View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13409_high_10 (Length: 395)

Name: NF13409_high_10
Description: NF13409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13409_high_10
NF13409_high_10
[»] chr5 (18 HSPs)
chr5 (144-376)||(600579-600812)
chr5 (147-198)||(38972186-38972237)
chr5 (147-197)||(20946081-20946131)
chr5 (1-79)||(600877-600954)
chr5 (150-195)||(20976353-20976398)
chr5 (150-195)||(29866185-29866230)
chr5 (147-195)||(11980712-11980760)
chr5 (147-195)||(27642498-27642546)
chr5 (147-195)||(39690546-39690594)
chr5 (152-195)||(10656588-10656631)
chr5 (2-36)||(33862788-33862822)
chr5 (147-195)||(3559087-3559135)
chr5 (147-195)||(14044558-14044606)
chr5 (147-195)||(18729584-18729632)
chr5 (147-195)||(21912116-21912164)
chr5 (147-187)||(32067832-32067872)
chr5 (150-198)||(35569068-35569116)
chr5 (147-195)||(43060570-43060618)
[»] chr4 (20 HSPs)
chr4 (147-237)||(29584849-29584938)
chr4 (147-195)||(31486484-31486532)
chr4 (147-204)||(41920099-41920156)
chr4 (147-196)||(56373405-56373454)
chr4 (149-205)||(14602718-14602774)
chr4 (147-195)||(38136351-38136399)
chr4 (1-36)||(29585049-29585084)
chr4 (147-196)||(19654423-19654472)
chr4 (147-195)||(12624692-12624740)
chr4 (147-195)||(39414232-39414280)
chr4 (153-195)||(20185723-20185765)
chr4 (154-196)||(31840093-31840135)
chr4 (150-195)||(5536493-5536538)
chr4 (150-195)||(20262458-20262503)
chr4 (150-195)||(25477221-25477266)
chr4 (150-195)||(30153286-30153331)
chr4 (150-195)||(50782774-50782819)
chr4 (147-195)||(20291336-20291384)
chr4 (147-187)||(20791931-20791971)
chr4 (147-195)||(37175083-37175130)
[»] chr1 (22 HSPs)
chr1 (147-204)||(25258316-25258373)
chr1 (147-215)||(13723538-13723605)
chr1 (147-204)||(32152144-32152201)
chr1 (147-195)||(4813522-4813570)
chr1 (147-195)||(38680470-38680518)
chr1 (147-205)||(10842314-10842372)
chr1 (147-196)||(3143794-3143843)
chr1 (147-195)||(15179405-15179453)
chr1 (147-195)||(15512841-15512889)
chr1 (147-195)||(28949024-28949072)
chr1 (147-187)||(47754702-47754742)
chr1 (147-194)||(50692405-50692452)
chr1 (147-197)||(32144304-32144354)
chr1 (150-195)||(16582528-16582573)
chr1 (150-195)||(28334278-28334323)
chr1 (150-195)||(30898626-30898671)
chr1 (147-195)||(6282469-6282517)
chr1 (147-187)||(15911612-15911652)
chr1 (147-195)||(23393572-23393620)
chr1 (147-187)||(28723713-28723753)
chr1 (147-195)||(30336054-30336102)
chr1 (147-195)||(31305313-31305361)
[»] chr8 (21 HSPs)
chr8 (147-216)||(14577714-14577782)
chr8 (147-195)||(22590371-22590419)
chr8 (147-195)||(31746467-31746515)
chr8 (156-204)||(2031210-2031258)
chr8 (152-198)||(14522671-14522717)
chr8 (147-197)||(16644098-16644148)
chr8 (147-195)||(7172215-7172263)
chr8 (147-195)||(24962427-24962475)
chr8 (147-195)||(26878790-26878838)
chr8 (147-195)||(34882666-34882714)
chr8 (147-195)||(43980645-43980693)
chr8 (150-197)||(5191614-5191660)
chr8 (1-36)||(14577565-14577600)
chr8 (2-36)||(45183778-45183812)
chr8 (147-192)||(3006843-3006888)
chr8 (147-196)||(25888590-25888639)
chr8 (150-195)||(37956117-37956162)
chr8 (147-216)||(45203735-45203802)
chr8 (147-195)||(24276617-24276665)
chr8 (147-187)||(36437505-36437545)
chr8 (147-195)||(38770249-38770297)
[»] chr3 (23 HSPs)
chr3 (147-204)||(20945363-20945420)
chr3 (147-224)||(52325566-52325642)
chr3 (147-195)||(11388116-11388164)
chr3 (147-195)||(29676802-29676850)
chr3 (147-225)||(31650728-31650805)
chr3 (147-195)||(14645952-14646000)
chr3 (147-195)||(42010863-42010911)
chr3 (150-198)||(51263074-51263122)
chr3 (150-197)||(12077809-12077856)
chr3 (150-197)||(26517281-26517328)
chr3 (147-194)||(27047241-27047288)
chr3 (152-195)||(28228174-28228217)
chr3 (147-182)||(33412036-33412071)
chr3 (150-195)||(13084424-13084469)
chr3 (150-195)||(31531491-31531536)
chr3 (150-195)||(46048517-46048562)
chr3 (150-195)||(46435796-46435841)
chr3 (153-197)||(831429-831473)
chr3 (147-195)||(11344553-11344601)
chr3 (147-195)||(11393917-11393965)
chr3 (147-195)||(27638140-27638188)
chr3 (147-195)||(37729092-37729140)
chr3 (147-195)||(49000447-49000495)
[»] chr7 (23 HSPs)
chr7 (147-195)||(37491680-37491728)
chr7 (147-197)||(31373759-31373809)
chr7 (147-195)||(26201029-26201077)
chr7 (147-187)||(29992979-29993019)
chr7 (147-197)||(48193609-48193659)
chr7 (147-196)||(27170007-27170056)
chr7 (147-196)||(27213482-27213531)
chr7 (148-196)||(46783903-46783951)
chr7 (147-198)||(21392954-21393005)
chr7 (152-195)||(27162968-27163011)
chr7 (151-197)||(19236132-19236178)
chr7 (147-181)||(41672628-41672662)
chr7 (150-195)||(4089564-4089609)
chr7 (154-195)||(6376201-6376242)
chr7 (150-195)||(10685081-10685126)
chr7 (150-195)||(20123446-20123491)
chr7 (46-79)||(33181407-33181440)
chr7 (147-196)||(35960373-35960422)
chr7 (150-195)||(40211341-40211386)
chr7 (147-195)||(20124184-20124232)
chr7 (147-195)||(26632842-26632890)
chr7 (8-36)||(29723616-29723644)
chr7 (147-195)||(40740946-40740994)
[»] chr2 (25 HSPs)
chr2 (147-197)||(21012847-21012897)
chr2 (147-195)||(8384033-8384081)
chr2 (150-197)||(44424589-44424636)
chr2 (147-216)||(43709894-43709963)
chr2 (147-204)||(2131744-2131801)
chr2 (147-187)||(2395806-2395846)
chr2 (147-195)||(17663620-17663668)
chr2 (147-195)||(20361979-20362027)
chr2 (150-197)||(45214719-45214766)
chr2 (149-183)||(11071676-11071710)
chr2 (147-197)||(13477094-13477144)
chr2 (2-36)||(31644358-31644392)
chr2 (150-195)||(15851527-15851572)
chr2 (150-195)||(27297573-27297618)
chr2 (150-195)||(37355032-37355077)
chr2 (147-195)||(247656-247704)
chr2 (147-187)||(2917158-2917198)
chr2 (147-195)||(3645319-3645367)
chr2 (147-195)||(4398585-4398632)
chr2 (147-198)||(6275628-6275680)
chr2 (147-187)||(32677479-32677519)
chr2 (147-195)||(36174853-36174901)
chr2 (147-195)||(41865712-41865760)
chr2 (147-195)||(42250937-42250985)
chr2 (152-192)||(45150802-45150842)
[»] scaffold0005 (1 HSPs)
scaffold0005 (149-205)||(214604-214660)
[»] chr6 (12 HSPs)
chr6 (147-195)||(31945974-31946022)
chr6 (147-198)||(12514647-12514698)
chr6 (10-79)||(3729534-3729603)
chr6 (150-195)||(1763809-1763854)
chr6 (147-240)||(3888004-3888096)
chr6 (150-195)||(22410908-22410953)
chr6 (147-196)||(31780119-31780168)
