View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13402_low_1 (Length: 201)

Name: NF13402_low_1
Description: NF13402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13402_low_1
NF13402_low_1
[»] chr8 (47 HSPs)
chr8 (14-187)||(37669524-37669689)
chr8 (6-90)||(38389099-38389182)
chr8 (8-89)||(33015-33096)
chr8 (14-187)||(43770700-43770866)
chr8 (14-89)||(12579616-12579691)
chr8 (14-89)||(32760310-32760385)
chr8 (9-89)||(20182800-20182880)
chr8 (19-87)||(27108802-27108870)
chr8 (17-89)||(36484382-36484454)
chr8 (9-89)||(5817959-5818038)
chr8 (112-181)||(2871506-2871575)
chr8 (9-90)||(37372658-37372739)
chr8 (6-89)||(41098547-41098631)
chr8 (9-89)||(3892375-3892454)
chr8 (14-182)||(4246881-4247041)
chr8 (111-181)||(16385081-16385151)
chr8 (14-89)||(32638301-32638376)
chr8 (18-181)||(32878017-32878171)
chr8 (14-181)||(34900374-34900532)
chr8 (14-181)||(28875568-28875727)
chr8 (17-187)||(19436811-19436973)
chr8 (17-187)||(19572960-19573122)
chr8 (123-181)||(6029117-6029175)
chr8 (121-187)||(19947374-19947440)
chr8 (123-181)||(22200823-22200881)
chr8 (121-187)||(25022807-25022873)
chr8 (129-181)||(7412959-7413011)
chr8 (121-181)||(36484479-36484539)
chr8 (17-89)||(25022713-25022784)
chr8 (9-48)||(40412976-40413015)
chr8 (14-89)||(45216306-45216382)
chr8 (34-89)||(2871589-2871644)
chr8 (14-89)||(13422576-13422651)
chr8 (56-89)||(27886640-27886673)
chr8 (56-89)||(27945298-27945331)
chr8 (56-89)||(27968555-27968588)
chr8 (56-89)||(28025541-28025574)
chr8 (129-180)||(3892481-3892532)
chr8 (58-89)||(8170617-8170648)
chr8 (17-89)||(19947463-19947534)
chr8 (14-89)||(22200908-22200984)
chr8 (17-89)||(42949628-42949699)
chr8 (10-48)||(8170752-8170790)
chr8 (111-181)||(13422664-13422734)
chr8 (14-89)||(16384993-16385067)
chr8 (119-169)||(32638229-32638279)
chr8 (111-181)||(45216225-45216292)
[»] chr4 (46 HSPs)
chr4 (9-181)||(1177389-1177554)
chr4 (9-182)||(42629997-42630163)
chr4 (14-187)||(53324631-53324796)
chr4 (22-187)||(46431477-46431633)
chr4 (17-89)||(51859214-51859286)
chr4 (121-187)||(258621-258687)
chr4 (9-187)||(10258461-10258631)
chr4 (9-181)||(31945770-31945934)
chr4 (14-90)||(41146561-41146637)
chr4 (9-89)||(47607512-47607592)
chr4 (14-89)||(14795965-14796040)
chr4 (9-181)||(40694481-40694645)
chr4 (14-89)||(52573143-52573218)
chr4 (14-181)||(5325020-5325179)
chr4 (121-181)||(38491781-38491841)
chr4 (14-181)||(8063100-8063258)
chr4 (121-182)||(24784986-24785047)
chr4 (121-182)||(24823219-24823280)
chr4 (111-180)||(44521568-44521637)
chr4 (9-89)||(30683286-30683367)
chr4 (8-89)||(51675198-51675278)
chr4 (121-181)||(52122220-52122280)
chr4 (9-89)||(36511557-36511637)
chr4 (18-87)||(49470712-49470780)
chr4 (9-89)||(14614908-14614986)
chr4 (111-173)||(19739154-19739216)
chr4 (18-89)||(31227451-31227522)
chr4 (111-181)||(43509440-43509510)
chr4 (28-89)||(52122304-52122365)
chr4 (15-89)||(19739064-19739139)
chr4 (121-187)||(28377554-28377620)
chr4 (111-181)||(39958307-39958377)
chr4 (111-173)||(42472177-42472239)
chr4 (112-182)||(51859301-51859371)
chr4 (112-181)||(44121415-44121484)
chr4 (56-89)||(52721928-52721961)
chr4 (9-48)||(7952779-7952818)
chr4 (9-48)||(24784805-24784844)
chr4 (9-48)||(24823422-24823461)
chr4 (18-89)||(42472255-42472327)
chr4 (17-89)||(43509524-43509595)
chr4 (121-160)||(49470803-49470842)
chr4 (9-48)||(52721787-52721826)
chr4 (122-180)||(31227547-31227604)
chr4 (15-88)||(3402663-3402737)
chr4 (56-89)||(18569169-18569202)
[»] chr5 (57 HSPs)
chr5 (6-90)||(5722427-5722511)
chr5 (9-89)||(35746021-35746101)
chr5 (14-181)||(39689731-39689891)
chr5 (9-89)||(18001583-18001663)
chr5 (9-89)||(41233728-41233808)
chr5 (9-89)||(42365728-42365808)
chr5 (9-89)||(43357387-43357467)
chr5 (9-187)||(30284115-30284285)
chr5 (12-89)||(11907721-11907798)
chr5 (121-181)||(30919200-30919260)
chr5 (9-181)||(34032779-34032940)
chr5 (14-181)||(1638796-1638953)
chr5 (9-87)||(1921194-1921272)
chr5 (11-89)||(21251897-21251975)
chr5 (8-89)||(5612078-5612159)
chr5 (25-181)||(10657414-10657561)
chr5 (13-89)||(27085789-27085864)
chr5 (9-181)||(27938570-27938733)
chr5 (9-85)||(22738264-22738339)
chr5 (9-89)||(9654161-9654242)
chr5 (121-181)||(30776838-30776898)
chr5 (121-181)||(32707182-32707242)
chr5 (8-89)||(39796571-39796652)
chr5 (9-89)||(25750017-25750097)
chr5 (9-89)||(1795805-1795883)
chr5 (9-47)||(3934456-3934494)
chr5 (14-89)||(7977603-7977678)
chr5 (129-175)||(17137733-17137779)
chr5 (111-181)||(41392250-41392320)
chr5 (121-187)||(1921295-1921363)
chr5 (111-176)||(26716779-26716844)
chr5 (111-176)||(26986519-26986584)
chr5 (14-89)||(30919102-30919176)
chr5 (28-89)||(32707266-32707327)
chr5 (9-48)||(6242676-6242715)
chr5 (9-48)||(26692050-26692089)
chr5 (9-48)||(26961782-26961821)
chr5 (9-48)||(30777056-30777095)
chr5 (13-89)||(3701500-3701578)
chr5 (9-89)||(9728011-9728095)
chr5 (121-187)||(35745932-35745998)
chr5 (121-187)||(43357298-43357364)
chr5 (14-181)||(9793250-9793409)
chr5 (56-89)||(30776922-30776955)
chr5 (121-181)||(7977704-7977764)
chr5 (121-181)||(25750120-25750180)
chr5 (9-89)||(26716684-26716767)
chr5 (9-89)||(26986424-26986507)
chr5 (25-89)||(5985564-5985627)
chr5 (121-187)||(5722534-5722600)
chr5 (121-187)||(5985474-5985540)
chr5 (121-187)||(12190934-12191000)
chr5 (111-181)||(26793995-26794065)
chr5 (14-77)||(26794099-26794162)
chr5 (56-89)||(14836781-14836814)
chr5 (121-181)||(11907822-11907881)
chr5 (124-180)||(21252002-21252058)
[»] chr3 (63 HSPs)
chr3 (14-187)||(45532058-45532224)
chr3 (9-89)||(19421845-19421925)
chr3 (9-89)||(41741772-41741852)
chr3 (9-89)||(45347985-45348065)
chr3 (14-89)||(22610363-22610438)
chr3 (9-89)||(212927-213007)
chr3 (111-182)||(25936080-25936151)
chr3 (16-89)||(30787195-30787267)
chr3 (9-181)||(39664829-39664992)
chr3 (111-181)||(1529066-1529136)
chr3 (6-89)||(20509729-20509812)
chr3 (14-181)||(28705694-28705852)
chr3 (14-181)||(1678686-1678845)
chr3 (9-88)||(22289351-22289429)
chr3 (8-89)||(21157365-21157446)
chr3 (121-181)||(52684958-52685018)
chr3 (111-187)||(53192941-53193017)
chr3 (9-89)||(983603-983683)
chr3 (9-89)||(29916204-29916283)
chr3 (9-89)||(29965357-29965436)
chr3 (123-181)||(7328271-7328329)
chr3 (17-182)||(28882082-28882238)
chr3 (121-183)||(52501260-52501322)
chr3 (14-89)||(52504909-52504984)
chr3 (15-89)||(25322122-25322196)
chr3 (12-89)||(45056905-45056983)
chr3 (13-90)||(13748125-13748201)
chr3 (122-182)||(22289238-22289298)
chr3 (111-187)||(33241379-33241455)
chr3 (123-187)||(48333458-48333522)
chr3 (9-85)||(28548457-28548531)
chr3 (17-89)||(48123785-48123857)
chr3 (9-89)||(25701196-25701275)
chr3 (111-181)||(40499429-40499499)
chr3 (9-89)||(19349226-19349306)
chr3 (111-175)||(21005796-21005860)
chr3 (121-181)||(42230411-42230471)
chr3 (9-48)||(19878749-19878788)
chr3 (14-89)||(42464225-42464301)
chr3 (9-48)||(52684760-52684799)
chr3 (17-89)||(2123128-2123204)
chr3 (15-89)||(25936166-25936238)
chr3 (121-187)||(29916306-29916372)
chr3 (121-187)||(29965459-29965525)
chr3 (111-181)||(37996304-37996374)
chr3 (10-88)||(38888702-38888781)
chr3 (121-187)||(45348089-45348155)
chr3 (25-169)||(50286762-50286897)
chr3 (111-180)||(19421939-19422008)
chr3 (11-48)||(21006009-21006046)
chr3 (23-89)||(13352807-13352871)
chr3 (121-181)||(22610280-22610340)
chr3 (111-175)||(35390390-35390454)
chr3 (123-187)||(48334403-48334467)
chr3 (111-181)||(10224153-10224223)
chr3 (14-77)||(10224257-10224320)
chr3 (121-187)||(19349136-19349202)
chr3 (122-163)||(213032-213073)
chr3 (56-89)||(2566787-2566820)
chr3 (122-159)||(48123883-48123920)
chr3 (56-89)||(52684902-52684935)
chr3 (59-87)||(19877846-19877874)
chr3 (61-89)||(21005872-21005900)
[»] chr2 (43 HSPs)
chr2 (18-187)||(4169517-4169679)
chr2 (9-89)||(35996942-35997022)
chr2 (11-187)||(2319707-2319876)
chr2 (9-181)||(40431559-40431723)
chr2 (9-89)||(44157008-44157088)
chr2 (14-89)||(6496759-6496834)
chr2 (10-89)||(8482540-8482619)
chr2 (9-88)||(28746288-28746367)
chr2 (9-89)||(14216861-14216942)
chr2 (111-187)||(18301591-18301667)
chr2 (9-89)||(3564250-3564330)
chr2 (14-89)||(20537284-20537359)
chr2 (15-173)||(7877080-7877230)
chr2 (129-181)||(12206689-12206741)
chr2 (111-187)||(22571453-22571529)
chr2 (9-89)||(1005923-1006003)
chr2 (9-89)||(5588449-5588529)
chr2 (9-81)||(10573916-10573988)
chr2 (14-89)||(6125129-6125204)
chr2 (14-89)||(16562174-16562249)
chr2 (9-87)||(40536628-40536706)
chr2 (17-90)||(34146621-34146694)
chr2 (17-181)||(5371521-5371676)
chr2 (111-181)||(4562294-4562364)
chr2 (123-181)||(6496675-6496733)
chr2 (14-89)||(40307923-40307998)
chr2 (121-175)||(44157111-44157165)
chr2 (122-187)||(3564359-3564424)
chr2 (9-75)||(14824550-14824616)
chr2 (119-172)||(35342851-35342904)
chr2 (121-187)||(1006026-1006093)
chr2 (22-90)||(12206416-12206484)
chr2 (124-187)||(16562276-16562339)
chr2 (121-174)||(12819860-12819913)
chr2 (9-89)||(4562200-4562281)
chr2 (123-175)||(10574018-10574070)
chr2 (111-187)||(24586040-24586116)
chr2 (32-88)||(4356303-4356359)
chr2 (9-48)||(31235832-31235871)
chr2 (8-87)||(24585946-24586028)
chr2 (121-158)||(31235733-31235770)
chr2 (120-181)||(37354502-37354563)
chr2 (111-159)||(21104997-21105045)
[»] chr6 (28 HSPs)
chr6 (6-88)||(6707612-6707694)
chr6 (9-89)||(7255351-7255431)
chr6 (9-88)||(22988749-22988828)
chr6 (9-88)||(23799568-23799647)
chr6 (123-187)||(13607293-13607357)
chr6 (9-89)||(19128565-19128645)
chr6 (14-89)||(8357837-8357912)
chr6 (123-187)||(3213201-3213265)
chr6 (9-89)||(234726-234806)
chr6 (9-89)||(3299470-3299550)
chr6 (9-89)||(27084385-27084464)
chr6 (14-181)||(1035819-1035977)
chr6 (8-89)||(26327753-26327835)
chr6 (17-89)||(13044986-13045059)
chr6 (121-181)||(31186957-31187017)
chr6 (9-89)||(4153168-4153247)
chr6 (17-89)||(31738255-31738327)
chr6 (9-47)||(13607424-13607462)
chr6 (14-89)||(7187865-7187939)
chr6 (17-89)||(13060979-13061052)
chr6 (122-180)||(7255455-7255513)
chr6 (129-187)||(13060890-13060948)
chr6 (56-89)||(3213142-3213175)
chr6 (12-90)||(11105723-11105800)
chr6 (9-48)||(3213002-3213041)
chr6 (9-48)||(32018529-32018568)
chr6 (111-181)||(32018700-32018770)
chr6 (121-187)||(32130056-32130122)
[»] chr1 (43 HSPs)
chr1 (9-89)||(9782055-9782135)
chr1 (9-89)||(29862211-29862291)
chr1 (9-175)||(33040790-33040947)
chr1 (14-181)||(28948209-28948369)
chr1 (8-89)||(9528471-9528552)
chr1 (15-181)||(30324665-30324820)
chr1 (14-89)||(10764051-10764126)
chr1 (111-187)||(13012385-13012461)
chr1 (9-89)||(10822805-10822885)
chr1 (14-181)||(3427802-3427960)
chr1 (121-187)||(4027363-4027429)
chr1 (14-89)||(5985131-5985206)
chr1 (14-181)||(25257559-25257716)
chr1 (111-181)||(36363068-36363138)
chr1 (9-87)||(29168358-29168436)
chr1 (17-89)||(28658488-28658560)
chr1 (9-89)||(34096179-34096259)
chr1 (9-89)||(37922625-37922705)
chr1 (14-181)||(6915867-6916025)
chr1 (14-181)||(8133124-8133282)
chr1 (17-181)||(37346359-37346515)
chr1 (121-187)||(38218878-38218944)
chr1 (14-181)||(38331394-38331552)
chr1 (6-48)||(47656139-47656181)
chr1 (14-181)||(52894706-52894864)
chr1 (122-187)||(31652812-31652877)
chr1 (15-89)||(38949098-38949172)
chr1 (28-89)||(1036947-1037008)
chr1 (28-89)||(1043853-1043914)
chr1 (123-175)||(3703835-3703887)
chr1 (9-89)||(15417980-15418061)
chr1 (111-182)||(20409113-20409184)
chr1 (9-175)||(32380608-32380765)
chr1 (10-48)||(24851904-24851942)
chr1 (123-181)||(37104695-37104753)
chr1 (121-181)||(10822908-10822968)
chr1 (121-181)||(29168462-29168522)
chr1 (16-89)||(4027452-4027523)
chr1 (15-48)||(2472650-2472683)
chr1 (58-90)||(3703900-3703932)
chr1 (121-187)||(10764150-10764216)
chr1 (121-183)||(28658402-28658464)
chr1 (125-187)||(5985234-5985298)
[»] chr7 (58 HSPs)
chr7 (14-186)||(27397115-27397280)
chr7 (6-90)||(33454532-33454617)
chr7 (9-181)||(554435-554597)
chr7 (9-89)||(23078714-23078794)
chr7 (9-89)||(26973469-26973549)
chr7 (9-89)||(44958942-44959022)
chr7 (9-89)||(19820602-19820683)
chr7 (9-89)||(35136437-35136517)
chr7 (9-89)||(44270150-44270230)
chr7 (123-187)||(16563752-16563816)
chr7 (123-187)||(16601846-16601910)
chr7 (9-89)||(21180248-21180329)
chr7 (9-175)||(36413777-36413936)
chr7 (15-173)||(42897347-42897497)
chr7 (13-89)||(36763398-36763473)
chr7 (129-187)||(26843568-26843626)
chr7 (14-89)||(36661415-36661489)
chr7 (14-89)||(39521520-39521595)
chr7 (14-181)||(40096614-40096772)
chr7 (111-181)||(47718695-47718765)
chr7 (111-181)||(48154554-48154624)
chr7 (121-182)||(19511209-19511270)
chr7 (111-180)||(27554861-27554930)
chr7 (121-181)||(9249739-9249799)
chr7 (121-181)||(9283289-9283349)
chr7 (121-181)||(25970134-25970194)
chr7 (15-88)||(47237836-47237909)
chr7 (17-89)||(21409805-21409877)
chr7 (121-187)||(35160396-35160462)
chr7 (13-89)||(36757619-36757693)
chr7 (13-89)||(36767143-36767217)
chr7 (121-181)||(1042583-1042643)
chr7 (111-187)||(8029341-8029417)
chr7 (121-181)||(12103486-12103546)
chr7 (9-48)||(9249957-9249996)
chr7 (9-48)||(9283507-9283546)
chr7 (14-89)||(11830644-11830720)
chr7 (8-89)||(24956654-24956734)
chr7 (9-48)||(25969937-25969976)
chr7 (14-89)||(26843659-26843735)
chr7 (122-181)||(34122148-34122207)
chr7 (13-89)||(35160300-35160375)
chr7 (6-48)||(38065119-38065161)
chr7 (123-181)||(38065231-38065289)
chr7 (121-187)||(44958852-44958918)
chr7 (56-89)||(9249823-9249856)
chr7 (56-89)||(9283373-9283406)
chr7 (56-89)||(25970077-25970110)
chr7 (112-181)||(26773095-26773164)
chr7 (17-83)||(48153960-48154026)
chr7 (17-89)||(1042666-1042739)
chr7 (121-181)||(4292211-4292271)
chr7 (9-89)||(11058844-11058925)
chr7 (136-175)||(39521633-39521672)
chr7 (58-89)||(47718780-47718811)
chr7 (122-180)||(26973573-26973631)
chr7 (121-158)||(16851355-16851392)
chr7 (121-181)||(21180352-21180412)
[»] scaffold0005 (2 HSPs)
scaffold0005 (14-89)||(43691-43766)
scaffold0005 (9-89)||(202390-202468)
[»] scaffold0177 (2 HSPs)
scaffold0177 (121-181)||(24900-24960)
scaffold0177 (28-89)||(24984-25045)
[»] scaffold0640 (1 HSPs)
scaffold0640 (28-89)||(7522-7583)
[»] scaffold0285 (1 HSPs)
scaffold0285 (6-89)||(13827-13911)
[»] scaffold0250 (1 HSPs)
scaffold0250 (122-175)||(6184-6237)
[»] scaffold0060 (1 HSPs)
scaffold0060 (56-89)||(29731-29764)


