View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13409_low_15 (Length: 297)
Name: NF13409_low_15
Description: NF13409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13409_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 16 - 278
Target Start/End: Complemental strand, 32991849 - 32991585
Alignment:
| Q |
16 |
ataatactaataccataataagacaatcgaacataacacagtagatata--aacctgaagagacttaagaaagtgcatgttttcttccacttcaggttca |
113 |
Q |
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| T |
32991849 |
ataatattaataccataataagaaaatagaacataacacagtagatatatgaacctgaagagacttaagaaagtgcatgttttcttccacttcaggttca |
32991750 |
T |
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| Q |
114 |
gcttctgatttttcaaaggaaagtgacttaaaattcacatccatgttactgatttagaggaagaaatcaacaaagcttgaagttatgaaaacaaaacgca |
213 |
Q |
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| T |
32991749 |
gcttctgatttttcaaaggaaagtgacttaaaattcacatccatgttactgatttagaggaagaaatcaacaaagcttgaagttatgaaaacaaaacgca |
32991650 |
T |
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| Q |
214 |
gcaatgcttttaaaagcaacaaagataagggattatgtcacatgtggtgtgtttatgtttgtgac |
278 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32991649 |
gcaatgcttttaaaagcaacaaagataagggattatgtcacatgtggtgtgtttatgtttgtgac |
32991585 |
T |
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