chr6 (147-195)||(19838927-19838975)
chr6 (150-196)||(15981789-15981835)
chr6 (150-195)||(5895727-5895772)
chr6 (150-195)||(11302851-11302896)
chr6 (147-187)||(3729393-3729433)
[»] scaffold0012 (1 HSPs)
scaffold0012 (147-197)||(99878-99928)
[»] scaffold1091 (1 HSPs)
scaffold1091 (147-195)||(1974-2022)
[»] scaffold0176 (1 HSPs)
scaffold0176 (147-196)||(19527-19576)


Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 144 - 376
Target Start/End: Complemental strand, 600812 - 600579
Alignment:
Q  144 cataatagacacattaattgcactaacaagttttcttaagaaata-tgaaaaatgttaaagggtgcatacatacgaggacgaatgaagtattttttaagg 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  600812 cataatagacacattaattgcactaacaagttttcttaagaaatactccaaaatgttaaagggtgcatacatacaaggacgaatgaagtattttttaagg 600713  T
Q  243 attccaaaataaaaatcgatgcggtcagatgatggttgtggtggtatgttgttcattgaactgttgtcaccgtggtgttgtggtggctgcggttgttgtt 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  600712 attccaaaataaaaatcgatgcggtcagatgatggttgtggtggtatgctgtttattgaactgctgtcaccgtggtgttgtggtggctgcggttgttgtt 600613  T
Q  343 ttaaaaaagagtcagttcgcatccacttcgttgt 376  Q
    |||||||| |||||||||||||||||||||||||    
T  600612 ttaaaaaacagtcagttcgcatccacttcgttgt 600579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 38972186 - 38972237
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgt 198  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  38972186 aatagacacattaattacactaacaacttttcttaagaaatgtgaaaaatgt 38972237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 20946131 - 20946081
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  20946131 aatagacacgttaattgcactaacaacgtttcttaagaaatatgaaaaatg 20946081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 600954 - 600877
Alignment:
Q  1 ataaactcatttttaaattactagatgcatttattannnnnnnnnaaacataatcctaattaatattactaacttgtct 79  Q
    ||||||| ||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  600954 ataaacttatttttaaatttctagatgcatttatt-tatttttctaaacataatcctaattaatattactaacttgtct 600877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 20976353 - 20976398
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||||    
T  20976353 agacacattaattacactgacaaattttcttaagaaatatgaaaaa 20976398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 29866230 - 29866185
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||||    
T  29866230 agacatattaattgcactaacaacttttcttaagaaatgtgaaaaa 29866185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 11980760 - 11980712
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||||||||| |||| |||| ||||||||||||    
T  11980760 aatagacacattaattacactaacaacttttattaaaaaatatgaaaaa 11980712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 27642546 - 27642498
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||| | ||||||||| |||||||||||||| |||||||    
T  27642546 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 27642498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 39690546 - 39690594
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||| | ||||||||| |||||||||||||| |||||||    
T  39690546 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 39690594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 10656631 - 10656588
Alignment:
Q  152 acacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||| |||||| |||||||||||||| |||||||    
T  10656631 acacattaattgcattaacaatttttcttaagaaatgtgaaaaa 10656588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 33862788 - 33862822
Alignment:
Q  2 taaactcatttttaaattactagatgcatttatta 36  Q
    |||||||||||| ||||||||||||||||||||||    
T  33862788 taaactcattttcaaattactagatgcatttatta 33862822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 3559087 - 3559135
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||||||  || ||||| |||||||||||||| |||||||    
T  3559087 aatagacacattaattataccaacaatttttcttaagaaatgtgaaaaa 3559135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 14044558 - 14044606
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||| ||||| |||| |||||| |||||||||||||| |||||||    
T  14044558 aatagacatattaactgcattaacaacttttcttaagaaatgtgaaaaa 14044606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 18729632 - 18729584
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||| || || |||||||||||||| |||||||    
T  18729632 aatagacacattaattacacaaataatttttcttaagaaatgtgaaaaa 18729584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 21912164 - 21912116
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||| | ||||||||| ||||||||| |||| |||||||    
T  21912164 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 21912116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 32067872 - 32067832
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaat 187  Q
    ||||||||||| |||||||||||| | ||||||||||||||    
T  32067872 aatagacacatgaattgcactaactatttttcttaagaaat 32067832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 35569068 - 35569116
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaatgt 198  Q
    ||||||||||||| |||| | || |||||||||||||| ||||||||||    
T  35569068 agacacattaattacactgataacttttcttaagaaatgtgaaaaatgt 35569116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 43060570 - 43060618
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||||||||| |||| |||| |||| |||||||    
T  43060570 aatagacacattaattacactaacaacttttattaaaaaatgtgaaaaa 43060618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 29584938 - 29584849
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagggtgcatacatacgaggacgaatgaagtattttt 237  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||||  ||||||||| |||||||  ||||| |||||||||||||    
T  29584938 aatagacacattaattacactaacaatttttcttaagaaatgtgaaaaatg-caaagggtgcttacatacatggacggatgaagtattttt 29584849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 31486532 - 31486484
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  31486532 aatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaa 31486484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 41920099 - 41920156
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagg 204  Q