Alignment Details
Target: chr8 (Bit Score: 64; Significance: 3e-28; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 37669524 - 37669689
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||         ||    ||| | |||    
T  37669524 ctggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa--------ttttttttattaacgt 37669615  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    |||| | ||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  37669616 atcccagccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatctcgtat 37669689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 38389099 - 38389182
Alignment:
Q  6 agatatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaa 90  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||    
T  38389099 agatatgactggtttcttttgtttgttaatatatttgcatattaaaaaaatgg-tataattatattgtacatttaattatataaa 38389182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 33015 - 33096
Alignment:
Q  8 atatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||| ||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||    
T  33015 atatgactggtttcttttatttgttaatatgtttgcatattcaaaaaatggttataattatattgtacatttaattatataa 33096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 43770866 - 43770700
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| || ||||||||||| |||||||||       ||||||||||||||||||| ||||||||||||||         ||    ||| | |||    
T  43770866 ctggtttcttgtgattgttaatatacttgcatattaaaaaaatggttataattatattgtaaatttaattatataatt-------tttttttattaacgt 43770774  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    |||| | ||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  43770773 atcccagccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatctcgtat 43770700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 12579691 - 12579616
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  12579691 ctggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 12579616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 32760310 - 32760385
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  32760310 ctggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 32760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 20182800 - 20182880
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| |||||||||||||||||||||||||||||||       |||||||||||||||| || ||||||||||||||    
T  20182800 tatgactgatttcttttgtttgttaatatatttgcatattaaaaaaatggttataattatattatatatttaattatataa 20182880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 27108870 - 27108802
Alignment:
Q  19 ttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatat 87  Q
    ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  27108870 ttcttttgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatat 27108802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 36484382 - 36484454
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  36484382 gtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 36484454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 5818038 - 5817959
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| ||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  5818038 tatgactgatttattttgtttgttaatatatttgcatattaaaaaa-tggttataattatattgtacatttaattatataa 5817959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 2871575 - 2871506
Alignment:
Q  112 gtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||||| | ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||    
T  2871575 gtatcccagccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 2871506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 37372658 - 37372739
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaa 90  Q
    |||||||||||||||||||||||||||| ||||| |||||       ||||| |||||||| ||||||||||||||||||||    
T  37372658 tatgactggtttcttttgtttgttaatacatttgtatattaaaaaaatggttttaattatactgtacatttaattatataaa 37372739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 41098631 - 41098547
Alignment:
Q  6 agatatgactggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||| |||||||| | ||||||        ||||||||||||||||||||||||||||||||||    
T  41098631 agatatgactggtttcttttgtttgctaatatatcttcatattaaaaaaaatggttataattatattgtacatttaattatataa 41098547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 3892375 - 3892454
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||| |||||||  ||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  3892375 tatgactggtttattttgttatttaatatatttgcatattaaaaaa-tggttataattatattgtacatttaattatataa 3892454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 182
Target Start/End: Original strand, 4246881 - 4247041
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| ||||||| |       ||||||||||||||| ||||||||||||||||||         ||    ||| | |||    
T  4246881 ctggtttcttgtgtttgttaatatacttgcataataaaaaaatggttataattatatagtacatttaattatataat--------tttttttattaacgt 4246972  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatct 182  Q
    |||| | || |||| |||||| ||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  4246973 atcccagccatatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatct 4247041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 16385081 - 16385151
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | ||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  16385081 cgtatcccagccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 16385151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 32638376 - 32638301
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| ||||||||||||||||| ||||||       || |||||||||||||||||||||||||||||||    
T  32638376 ctggtttcttgtgtttgttaatatattttcatattaaaagaatgattataattatattgtacatttaattatataa 32638301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 32878017 - 32878171
Alignment:
Q  18 tttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgtatcc 117  Q
    |||||| ||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||         ||    ||| | |||||||    
T  32878017 tttcttgtgtttgttaatatatttgcatattaaaaaaaaggttataattatattatacatttaattatataa---------tttttttattaacgtatcc 32878107  T
Q  118 aaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
     | ||||||| |||||| ||||||||| |||| |||||||| |||||||||||||||| |||||    
T  32878108 cagccgtatcgtatcttgatttttgaaattttcccgtatcggcgtatcggtgcagtatcgtatc 32878171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 34900532 - 34900374
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| ||||||| |       ||||||||||||||| ||||||||||||||||||         ||    ||| | |||    
T  34900532 ctggtttcttgtgtttgttaatatacttgcataataaaaaaatggttataattatatagtacatttaattatataa---------tttttttattaacgt 34900442  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||  | ||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||    
T  34900441 atctcagccgtatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatc 34900374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 28875727 - 28875568
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||  |||||||||       | ||||||||||||||||||||||||||||||||         ||    ||| | |||    
T  28875727 ctggtttcttgtgtttgttaatatccttgcatattaaaaaaatagttataattatattgtacatttaattatataat--------tttttttattaacgt 28875636  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||| | ||||||| |||||| ||||||||| ||||||||||||| ||||||| |||||||| |||||    
T  28875635 atcccagccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcgatgcagtatcgtatc 28875568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 19436811 - 19436973
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgtatc 116  Q
    ||||||| ||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||         ||    ||| | ||||||    
T  19436811 gtttcttgtgtttgttaatatatttgcatattaaaaaaaaggttataattatattatacatttaattatataat--------tttttttattaacgtatc 19436902  T
Q  117 caaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
      | ||||||| |||||| ||||||||| |||| ||||||| | ||||||||||||||| |||||||||||    
T  19436903 tcagccgtatcgtatcttgatttttgaaattttcccgtatcaatgtatcggtgcagtatcgtatctcgtat 19436973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 19572960 - 19573122
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgtatc 116  Q
    ||||||| ||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||         ||    ||| | ||||||    
T  19572960 gtttcttgtgtttgttaatatatttgcatattaaaaaaaaggttataattatattatacatttaattatataat--------tttttttattaacgtatc 19573051  T
Q  117 caaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
      | ||||||| |||||| ||||||||| |||| ||||||| | ||||||||||||||| |||||||||||    
T  19573052 tcagccgtatcgtatcttgatttttgaaattttcccgtatcaatgtatcggtgcagtatcgtatctcgtat 19573122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 6029117 - 6029175
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| |||||    
T  6029117 gtatcgtatcttgatttttgaaatttttctgtatcgacgtatcggtgcagtatcgtatc 6029175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 19947440 - 19947374
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| ||||||||| ||||  |||||| ||||||||||||||||| |||||||||||    
T  19947440 ccgtatcgtatcttgatttttgaaattttcacgtatcaacgtatcggtgcagtatcgtatctcgtat 19947374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 22200881 - 22200823
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  22200881 gtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 22200823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 25022807 - 25022873
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| ||||||||| |||| ||||||| ||||||||||||||||| |||||| ||||    
T  25022807 ccgtatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatctagtat 25022873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 7412959 - 7413011
Alignment:
Q  129 tatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||||||||||||||||||||||||||| |||| | |||||||| |||||    
T  7412959 tatcttaatttttgaattttttccgtatcgaagtattgatgcagtatcgtatc 7413011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 36484479 - 36484539
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| |||||||||  ||||||||||||||||||| ||||||||| |||||    
T  36484479 ccgtatcgtatcttgatttttgaaaattttccgtatcgacgtatcagtgcagtatcgtatc 36484539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 25022713 - 25022784
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||| ||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||    
T  25022713 gtttcttgtgtttgttaatatatttgcatattaaaaaaa-ggttataattatattatacatttaattatataa 25022784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 40412976 - 40413015
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  40412976 tatgactggtttcttgtgtttgttaatatatttgcatatt 40413015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 45216382 - 45216306
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||| |||||||||        |||||| |||||||||||||||||||||||||||    
T  45216382 ctggtttcttgtgtttgttaatatacttgcatattaaaaaaaatggttacaattatattgtacatttaattatataa 45216306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 2871644 - 2871589
Alignment:
Q  34 atatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  2871644 atatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 2871589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 13422576 - 13422651
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||| | |||||||||       ||||||||||||||  ||||||||||||||||||    
T  13422576 ctggtttcttgtgtttgttaataaacttgcatattaaaaaaatggttataattataaagtacatttaattatataa 13422651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 27886640 - 27886673
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||    
T  27886640 tggttataattatattgtacatttaattatataa 27886673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 27945298 - 27945331
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||    
T  27945298 tggttataattatattgtacatttaattatataa 27945331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 27968555 - 27968588
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||    
T  27968555 tggttataattatattgtacatttaattatataa 27968588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 28025541 - 28025574
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||    
T  28025541 tggttataattatattgtacatttaattatataa 28025574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 3892481 - 3892532
Alignment:
Q  129 tatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtat 180  Q
    |||||||||||||||| |||||||||||| || |||||||||| ||| ||||    
T  3892481 tatcttaatttttgaaatttttccgtatcaacatatcggtgcaatatcgtat 3892532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 89
Target Start/End: Complemental strand, 8170648 - 8170617
Alignment:
Q  58 gttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||    
T  8170648 gttataattatattgtacatttaattatataa 8170617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 19947534 - 19947463
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||| |||||| |||||||||||||||||        ||||||||||||||| |||||||||||||||||    
T  19947534 gtttcttgtgtttgctaatatatttgcatattaaaaaaa-ggttataattatattatacatttaattatataa 19947463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 22200984 - 22200908
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcat-attnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| ||||||||||||||||||||| ||        |||||||||||||||  |||||||||||||||||    
T  22200984 ctggtttcttgtgtttgttaatatatttgcataataaaaaaaatggttataattatataatacatttaattatataa 22200908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 42949628 - 42949699
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||| ||||||||||||||||| ||||||        ||||||||||||||| |||||||||||||||||    
T  42949628 gtttcttgtgtttgttaatatatttacatattaaaaaaa-ggttataattatattatacatttaattatataa 42949699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 8170790 - 8170752
Alignment:
Q  10 atgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  8170790 atgactggtttcttgtgtttggtaatatatttgcatatt 8170752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 13422664 - 13422734
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | ||||||| |||||| |||||| ||  |||||| ||||| |||||||||||||||| |||||    
T  13422664 cgtatcccagccgtatcgtatcttgatttttaaaaattttccatatcggcgtatcggtgcagtatcgtatc 13422734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 16384993 - 16385067
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||| |||||||||       ||||||| |||||||  |||||||||||||||||    
T  16384993 ctggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttat-attatataatacatttaattatataa 16385067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 32638279 - 32638229
Alignment:
Q  119 aaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtg 169  Q
    ||||||||| |||||| ||||||||| |||||||||||||  |||||||||    
T  32638279 aaccgtatcgtatcttgatttttgaaatttttccgtatcggtgtatcggtg 32638229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 45216292 - 45216225
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||||||   |||| ||||||||| ||||||  |||||||||||| ||||||||| |||||    
T  45216292 cgtatcccaaccgtatc---tcttgatttttgaaatttttctatatcgacgtatcagtgcagtatcgtatc 45216225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 1e-27; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 1177389 - 1177554
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatg 108  Q
    ||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||         ||    |||     
T  1177389 tatgactggtttcttttgtttgttaatatgtttgcatattaaaaaaatggttataattatattgtacatttaattatataa-------tttttttttatt 1177481  T
Q  109 agcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    | ||||||  ||||||||| |||||| ||||||||| |||||||||||||||||||| ||||||||| |||||    
T  1177482 aacgtatcacaaccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcagtgcagtatcgtatc 1177554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 42630163 - 42629997
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatg 108  Q
    |||||||| || ||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||         ||    |||     
T  42630163 tatgactgtttccttttgtttgttaatatatttgcatattaaaaaaatggttataattatattgtatatttaattatataatt-------tttttttatt 42630071  T
Q  109 agcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatct 182  Q
    | ||||||  | ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  42630070 aacgtatctcagccgtatcgtatcttaatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatct 42629997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 53324631 - 53324796
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| ||||||||||| ||||||||||||       |||||||||| |||||||||||||||||||||||         ||    ||| | |||    
T  53324631 ctggtttcttgtgtttgttaatttatttgcatattaaaaaaatggttataatcatattgtacatttaattatataat--------tttttttattaacgt 53324722  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    |||  | ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  53324723 atcacagccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatctcgtat 53324796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 46431633 - 46431477
Alignment:
Q  22 ttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgtatccaaac 121  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||| |||||||||||         ||   |||| | ||||| | | |    
T  46431633 ttttgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatataattatataa---------tttttgtattaacgtattctagc 46431543  T
Q  122 cgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    |||||| |||||| ||||||||| ||||| ||||||||| |||||||||||||| |||||||||||    
T  46431542 cgtatcgtatcttgatttttgaaattttttcgtatcgacatatcggtgcagtatcgtatctcgtat 46431477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 51859214 - 51859286
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  51859214 gtttcttttgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 51859286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 258687 - 258621
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  258687 ccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatctcgtat 258621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 10258461 - 10258631
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataaannnnnnnattagcgtat 107  Q
    |||||||||||||||||||||| |||||||||||||||||        |||||||||||||||| |||||||||||||||||         ||    |||    
T  10258461 tatgactggtttcttttgtttgataatatatttgcatattaaataaaatggttataattatattctacatttaattatataa---------tttttttat 10258551  T
Q  108 gagcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
       ||||||| |||| |||| |||||| ||||||||| ||||| ||||| |||||||||||||||||| |||||||||||    
T  10258552 tgacgtatcccaaccatatcgtatcttgatttttgaaattttttcgtattgacgtatcggtgcagtatcgtatctcgtat 10258631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 31945934 - 31945770
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatg 108  Q
    |||||||||||| ||||||||||||||||||||| |||||       ||||||||||||||||||||||| |||| |||||         ||    |||     
T  31945934 tatgactggtttattttgtttgttaatatatttgtatattaaaaaaatggttataattatattgtacattaaattttataat--------tttttttatt 31945843  T
Q  109 agcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    | ||||||| |  |||||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  31945842 aacgtatcccagtcgtatcgtatcttaatttttgaaattttcccgtatcgacgtatcggtgcagtatcgtatc 31945770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 41146561 - 41146637
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaa 90  Q
    |||||||||| ||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||||    
T  41146561 ctggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattatacatttaattatataaa 41146637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 47607512 - 47607592
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| |||||||||||||||||||||||||||||||       | |||||||||||||| |||||||||||||||||    
T  47607512 tatgactgatttcttttgtttgttaatatatttgcatattaaaaaaattgttataattatattatacatttaattatataa 47607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 14795965 - 14796040
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||    
T  14795965 ctggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttataattatattgtacatttaattatataa 14796040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 40694481 - 40694645
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatg 108  Q
    |||||||| |||| ||||||||||||||||||||||||||       |||||||||||||||| || ||||||||||||||         ||    |||     
T  40694481 tatgactgatttcctttgtttgttaatatatttgcatattaaaaaaatggttataattatattctaaatttaattatataa--------ttttttttatt 40694572  T
Q  109 agcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    | ||||||| | ||||||| |||||||||||||||| |||| ||||||| ||||||  |||||||||||||||    
T  40694573 aacgtatcccagccgtatcgtatcttaatttttgaaattttcccgtatcaacgtattcgtgcagtattgtatc 40694645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 52573143 - 52573218
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| ||||||||||||||||||||||||       |||||||||||||||| |||||||||||||||||    
T  52573143 ctggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattttacatttaattatataa 52573218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 5325179 - 5325020
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| |||||||||       |||||| |||||||||||||||||||||||||||         ||    ||| | |||    
T  5325179 ctggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttacaattatattgtacatttaattatataa--------ttttttttattaacgt 5325088  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||| | ||||||| |||||| ||||||||| ||||| ||||||| |||||||||||||||| |||||    
T  5325087 atcccagccgtatcgtatcttgatttttgaaattttttcgtatcggcgtatcggtgcagtatcgtatc 5325020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 38491841 - 38491781
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||    
T  38491841 ccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 38491781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 8063258 - 8063100
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| ||||||| |       ||||||||||||||| ||||||||||||||||||         ||    ||| | |||    
T  8063258 ctggtttcttgtgtttgttaatatacttgcataataaaaaaatggttataattatatagtacatttaattatataa---------tttttttattaacgt 8063168  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||  | ||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||    
T  8063167 atctcagccgtatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatc 8063100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 24784986 - 24785047
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatct 182  Q
    ||||||| |||||| |||||||||  ||||||||||| ||||||||||||||||||||||||    
T  24784986 ccgtatcgtatcttgatttttgaaaattttccgtatcaacgtatcggtgcagtattgtatct 24785047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 24823280 - 24823219
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatct 182  Q
    ||||||| |||||| |||||||||  ||||||||||| ||||||||||||||||||||||||    
T  24823280 ccgtatcgtatcttgatttttgaaaattttccgtatcaacgtatcggtgcagtattgtatct 24823219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 44521637 - 44521568
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtat 180  Q
    ||||||| | ||||||| |||||| ||||||||| ||||||||||| |||||||||||||||||| ||||    
T  44521637 cgtatcccagccgtatcgtatcttgatttttgaaatttttccgtatagacgtatcggtgcagtatcgtat 44521568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 30683367 - 30683286
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataa 89  Q
    |||| |||||||||| ||||||||||||||||||||||||        | ||||||||||||||||||||||||||||||||    
T  30683367 tatggctggtttcttgtgtttgttaatatatttgcatattaaaaaaaattgttataattatattgtacatttaattatataa 30683286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 51675198 - 51675278
Alignment:
Q  8 atatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| |||| ||||||||||||||||||| |||||||       |||||||||||||||| |||||||||||||||||    
T  51675198 atatgacttgtttattttgtttgttaatatatt-gcatattaaaaaaatggttataattatattatacatttaattatataa 51675278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 52122280 - 52122220
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  52122280 ccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 52122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 36511637 - 36511557
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||| |||||||||||||||||||||| ||| ||||||       ||||||| ||||||||||| ||||||||||||||    
T  36511637 tatgaccggtttcttttgtttgttaatatgtttccatattaaaaaaatggttatgattatattgtaaatttaattatataa 36511557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 49470712 - 49470780
Alignment:
Q  18 tttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatat 87  Q
    |||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  49470712 tttcttatgtttgttaatatatttgcatattaaaaaa-tggttataattatattgtacatttaattatat 49470780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 14614908 - 14614986
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| ||||||||||||||||||||||||| |||||       |||||||| |||||||||| ||||||||||||||    
T  14614908 tatgactgatttcttttgtttgttaatatatttgtatatt--aaaaatggttatatttatattgtatatttaattatataa 14614986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 19739154 - 19739216
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagt 173  Q
    ||||||| | ||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||    
T  19739154 cgtatcccagccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagt 19739216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 31227451 - 31227522
Alignment:
Q  18 tttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||| |||||||||||||| ||| |||||       ||||||||||||||||||||||||||||||||||    
T  31227451 tttcttgtgtttgttaatatacttgaatattaaaaaaatggttataattatattgtacatttaattatataa 31227522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 43509510 - 43509440
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | ||||||| |||||| ||||||||| |||| ||||||| ||||||||||||||||| |||||    
T  43509510 cgtatcccagccgtatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 43509440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 52122365 - 52122304
Alignment:
Q  28 ttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||| |||||    
T  52122365 ttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattgtataa 52122304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 19739064 - 19739139
Alignment:
Q  15 tggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataa 89  Q
    ||||||||| |||||||||||||| |||||||||        ||||||||||||||| ||||||||||||||||||    
T  19739064 tggtttcttgtgtttgttaatatacttgcatattaaaaaaaatggttataattatatagtacatttaattatataa 19739139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 28377554 - 28377620
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| ||||||||| ||||  ||||||| |||||| ||||||||| |||||||||||    
T  28377554 ccgtatcgtatcttgatttttgaaattttctcgtatcggcgtatcagtgcagtatcgtatctcgtat 28377620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 39958307 - 39958377
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | ||||||| |||||| ||||||||| ||||| ||||||  |||||||||||||||| |||||    
T  39958307 cgtatcccagccgtatcgtatcttgatttttgaaattttttcgtatcagcgtatcggtgcagtatcgtatc 39958377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 42472239 - 42472177
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagt 173  Q
    ||||||| | ||||||| |||||| ||||||||| ||||||||||| | ||||||||||||||    
T  42472239 cgtatcccagccgtatcgtatcttgatttttgaaatttttccgtattggcgtatcggtgcagt 42472177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 51859301 - 51859371
Alignment:
Q  112 gtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatct 182  Q
    |||||| | ||||||| |||||| ||||||||| |||| |||| ||| |||||||||||||||| ||||||    
T  51859301 gtatcccagccgtatcgtatcttgatttttgaaattttcccgtgtcggcgtatcggtgcagtatcgtatct 51859371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 44121484 - 44121415
