138  Q
    |||||||||    
T  12396743 ttggtgtga 12396735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 12406263 - 12406155
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  12406263 tatacactagtctagggctgctttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttca 12406164  T
Q  130 ttggtgtga 138  Q
    |||||||||    
T  12406163 ttggtgtga 12406155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 24024506 - 24024589
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 138  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24024506 ttgttgtttgcttggagaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 24024589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 4866661 - 4866553
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||| ||  |||  ||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  4866661 tatacactagtctaggactgttttgttgttgtttgcttggagaccatttgtcctcattgattaccactatctcttgctccacacatcattgtttatttca 4866562  T
Q  130 ttggtgtga 138  Q
    |||||||||    
T  4866561 ttggtgtga 4866553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 161
Target Start/End: Complemental strand, 2057866 - 2057763
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatca 154  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||||||||||| |||    
T  2057866 ttgttgtttgcttggaaaccatttga-ctcatagattaccactatctcttgctccacacatctttgttt--ttcattggtgtgagtttcaaccggattca 2057770  T
Q  155 caacaga 161  Q
    |||||||    
T  2057769 caacaga 2057763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 31109761 - 31109844
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 138  Q
    |||||||| ||||||| ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  31109761 ttgttgttggcttggagaccatttgttctcattgattatcactatcacttgctgcacacatcattgtttatttcattggtgtga 31109844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 20357713 - 20357837
Alignment:
Q  34 tacactagtctagggctagttttgttgttt---gcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcat 130  Q
    |||||||||||||||||  ||||||||||    ||||||| ||||||||  ||||| ||||||||||||| ||||||||||||||| ||||||   ||||    
T  20357713 tacactagtctagggctgtttttgttgttgttagcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgttt---tcat 20357808  T
Q  131 tggtgtgagtttcaaccggaatcacaaca 159  Q
    |||||||||||||||||||| ||||||||    
T  20357809 tggtgtgagtttcaaccggattcacaaca 20357837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 21812417 - 21812501
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    |||||||| |||||||| ||||||| |||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  21812417 ttgttgttagcttggaagccatttgctctcatagattaccactatctcttgctccacacatctttggtttatttcattggtgtga 21812501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 19992219 - 19992135
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    |||||||  |||||||| |||||||||||||| ||||| ||||||||| ||||||||||||| || |||||||||||||||||||    
T  19992219 ttgttgtaagcttggaagccatttgttctcattgattatcactatcacctgctccacacatctttggtttatttcattggtgtga 19992135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 1533608 - 1533730
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    |||||||| || ||||| |||||||||||  |||||||||||  ||| ||||||| ||||||||||||   |||||||||||||| ||||||   |||||    
T  1533608 tacactagactggggctggttttgttgttgttgcttggaaac--ttttttctcattgattaccactatattttgctccacacatctttgttt---tcatt 1533702  T
Q  132 ggtgtgagtttcaaccggaatcacaaca 159  Q
    ||||||||||| ||||||| ||||||||    
T  1533703 ggtgtgagttttaaccggattcacaaca 1533730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 21645892 - 21645818
Alignment:
Q  82 ctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 159  Q
    ||||| ||||||||||  |  |||||||||||||| |||||||   ||||||||||||||| ||||||| ||||||||    
T  21645892 ctcatagattaccactcccttttgctccacacatctttgttta---cattggtgtgagttttaaccggattcacaaca 21645818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 16879970 - 16879894
Alignment:
Q  64 gcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||  |||||||  ||||| ||||||| ||||| ||||||||||||||| ||| |||||| ||||||||||||    
T  16879970 gcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtga 16879894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 16884826 - 16884750
Alignment:
Q  64 gcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||  |||||||  ||||| ||||||| ||||| ||||||||||||||| ||| |||||| ||||||||||||    
T  16884826 gcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtga 16884750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 24261511 - 24261587
Alignment:
Q  64 gcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||  |||||||  ||||| ||||||| ||||| ||||||||||||||| ||| |||||| ||||||||||||    
T  24261511 gcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtga 24261587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 24266390 - 24266466
Alignment:
Q  64 gcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||  |||||||  ||||| ||||||| ||||| ||||||||||||||| ||| |||||| ||||||||||||    
T  24266390 gcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtga 24266466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 11856903 - 11856795
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  11856903 tatacactagtctagggctgttttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttca 11856804  T
Q  130 ttggtgtga 138  Q
    |||||||||    
T  11856803 ttggtgtga 11856795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 14737730 - 14737838
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  14737730 tatacactagtctagggctgttttgttgttgtttgcttggagaccatttgttctcattgattatcactatcacttgctccacacatcattgtttatttca 14737829  T
Q  130 ttggtgtga 138  Q
    |||||||||    
T  14737830 ttggtgtga 14737838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 14742589 - 14742697
Alignment:
Q  32 tatacactagtctagggctagttttgttgtt---tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttc 128  Q
    ||||||||||||||||||| |||||||||||   |||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  14742589 tatacactagtctagggct-gttttgttgttgtatgcttggagaccatttgttctcattgattatcactatcacttgctccacacatcattgtttatttc 14742687  T
Q  129 attggtgtga 138  Q
    ||||||||||    
T  14742688 attggtgtga 14742697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 22010875 - 22010958
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 138  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010875 ttgttgtttgcttggagaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 22010958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 6438407 - 6438324
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 138  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6438407 ttgttgtttgcttggaagccattggttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 6438324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 28184436 - 28184325
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccattt--gttctcatcgattaccactatcacttgctccacacatcatt-gtttatt 126  Q