    |||||| | ||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  41920099 aatagaaatattaattgcactaacaacttttcttaagaaatgtgaaaaatgtaaaagg 41920156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 56373405 - 56373454
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaat 196  Q
    |||| ||||||||||||||||||||| |||||||||||||| ||||||||    
T  56373405 aataaacacattaattgcactaacaatttttcttaagaaatgtgaaaaat 56373454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 14602718 - 14602774
Alignment:
Q  149 tagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaaggg 205  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||| || ||||||    
T  14602718 tagacacattaattacactaacaacttttcttaagaaatgtgaaaaaagtaaaaggg 14602774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 38136399 - 38136351
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  38136399 aatagacacattaattacactaacaaattttcttaagaaatgtgaaaaa 38136351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 29585084 - 29585049
Alignment:
Q  1 ataaactcatttttaaattactagatgcatttatta 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  29585084 ataaactcatttttaaattactagatgcatttatta 29585049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 19654472 - 19654423
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaat 196  Q
    |||||||||||||||| ||||||||  |||||||||||||| ||||||||    
T  19654472 aatagacacattaattacactaacagtttttcttaagaaatgtgaaaaat 19654423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 12624740 - 12624692
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||| |||||||||| ||||||||| |||||||||||||| |||||||    
T  12624740 aatagtcacattaattacactaacaacttttcttaagaaatgtgaaaaa 12624692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 39414280 - 39414232
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||| |||||||||| || ||| ||||||||||||||||||||||    
T  39414280 aatagacatattaattgcattatcaacttttcttaagaaatatgaaaaa 39414232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 20185723 - 20185765
Alignment:
Q  153 cacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||| ||||||||| |||||||||||||| |||||||    
T  20185723 cacattaattacactaacaaattttcttaagaaatgtgaaaaa 20185765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 31840135 - 31840093
Alignment:
Q  154 acattaattgcactaacaagttttcttaagaaatatgaaaaat 196  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||    
T  31840135 acattaattacactaacaatttttcttaagaaatttgaaaaat 31840093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 5536538 - 5536493
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  5536538 agacacattaattacactgacaatttttcttaagaaatgtgaaaaa 5536493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 20262458 - 20262503
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  20262458 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 20262503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 25477266 - 25477221
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  25477266 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 25477221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 30153286 - 30153331
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  30153286 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 30153331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 50782819 - 50782774
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  50782819 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 50782774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 20291384 - 20291336
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| || || ||| |||||||||||||| |||||||    
T  20291384 aatagacacattaattacattaccaacttttcttaagaaatgtgaaaaa 20291336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 20791971 - 20791931
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaat 187  Q
    |||||||| ||||||||||||| ||| ||||||||||||||    
T  20791971 aatagacatattaattgcactaccaacttttcttaagaaat 20791931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 37175083 - 37175130
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||||||    
T  37175083 aatagacacattaattacac-aacaacttttcttaagaaatgtgaaaaa 37175130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 25258373 - 25258316
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagg 204  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  25258373 aatagacacattaattgcactaacaacttttcttaaaaaatatgaaaaatgtaaaagg 25258316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 13723538 - 13723605
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagggtgcatacata 215  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||  ||||||||| ||||||    
T  13723538 aatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaatg-caaagggtgcttacata 13723605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 32152201 - 32152144
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagg 204  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||||||| |||||    
T  32152201 aatagacacattaattgcaccaacaacttttcttaagaaatgtgaaaaatgtaaaagg 32152144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 4813522 - 4813570
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  4813522 aatagacacattaattgcattaacaacttttcttaagaaatgtgaaaaa 4813570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 38680518 - 38680470
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  38680518 aatagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 38680470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 10842372 - 10842314
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaaggg 205  Q
    |||||||| |||||||||| |||||| |||||||||||||| ||||||| || ||||||    
T  10842372 aatagacatattaattgcattaacaacttttcttaagaaatgtgaaaaaagtaaaaggg 10842314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 3143794 - 3143843
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaat 196  Q
    |||||||||||||||| ||||| ||| ||||||||||| |||||||||||    
T  3143794 aatagacacattaattacactatcaacttttcttaagacatatgaaaaat 3143843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 15179453 - 15179405
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| |||| |||| |||||||||||||| |||||||    