Alignment:
Q  112 gtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||||||||| ||||| |||||||| |||| || ||||  ||||||||||||||||| |||||| |||||    
T  44121484 gtatccaaactgtatcgtatcttaaattttaaaattttctcgtatcgacgtatcggtacagtatcgtatc 44121415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 52721928 - 52721961
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||    
T  52721928 tggttataattatattgtacatttaattatataa 52721961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 7952818 - 7952779
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  7952818 tatgactggtttcttgtgtttgttaatataattgcatatt 7952779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 24784805 - 24784844
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  24784805 tatgactgatttcttgtgtttgttaatatatttgcatatt 24784844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 24823461 - 24823422
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  24823461 tatgactgatttcttgtgtttgttaatatatttgcatatt 24823422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 42472327 - 42472255
Alignment:
Q  18 tttcttttgtttgttaatatatttgcatattnnnnnnnt-ggttataattatattgtacatttaattatataa 89  Q
    |||||| |||||||||||||| |||||||||       | |||||||||||||| ||||||||||||||||||    
T  42472327 tttcttgtgtttgttaatatacttgcatattaaaaaaattggttataattatatagtacatttaattatataa 42472255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 43509595 - 43509524
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||| ||||||||||||||||| ||||||        ||||||||||||||| |||||||||||||||||    
T  43509595 gtttcttgtgtttgttaatatattttcatattaaaaaaa-ggttataattatattatacatttaattatataa 43509524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 49470803 - 49470842
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgac 160  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  49470803 ccgtatcgtatcttaatttttgaaatttttccgtatcgac 49470842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 52721787 - 52721826
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  52721787 tatgactgatttcttgtgtttgttaatatatttgcatatt 52721826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 31227547 - 31227604
Alignment:
Q  122 cgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtat 180  Q
    |||||| |||||||||||||||| ||||| |||||||  ||||||||||||||| ||||    
T  31227547 cgtatcgtatcttaatttttgaaattttt-cgtatcggagtatcggtgcagtatcgtat 31227604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 3402737 - 3402663
Alignment:
Q  15 tggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatata 88  Q
    ||||||||| |||||||||||||| ||||||| |        ||||||||||||||| |||||||||||||||||    
T  3402737 tggtttcttgtgtttgttaatatacttgcataataaaaaaaatggttataattatatagtacatttaattatata 3402663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 18569169 - 18569202
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||| ||||||||||||||||||||||    
T  18569169 tggttataattctattgtacatttaattatataa 18569202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 8e-26; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 5722427 - 5722511
Alignment:
Q  6 agatatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaa 90  Q
    ||||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  5722427 agatatgactgatttcttttgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataaa 5722511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 35746101 - 35746021
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||    
T  35746101 tatgactggtttcttttgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacattttattatataa 35746021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 39689891 - 39689731
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||         ||    ||| | |||    
T  39689891 ctggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttataattatattgtacatttaattatataa-------tttttttttattaacgt 39689799  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||  | ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||    
T  39689798 atctcagccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 39689731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 18001663 - 18001583
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||| ||||||       |||||||||| |||||||||||||||||||||||    
T  18001663 tatgactggtttcttttgtttgttaatatatttacatattaaaataatggttataataatattgtacatttaattatataa 18001583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 41233728 - 41233808
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||| ||||||       | ||||||||||||||||||||||||||||||||    
T  41233728 tatgactggtttcttttgtttgttaatatatttacatattaaaaaaatagttataattatattgtacatttaattatataa 41233808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 42365808 - 42365728
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| |||||||||||||||||||||||| ||||||       ||||||||||||||||||||||||||||||||||    
T  42365808 tatgactgatttcttttgtttgttaatatattttcatattaaaaaaatggttataattatattgtacatttaattatataa 42365728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 43357467 - 43357387
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||| ||| ||||||       ||||||||||||||||||||||||||||||||||    
T  43357467 tatgactggtttcttttgtttgttaatatgtttacatattaaaaaaatggttataattatattgtacatttaattatataa 43357387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 30284285 - 30284115
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataaannnnnnnattagcgtat 107  Q
    |||||| ||||||||||| |||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||         ||    |||    
T  30284285 tatgaccggtttcttttgcttgttaatatatttgcatattaaaaaaaatggttataactatattgtacatttaattatataa---------tttttttat 30284195  T
Q  108 gagcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
     | ||||||| ||||||||| |||||| |||||| | ||||||| ||||||||||||||||||||||| |||||| ||||    
T  30284194 taacgtatcccaaccgtatcgtatcttgatttttaatttttttctgtatcgacgtatcggtgcagtatcgtatctggtat 30284115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 11907721 - 11907798
Alignment:
Q  12 gactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||| |||||||||||||||||| |||||       ||||||||||||||||||||||||||||||||||    
T  11907721 gactggtttcttgtgtttgttaatatatttgaatattaaaaaaatggttataattatattgtacatttaattatataa 11907798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 30919200 - 30919260
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  30919200 ccgtatcgtatcttgatttttgaattttttccgtatcgacgtatcggtgcagtatcgtatc 30919260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 34032779 - 34032940
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatg 108  Q
    |||||||| ||||||||||||||||||||||||| |||||        | ||||||||||||||||||||||||||||||          ||    |||     
T  34032779 tatgactgatttcttttgtttgttaatatatttgtatattaaaaaaaagattataattatattgtacatttaattatata-------ttttt----tatt 34032867  T
Q  109 agcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    | ||||||| | ||||||| |||||| ||||||||| ||||||||||||||||||||| |||||||| |||||    
T  34032868 aacgtatcccagccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcgatgcagtatcgtatc 34032940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 1638953 - 1638796
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| ||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||         ||    ||| | |||    
T  1638953 ctggtttcttgtgtttattaatatatttgcatattaaaaaa-tggttataattatattgtacatttaattatataa---------tttttttattaacgt 1638864  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||  | ||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  1638863 atcacagccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 1638796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 1921194 - 1921272
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatat 87  Q
    ||||||||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||  ||||||||||    
T  1921194 tatgactggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattgtaccattaattatat 1921272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 21251897 - 21251975
Alignment:
Q  11 tgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||| ||||| ||||||||||||||||||       ||||||||||||||||||||||||| ||||||||    
T  21251897 tgactggtttcttgtgtttattaatatatttgcatattaaaaaaatggttataattatattgtacatttacttatataa 21251975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 5612159 - 5612078
Alignment:
Q  8 atatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||  |||||||||||||||||||||       ||  ||||||||||||||||||||||||||||||    
T  5612159 atatgactggtttcttttacttgttaatatatttgcatattaaaaaaatgaatataattatattgtacatttaattatataa 5612078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 10657414 - 10657561
Alignment:
Q  25 tgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgtatccaaaccgt 124  Q
    ||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||         ||    ||| | ||||||| | ||||    
T  10657414 tgtttgttaatatatttgcatattaaaaaaaaggttataattatattatacatttaattatataa---------tttttttattaacgtatcccagccgt 10657504  T
Q  125 atcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||    
T  10657505 atcgtatcttgatttttgaaattttcccgtatcgacgtatcggtgcagtatcgtatc 10657561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 27085789 - 27085864
Alignment:
Q  13 actggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||||||||||||||| |       ||||||||||||||||||| ||||||||||||||    
T  27085789 actggtttcttttgtttgttaatatatttgcata-tacaaaaatggttataattatattgtatatttaattatataa 27085864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 27938570 - 27938733
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatg 108  Q
    |||||||||||| ||||||||||||||||||||| |||||       ||||||||||||||||||||||| |||| |||||         ||    |||     
T  27938570 tatgactggtttattttgtttgttaatatatttgtatattaaaaaaatggttataattatattgtacattaaattttataa---------tttttttatt 27938660  T
Q  109 agcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    | ||||||  | ||||||| |||||| |||||| || |||| ||||||||||||||||||||||||| |||||    
T  27938661 aacgtatctcagccgtatcgtatcttgatttttaaaattttcccgtatcgacgtatcggtgcagtatcgtatc 27938733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 22738264 - 22738339
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattat 85  Q
    ||||||| ||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||    
T  22738264 tatgactagtttcttttgtttgttaatatatttgcatatt-aaaaaatagttataattatattgtacatttaattat 22738339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 9654161 - 9654242
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt-nnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||| ||||||||||||||||||||||||        | | ||||||||||||||||||||||||||||||    
T  9654161 tatgactggtttcttgtgtttgttaatatatttgcatattaaaagaaattgctataattatattgtacatttaattatataa 9654242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 30776898 - 30776838
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||| |||||    
T  30776898 ccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcggtatcgtatc 30776838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 32707242 - 32707182
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  32707242 ccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 32707182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 39796652 - 39796571
Alignment:
Q  8 atatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||| ||||||||| ||||||||||||||||||||||||       |  |||||||||||||||||||||||| ||||||    
T  39796652 atatgagtggtttcttgtgtttgttaatatatttgcatattaaaaaaattattataattatattgtacatttaatcatataa 39796571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 25750017 - 25750097
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| ||| ||||||||||||||||||||| |||||       ||||||||||||||||||||||| |||| |||||    
T  25750017 tatgactgatttattttgtttgttaatatatttgtatattaaaaaaatggttataattatattgtacattaaattttataa 25750097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 1795805 - 1795883
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||| |||||| |||       ||||||||||||||||||| ||||||||||||||    
T  1795805 tatgactggtttcttttgtttgttaatatgtttgca-att-aaaaaatggttataattatattgtatatttaattatataa 1795883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 3934494 - 3934456
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatat 47  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3934494 tatgactggtttcttttgtttgttaatatatttgcatat 3934456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 7977603 - 7977678
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||| |||||||||       |||||||||||||||  |||||||||||||||||    
T  7977603 ctggtttcttgtgtttgttaatatacttgcatattaaaaaattggttataattatataatacatttaattatataa 7977678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 17137779 - 17137733
Alignment:
Q  129 tatcttaatttttgaattttttccgtatcgacgtatcggtgcagtat 175  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  17137779 tatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtat 17137733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 41392320 - 41392250
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | ||||||| |||||| ||||||||| ||||||||||||| |||||| ||||||||| |||||    
T  41392320 cgtatcccagccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcagtgcagtatcgtatc 41392250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 1921295 - 1921363
Alignment:
Q  121 ccgtatcatatcttaatttttgaa--ttttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| |||||||||  ||||||||||||||||||||||||| ||||| |||||| ||||    
T  1921295 ccgtatcgtatcttgatttttgaaatttttttccgtatcgacgtatcggtgtagtatcgtatcttgtat 1921363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 26716779 - 26716844
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtatt 176  Q
    ||||||| | ||||||| ||| |||||||||||| ||||  |||||||||||||||||||||||||    
T  26716779 cgtatcccagccgtatcgtatattaatttttgaaattttctcgtatcgacgtatcggtgcagtatt 26716844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 26986519 - 26986584
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtatt 176  Q
    ||||||| | ||||||| ||| |||||||||||| ||||  |||||||||||||||||||||||||    
T  26986519 cgtatcccagccgtatcgtatattaatttttgaaattttctcgtatcgacgtatcggtgcagtatt 26986584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 30919102 - 30919176
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||  |||||||||       ||||||||||||||||||||||||||||||||||    
T  30919102 ctggtttcttgtgtttgttaatatccttgcatattaaaaaa-tggttataattatattgtacatttaattatataa 30919176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 32707327 - 32707266
Alignment:
Q  28 ttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||| |||||    
T  32707327 ttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattgtataa 32707266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 6242715 - 6242676
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  6242715 tatgactggtttcttgtgtttgttaatatatttgcatatt 6242676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 26692050 - 26692089
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  26692050 tatgactggtttattttgtttgttaatatatttgcatatt 26692089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 26961782 - 26961821
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  26961782 tatgactggtttattttgtttgttaatatatttgcatatt 26961821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 30777095 - 30777056
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  30777095 tatgactgatttcttttgtttgttaatatatttgcatatt 30777056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 3701500 - 3701578
Alignment:
Q  13 actggtttcttttgtttgttaatatatttgcatattnnnnnnn--tggttataattatattgtacatttaattatataa 89  Q
    |||| |||||| ||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||    
T  3701500 actgatttcttatgtttgttaatatatttgcatattaaaaaaaaatagttataattatattgtacatttaattatataa 3701578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 9728095 - 9728011
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnn----tggttataattatattgtacatttaattatataa 89  Q
    |||||||| |||||| ||||||||||||||||| ||||||           ||||||||||||||||||||||||||||||||||    
T  9728095 tatgactgatttcttgtgtttgttaatatatttccatattaaaaaaaaaaatggttataattatattgtacatttaattatataa 9728011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 35745998 - 35745932
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| ||||||||| ||||  |||||||||||||||||||||||  |||||| ||||    
T  35745998 ccgtatcgtatcttgatttttgaaattttctcgtatcgacgtatcggtgcagtaccgtatcttgtat 35745932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 43357364 - 43357298
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| ||||||| | |||| || |||||||||||| ||||||||| |||||||||||    
T  43357364 ccgtatcgtatcttgatttttgtaattttcccatatcgacgtatcagtgcagtatcgtatctcgtat 43357298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 9793250 - 9793409
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| ||||||| |       ||||||||||||||| ||||||||||||||||||         ||    ||| | |||    
T  9793250 ctggtttcttgtgtttgttaatatacttgcataataaaaaaatggttataattatatagtacatttaattatataat--------tttttttattaacgt 9793341  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||  | ||||||  |||||| ||||||||| |||| |||||||||| |||||||||||||| |||||    
T  9793342 atcacagccgtattgtatcttgatttttgaaattttgccgtatcgacatatcggtgcagtatcgtatc 9793409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 30776955 - 30776922
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||    
T  30776955 tggttataattatattgtacatttaattatataa 30776922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 7977704 - 7977764
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| ||||||  ||||| |||||||||||||||| |||||    
T  7977704 ccgtatcgtatcttgatttttgaaatttttctctatcggcgtatcggtgcagtatcgtatc 7977764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 25750120 - 25750180
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| |||| | |||||||||||||| |||||||| |||||    
T  25750120 ccgtatcgtatcttgatttttgaaattttcctgtatcgacgtatcgatgcagtatcgtatc 25750180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 26716684 - 26716767
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttata---attatattgtacatttaattatataa 89  Q
    |||||||||||| ||||||||||||||||||||| |||||       ||||||||   ||||||||||||||| |||| |||||    
T  26716684 tatgactggtttattttgtttgttaatatatttgtatattaaaaaaatggttataattattatattgtacattaaattttataa 26716767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 26986424 - 26986507
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttata---attatattgtacatttaattatataa 89  Q
    |||||||||||| ||||||||||||||||||||| |||||       ||||||||   ||||||||||||||| |||| |||||    
T  26986424 tatgactggtttattttgtttgttaatatatttgtatattaaaaaaatggttataattattatattgtacattaaattttataa 26986507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 5985627 - 5985564
Alignment:
Q  25 tgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||    
T  5985627 tgtttgttaatatatttgcatattaaaaaaa-ggttataattatattatacatttaattatataa 5985564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 5722534 - 5722600
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| |||||||||    || ||||||||| |||||||||||||| |||||||||||    
T  5722534 ccgtatcgtatcttgatttttgaaaaaatttcgtatcgacatatcggtgcagtatcgtatctcgtat 5722600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 5985540 - 5985474
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| |||||| || |||| |||||||| |||||| ||| ||||| |||||||||||    
T  5985540 ccgtatcgtatcttgatttttaaaattttcccgtatcggcgtatcagtgtagtatcgtatctcgtat 5985474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 12190934 - 12191000
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| | |||| || |||||||||||| |||||||| ||| ||||||||||| ||||    
T  12190934 ccgtatcgtatcttgaattttaaaatttttccgtatcaacgtatcgatgccgtattgtatcttgtat 12191000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 26794065 - 26793995
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | ||||||| |||||| |||||| || ||||||||||| ||||||||| || ||||| |||||    
T  26794065 cgtatcccagccgtatcgtatcttgatttttaaaatttttccgtattgacgtatcgatgtagtatcgtatc 26793995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 26794162 - 26794099
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacat 77  Q
    |||||||||| |||||||||||||  |||||||||       ||||||||||||||||||||||    
T  26794162 ctggtttcttgtgtttgttaatatcgttgcatattaaaaaaatggttataattatattgtacat 26794099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 14836781 - 14836814
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||| ||||||    
T  14836781 tggttataattatattgtacatttaataatataa 14836814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 11907822 - 11907881
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||  ||||||| |||||||| ||||||||||||||||||||  |||||||| |||||    
T  11907822 ccgtattgtatctta-tttttgaaatttttccgtatcgacgtatcaatgcagtatcgtatc 11907881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 21252002 - 21252058
Alignment:
Q  124 tatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtat 180  Q
    |||| |||||| ||||||||| |||||| |||| ||| |||||||||||||| ||||    
T  21252002 tatcgtatcttgatttttgaaatttttctgtattgacatatcggtgcagtatcgtat 21252058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 8e-26; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 45532224 - 45532058
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||         ||    ||| | |||    
T  45532224 ctggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa-------tttttttttattaacgt 45532132  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    || | | ||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  45532131 attccagccgtatcgtatctttatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatctcgtat 45532058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 19421845 - 19421925
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||    
T  19421845 tatgactggtttcttttgtttgttaatatatttgcatattaaaaaaatggttataattatattgtatatttaattatataa 19421925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 41741852 - 41741772
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||||||| |||||||||    
T  41741852 tatgactggtttcttttgtttgttaatatattcgcatattaaaaaaatggttataattatattgtacattttattatataa 41741772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 45347985 - 45348065
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| |||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||    
T  45347985 tatgactgatttcttttgtttgttaatatgtttgcatattaaaaaaatggttataattatattgtacatttaattatataa 45348065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 22610438 - 22610363
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  22610438 ctggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 22610363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 212927 - 213007
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||  ||||||||||||||||||||||||| |||||       ||||||||||||||||||||||||||||||||||    
T  212927 tatgactaatttcttttgtttgttaatatatttgtatattaaaaaaatggttataattatattgtacatttaattatataa 213007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 25936151 - 25936080
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatct 182  Q
    ||||||| ||||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  25936151 cgtatcccaaccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatct 25936080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 30787267 - 30787195
Alignment:
Q  16 ggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  30787267 ggtttcttttgtttgttaatatatttgcatattaaaaaa-tggttataattatattgtacatttaattatataa 30787195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 39664829 - 39664992
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatg 108  Q
    |||| ||| |||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||         ||    |||     
T  39664829 tatgcctgatttcttttgtttgttaatatgtttgcatattaaaaaaatggttataattatattgtacatttaattatataa---------tttttttatt 39664919  T
Q  109 agcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    | ||||||| | ||||||| |||||| ||||||||| |||| ||||||||||||||| || |||||| |||||    
T  39664920 aacgtatcccagccgtatcgtatcttgatttttgaaattttcccgtatcgacgtatcagtacagtatcgtatc 39664992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 1529066 - 1529136
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||    
T  1529066 cgtatcccagccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 1529136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 20509812 - 20509729
Alignment:
Q  6 agatatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||| ||||||| |||||||||||||||||||||| |||||       ||||||||||||||||||| ||||||||||||||    
T  20509812 agatataactggttacttttgtttgttaatatatttgtatattaaaaaaatggttataattatattgtatatttaattatataa 20509729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 28705694 - 28705852
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| ||||||| |       ||||||||||||||| ||||||||||||||||||         ||    ||| | |||    
T  28705694 ctggtttcttgtgtttgttaatatacttgcataataaaaaaatggttataattatatagtacatttaattatataa---------tttttttattaacgt 28705784  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||| | |||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||| |||||    
T  28705785 atcctagccgtatcatatcttgatttttgaaattttgccgcatcgacgtatcggtgcagtatcgtatc 28705852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 1678845 - 1678686
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| ||||||| |       ||||||||||||||| ||||||||||||||||||         ||    ||| | |||    
T  1678845 ctggtttcttgtgtttgttaatatacttgcataataaaaaaatggttataattatatagtacatttaattatataat--------tttttttattaacgt 1678754  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||| | ||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||    
T  1678753 atcccagccgtatcgtatcttgatttttgaaattttaccgtatcgacgtatcggtgcagtatcgtatc 1678686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 22289429 - 22289351
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatata 88  Q
    ||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||    
T  22289429 tatgaatggtttcttttgtttgttaatatatttgcatatt-aaaaaatggttataattatattatacatttaattatata 22289351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 21157446 - 21157365
Alignment:
Q  8 atatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||  |||||||||||||||||||||       ||  ||||||||||||||||||||||||||||||    
T  21157446 atatgactggtttcttttacttgttaatatatttgcatattaaaaaaatgaatataattatattgtacatttaattatataa 21157365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 52684958 - 52685018
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||    
T  52684958 ccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 52685018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 53192941 - 53193017
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| | ||||||| |||||| ||||||||||||||| ||||||| || ||||||||||||| |||||||||||    
T  53192941 cgtatcccagccgtatcgtatcttgatttttgaatttttttcgtatcggcgaatcggtgcagtatcgtatctcgtat 53193017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 983603 - 983683
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||  |||||||||||||||| | ||||||||||||       ||||||||||||||||||||||||||||||||||    
T  983603 tatgactaatttcttttgtttgttagtgtatttgcatatttattaaatggttataattatattgtacatttaattatataa 983683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 29916204 - 29916283
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||||| ||       || ||||| |||||||||||||||||||||||||    
T  29916204 tatgactggtttcttttgtttgttaatatatttgcat-tttaaaaaatgattatacttatattgtacatttaattatataa 29916283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 29965357 - 29965436
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||||| ||       || ||||| |||||||||||||||||||||||||    
T  29965357 tatgactggtttcttttgtttgttaatatatttgcat-tttaaaaaatgattatacttatattgtacatttaattatataa 29965436  T