    |||||||||||||||||||  |||  ||||||||||||||| |||||||  |||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  28184436 tatacactagtctagggctgttttgttgttgtttgcttggagaccatttttgttctcattgattatcactatcacttgctccacacatcattggtttatt 28184337  T
Q  127 tcattggtgtga 138  Q
    ||||||||||||    
T  28184336 tcattggtgtga 28184325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 28155749 - 28155832
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 138  Q
    |||||||| ||||| | |||||||| |||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  28155749 ttgttgttagcttgaagaccatttgctctcattgattatcactatcacttgctccacacatcattgtttattgcattggtgtga 28155832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 30125960 - 30126084
Alignment:
Q  34 tacactagtctagggctagttttgttgt---ttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcat 130  Q
    |||||||||||||||||  |||||||||   | ||||||| ||||||||  ||||| ||||| ||||| | ||||||||||||||| ||||||   ||||    
T  30125960 tacactagtctagggctgtttttgttgtagttagcttggagaccatttgg-ctcatagattatcactacctcttgctccacacatctttgttt---tcat 30126055  T
Q  131 tggtgtgagtttcaaccggaatcacaaca 159  Q
    |||||||| ||||||||||| ||||||||    
T  30126056 tggtgtgattttcaaccggattcacaaca 30126084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 5674934 - 5675057
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    |||||||| |||||||| |||||||||||  ||||||| || | ||| | ||| | |||||||||||||  |||||||||||||| ||||||   |||||    
T  5674934 tacactagactagggctggttttgttgttgttgcttgggaaactttt-tactctttgattaccactatcttttgctccacacatctttgttt---tcatt 5675029  T
Q  132 ggtgtgagtttcaaccggaatcacaaca 159  Q
    ||||||||||| ||||||| ||||||||    
T  5675030 ggtgtgagttttaaccggattcacaaca 5675057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 6005324 - 6005239
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 138  Q
    |||||||| |||||||  |||||||  ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  6005324 ttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 6005239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 5343387 - 5343322
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg 120  Q
    |||||||| |||||||  |||||||  ||||| ||||| | |||||||||||||||||||||||||    
T  5343387 ttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatcattg 5343322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 33330625 - 33330690
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg 120  Q
    |||||||| |||||||  |||||||  ||||| ||||| | |||||||||||||||||||||||||    
T  33330625 ttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatcattg 33330690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 33336122 - 33336207
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 138  Q
    |||||||| | |||||  |||||||  ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  33336122 ttgttgttagtttggaggccatttgcactcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 33336207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 16838651 - 16838566
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 138  Q
    |||||||| ||||| |  |||||||  ||||| ||||| | ||||||||||||||||| |||||| ||||||| ||||||||||||    
T  16838651 ttgttgttagcttgaaggccatttgcactcatagattatctctatcacttgctccacatatcattggtttattctcattggtgtga 16838566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 22173348 - 22173456
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  22173348 tatacactagtctagggctgttttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttca 22173447  T
Q  130 ttggtgtga 138  Q
    |||||||||    
T  22173448 ttggtgtga 22173456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 34 - 161
Target Start/End: Complemental strand, 7167174 - 7167049
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||| | ||||| ||||||||||||| ||||||||||||||| ||||||  ||||||    
T  7167174 tacactagtctagggct-gttttgttgttgttgcttggaaaccattt-tgctcatagattaccactatctcttgctccacacatctttgttt--ttcatt 7167079  T
Q  132 ggtgtgagtttcaaccggaatcacaacaga 161  Q
    ||||||||||||||||||| ||||||||||    
T  7167078 ggtgtgagtttcaaccggattcacaacaga 7167049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 18656338 - 18656256
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 138  Q
    |||||||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  18656338 ttgttgttagcttggagaccatttgttctcattgattaccaccatcacttgctccacacatcattgtat-tttcattggtgtga 18656256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 2671776 - 2671876
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatca 154  Q
    |||||||||||||||| ||||||||  ||||| ||||||||||||| ||||||||||||||| ||||   |||||||||||||||||| ||||||| |||    
T  2671776 ttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgt---tttcattggtgtgagttttaaccggattca 2671871  T
Q  155 caaca 159  Q
    |||||    
T  2671872 caaca 2671876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 40372986 - 40373085
Alignment:
Q  56 tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcac 155  Q
    ||||||||||||||||||||||| | | ||| ||||||||||||| ||||||||||||| | ||||||   |||||||||||||||| ||||||| ||||    
T  40372986 tgttgtttgcttggaaaccattt-tgcccattgattaccactatctcttgctccacacacctttgttt---tcattggtgtgagttttaaccggattcac 40373081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 159
Target Start/End: Original strand, 28504020 - 28504145
Alignment:
Q  32 tatacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttca 129  Q
    |||||||||||| |||||| |||||||||||  |||||||||||||||| ||||||| ||||| ||||| |  ||||||||||||||||||||   ||||    
T  28504020 tatacactagtcaagggct-gttttgttgttgttgcttggaaaccattt-ttctcatagattatcactaccttttgctccacacatcattgtt--attca 28504115  T
Q  130 ttggtgtgagtttcaaccggaatcacaaca 159  Q
    ||||||||||||   |||||| ||||||||    
T  28504116 ttggtgtgagttaagaccggattcacaaca 28504145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 8739254 - 8739354
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatca 154  Q
    ||||| |||||||||||||||||||  ||||| ||||||||||||  ||||||||||||||| ||||   |||||||||||||||| ||||||| | |||    
T  8739254 ttgttatttgcttggaaaccatttga-ctcatagattaccactatttcttgctccacacatctttgt---tttcattggtgtgagtctcaaccgaattca 8739349  T
Q  155 caaca 159  Q
    |||||    
T  8739350 caaca 8739354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 9091492 - 9091592
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatca 154  Q
    ||||| |||||||||||||||||||  ||||| ||||||||||||  ||||||||||||||| ||||   |||||||||||||||| ||||||| | |||    
T  9091492 ttgttatttgcttggaaaccatttga-ctcatagattaccactatttcttgctccacacatctttgt---tttcattggtgtgagtctcaaccgaattca 9091587  T
Q  155 caaca 159  Q
    |||||    
T  9091588 caaca 9091592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 8512122 - 8512037
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||| |||||||| ||||||| |||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  8512122 ttgttgttagcttggaagccatttgctctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 8512037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 8517002 - 8516917