T  15179453 aatagacacattaattacactgacaatttttcttaagaaatgtgaaaaa 15179405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 15512841 - 15512889
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||| | ||||||||| |||||||||||||| |||||||    
T  15512841 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 15512889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 28949024 - 28949072
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||| | ||||||||| |||||||||||||| |||||||    
T  28949024 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 28949072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 47754702 - 47754742
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaat 187  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  47754702 aatagacacattaattgcactaacaattttttttaagaaat 47754742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 50692452 - 50692405
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaa 194  Q
    ||||||||||||||||||| | |||| |||||||||||||| ||||||    
T  50692452 aatagacacattaattgcattgacaacttttcttaagaaatgtgaaaa 50692405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 32144354 - 32144304
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    |||||||||||||| ||||| ||||| |||||||||||||| | |||||||    
T  32144354 aatagacacattaaatgcaccaacaacttttcttaagaaatgtaaaaaatg 32144304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 16582573 - 16582528
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  16582573 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 16582528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 28334278 - 28334323
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  28334278 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 28334323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 30898626 - 30898671
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  30898626 agacacattaattacactgacaatttttcttaagaaatgtgaaaaa 30898671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 6282517 - 6282469
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||||||| |||||||| |||||||| ||||  |||||||    
T  6282517 aatagacacattaattgtactaacaatttttcttatgaaacgtgaaaaa 6282469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 15911612 - 15911652
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaat 187  Q
    |||||||||||||| | ||||||||| ||||||||||||||    
T  15911612 aatagacacattaagtacactaacaacttttcttaagaaat 15911652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 23393572 - 23393620
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||| ||||||||| || |||||| ||||||||| ||||||||||||    
T  23393572 aatagatacattaattacattaacaacttttcttaaaaaatatgaaaaa 23393620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 28723713 - 28723753
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaat 187  Q
    |||||||||||||||| ||||||||| ||||||||| ||||    
T  28723713 aatagacacattaattacactaacaacttttcttaaaaaat 28723753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 30336102 - 30336054
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| |||  |||| |||||||||||||| |||||||    
T  30336102 aatagacacattaattacaccgacaacttttcttaagaaatgtgaaaaa 30336054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 31305361 - 31305313
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||| ||||| ||||||||| |||| |||||||    
T  31305361 aatagacacattaattacaccaacaacttttcttaataaatgtgaaaaa 31305313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 14577714 - 14577782
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagggtgcatacatac 216  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||| |||||| ||| |||||||    
T  14577714 aatagacacattaattacactaacaacttttcttaagaaatgtgaaaaatg-taaaggatgcttacatac 14577782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 22590419 - 22590371
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  22590419 aatagacacattaattgcactaacaaattttcttaagaaatgtgaaaaa 22590371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 31746467 - 31746515
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  31746467 aatagacacattaattgcactaacaatttttcttaagaaatgtgaaaaa 31746515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 2031258 - 2031210
Alignment:
Q  156 attaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagg 204  Q
    ||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  2031258 attaattgcactaacaatttttctgaagaaatatgaaaaatgtaaaagg 2031210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 14522671 - 14522717
Alignment:
Q  152 acacattaattgcactaacaagttttcttaagaaatatgaaaaatgt 198  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  14522671 acacattaattacactaacaatttttcttaagaaatgtgaaaaatgt 14522717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 16644098 - 16644148
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    |||| ||||||||||| ||||||||| |||||||||||||| |||||||||    
T  16644098 aatatacacattaattacactaacaacttttcttaagaaatgtgaaaaatg 16644148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 7172263 - 7172215
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||| || ||||||||||||||||| |||||||    
T  7172263 aatagacacattaattacaccaaaaagttttcttaagaaatgtgaaaaa 7172215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 24962427 - 24962475
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||| | ||||||||| |||||||||||||| |||||||    
T  24962427 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 24962475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 26878790 - 26878838
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| || |||||| |||||||||||||| |||||||    
T  26878790 aatagacacattaattacattaacaacttttcttaagaaatgtgaaaaa 26878838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 34882714 - 34882666
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||||||||| |||||| ||||||||| |||| |||||||    
T  34882714 aatagacacattaattgcattaacaatttttcttaaaaaatgtgaaaaa 34882666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 43980645 - 43980693
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||| | ||||||||| |||||||||||||| |||||||    
T  43980645 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 43980693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 5191614 - 5191660