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Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 7328271 - 7328329
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||    
T  7328271 gtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 7328329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 28882238 - 28882082
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgtatc 116  Q
    ||||||| ||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||         ||    ||| | ||||||    
T  28882238 gtttcttgtgtttgttaatatatttgcatattaaaaaaagggttataattatattatacatttaattatataacttt-----tt----tattaacgtatc 28882148  T
Q  117 caaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatct 182  Q
    | | ||||||| |||||| ||||||||| |||| ||||||| ||||||||||||||||| ||||||    
T  28882147 ccagccgtatcgtatcttcatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatct 28882082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 52501322 - 52501260
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctc 183  Q
    ||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  52501322 ccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatctc 52501260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 52504984 - 52504909
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||| |||||||||       |||||| |||||||||||||||||||||||||||    
T  52504984 ctggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttacaattatattgtacatttaattatataa 52504909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 25322196 - 25322122
Alignment:
Q  15 tggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||| ||||||||||||||||||||||||       | |||||||||||||| |||||||||||||||||    
T  25322196 tggtttcttgtgtttgttaatatatttgcatattaaaaaaattgttataattatattatacatttaattatataa 25322122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 45056983 - 45056905
Alignment:
Q  12 gactggtttcttttgtttgttaatatatttgcatatt-nnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||||||||||||||||||        |||||||||| ||||| |||||||||||||||||    
T  45056983 gactggtttcttttgtttgttaatatatttgcatattaaaaaaaatggttataatcatattttacatttaattatataa 45056905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 13748201 - 13748125
Alignment:
Q  13 actggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaa 90  Q
    |||||||| |||||||||||||||| ||||||||||       ||||||||||||||||||||| |||||||||||||    
T  13748201 actggtttattttgtttgttaatatgtttgcatattaaaaaaatggttataattatattgtaca-ttaattatataaa 13748125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 22289298 - 22289238
Alignment:
Q  122 cgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatct 182  Q
    |||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  22289298 cgtatcgtatcttgatttttgaaattttcccgtatcgacgtatcggtgcagtatcgtatct 22289238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 33241379 - 33241455
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| | ||||||| |||||| ||||||||| |||| ||||||  ||||||||||||||||| |||||||||||    
T  33241379 cgtatcccagccgtatcgtatcttgatttttgaaattttcccgtattaacgtatcggtgcagtatcgtatctcgtat 33241455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 48333458 - 48333522
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    |||||||||||| ||||||||| ||| |||| ||||||||||||||||||||| |||||| ||||    
T  48333458 gtatcatatcttgatttttgaaatttatccgcatcgacgtatcggtgcagtatcgtatcttgtat 48333522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 28548457 - 28548531
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattat 85  Q
    ||||||| ||||||| |||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  28548457 tatgactagtttcttatgtttgttaatatatttgcatat--aaaaaatggttataattatattgtacatttaattat 28548531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 48123785 - 48123857
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||| |||||||||||||| |||||||||       ||||||||||||||||||| ||||||||||||||    
T  48123785 gtttcttgtgtttgttaatatacttgcatattgaaaaaatggttataattatattgtatatttaattatataa 48123857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 25701196 - 25701275
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| |||||||||||||||||||||||| ||||||       |||||||||||||||||||||||| || ||||||    
T  25701196 tatgactgatttcttttgtttgttaatatatttacatatt-aaaaaatggttataattatattgtacatttgatgatataa 25701275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 40499429 - 40499499
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | ||||||| |||||| ||||||||| |||||||||||| || |||||||||||||| |||||    
T  40499429 cgtatcccagccgtatcgtatcttgatttttgaaatttttccgtatcaacatatcggtgcagtatcgtatc 40499499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 19349306 - 19349226
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataa 89  Q
    ||||||| |||||||||||| |||||||| ||||||||||        ||||||||||||||||||||||||||||||||||    
T  19349306 tatgactagtttcttttgtt-gttaatatgtttgcatattaaaaaaaatggttataattatattgtacatttaattatataa 19349226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 21005860 - 21005796
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtat 175  Q
    ||||||| | ||||||| |||||| ||||||||| ||||| | ||||||||||||||||||||||    
T  21005860 cgtatcccagccgtatcctatcttgatttttgaaattttttcatatcgacgtatcggtgcagtat 21005796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 42230411 - 42230471
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| ||||  |||||||||||||||||||||||| |||||    
T  42230411 ccgtatcgtatcttgatttttgaaattttctcgtatcgacgtatcggtgcagtatcgtatc 42230471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 19878788 - 19878749
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  19878788 tatgactggtttcttttgtttattaatatatttgcatatt 19878749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 42464301 - 42464225
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||  |||||||||        ||||||||||||||||||||||||||||||||||    
T  42464301 ctggtttcttgtgtttgttaatatccttgcatattaaaaaaaatggttataattatattgtacatttaattatataa 42464225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 52684760 - 52684799
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  52684760 tatgactggtttcttgtgtttgttaatatatttgcatatt 52684799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 2123128 - 2123204
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnn----tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||| ||||||||||           ||||||||||||||||||||||||||||||||||    
T  2123128 gtttcttttgtttgttaatatttttgcatattaaaagaaaaaatggttataattatattgtacatttaattatataa 2123204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 25936238 - 25936166
Alignment:
Q  15 tggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||| ||||||||||||||||||||||||       |||||||||||||||| ||||  |||||||||||    
T  25936238 tggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattataca--taattatataa 25936166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 29916306 - 29916372
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| ||||||||| |||| || ||||  |||||||||||||||| |||||||||||    
T  29916306 ccgtatcgtatcttgatttttgaaattttcccatatcatcgtatcggtgcagtatcgtatctcgtat 29916372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 29965459 - 29965525
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| ||||||||| |||| || ||||  |||||||||||||||| |||||||||||    
T  29965459 ccgtatcgtatcttgatttttgaaattttcccatatcatcgtatcggtgcagtatcgtatctcgtat 29965525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 37996374 - 37996304
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | || |||| |||||| ||||||||| ||||||| |||| ||||||||||||||||| |||||    
T  37996374 cgtatcccagccatatcgtatcttgatttttgaaatttttccatatcaacgtatcggtgcagtatcgtatc 37996304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 38888781 - 38888702
Alignment:
Q  10 atgactggtttcttttgtttgttaatatatttgcatatt-nnnnnnntggttataattatattgtacatttaattatata 88  Q
    ||||||| |||||||||||||||||| ||||||||||||        ||||||||||||||||  |||||||||||||||    
T  38888781 atgactgatttcttttgtttgttaatgtatttgcatattaaaaaaaatggttataattatatttgacatttaattatata 38888702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 45348089 - 45348155
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| ||| || ||||||||| |||| ||||||||||||||| || |||||| |||||||||||    
T  45348089 ccgtatcgtattttgatttttgaaattttcccgtatcgacgtatcagtacagtatcgtatctcgtat 45348155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 50286897 - 50286762
Alignment:
Q  25 tgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgtatccaaaccgt 124  Q
    ||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||         |||   ||| | ||||||||  ||||    
T  50286897 tgtttgttaatatatttgcatattaaaaaaaaggttataattatattatacatttaattatataat--------ttattttattaacgtatccag-ccgt 50286807  T
Q  125 atcatatcttaatttttgaattttttccgtatcgacgtatcggtg 169  Q
    ||| ||||||||||||||||||||| ||||||| |||||| ||||    
T  50286806 atcgtatcttaatttttgaatttttcccgtatcaacgtattggtg 50286762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 19421939 - 19422008
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtat 180  Q
    ||||||| | ||| ||| |||||| ||||||||| ||||||| |||||||||||| ||||||||| ||||    
T  19421939 cgtatcctagccgcatcgtatcttgatttttgaaatttttccatatcgacgtatcagtgcagtatcgtat 19422008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 21006046 - 21006009
Alignment:
Q  11 tgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  21006046 tgactggtttcttgtgtttgttaatatatttgcatatt 21006009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 13352871 - 13352807
Alignment:
Q  23 tttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||| |||||       ||||||||||||||||||||||||| ||||||||    
T  13352871 tttgtttgttaatatatttgtatattaaaaa--tggttataattatattgtacatttacttatataa 13352807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 22610340 - 22610280
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| |||||||||  ||||| |||||| |||||||||||||||| |||||    
T  22610340 ccgtatcgtatcttgatttttgaaaattttctgtatcggcgtatcggtgcagtatcgtatc 22610280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 35390390 - 35390454
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtat 175  Q
    ||||||| | ||||||| ||||||||||||| || |||| || |||| |||||||||||||||||    
T  35390390 cgtatcccagccgtatcgtatcttaatttttaaaattttcccatatcaacgtatcggtgcagtat 35390454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 48334403 - 48334467
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||| |||||| ||||||||| ||| || |||||||||||||||| |||||| |||||| ||||    
T  48334403 gtatcgtatcttgatttttgaaatttatctgtatcgacgtatcggtacagtatcgtatcttgtat 48334467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 10224223 - 10224153
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | ||||||| |||||| |||||| || ||||||||||| ||||||||| || ||||| |||||    
T  10224223 cgtatcccagccgtatcgtatcttgatttttaaaatttttccgtattgacgtatcgatgtagtatcgtatc 10224153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 10224320 - 10224257
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacat 77  Q
    |||||||||| |||||||||||||  |||||||||       ||||||||||||||||||||||    
T  10224320 ctggtttcttgtgtttgttaatatcgttgcatattaaaaaaatggttataattatattgtacat 10224257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 19349202 - 19349136
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| ||||||||| |||| |||| ||||| |||| ||| ||||| |||||||||||    
T  19349202 ccgtatcgtatcttgatttttgaaattttaccgtgtcgacatatcagtgtagtatcgtatctcgtat 19349136  T