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||| |||||||| ||||||| |||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  8517002 ttgttgttagcttggaagccatttgctctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 8516917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 2677266 - 2677351
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 138  Q
    |||||||| |||||||  ||||||| |||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  2677266 ttgttgttagcttggaggccatttgctctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 2677351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 8477295 - 8477170
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    ||||||||||||||||| |||||||||||  ||||||| || | ||| | ||| | |||||||||||||  |||||||||||||| ||||   |||||||    
T  8477295 tacactagtctagggctggttttgttgttgttgcttgggaaactttt-tactctttgattaccactatcttttgctccacacatctttgt---tttcatt 8477200  T
Q  132 ggtgtgagtttca-accggaatcacaacag 160  Q
    ||||||||||| | |||||| |||||||||    
T  8477199 ggtgtgagttttataccggattcacaacag 8477170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 2673110 - 2673195
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 138  Q
    |||||||| |||||||  ||||||  |||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  2673110 ttgttgttagcttggaggccatttactctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 2673195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 10207840 - 10207755
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 138  Q
    |||||||| |||||||  |||||||  ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  10207840 ttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 10207755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 44312802 - 44312885
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 138  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44312802 ttgttgtttgcttggagaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 44312885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 11099093 - 11099219
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    |||||||||||||||||  ||||||||||  ||||||||||||||||  | |||| ||||||||||||| ||||||||||||||| ||||||  ||||||    
T  11099093 tacactagtctagggctgtttttgttgttgttgcttggaaaccattttgt-tcattgattaccactatctcttgctccacacatctttgttt--ttcatt 11099189  T
Q  132 ggtgtgagtttcaaccggaatcacaacaga 161  Q
    ||||||||||||||||||| ||||||||||    
T  11099190 ggtgtgagtttcaaccggattcacaacaga 11099219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 32246716 - 32246607
Alignment:
Q  32 tatacactagtctagggctagttt--tgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttc 128  Q
    |||||||||||||||| ||  |||  ||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  32246716 tatacactagtctaggactgttttgttgttgttagcttggagaccatttgttctcatagattaccactatcacttgctccacacatcattggtttatttc 32246617  T
Q  129 attggtgtga 138  Q
    ||||||||||    
T  32246616 attggtgtga 32246607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 39812166 - 39812250
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    |||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||    
T  39812166 ttgttgttggcttggagaccatttgttctcattgattatcactatcacttgctccacacatctttggtttatttcattggtgtga 39812250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 9296591 - 9296691
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatca 154  Q
    |||||||||||||||||||||||| | ||||| ||||||||||| |  |||||||||||||| ||||||   |||||||||||||||| ||||||| |||    
T  9296591 ttgttgtttgcttggaaaccattt-tgctcatagattaccactaccttttgctccacacatctttgttt---tcattggtgtgagttttaaccggattca 9296686  T
Q  155 caaca 159  Q
    |||||    
T  9296687 caaca 9296691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 14291395 - 14291295
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatca 154  Q
    |||||||||||||||||||||||| | | ||| ||||||||||||| ||||||||||||| | ||||||   |||||||||||||||| ||||||| |||    
T  14291395 ttgttgtttgcttggaaaccattt-tgcccattgattaccactatctcttgctccacacacctttgttt---tcattggtgtgagttttaaccggattca 14291300  T
Q  155 caaca 159  Q
    |||||    
T  14291299 caaca 14291295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 19344327 - 19344243
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    |||||||| |||||||  ||||||| |||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  19344327 ttgttgttagcttggaggccatttgctctcatagattaccactatctcttgctccacacatctttggtttatttcattggtgtga 19344243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 19349185 - 19349101
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    |||||||| |||||||  ||||||| |||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  19349185 ttgttgttagcttggaggccatttgctctcatagattaccactatctcttgctccacacatctttggtttatttcattggtgtga 19349101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 25403565 - 25403443
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    |||||||||||||||||  ||||||||||  |||||||| ||  |||   | ||| ||||||||||  |  |||||||||||||| |||||||   ||||    
T  25403565 tacactagtctagggctgtttttgttgttgttgcttggagacacttta--cacatagattaccacttccttttgctccacacatctttgttta---catt 25403471  T
Q  132 ggtgtgagtttcaaccggaatcacaaca 159  Q
    ||||||||||||||||||| ||||||||    
T  25403470 ggtgtgagtttcaaccggattcacaaca 25403443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 25398427 - 25398305
Alignment:
Q  34 tacactagtctagggctagttttgttgtt--tgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcatt 131  Q
    |||||||||||||||||  ||||||||||  |||||||| ||  |||   | ||| ||||||||||  |  |||||||||||||| |||||||   ||||    
T  25398427 tacactagtctagggctgtttttgttgttgttgcttggagacacttta--cacatagattaccacttccttttgctccacacatctttgttta---catt 25398333  T
Q  132 ggtgtgagtttcaaccggaatcacaaca 159  Q
    |||||||||||||||| || ||||||||    
T  25398332 ggtgtgagtttcaaccagattcacaaca 25398305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 25445268 - 25445352
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  25445268 ttgttgtttgcttggaagccatttgttctcattgattatcactatcgcttgctccacacatcattggtttatttcattggtgtga 25445352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 39445406 - 39445322
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  39445406 ttgttgtttgcttggaagccatttgttcacattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 39445322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 44024051 - 44024135
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  44024051 ttgttgtttgcttggaagccatttgttctcattgattatcactatcagttgctccacacatcattggtttatttcattggtgtga 44024135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 41386650 - 41386571
Alignment:
Q  60 gtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  41386650 gtttgcttggagaccatttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 41386571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 41398144 - 41398060
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||||||||||    
T  41398144 ttgttgtttgcttggagaccatatgttctcattgattatcactatcacttgctccacacataattggtttatttcattggtgtga 41398060  T