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||||    
T  5191614 agacacattaattgc-ctaacaatttttcttaagaaatgtgaaaaatg 5191660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 14577565 - 14577600
Alignment:
Q  1 ataaactcatttttaaattactagatgcatttatta 36  Q
    |||||||| |||||||||||||||||||||||||||    
T  14577565 ataaactcctttttaaattactagatgcatttatta 14577600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 45183778 - 45183812
Alignment:
Q  2 taaactcatttttaaattactagatgcatttatta 36  Q
    ||||||| |||||||||||||||||||||||||||    
T  45183778 taaactcctttttaaattactagatgcatttatta 45183812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 3006843 - 3006888
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaa 192  Q
    |||||||| |||||||  |||||||| |||||||||||||||||||    
T  3006843 aatagacatattaattatactaacaacttttcttaagaaatatgaa 3006888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 25888639 - 25888590
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaat 196  Q
    |||||||| ||||||| ||||||||| |||||||||||||| | ||||||    
T  25888639 aatagacatattaattacactaacaacttttcttaagaaatgtaaaaaat 25888590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 37956162 - 37956117
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  37956162 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 37956117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 45203802 - 45203735
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagggtgcatacatac 216  Q
    ||||||||||||||||||||||| ||  ||||||||||||| | |||||||  ||||||||| |||||||    
T  45203802 aatagacacattaattgcactaa-aaaatttcttaagaaatgtaaaaaatg-caaagggtgcttacatac 45203735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 24276617 - 24276665
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||||||  |||||||| |||| ||||||||| |||||||    
T  24276617 aatagacacattaattatactaacaactttttttaagaaatgtgaaaaa 24276665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 36437545 - 36437505
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaat 187  Q
    |||||||||||||||||||||||||  ||||||||| ||||    
T  36437545 aatagacacattaattgcactaacattttttcttaaaaaat 36437505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 38770249 - 38770297
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||| ||||||||||| |||| |||| || |||||||||||||||||||    
T  38770249 aataaacacattaattacactgacaacttatcttaagaaatatgaaaaa 38770297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 20945363 - 20945420
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagg 204  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||||| |||||    
T  20945363 aatagacacattaattacactaacaacttttcttaagaaatgtgaaaaatgtaaaagg 20945420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 52325566 - 52325642
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagggtgcatacatacgaggacga 224  Q
    |||||||||||||||| ||||||||  |||||||||||||| |||||||||  |||| |||| |||||||||||||||    
T  52325566 aatagacacattaattacactaacattttttcttaagaaatgtgaaaaatg-caaagagtgcttacatacgaggacga 52325642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 11388164 - 11388116
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  11388164 aatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 11388116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 29676802 - 29676850
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  29676802 aatagacacattaattacactgacaatttttcttaagaaatatgaaaaa 29676850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 31650728 - 31650805
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagggtgcatacatacgaggacgaa 225  Q
    ||||||||||||||||||| |||||| |||| |||| |||| |||||||||  ||||||||| ||||||  ||||||||    
T  31650728 aatagacacattaattgcattaacaattttttttaataaatgtgaaaaatg-caaagggtgcttacatataaggacgaa 31650805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 14645952 - 14646000
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||||||||| ||||||||| |||| |||||||    
T  14645952 aatagacacattaattacactaacaacttttcttaaaaaatgtgaaaaa 14646000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 42010911 - 42010863
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| || |||||| |||||||||||||| |||||||    
T  42010911 aatagacacattaattacattaacaaattttcttaagaaatgtgaaaaa 42010863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 51263122 - 51263074
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaatgt 198  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||||||    
T  51263122 agacacattaattacactaacaattttttttaagaaatgtgaaaaatgt 51263074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 12077809 - 12077856
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||||    
T  12077809 agacacattaattacactgacaacttttcttaagaaatttgaaaaatg 12077856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 26517281 - 26517328
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||||    
T  26517281 agacacattaattacactgacaacttttcttaagaaatgtgaaaaatg 26517328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 27047241 - 27047288
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaa 194  Q
    |||||||||||||||||||||||||  |||||||||| ||| ||||||    
T  27047241 aatagacacattaattgcactaacagcttttcttaaggaatgtgaaaa 27047288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 28228217 - 28228174
Alignment:
Q  152 acacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||    
T  28228217 acacattaattgcactaacaactttttttaagaaatatcaaaaa 28228174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 182
Target Start/End: Original strand, 33412036 - 33412071
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaa 182  Q
    |||||||||||||||||||||||||| |||||||||    
T  33412036 aatagacacattaattgcactaacaatttttcttaa 33412071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 13084424 - 13084469
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||  ||| |||| ||||||||||||||||||||||    
T  13084424 agacacattaattatactgacaacttttcttaagaaatatgaaaaa 13084469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 31531491 - 31531536