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Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 213032 - 213073
Alignment:
Q  122 cgtatcatatcttaatttttgaattttttccgtatcgacgta 163  Q
    |||||||||| || ||||||||| ||||||||||||||||||    
T  213032 cgtatcatatattgatttttgaaatttttccgtatcgacgta 213073  T

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Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 2566820 - 2566787
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||| ||||||||    
T  2566820 tggttataattatattgtacatttagttatataa 2566787  T

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Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 48123883 - 48123920
Alignment:
Q  122 cgtatcatatcttaatttttgaattttttccgtatcga 159  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  48123883 cgtatcatatcttgatttttgaaatttttccgtatcga 48123920  T

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Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 52684902 - 52684935
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||| ||||||||||||||    
T  52684902 tggttataattatattgtatatttaattatataa 52684935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 19877874 - 19877846
Alignment:
Q  59 ttataattatattgtacatttaattatat 87  Q
    |||||||||||||||||||||||||||||    
T  19877874 ttataattatattgtacatttaattatat 19877846  T

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Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 89
Target Start/End: Complemental strand, 21005900 - 21005872
Alignment:
Q  61 ataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||||||||||    
T  21005900 ataattatattgtacatttaattatataa 21005872  T

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Target: chr2 (Bit Score: 60; Significance: 8e-26; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 4169679 - 4169517
Alignment:
Q  18 tttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgtatcc 117  Q
    |||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||         ||    ||| | ||||||     
T  4169679 tttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataatt-------tttttttattaacgtatct 4169587  T
Q  118 aaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
     | ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  4169586 cagccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatctcgtat 4169517  T

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Target: chr2; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 35996942 - 35997022
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  35996942 tatgactggtttcttttgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 35997022  T