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Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 1055190 - 1055274
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    |||||||  ||||||||  ||||||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  1055190 ttgttgtaagcttggaagacatttgttcacattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 1055274  T

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Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 43988644 - 43988709
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg 120  Q
    |||||||| |||||||| ||||||| |||||| ||||| | |||||||||||||||||||||||||    
T  43988644 ttgttgttagcttggaagccatttgctctcatagattatctctatcacttgctccacacatcattg 43988709  T

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Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 24787564 - 24787624
Alignment:
Q  62 ttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgttt 123  Q
    ||||||||||||||||| | |||||  |||||||||||| ||||||||||||||| ||||||    
T  24787564 ttgcttggaaaccattt-tgctcatttattaccactatctcttgctccacacatctttgttt 24787624  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 19359079 - 19359132
Alignment:
Q  103 ttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 159  Q
    |||||||||||||| |||||||   ||||||||||||||| ||||||| ||||||||    
T  19359079 ttgctccacacatctttgttta---cattggtgtgagttttaaccggattcacaaca 19359132  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 24203001 - 24203054
Alignment:
Q  103 ttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 159  Q
    |||||||||||||| ||||||   |||||||||||||||| ||||||| ||||||||    
T  24203001 ttgctccacacatctttgttt---tcattggtgtgagttttaaccggattcacaaca 24203054  T