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  31531491 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 31531536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 46048562 - 46048517
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  46048562 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 46048517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 46435796 - 46435841
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  46435796 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 46435841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 831429 - 831473
Alignment:
Q  153 cacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    |||||||||| || | |||| ||||||||||||||||||||||||    
T  831429 cacattaattacattgacaacttttcttaagaaatatgaaaaatg 831473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 11344601 - 11344553
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||| || || |||||||||||||| |||||||    
T  11344601 aatagacacattaattacaccaataacttttcttaagaaatgtgaaaaa 11344553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 11393965 - 11393917
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||||||||| |||| |||| |||| |||||||    
T  11393965 aatagacacattaattacactaacaactttttttaaaaaatgtgaaaaa 11393917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 27638140 - 27638188
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||| ||||||||| |||||| || |||||||||||||| |||||||    
T  27638140 aatagagacattaattacactaataacttttcttaagaaatgtgaaaaa 27638188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 37729092 - 37729140
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||||||  | |||||| |||||||||||||| |||||||    
T  37729092 aatagacacattaattatattaacaatttttcttaagaaatgtgaaaaa 37729140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 49000495 - 49000447
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||||||  ||||| ||||||||| |||| |||||||    
T  49000495 aatagacacattaattgcatcaacaacttttcttaaaaaatgtgaaaaa 49000447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 37491680 - 37491728
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  37491680 aatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaa 37491728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 31373759 - 31373809
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    |||||||||||||||||| ||||||| |||||||||||||| |||||||||    
T  31373759 aatagacacattaattgccctaacaatttttcttaagaaatgtgaaaaatg 31373809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 26201029 - 26201077
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||||    
T  26201029 aatagacacaataattgcactaataacttttcttaagaaatatgaaaaa 26201077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 29993019 - 29992979
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaat 187  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  29993019 aatagacacattaattgcactaacaacttttcttaagaaat 29992979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 48193659 - 48193609
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    |||||||||||||||| ||||||||| ||||||||| |||| |||||||||    
T  48193659 aatagacacattaattacactaacaatttttcttaaaaaatgtgaaaaatg 48193609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 27170056 - 27170007
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaat 196  Q
    |||||||| |||||||||||||||| ||| ||||||||||| ||||||||    
T  27170056 aatagacaaattaattgcactaacatgttgtcttaagaaatgtgaaaaat 27170007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 27213531 - 27213482
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaat 196  Q
    |||||||| |||| |||||||||||| |||||||||||||| ||||||||    
T  27213531 aatagacatattagttgcactaacaacttttcttaagaaatgtgaaaaat 27213482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 46783903 - 46783951
Alignment:
Q  148 atagacacattaattgcactaacaagttttcttaagaaatatgaaaaat 196  Q
    ||||||||||||||| |||||| || |||||||||||||| ||||||||    
T  46783903 atagacacattaatttcactaataacttttcttaagaaatgtgaaaaat 46783951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 21392954 - 21393005
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgt 198  Q
    |||||||||||||||||||||||||| ||||   || |||||||||||||||    
T  21392954 aatagacacattaattgcactaacaaatttttaaaaaaaatatgaaaaatgt 21393005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 27162968 - 27163011
Alignment:
Q  152 acacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||    
T  27162968 acacattaattgcactaacaactttacttaagaaatgtgaaaaa 27163011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 19236132 - 19236178
Alignment:
Q  151 gacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    |||||||||||| ||||||||| |||||||| ||||| |||||||||    
T  19236132 gacacattaattacactaacaacttttcttacgaaatgtgaaaaatg 19236178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 41672628 - 41672662
Alignment:
Q  147 aatagacacattaattgcactaacaagttttctta 181  Q
    |||||||||||||||| ||||||||||||||||||    
T  41672628 aatagacacattaattacactaacaagttttctta 41672662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 4089564 - 4089609
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  4089564 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 4089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 6376201 - 6376242
Alignment:
Q  154 acattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||| ||||||||| |||||||||||||| |||||||    
T  6376201 acattaattacactaacaatttttcttaagaaatgtgaaaaa 6376242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 10685126 - 10685081
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| | || ||||||||||||||||||||||    
T  10685126 agacacattaattacactgataacttttcttaagaaatatgaaaaa 10685081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 20123491 - 20123446
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  20123491 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 20123446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 33181440 - 33181407
Alignment:
Q  46 aaacataatcctaattaatattactaacttgtct 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  33181440 aaacatactcctaattaatattactaacttgtct 33181407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 35960422 - 35960373