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Target: chr2; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 2319707 - 2319876
Alignment:
Q  11 tgactggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataaannnnnnnattagcgtatga 109  Q
    ||||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||| |||||||||         ||    ||| |    
T  2319707 tgactggtttcttttatttgttaatatatttgcatattaaaaaaaatggttataattatattgtacattttattatataat--------tttttttatta 2319798  T
Q  110 gcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
     ||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||  |||||||| |||||||||||    
T  2319799 acgtatcctaaccgtatcatatcttgatttttgaaattttttcgtatcgacgtatcaatgcagtatcgtatctcgtat 2319876  T

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Target: chr2; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 40431723 - 40431559
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatg 108  Q
    ||||||||  |||||||||||| |||||||||||||||||       |||||||||||||||||| |||||||||||||||        |||    |||     
T  40431723 tatgactgacttcttttgtttgctaatatatttgcatattaaaaaaatggttataattatattgttcatttaattatataa----ttttatt----tatt 40431632  T
Q  109 agcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    | ||||||| | ||||||| |||||| |||||| || ||||||||||||||||||||||||||||||| ||||    
T  40431631 aacgtatcccagccgtatcgtatcttgatttttaaaatttttccgtatcgacgtatcggtgcagtattatatc 40431559  T

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Target: chr2; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 44157008 - 44157088
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||| |||||||||||||||||    
T  44157008 tatgactggtttcttttgtttgttaatatatttgcatattaaaaaaatggtcataattatattatacatttaattatataa 44157088  T

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Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 6496834 - 6496759
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  6496834 ctggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 6496759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 8482619 - 8482540
Alignment:
Q  10 atgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||| |||||||||||    
T  8482619 atgactgatttcttttgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatataattatataa 8482540  T

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Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 28746367 - 28746288
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatata 88  Q
    |||||||| |||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||||||    
T  28746367 tatgactgatttcttttgtttgttaatatgtttgcatattaaaaaaatggttataattatattgtacatttaattatata 28746288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 14216942 - 14216861
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt-nnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||| |||||||||    
T  14216942 tatgactggtttcttttgtttgttaatatatttgcatattaaaaaaaatggttataattatattgtacattttattatataa 14216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 18301591 - 18301667
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||||| ||||||| |||||| ||||||||| |||| |||||||||| |||||||||||||| |||||||||||    
T  18301591 cgtatccaagccgtatcgtatcttgatttttgaaattttcccgtatcgacatatcggtgcagtatcgtatctcgtat 18301667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 3564250 - 3564330
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||||||||||||||  |||||       |||||||||||||| |||||||||||||||||||    
T  3564250 tatgactggtttcttttgtttgttaatatatttaaatattaaaaaaatggttataattatactgtacatttaattatataa 3564330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 20537284 - 20537359
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| ||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||    
T  20537284 ctggtttcttgtgtttgttaatatatttgcatattaaaaaaatggtcataattatattgtacatttaattatataa 20537359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 15 - 173
Target Start/End: Original strand, 7877080 - 7877230
Alignment:
Q  15 tggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgta 114  Q
    ||||||||| |||||||||||||| |||||||||       ||||||||||||||| ||||||||||||||||||         ||    ||| | ||||    
T  7877080 tggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttataattatatagtacatttaattatataa--------ttttttttattaacgta 7877171  T
Q  115 tccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagt 173  Q
    ||| | ||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||    
T  7877172 tcccagccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagt 7877230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 12206689 - 12206741
Alignment:
Q  129 tatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  12206689 tatcttaatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 12206741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 22571453 - 22571529
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| | ||||||| |||||| ||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  22571453 cgtatcccagccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcagtgcagtatcgtatctcgtat 22571529  T