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Target: scaffold0127 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 34132 - 34211
Alignment:
Q  60 gtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  34132 gtttgcttggagaccatttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 34211  T

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Target: scaffold0464 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 269 - 185
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    ||||||||||||||||| |||||||||||||| ||||| ||| ||||||||||||||||||| || |||||||||||||||||||    
T  269 ttgttgtttgcttggaagccatttgttctcattgattatcaccatcacttgctccacacatctttggtttatttcattggtgtga 185  T

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Target: scaffold0355 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 9818 - 9902
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    |||||||||| ||||| |||||||| |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  9818 ttgttgtttggttggagaccatttgctctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 9902  T

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Target: scaffold0355; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 65 - 143
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    ||||||||| |||||| |||||||| |||||| |||||      ||||||||||||||||||||| |||||||| ||||||||||    
T  65 ttgttgtttacttggagaccatttgctctcattgatta------tcacttgctccacacatcattggtttatttaattggtgtga 143  T

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Target: scaffold0978 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 433 - 528
Alignment:
Q  62 ttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaacag 160  Q
    ||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||| ||||   |||||||||||||||||| ||  ||| |||||||||    
T  433 ttgcttggaaaccatttttgctcatagattaccactatctcttgctccacacatctttgt---tttcattggtgtgagttttaaatggattcacaacag 528  T

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Target: scaffold0479 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 13233 - 13171
Alignment:
Q  77 ttgttctcatcgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 138  Q
    |||||||||| ||||| ||||||||||||||||||| ||| || |||||||||||||||||||    
T  13233 ttgttctcattgattatcactatcacttgctccacatatctttggtttatttcattggtgtga 13171  T

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Target: scaffold0197 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 19343 - 19428
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||| |||||||  |||||||  ||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  19343 ttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 19428  T

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Target: scaffold0197; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 14497 - 14573
Alignment:
Q  64 gcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||  |||||||  ||||| ||||||| ||||| ||||||||||||||| ||| |||||| ||||||||||||    
T  14497 gcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtga 14573  T

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Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 149134 - 149219
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||| |||||||  |||||||  ||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  149134 ttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 149219  T

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Target: scaffold0259 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 2429 - 2514
Alignment:
Q  55 ttgttgtttgcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||| |||||||  |||||||  ||||| ||||| |  |||||||||||||||||||||||| |||||| ||||||||||||    
T  2429 ttgttgttagcttggaggccatttgcactcatggattatctttatcacttgctccacacatcattgatttattctcattggtgtga 2514  T

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Target: scaffold0188 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 24278 - 24331
Alignment:
Q  103 ttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 159  Q
    |||||||||||||| |||||||   ||||||||||||||| ||||||| ||||||||    
T  24278 ttgctccacacatctttgttta---cattggtgtgagttttaaccggattcacaaca 24331  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 182152 - 182228
Alignment:
Q  64 gcttggaaaccatttgttctcatcgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 138  Q
    |||||||  |||||||  ||||| ||||||| ||||| ||||||||||||||| ||| |||||| ||||||||||||    
T  182152 gcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtga 182228  T

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