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaat 196  Q
    ||||||||||||||||| |||||||| |||| ||||| ||| ||||||||    
T  35960422 aatagacacattaattgtactaacaattttttttaaggaatgtgaaaaat 35960373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 40211341 - 40211386
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| ||| ||||| ||||||||| ||||||||||||    
T  40211341 agacacattaattacacaaacaatttttcttaaaaaatatgaaaaa 40211386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 20124232 - 20124184
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||| ||||| ||||||||| |||| |||||||    
T  20124232 aatagacacattaattacaccaacaacttttcttaaaaaatgtgaaaaa 20124184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 26632890 - 26632842
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||| | ||||||||| ||||||||| |||| |||||||    
T  26632890 aatagacacattaactacactaacaatttttcttaaaaaatgtgaaaaa 26632842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 36
Target Start/End: Complemental strand, 29723644 - 29723616
Alignment:
Q  8 catttttaaattactagatgcatttatta 36  Q
    |||||||||||||||||||||||||||||    
T  29723644 catttttaaattactagatgcatttatta 29723616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 40740994 - 40740946
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||| ||||||| || |||||| |||||||||||||| |||||||    
T  40740994 aatagacatattaattacattaacaacttttcttaagaaatgtgaaaaa 40740946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 21012897 - 21012847
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    |||| ||||||||||||||||||||| |||||||||||||| |||||||||    
T  21012897 aataaacacattaattgcactaacaacttttcttaagaaatttgaaaaatg 21012847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 8384033 - 8384081
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  8384033 aataaacacattaattgcactaactatttttcttaagaaatatgaaaaa 8384081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 44424636 - 44424589
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  44424636 agacacattaattacactaacaacttttcttaagaaatgtgaaaaatg 44424589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 43709963 - 43709894
Alignment:
Q  147 aatagacacattaattgcactaacaagtttt-cttaagaaatatgaaaaatgttaaagggtgcatacatac 216  Q
    ||||||| |||||||||||||||||| |||| |||||||||| |||||||||  ||||||||| |||||||    
T  43709963 aatagacgcattaattgcactaacaatttttgcttaagaaatgtgaaaaatg-caaagggtgcttacatac 43709894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 2131801 - 2131744
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagg 204  Q
    ||||||||  |||||||||||||||| |||||||||||||| | |||||||| |||||    
T  2131801 aatagacatgttaattgcactaacaacttttcttaagaaatgtaaaaaatgtaaaagg 2131744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 2395846 - 2395806
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaat 187  Q
    |||||||||||||||| ||||||||| ||||||||||||||    
T  2395846 aatagacacattaattacactaacaacttttcttaagaaat 2395806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 17663668 - 17663620
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||| |||||||||| ||||||||| |||||||||||||| |||||||    
T  17663668 aataggcacattaattacactaacaacttttcttaagaaatgtgaaaaa 17663620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 20362027 - 20361979
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||| | ||||||||| |||||||||||||| |||||||    
T  20362027 aatagacacattaactacactaacaatttttcttaagaaatgtgaaaaa 20361979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 45214766 - 45214719
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||||    
T  45214766 agacacattaattacactgacaacttttcttaagaaatgtgaaaaatg 45214719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 183
Target Start/End: Complemental strand, 11071710 - 11071676
Alignment:
Q  149 tagacacattaattgcactaacaagttttcttaag 183  Q
    |||||||||||||||||||||||| ||||||||||    
T  11071710 tagacacattaattgcactaacaacttttcttaag 11071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 13477094 - 13477144
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    |||| ||| ||||||||||||||||| ||||||||| |||| |||||||||    
T  13477094 aataaacatattaattgcactaacaatttttcttaaaaaatgtgaaaaatg 13477144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 31644358 - 31644392
Alignment:
Q  2 taaactcatttttaaattactagatgcatttatta 36  Q
    |||||||||||| ||||||||||||||||||||||    
T  31644358 taaactcattttcaaattactagatgcatttatta 31644392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 15851572 - 15851527
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| |||||||||||||| |||||||    
T  15851572 agacacattaattacactcacaacttttcttaagaaatgtgaaaaa 15851527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 27297618 - 27297573
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| ||||||||  |||||||||||||| |||||||    
T  27297618 agacacattaattacactaacagtttttcttaagaaatgtgaaaaa 27297573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 37355077 - 37355032
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| ||| ||||| |||||||||||||| |||||||    
T  37355077 agacacattaattacacaaacaacttttcttaagaaatgtgaaaaa 37355032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 247704 - 247656
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||||||||| ||| ||||| |||| |||||||    
T  247704 aatagacacattaattacactaacaactttccttaaaaaatgtgaaaaa 247656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 2917158 - 2917198
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaat 187  Q
    ||||||||||||||||  |||||||| ||||||||||||||    
T  2917158 aatagacacattaattatactaacaacttttcttaagaaat 2917198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 3645367 - 3645319
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||| |  |||||||| |||||||||||||| |||||||    
T  3645367 aatagacacattaagtaaactaacaacttttcttaagaaatgtgaaaaa 3645319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 4398585 - 4398632
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||||||||| ||||||||| |||| |||||||    
T  4398585 aatagacacattaattacactaacaacttttcttaa-aaatgtgaaaaa 4398632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 6275628 - 6275680