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Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 1005923 - 1006003
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||| ||||||||||||||||||||| |||||       ||||||||||||||||||||||| |||| |||||    
T  1005923 tatgactggtttattttgtttgttaatatatttgtatattaaaaaaatggttataattatattgtacattaaattttataa 1006003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 5588449 - 5588529
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||| || |||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||| |||||||    
T  5588449 tatgattgatttcttttgtttgttaatatatttgcatattaaaaaaatggctataattatattgtacatttaactatataa 5588529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 10573916 - 10573988
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||       | ||||||||||||||| ||||||||    
T  10573916 tatgactggtttcttttgtttgttaatatatttgcatattaaaaaaattgttataattatattggacatttaa 10573988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 6125129 - 6125204
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||| |||||||||       ||||||||||||||||||| ||||||||||||||    
T  6125129 ctggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttataattatattgtaaatttaattatataa 6125204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 16562174 - 16562249
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||| |||||||||       ||||||||||||||| ||||||||||||||||||    
T  16562174 ctggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttataattatatagtacatttaattatataa 16562249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 40536628 - 40536706
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatat 87  Q
    ||||| ||||||||| ||||||||||||||||||||||||       | |||||||||||||| |||||||||||||||    
T  40536628 tatgattggtttcttgtgtttgttaatatatttgcatattaaaaaaattgttataattatattctacatttaattatat 40536706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 34146621 - 34146694
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaa 90  Q
    |||||||||||||||||||| |||||||||||       | ||||||||||||||| |||||||||||||||||    
T  34146621 gtttcttttgtttgttaatacatttgcatattaaaaaattagttataattatattgcacatttaattatataaa 34146694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 5371521 - 5371676
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgtatc 116  Q
    ||||||| |||||||||||||||||||| |||        ||||||||||||||| |||||||||||||||||         ||    ||| | ||||||    
T  5371521 gtttcttgtgtttgttaatatatttgcaaattaaaaaaaaggttataattatattatacatttaattatataa---------tttttttattaacgtatc 5371611  T
Q  117 caaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    | | ||||||| |||||| ||||||||| |||| |||||||| |||||||||||||||| |||||    
T  5371612 ccagccgtatcgtatcttgatttttgaaattttcccgtatcggcgtatcggtgcagtatcgtatc 5371676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 4562294 - 4562364
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | ||||||| |||||| ||||||||| ||||||| |||||||||||||||| ||||| |||||    
T  4562294 cgtatcccagccgtatcgtatcttgatttttgaaatttttccatatcgacgtatcggtgtagtatcgtatc 4562364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 6496733 - 6496675
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  6496733 gtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 6496675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 40307998 - 40307923
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||  |||||||||       | ||||||||||||||||||||||||||||||||    
T  40307998 ctggtttcttgtgtttgttaatatccttgcatattaaaaaaatagttataattatattgtacatttaattatataa 40307923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 44157111 - 44157165
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtat 175  Q
    ||||||| |||||| ||||||||| |||||| |||||||||||||||||||||||    
T  44157111 ccgtatcgtatcttgatttttgaaatttttctgtatcgacgtatcggtgcagtat 44157165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 3564359 - 3564424
Alignment:
Q  122 cgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    |||||| |||||| ||||||||| ||||  |||||| ||||||||||||||||| |||||||||||    
T  3564359 cgtatcgtatcttgatttttgaaattttctcgtatcaacgtatcggtgcagtatcgtatctcgtat 3564424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 14824550 - 14824616
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtac 75  Q
    |||||||||||| ||||||||||||||||||||| |||||       ||||||||||||||||||||    
T  14824550 tatgactggtttattttgtttgttaatatatttgtatattaaaaaaatggttataattatattgtac 14824616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 35342851 - 35342904
Alignment:
Q  119 aaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcag 172  Q
    ||||||||| |||||| ||||||||| ||||||||||||| |||||||||||||    
T  35342851 aaccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcag 35342904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 1006026 - 1006093
Alignment:
Q  121 ccgtatcatatctta-atttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||||||||||  ||||||||| ||||  |||||| ||||||||||||||||| |||||||||||    
T  1006026 ccgtatcatatctttgatttttgaaattttcacgtatcaacgtatcggtgcagtatcgtatctcgtat 1006093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 12206416 - 12206484
Alignment:
Q  22 ttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaa 90  Q
    |||| ||||||||||||||||||||||       ||||||||||||||||| |||||||| ||||||||    
T  12206416 ttttttttgttaatatatttgcatattaaaaaaatggttataattatattgcacatttaaatatataaa 12206484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 16562276 - 16562339
Alignment:
Q  124 tatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    |||| |||||| ||||||||| ||||||||||| | |||||||||||||||| |||||| ||||    
T  16562276 tatcgtatcttgatttttgaaatttttccgtattggcgtatcggtgcagtatcgtatctagtat 16562339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 12819860 - 12819913
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagta 174  Q
    ||||||| |||||| ||||||||| |||| ||||||| ||||||||||||||||    
T  12819860 ccgtatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagta 12819913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 4562200 - 4562281
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatattt-gcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||| |||||||||||| ||||||| | |||||       ||||||||||||||||||||||| |||| |||||    
T  4562200 tatgactggtttattttgtttgttagtatattttgtatattaaaaaactggttataattatattgtacattaaattttataa 4562281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 10574018 - 10574070
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtat 175  Q
    |||||||||||| ||||||||| |||| |||||||  ||||||||||||||||    
T  10574018 gtatcatatcttgatttttgaaattttcccgtatcagcgtatcggtgcagtat 10574070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 24586040 - 24586116
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| ||| ||||| |||||  ||||||||| ||||||||||||  | ||||||||||||||  ||||||||||    
T  24586040 cgtatcccaacagtatcgtatctcgatttttgaaatttttccgtatcagcatatcggtgcagtatcatatctcgtat 24586116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 4356303 - 4356359
Alignment:
Q  32 taatatatttgcatattnnnnnnntggttataattatattgtacatttaattatata 88  Q
    |||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  4356303 taatatatttgcatatttaaaaaatagttataattatattgtacatttaattatata 4356359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 31235871 - 31235832
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  31235871 tatgactagtttcttttgtttgttaatatatttgtatatt 31235832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 24585946 - 24586028
Alignment:
Q  8 atatgactggtttcttttgtttgttaatatat--ttgcatattnnnnnnn-tggttataattatattgtacatttaattatat 87  Q
    |||||||| ||||||||||||||||| |||||  |||||||||        | ||||||||||||||||||||||||||||||    
T  24585946 atatgacttgtttcttttgtttgttattatatacttgcatattaaaaaaaatagttataattatattgtacatttaattatat 24586028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 31235770 - 31235733
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcg 158  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  31235770 ccgtatcatatcttgatttttgaaatttttccgtatcg 31235733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 37354563 - 37354502
Alignment:
Q  120 accgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||||||| |||||| | |||| || |||| ||||||| ||||||||||||||||| |||||    
T  37354563 accgtatcgtatcttgaattttaaagttttcccgtatcaacgtatcggtgcagtatcgtatc 37354502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 21104997 - 21105045
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcga 159  Q
    |||||||||| |||||||||||||||||||| || ||||| | ||||||    
T  21104997 cgtatccaaatcgtatcatatcttaatttttaaaattttttcatatcga 21105045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 1e-24; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 6707694 - 6707612
Alignment:
Q  6 agatatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatata 88  Q
    ||||||| |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  6707694 agatatgtctggtttcttttgtttgttaatatatttgcatattgaaaaaatggttataattatattgtacatttaattatata 6707612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 7255351 - 7255431
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  7255351 tatgactgatttcttttgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 7255431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 22988828 - 22988749
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatata 88  Q
    ||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  22988828 tatgactggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatata 22988749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 23799568 - 23799647
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatata 88  Q
    ||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  23799568 tatgactggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatata 23799647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 13607357 - 13607293
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  13607357 gtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatctcgtat 13607293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 19128565 - 19128645
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||| | |||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||    
T  19128565 tatgaccgatttcttttgtttgttaatatgtttgcatattaaaaaaatggttataattatattgtacatttaattatataa 19128645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 8357837 - 8357912
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| ||||||||||||||||||| ||||       ||||||||||||||||||||||||||||||||||    
T  8357837 ctggtttcttgtgtttgttaatatatttgcctattaaaaaaatggttataattatattgtacatttaattatataa 8357912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 3213201 - 3213265
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||| |||| |||||||||||    
T  3213201 gtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcggtatcgtatctcgtat 3213265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 234726 - 234806
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||| ||||||||||||||||||||| |||| |||||       |||||||||||||| |||||||||||||||||||    
T  234726 tatgactagtttcttttgtttgttaatatgtttgtatattaaaaaaatggttataattatactgtacatttaattatataa 234806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 3299470 - 3299550
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||| |||||| || ||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||    
T  3299470 tatgattggtttattgtgtttgttaatatatttgcatgttaaaaaaatggttataattatattgtacatttaattatataa 3299550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 27084385 - 27084464
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||| ||||||||||||||||||||||||||| |||||||       |||||||||||||||| |||||||||||||||||    
T  27084385 tatggctggtttcttttgtttgttaatatatt-gcatattaaaaaaatggttataattatattatacatttaattatataa 27084464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 1035977 - 1035819
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| ||||||| |       ||||||||||||||| ||||||||||||||||||         ||    ||| | |||    
T  1035977 ctggtttcttgtgtttgttaatatacttgcataataaaaaaatggttataattatatagtacatttaattatataa---------tttttttattaacgt 1035887  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||  | ||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||    
T  1035886 atctcagccgtatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatc 1035819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 26327753 - 26327835
Alignment:
Q  8 atatgactggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||| |||||||  ||||||||        ||||||||||||||||||||||||||||||||||    
T  26327753 atatgactggtttcttttgtttgctaatatacctgcatattaaaaaaaatggttataattatattgtacatttaattatataa 26327835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 13045059 - 13044986
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatatt-nnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||| ||||||    
T  13045059 gtttcttttgtttgttaatatatttgcatattgaaaaaaatggttataattatattgtacatttaatgatataa 13044986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 31187017 - 31186957
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  31187017 ccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 31186957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 4153247 - 4153168
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| ||||||||||||||||||||||||||||| |       | ||||||||||||||||||||| ||||||||||    
T  4153247 tatgactgatttcttttgtttgttaatatatttgcata-tgaaaaaattgttataattatattgtacattcaattatataa 4153168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 31738327 - 31738255
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||| ||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||    
T  31738327 gtttcttgtgtttgttaatatatttgcatattaaaaaaaaggttataattatattatacatttaattatataa 31738255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 13607462 - 13607424
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatat 47  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13607462 tatgactggtttcttttgtttgttaatatatttgcatat 13607424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 7187939 - 7187865
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||| ||| |||||||||       ||||||||||||||||||||||||||||||||||    
T  7187939 ctggtttcttgtgtttgttaaaatacttgcatattaaaaaa-tggttataattatattgtacatttaattatataa 7187865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 13061052 - 13060979
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||| ||||||||||||||||||        |||||||||| |||||||||||||||||||||||    
T  13061052 gtttcttttgtttattaatatatttgcatattgaaaaaactggttataatcatattgtacatttaattatataa 13060979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 7255455 - 7255513
Alignment:
Q  122 cgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtat 180  Q
    |||||| ||| |||||||||||| |||||| |||| |||||||||||||||||| ||||    
T  7255455 cgtatcgtattttaatttttgaaatttttctgtatagacgtatcggtgcagtatcgtat 7255513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 13060948 - 13060890
Alignment:
Q  129 tatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    |||||| ||||| ||| ||||||| ||||||||||||||||||||||  ||||||||||    
T  13060948 tatcttgattttcgaaatttttccatatcgacgtatcggtgcagtatcatatctcgtat 13060890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 3213142 - 3213175
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||    
T  3213142 tggttataattatattgtacatttaattatataa 3213175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 11105723 - 11105800
Alignment:
Q  12 gactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaa 90  Q
    ||||||||||| |||||||||||||||||| ||||||       ||| |||||||||||||||||||||  ||||||||    
T  11105723 gactggtttctgttgtttgttaatatattttcatattaaaaaaatgg-tataattatattgtacatttatatatataaa 11105800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 3213002 - 3213041
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  3213002 tatgactgatttattttgtttgttaatatatttgcatatt 3213041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 32018529 - 32018568
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  32018529 tatgactgatttcttgtgtttgttaatatatttgcatatt 32018568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 32018700 - 32018770
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | ||||||| ||| || ||||||||| |||||||||||| |||||| |||||| ||| |||||    
T  32018700 cgtatcccagccgtatcgtattttgatttttgaaatttttccgtatctacgtattggtgcattatcgtatc 32018770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 32130122 - 32130056
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| ||||||||| |||| |  |||| ||||||||||| ||||| |||||||||||    
T  32130122 ccgtatcgtatcttgatttttgaaattttccgatatcaacgtatcggtgtagtatcgtatctcgtat 32130056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 9782055 - 9782135
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||    
T  9782055 tatgactggtttcttttgtttgttaatatgtttgcatattaaaaaaatggttataattatattgtacatttaattatataa 9782135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 29862211 - 29862291
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||    
T  29862211 tatgactggtttcttttgtttgttaatatgtttgcatattaaaaaaatggttataattatattgtacatttaattatataa 29862291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 33040790 - 33040947
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatg 108  Q
    ||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||        ||    |||     
T  33040790 tatgactcgtttcttttgtttgttaatatatttgcatattaaaaat-tggttataattatattgtacatttaattatataaa--------tttttttatt 33040880  T
Q  109 agcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtat 175  Q
    | ||||||| | ||||||| |||||||||||||||| |||||||| || ||||||||||| ||||||    
T  33040881 aacgtatcccagccgtatcgtatcttaatttttgaaatttttccgcatagacgtatcggttcagtat 33040947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 28948369 - 28948209
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||         ||    ||| | |||    
T  28948369 ctggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttataattatattgtacatttaattatataa-------tttttttttattaacgt 28948277  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||  | ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||    
T  28948276 atctcagccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 28948209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 9528552 - 9528471
Alignment:
Q  8 atatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| ||||||||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  9528552 atatgactagtttcttttgtttattaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 9528471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 30324665 - 30324820
Alignment:
Q  15 tggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgta 114  Q
    ||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||           ||    ||| | ||||    
T  30324665 tggtttcttgtgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatat-----------tttttttattaacgta 30324753  T
Q  115 tccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||| | ||||||| |||||||||||||||| |||||||||||| |||||||| |||||||| |||||    
T  30324754 tcccagccgtatcgtatcttaatttttgaaatttttccgtatcaacgtatcgatgcagtatcgtatc 30324820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 10764051 - 10764126
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||    
T  10764051 ctggtttcttttgtttgttaatatatttgcatattaaaaaaatgattataattatattgtacatttaattatataa 10764126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 13012461 - 13012385
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| | ||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  13012461 cgtatcccagccgtatcgtatcttgatttttgaaattttcccgtatcgacgtatcggtgcagtatcgtatctcgtat 13012385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 10822805 - 10822885
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||| | |||||||||||||||||||||||||||||||       ||||||| ||||||||||||||||||||||||||    
T  10822805 tatgacggttttcttttgtttgttaatatatttgcatattaaaaaaatggttatgattatattgtacatttaattatataa 10822885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 3427802 - 3427960
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| |||||||||       ||||||||||||||||||| |||||||||||||         |||    | | | |||    
T  3427802 ctggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttataattatattgtaaatttaattatata---------attttttttttaacgt 3427892  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||| | ||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  3427893 atcccagccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 3427960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 4027429 - 4027363
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| |||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  4027429 ccgtatcgtatcttgatttttgaaaattttccgtatcgacgtatcggtgcagtatcgtatctcgtat 4027363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 5985131 - 5985206
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| ||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||    
T  5985131 ctggtttcttgtgtttgttaatatatttgcatattaaaaaaattgttataattatattgtacatttaattatataa 5985206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 25257559 - 25257716
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||          |||    ||| | |||    
T  25257559 ctggtttcttgtgtttgttaatatatttgcatattaaaaaa-tggttataattatattgtacatttaattatat---------gatttttttattaacgt 25257648  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||| | ||||||| |||||| ||||||||| ||||||| ||||| |||||||||||||||| |||||    
T  25257649 atcccagccgtatcgtatcttgatttttgaaatttttccatatcggcgtatcggtgcagtatcgtatc 25257716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 36363138 - 36363068
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| | ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||    
T  36363138 cgtatcccagccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 36363068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 29168358 - 29168436
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatat 87  Q
    |||| ||||||||||||||||| |||||||||||||||||       |||||||||||||||| |||||||||||||||    
T  29168358 tatggctggtttcttttgtttgctaatatatttgcatattaaaaaaatggttataattatattctacatttaattatat 29168436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 28658560 - 28658488
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||| ||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||||||    
T  28658560 gtttcttgtgtttgttaatatatctgcatattaaaaaaatggttataattatattgtacatttaattatataa 28658488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 34096259 - 34096179
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||| ||||||||||||||||||||||| ||||||||||       || ||||||||||||| |||||||||||||||||    
T  34096259 tatgaatggtttcttttgtttgttaatatgtttgcatattaaaaaaatgcttataattatattatacatttaattatataa 34096179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 37922625 - 37922705
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||| ||||||||| |||||||||||||| |||||||||       ||||||||||||||||||| ||||||||||||||    
T  37922625 tatgaatggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttataattatattgtaaatttaattatataa 37922705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 6916025 - 6915867
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| ||||||| |       ||||||||||||||| ||||||||||||||||||         ||    ||| | |||    
T  6916025 ctggtttcttgtgtttgttaatatacttgcataataaaaaaatggttataattatatagtacatttaattatataa---------tttttttattaacgt 6915935  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||  | ||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||    
T  6915934 atctcagccgtatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatc 6915867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 8133124 - 8133282
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| ||||||| |       ||||||||||||||| ||||||||||||||||||         ||    ||| | |||    
T  8133124 ctggtttcttgtgtttgttaatatacttgcataataaaaaaatggttataattatatagtacatttaattatataa---------tttttttattaacgt 8133214  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||| | ||||||| |||||| ||||||||| |||| ||||||||||||||| ||||||||| |||||    
T  8133215 atcccagccgtatcgtatcttgatttttgaaattttaccgtatcgacgtatcagtgcagtatcgtatc 8133282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 37346515 - 37346359
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgtatc 116  Q
    ||||||| ||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||         ||    ||| | ||||||    
T  37346515 gtttcttgtgtttgttaatatatttgcatattaaaaaaaaggttataattatattatacatttaattatataat--------tttttttattaacgtatc 37346424  T
Q  117 caaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    | | ||||||| |||||| ||||||||| |||| ||||||| ||||||||||||||||| |||||    
T  37346423 ccagccgtatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 37346359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 38218878 - 38218944
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||| ||||||||| |||||| ||||    
T  38218878 ccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcagtgcagtatcgtatcttgtat 38218944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 38331394 - 38331552
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| ||||||| |       ||||||||||||||| ||||||||||||||||||         ||    ||| | |||    
T  38331394 ctggtttcttgtgtttgttaatatacttgcataataaaaaaatggttataattatatagtacatttaattatataa---------tttttttattaacgt 38331484  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||  | ||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||    
T  38331485 atctcagccgtatcgtatcttgatttttgaaattttaccgtatcgacgtatcggtgcagtatcgtatc 38331552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 47656139 - 47656181
Alignment:
Q  6 agatatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  47656139 agatatgactggtttcttttgtttgttaatatatttgcatatt 47656181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 52894864 - 52894706
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| ||||||| |       ||||||||||||||| ||||||||||||||||||         ||    ||| | |||    
T  52894864 ctggtttcttgtgtttgttaatatacttgcataataaaaaaatggttataattatatagtacatttaattatataa---------tttttttattaacgt 52894774  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||  | ||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||    
T  52894773 atctcagccgtatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatc 52894706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 31652877 - 31652812
Alignment:
Q  122 cgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    |||||| |||||| ||||||||| |||||||||||| ||||||||||||| ||| |||||||||||    
T  31652877 cgtatcgtatcttgatttttgaaatttttccgtatcaacgtatcggtgcaatatcgtatctcgtat 31652812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 38949098 - 38949172
Alignment:
Q  15 tggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||| |||||||||||||| |||||||||       ||||||||||||||| ||||||||||||||||||    
T  38949098 tggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttataattatatagtacatttaattatataa 38949172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 1036947 - 1037008
Alignment:
Q  28 ttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  1036947 ttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 1037008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 1043853 - 1043914
Alignment:
Q  28 ttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  1043853 ttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 1043914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 3703887 - 3703835
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtat 175  Q
    ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  3703887 gtatcgtatcttaatttttgaaattttttcgtatcgacgtatcggtgcagtat 3703835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 15417980 - 15418061
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt-nnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||| |||||||| ||||||||||||||||||||||||        | ||||||||||||||||||||||||||||||||    
T  15417980 tatgaccggtttcttgtgtttgttaatatatttgcatattaaaaaaatttgttataattatattgtacatttaattatataa 15418061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 20409184 - 20409113
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatct 182  Q
    ||||||| | ||||||| |||||| ||||||||| ||||||||||||| | |||||||||||||| ||||||    
T  20409184 cgtatcccagccgtatcgtatcttgatttttgaaatttttccgtatcggcatatcggtgcagtatcgtatct 20409113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 32380765 - 32380608
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatg 108  Q
    |||||| | |||||||||||||||||||||||||||||||       | |||||||||| |||||||||||||||||||||         ||  | |||     
T  32380765 tatgaccgatttcttttgtttgttaatatatttgcatattaaaaaa-tagttataattacattgtacatttaattatataat--------ttttcttatt 32380675  T
Q  109 agcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtat 175  Q
    | | ||||  | |||||||||||||| ||||||||| ||||||||||||||||||||  ||||||||    
T  32380674 aacatatctcagccgtatcatatcttgatttttgaaatttttccgtatcgacgtatcattgcagtat 32380608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 24851904 - 24851942
Alignment:
Q  10 atgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24851904 atgactggtttcttttgtttgttaatatatttgcatatt 24851942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 37104695 - 37104753
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  37104695 gtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatc 37104753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 10822908 - 10822968
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| ||| |||||||| |||||||||| ||||||||||||    
T  10822908 ccgtatcgtatcttgatttttgaaatttctccgtatcaacgtatcggtacagtattgtatc 10822968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 29168462 - 29168522
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||||||||||||| |||| | ||||||||||||||||||| ||| |||||    
T  29168462 ccgtatcgtatcttaatttttgaaattttcctgtatcgacgtatcggtgcaatatcgtatc 29168522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 4027523 - 4027452
Alignment:
Q  16 ggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||| |||||||||||||       |||||||| |||||||||| ||||||||||||||    
T  4027523 ggtttcttttgtttgttaacatatttgcatatt--aaaaatggttatagttatattgtatatttaattatataa 4027452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 2472683 - 2472650
Alignment:
Q  15 tggtttcttttgtttgttaatatatttgcatatt 48  Q
    ||||||||||||||||||||||||||||||||||    
T  2472683 tggtttcttttgtttgttaatatatttgcatatt 2472650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 3703932 - 3703900
Alignment:
Q  58 gttataattatattgtacatttaattatataaa 90  Q
    |||||||||||||||||||||||||||||||||    
T  3703932 gttataattatattgtacatttaattatataaa 3703900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 10764150 - 10764216
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| ||||||||| ||||| | ||||  |||||| ||||||||| |||||||||||    
T  10764150 ccgtatcgtatcttgatttttgaaattttttcatatcagcgtatcagtgcagtatcgtatctcgtat 10764216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 28658464 - 28658402
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctc 183  Q
    ||||||| |||||| |||||||||  |||||||||||| | ||| |||||||||| |||||||    
T  28658464 ccgtatcgtatcttgatttttgaaaattttccgtatcggcatataggtgcagtatcgtatctc 28658402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 5985234 - 5985298
Alignment:
Q  125 atcatatcttaatttttgaattttttccgtatcgacgtatcg--gtgcagtattgtatctcgtat 187  Q
    ||| |||||| ||||||||| |||||||||||| ||||||||  ||||||||| |||||| ||||    
T  5985234 atcgtatcttgatttttgaaatttttccgtatcaacgtatcggtgtgcagtatcgtatcttgtat 5985298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 8e-23; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 27397280 - 27397115
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    ||||||||||  |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||         ||    ||| |  ||    
T  27397280 ctggtttcttgggtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataatt-------tttttttattaatgt 27397188  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgta 186  Q
    |||| | ||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||||||    
T  27397187 atcccagccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatctcgta 27397115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 33454532 - 33454617
Alignment:
Q  6 agatatgactggtttcttttgtttgttaatatatttgcatatt-nnnnnnntggttataattatattgtacatttaattatataaa 90  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||| |||||||||||||||||    
T  33454532 agatatgactggtttcttttgtttgttaatatatttgcatattaaaaaaaatggttataattatattgcacatttaattatataaa 33454617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 554597 - 554435
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatg 108  Q
    |||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||  |||||||||||         ||    |||     
T  554597 tatgactgctttcttttgtttgttaatatatttgcatattaaaaaaatggttataattatattgtaca--taattatataa--------ttttttttatt 554508  T
Q  109 agcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    | ||||||| | ||||||| |||||| ||||||||| |||| |||||||| ||||||||||||||||||||||    
T  554507 aacgtatcccagccgtatcgtatcttgatttttgaaattttcccgtatcggcgtatcggtgcagtattgtatc 554435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 23078794 - 23078714
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||| ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||| ||||    
T  23078794 tatgattggtttcttttgtttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattagataa 23078714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 26973469 - 26973549
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| |||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||    
T  26973469 tatgactgatttcttttgtttgttaatatgtttgcatattaaaaaaatggttataattatattgtacatttaattatataa 26973549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 44959022 - 44958942
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| |||||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  44959022 tatgactgatttcttttgtctgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 44958942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 19820683 - 19820602
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt-nnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  19820683 tatgactggtttcttgtgtttgttaatatatttgcatattaagaaaaatggttataattatattgtacatttaattatataa 19820602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 35136437 - 35136517
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||| || ||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||    
T  35136437 tatgactggtttattgtgtttgttaatatatttgcatattaaaaaaattgttataattatattgtacatttaattatataa 35136517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 44270150 - 44270230
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| |||||||||||||||||||||||||||||||       |||||||||||||||| || ||||||||||||||    
T  44270150 tatgactgatttcttttgtttgttaatatatttgcatattaaaaaaatggttataattatattatatatttaattatataa 44270230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 16563816 - 16563752
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||| |||||| ||||||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  16563816 gtatcgtatcttgatttttgaaatttttccgtatcaacgtatcggtgcaatattgtatctcgtat 16563752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 16601846 - 16601910
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||| |||||| ||||||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  16601846 gtatcgtatcttgatttttgaaatttttccgtatcaacgtatcggtgcaatattgtatctcgtat 16601910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 21180248 - 21180329
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataa 89  Q
    |||||||| |||||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||||    
T  21180248 tatgactgatttcttttgtttgttaatatatttacatattaaaaaaaatggttataattatattgtacatttaattatataa 21180329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 36413777 - 36413936
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataaannnnnnnattagcgtat 107  Q
    |||||||| |||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||| ||||        |||    |||    
T  36413777 tatgactgatttcttttgtttgttaatatatttgcatattaaaaaaaatggttataattatattgttcatttaattacataa----ttttatt----tat 36413868  T
Q  108 gagcgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtat 175  Q
     | ||||||| | ||||||| |||||| ||||||||| |||| ||||||||||||||| |||||||||    
T  36413869 taacgtatcccagccgtatcgtatcttgatttttgaaattttcccgtatcgacgtatcagtgcagtat 36413936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 15 - 173
Target Start/End: Original strand, 42897347 - 42897497
Alignment:
Q  15 tggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgta 114  Q
    ||||||||| |||||||||||||| |||||||||       ||||||||||||||| ||||||||||||||||||         ||    ||| | ||||    
T  42897347 tggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttataattatatagtacatttaattatataa--------ttttttttattaacgta 42897438  T
Q  115 tccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagt 173  Q
    ||| | ||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||    
T  42897439 tcccagccgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcggtgcagt 42897497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 36763473 - 36763398
Alignment:
Q  13 actggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||||       ||||||| |||||||||| |||||||||||||||    
T  36763473 actggtttcttttgtttgttaatatatttgcatattaaaaaaatggttat-attatattgtgcatttaattatataa 36763398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 26843626 - 26843568
Alignment:
Q  129 tatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  26843626 tatcttgatttttgaaatttttccgtatcggcgtatcggtgcagtatcgtatctcgtat 26843568  T

