View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13407_low_9 (Length: 240)
Name: NF13407_low_9
Description: NF13407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13407_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 28637035 - 28636848
Alignment:
| Q |
1 |
cctaagttaagtgtcataggaattggttctataactacagttgttacgataattatattatgagttgtaaatttagttcgtcaggtaacttttctgtttt |
100 |
Q |
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| T |
28637035 |
cctaagttaagtgtcataggaattggttctataactacagttgttacgataattatattatgagttgtaaatttagttcgtcaggtaacttttctgtttt |
28636936 |
T |
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| Q |
101 |
ggttgccaagtg-tttgttgaggaagagaaagaaaa---tcttgtgttaggaagaaagatgtattttggaatgattggctcttacaaa |
184 |
Q |
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| T |
28636935 |
ggttgccaagtgttttgttgaggaagagaaagaaaatcttcttgtgttaggaagaaagatgtattttggaatgattggctcttacaaa |
28636848 |
T |
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