Alignment:
Q  147 aatagacacattaattgcactaacaa-gttttcttaagaaatatgaaaaatgt 198  Q
    ||||||||||||||||||||||||||  |||| |||||||||  |||||||||    
T  6275628 aatagacacattaattgcactaacaatttttttttaagaaatgggaaaaatgt 6275680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 32677519 - 32677479
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaat 187  Q
    ||||||||||||||||| | |||||| ||||||||||||||    
T  32677519 aatagacacattaattgtattaacaatttttcttaagaaat 32677479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 36174853 - 36174901
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||| |||| |||||||||||| |||||||||||||  |||||||    
T  36174853 aatagacatattatttgcactaacaatttttcttaagaaacgtgaaaaa 36174901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 41865760 - 41865712
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||||||  || ||||| |||||||||||||| |||||||    
T  41865760 aatagacacattaattagaccaacaacttttcttaagaaatgtgaaaaa 41865712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 42250937 - 42250985
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||||| ||| ||||| |||||||| |||||||    
T  42250937 aatagacacattaattacactaccaacttttcataagaaatgtgaaaaa 42250985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 45150802 - 45150842
Alignment:
Q  152 acacattaattgcactaacaagttttcttaagaaatatgaa 192  Q
    ||||||||||||||| ||||| |||||||||||||| ||||    
T  45150802 acacattaattgcacaaacaacttttcttaagaaatgtgaa 45150842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 214660 - 214604
Alignment:
Q  149 tagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaaggg 205  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||| || ||||||    
T  214660 tagacacattaattacactaacaacttttcttaagaaatgtgaaaaaagtaaaaggg 214604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000009; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 31945974 - 31946022
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  31945974 aatagacacattaattacactaacaaattttcttaagaaatgtgaaaaa 31946022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 12514647 - 12514698
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgt 198  Q
    |||||||||||||||||||||||||| ||||||||| | || ||||||||||    
T  12514647 aatagacacattaattgcactaacaatttttcttaaaatatgtgaaaaatgt 12514698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 3729603 - 3729534
Alignment:
Q  10 tttttaaattactagatgcatttattannnnnnnnnaaacataatcctaattaatattactaacttgtct 79  Q
    ||||||||||| |||||||||||||||         ||||||| ||||||||||||||||||||||||||    
T  3729603 tttttaaattattagatgcatttattatttttttctaaacatactcctaattaatattactaacttgtct 3729534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 1763854 - 1763809
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||||    
T  1763854 agacacattaattacactgacaacttttcttaagaaatatgaaaaa 1763809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 240
Target Start/End: Original strand, 3888004 - 3888096
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatgttaaagggtgcatacatacgaggacgaatgaagtattttttaa 240  Q
    |||||||||||||| |||| |||||| |||||||||||||| |||||| ||  ||| ||||| ||||||| |||||| | | ||||| ||||||    
T  3888004 aatagacacattaactgcaataacaacttttcttaagaaatgtgaaaattg-caaaaggtgcttacatacaaggacggagggagtatattttaa 3888096  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 22410908 - 22410953
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||    
T  22410908 agacacattaattacactaacaacttttcttaagaaatgtgaaaaa 22410953  T

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Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 31780168 - 31780119
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaat 196  Q
    ||||||||||||||||||| || ||| |||| ||||||||||||||||||    
T  31780168 aatagacacattaattgcattatcaacttttattaagaaatatgaaaaat 31780119  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 19838975 - 19838927
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||| | ||||||||| |||||||||||||| |||||||    
T  19838975 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 19838927  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 15981835 - 15981789
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaat 196  Q
    ||||||||||||| ||| ||||| |||||||||||||| ||||||||    
T  15981835 agacacattaattacaccaacaacttttcttaagaaatgtgaaaaat 15981789  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 5895772 - 5895727
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    ||||||||||||| || |||||| |||||||||||||| |||||||    
T  5895772 agacacattaattacattaacaacttttcttaagaaatgtgaaaaa 5895727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 11302896 - 11302851
Alignment:
Q  150 agacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||  |||||||| |||||||||||||| |||||||    
T  11302896 agacacattaattatactaacaacttttcttaagaaatgtgaaaaa 11302851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 3729433 - 3729393
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaat 187  Q
    |||||||||||||||| ||| ||||| ||||||||||||||    
T  3729433 aatagacacattaattacaccaacaatttttcttaagaaat 3729393  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 99878 - 99928
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaatg 197  Q
    ||||||||||| | |||||||||||| ||||||||| ||||||||||||||    
T  99878 aatagacacataagttgcactaacaacttttcttaacaaatatgaaaaatg 99928  T

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Target: scaffold1091 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 1974 - 2022
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaa 195  Q
    |||||||||||||||| ||||||||| || ||||||||||| |||||||    
T  1974 aatagacacattaattacactaacaacttatcttaagaaatgtgaaaaa 2022  T

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Target: scaffold0176 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 19576 - 19527
Alignment:
Q  147 aatagacacattaattgcactaacaagttttcttaagaaatatgaaaaat 196  Q
    |||||||| |||||||||||| |||| ||||| |||||||| ||||||||    
T  19576 aatagacatattaattgcactgacaacttttcgtaagaaatgtgaaaaat 19527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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