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Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 36661415 - 36661489
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| | ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  36661415 ctggtttcttgt-tttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 36661489  T

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Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 39521520 - 39521595
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||  |||||||||       ||||||||||||||||||||||||||||||||||    
T  39521520 ctggtttcttgtgtttgttaatatccttgcatattcaaaaaatggttataattatattgtacatttaattatataa 39521595  T

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Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 40096614 - 40096772
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataaannnnnnnattagcgtatgagcgt 113  Q
    |||||||||| |||||||||||||| ||||||| |       ||||||||||||||| ||||||||||||||||||         ||    ||| | |||    
T  40096614 ctggtttcttgtgtttgttaatatacttgcataataaaaaaatggttataattatatagtacatttaattatataa---------tttttttattaacgt 40096704  T
Q  114 atccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||  | ||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||    
T  40096705 atctcagccgtatcgtatcttgatttttgaaattttgccgtatcgacgtatcggtgcagtatcgtatc 40096772  T

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Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 47718765 - 47718695
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| ||||||||  |||||| |||||||||||||||||| |||| |||||||||||||||| |||||    
T  47718765 cgtatcccaaccgtattgtatcttgatttttgaattttttccgcatcggcgtatcggtgcagtatcgtatc 47718695  T

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Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 48154554 - 48154624
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| ||||||||| |||||| ||||||||| ||||  |||||||||||||||||||||||| |||||    
T  48154554 cgtatcccaaccgtatcgtatcttgatttttgaaattttctcgtatcgacgtatcggtgcagtatcgtatc 48154624  T

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Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 19511209 - 19511270
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatct 182  Q
    ||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  19511209 ccgtatcgtatcttgatttttgaaattttcccgtatcgacgtatcggtgcagtatcgtatct 19511270  T

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Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 27554930 - 27554861
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtat 180  Q
    ||||||| | ||||||| |||||||||||||||| ||||||||||||  |||||||||||||||| ||||    
T  27554930 cgtatcccagccgtatcgtatcttaatttttgaaatttttccgtatcagcgtatcggtgcagtatcgtat 27554861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 9249799 - 9249739
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||| |||||    
T  9249799 ccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcggtatcgtatc 9249739  T

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Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 9283349 - 9283289
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||| |||||    
T  9283349 ccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcggtatcgtatc 9283289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 25970134 - 25970194
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||| |||||    
T  25970134 ccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcggtatcgtatc 25970194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 47237909 - 47237836
Alignment:
Q  15 tggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatata 88  Q
    ||||||||| ||||||||||||||||| ||||||       ||||||||||||||||||||||||| |||||||    
T  47237909 tggtttcttatgtttgttaatatatttccatattaaaaaaatggttataattatattgtacatttagttatata 47237836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 21409805 - 21409877
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||| |||||        ||||||||||||||||||| ||||||||||||||    
T  21409805 gtttcttttgtttgttaatatattttcatatgaaaaaaatggttataattatattgtatatttaattatataa 21409877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 35160396 - 35160462
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| |||||| |||||| || ||||||||||||||||||||| ||||||||  ||||||||||    
T  35160396 ccgtatcgtatcttgatttttaaaatttttccgtatcgacgtatcgatgcagtatcatatctcgtat 35160462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 36757693 - 36757619
Alignment:
Q  13 actggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||||       ||||||| |||||||||| |||||||||||||||    
T  36757693 actggtttcttttgtttgttaatatatttgcatatt-aaaaaatggttat-attatattgtgcatttaattatataa 36757619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 36767217 - 36767143
Alignment:
Q  13 actggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||||       ||||||| |||||||||| |||||||||||||||    
T  36767217 actggtttcttttgtttgttaatatatttgcatatt-aaaaaatggttat-attatattgtgcatttaattatataa 36767143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 1042643 - 1042583
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| |||| ||||||| ||||||||||||||||| |||||    
T  1042643 ccgtatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtatcgtatc 1042583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 8029341 - 8029417
Alignment:
Q  111 cgtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    ||||||| | ||||||| |||||| ||||||||| |||| || ||||| |||||| ||||||||| |||||||||||    
T  8029341 cgtatcccagccgtatcgtatcttgatttttgaaattttcccatatcggcgtatcagtgcagtatcgtatctcgtat 8029417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 12103486 - 12103546
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| ||||||||||||  |||||||||||||||| |||||    
T  12103486 ccgtatcgtatcttgatttttgaaatttttccgtatcagcgtatcggtgcagtatcgtatc 12103546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 9249996 - 9249957
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  9249996 tatgactgatttcttttgtttgttaatatatttgcatatt 9249957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 9283546 - 9283507
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  9283546 tatgactgatttcttttgtttgttaatatatttgcatatt 9283507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 11830644 - 11830720
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatatt-nnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| ||||||||||||||||||||||||        ||| || |||||||||||||||||||||||||||    
T  11830644 ctggtttcttgtgtttgttaatatatttgcatattaaaaaaaatgggtacaattatattgtacatttaattatataa 11830720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 24956654 - 24956734
Alignment:
Q  8 atatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    ||||||||| ||||||||||||| |||||||||||||||||       | ||| |||||||| |||||||||||||||||||    
T  24956654 atatgactgatttcttttgtttgctaatatatttgcatatt-aaaaaatagttttaattatactgtacatttaattatataa 24956734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 25969937 - 25969976
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  25969937 tatgactgatttcttttgtttgttaatatatttgcatatt 25969976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 26843735 - 26843659
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||| |||||||||        ||||||||||||||| ||||||||||||||||||    
T  26843735 ctggtttcttgtgtttgttaatatacttgcatattaaaaaaaatggttataattatatagtacatttaattatataa 26843659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 34122207 - 34122148
Alignment:
Q  122 cgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||||| |||||| ||||||||| ||||| |||||||||||||| ||||||||| |||||    
T  34122207 cgtatcgtatcttgatttttgaaattttttcgtatcgacgtatcagtgcagtatcgtatc 34122148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 35160300 - 35160375
Alignment:
Q  13 actggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||| |||||||||||||||||||||||||||||||       ||||||| |||||||||| ||||||||| |||||    
T  35160300 actgatttcttttgtttgttaatatatttgcatattaaaaaaatggttat-attatattgtgcatttaattgtataa 35160375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 38065119 - 38065161
Alignment:
Q  6 agatatgactggtttcttttgtttgttaatatatttgcatatt 48  Q
    ||||||||||| ||| |||||||||||||||||||||||||||    
T  38065119 agatatgactgatttattttgtttgttaatatatttgcatatt 38065161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 38065231 - 38065289
Alignment:
Q  123 gtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||| |||||| ||||||||| ||||||||||||| | |||||||||||||| |||||    
T  38065231 gtatcgtatcttgatttttgaaatttttccgtatcggcatatcggtgcagtatcgtatc 38065289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 44958918 - 44958852
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatctcgtat 187  Q
    |||||||||||||| |||||| ||  ||||| |||||| ||||||||||||||||  ||||||||||    
T  44958918 ccgtatcatatcttgatttttaaaaattttctgtatcgccgtatcggtgcagtatcatatctcgtat 44958852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 9249856 - 9249823
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||    
T  9249856 tggttataattatattgtacatttaattatataa 9249823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 9283406 - 9283373
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||    
T  9283406 tggttataattatattgtacatttaattatataa 9283373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 25970077 - 25970110
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||    
T  25970077 tggttataattatattgtacatttaattatataa 25970110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 26773164 - 26773095
Alignment:
Q  112 gtatccaaaccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    |||||| | ||||||| |||||| |||||| || |||| ||||||||||||||| ||||||||| |||||    
T  26773164 gtatcccagccgtatcgtatcttgatttttaaaattttcccgtatcgacgtatcagtgcagtatcgtatc 26773095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 48153960 - 48154026
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaatt 83  Q
    |||| ||||||||||||||||||||| |||||       ||||||||||||||||||||||| ||||    
T  48153960 gttttttttgtttgttaatatatttgtatattaaaaaaatggttataattatattgtacattaaatt 48154026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 1042739 - 1042666
Alignment:
Q  17 gtttcttttgtttgttaatatatttgcatattnnnnnnnt-ggttataattatattgtacatttaattatataa 89  Q
    ||||||| ||||||||||||||||||||||||         ||||||||||||||| |||||||||||||||||    
T  1042739 gtttcttgtgtttgttaatatatttgcatattaaaaaaaaaggttataattatattatacatttaattatataa 1042666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 4292211 - 4292271
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| |||| || |||| ||||||||||||||||| |||||    
T  4292211 ccgtatcgtatcttgatttttgaaattttcccatatcaacgtatcggtgcagtatcgtatc 4292271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 11058844 - 11058925
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntg-gttataattatattgtacatttaattatataa 89  Q
    ||||||| ||||||| ||||||||||||||||||||||||       ||  || ||||||||||||| ||||||||||||||    
T  11058844 tatgactagtttcttgtgtttgttaatatatttgcatattagaaaattgttttttaattatattgtatatttaattatataa 11058925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 39521633 - 39521672
Alignment:
Q  136 atttttgaattttttccgtatcgacgtatcggtgcagtat 175  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  39521633 atttttgaaatttttccgtatcgacgtatcgatgcagtat 39521672  T

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Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 89
Target Start/End: Complemental strand, 47718811 - 47718780
Alignment:
Q  58 gttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||    
T  47718811 gttataattatattgtacatttaattatataa 47718780  T

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Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 26973573 - 26973631
Alignment:
Q  122 cgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtat 180  Q
    |||||| |||||| ||||||||| ||||||||||||| ||||||  |||||||| ||||    
T  26973573 cgtatcgtatcttgatttttgaaatttttccgtatcggcgtatcaatgcagtatcgtat 26973631  T

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Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 16851355 - 16851392
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcg 158  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  16851355 ccgtatcgtatcttaatttttgaaatttttccgtatcg 16851392  T

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Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 21180352 - 21180412
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||||| |||||||  |||||||||||  ||||||| |||||||| |||||    
T  21180352 ccgtatcgtatcttaaattttgaaagttttccgtatcagcgtatcgatgcagtatcgtatc 21180412  T

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Target: scaffold0005 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 43766 - 43691
Alignment:
Q  14 ctggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||| |||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||    
T  43766 ctggtttcttgtgtttgttaatatacttgcatattaaaaaaatggttataattatattgtacatttaattatataa 43691  T

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Target: scaffold0005; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 202468 - 202390
Alignment:
Q  9 tatgactggtttcttttgtttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||| ||||||||||||||||||||||||| |||||       |||||||| |||||||||| ||||||||||||||    
T  202468 tatgactgatttcttttgtttgttaatatatttgtatatt--aaaaatggttatatttatattgtatatttaattatataa 202390  T

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Target: scaffold0177 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 24960 - 24900
Alignment:
Q  121 ccgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtattgtatc 181  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||    
T  24960 ccgtatcgtatcttgatttttgaaatttttccgtatcgacgtatcggtgcagtatcgtatc 24900  T

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Target: scaffold0177; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 25045 - 24984
Alignment:
Q  28 ttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||| |||||    
T  25045 ttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattgtataa 24984  T

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Target: scaffold0640 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 7583 - 7522
Alignment:
Q  28 ttgttaatatatttgcatattnnnnnnntggttataattatattgtacatttaattatataa 89  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  7583 ttgttaatatatttgcatattaaaaaaatggttataattatattgtacatttaattatataa 7522  T

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Target: scaffold0285 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 13827 - 13911
Alignment:
Q  6 agatatgactggtttcttttgtttgttaatatatttgcatattnnnnnnn-tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||        | ||||||||||||||||||||||||||||||||    
T  13827 agatatgactggtttattttgtttgctaatatatctgcatattaaaaaaaattgttataattatattgtacatttaattatataa 13911  T

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Target: scaffold0250 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 6184 - 6237
Alignment:
Q  122 cgtatcatatcttaatttttgaattttttccgtatcgacgtatcggtgcagtat 175  Q
    |||||| |||||| ||||||||| |||| ||||||| |||||||||||||||||    
T  6184 cgtatcgtatcttgatttttgaaattttcccgtatcaacgtatcggtgcagtat 6237  T

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Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 29764 - 29731
Alignment:
Q  56 tggttataattatattgtacatttaattatataa 89  Q
    ||||||||||||||||||||||||||||||||||    
T  29764 tggttataattatattgtacatttaattatataa 29731  T

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