View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1341-Insertion-5 (Length: 572)

Name: NF1341-Insertion-5
Description: NF1341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1341-Insertion-5
NF1341-Insertion-5
[»] chr5 (14 HSPs)
chr5 (8-347)||(16470134-16470483)
chr5 (376-550)||(16469955-16470129)
chr5 (37-136)||(24924293-24924392)
chr5 (49-136)||(22010851-22010937)
chr5 (49-136)||(36196933-36197019)
chr5 (49-136)||(25769505-25769591)
chr5 (49-111)||(22969736-22969798)
chr5 (40-134)||(16075308-16075399)
chr5 (37-104)||(23779414-23779480)
chr5 (37-104)||(23866367-23866433)
chr5 (152-184)||(22010968-22011000)
chr5 (40-104)||(17810998-17811062)
chr5 (136-184)||(25369036-25369084)
chr5 (132-184)||(25769602-25769654)
[»] chr2 (18 HSPs)
chr2 (37-136)||(27598039-27598138)
chr2 (40-226)||(13821692-13821895)
chr2 (39-226)||(25576435-25576636)
chr2 (50-136)||(23780429-23780514)
chr2 (37-136)||(22801344-22801442)
chr2 (40-136)||(20478556-20478652)
chr2 (37-136)||(27861261-27861359)
chr2 (49-136)||(28144241-28144327)
chr2 (142-226)||(27597933-27598015)
chr2 (49-136)||(28141555-28141641)
chr2 (136-226)||(27190200-27190290)
chr2 (136-226)||(27840014-27840104)
chr2 (40-134)||(25568756-25568847)
chr2 (40-134)||(11323467-11323558)
chr2 (49-136)||(27190307-27190393)
chr2 (49-136)||(27840121-27840207)
chr2 (39-108)||(20489611-20489682)
chr2 (132-184)||(28144337-28144389)
[»] scaffold0031 (2 HSPs)
scaffold0031 (37-136)||(38085-38184)
scaffold0031 (142-226)||(38209-38291)
[»] chr1 (9 HSPs)
chr1 (37-136)||(25401485-25401584)
chr1 (37-134)||(10159085-10159182)
chr1 (49-133)||(18523228-18523312)
chr1 (131-226)||(22533879-22533974)
chr1 (132-226)||(18523120-18523214)
chr1 (142-184)||(25401608-25401650)
chr1 (69-112)||(20886344-20886387)
chr1 (136-194)||(20886427-20886485)
chr1 (37-111)||(21291299-21291372)
[»] chr8 (16 HSPs)
chr8 (37-136)||(23817903-23818004)
chr8 (38-136)||(23242058-23242155)
chr8 (40-137)||(9006679-9006776)
chr8 (40-135)||(921428-921523)
chr8 (64-196)||(21301526-21301672)
chr8 (37-224)||(17983106-17983308)
chr8 (71-134)||(15927747-15927809)
chr8 (132-226)||(12149458-12149552)
chr8 (37-134)||(22263735-22263829)
chr8 (143-226)||(23818027-23818108)
chr8 (141-188)||(9006796-9006843)
chr8 (132-195)||(23242166-23242229)
chr8 (49-136)||(24093488-24093573)
chr8 (69-134)||(22814918-22814981)
chr8 (132-226)||(24093383-24093477)
chr8 (136-184)||(22815000-22815048)
[»] chr7 (22 HSPs)
chr7 (39-127)||(21668548-21668636)
chr7 (37-136)||(18098549-18098648)
chr7 (35-136)||(17881360-17881460)
chr7 (40-136)||(12330711-12330807)
chr7 (57-136)||(9560718-9560797)
chr7 (37-136)||(17115185-17115283)
chr7 (39-114)||(20923114-20923189)
chr7 (40-134)||(15124890-15124981)
chr7 (37-102)||(7965587-7965652)
chr7 (126-226)||(14942871-14942971)
chr7 (126-226)||(15370464-15370564)
chr7 (40-134)||(17132286-17132376)
chr7 (152-226)||(9560613-9560686)
chr7 (126-171)||(18098497-18098542)
chr7 (132-226)||(10310180-10310275)
chr7 (37-111)||(7404794-7404867)
chr7 (132-194)||(12330819-12330881)
chr7 (70-111)||(14960946-14960987)
chr7 (70-111)||(15390418-15390459)
chr7 (136-184)||(14961029-14961077)
chr7 (136-184)||(15390501-15390549)
chr7 (142-222)||(17132401-17132480)
[»] chr6 (17 HSPs)
chr6 (40-136)||(31137589-31137685)
chr6 (46-136)||(17863525-17863614)
chr6 (40-137)||(25945595-25945692)
chr6 (39-117)||(15966268-15966348)
chr6 (36-136)||(21375824-21375923)
chr6 (37-134)||(18376740-18376834)
chr6 (81-136)||(20194588-20194642)
chr6 (81-136)||(22088611-22088665)
chr6 (40-134)||(34500977-34501068)
chr6 (69-134)||(23010752-23010815)
chr6 (136-224)||(21375940-21376027)
chr6 (69-136)||(12410330-12410396)
chr6 (136-226)||(7391275-7391365)
chr6 (77-134)||(23591042-23591097)
chr6 (71-136)||(18560541-18560605)
chr6 (71-134)||(20228710-20228771)
chr6 (71-134)||(22122694-22122755)
[»] chr4 (6 HSPs)
chr4 (37-226)||(12810140-12810344)
chr4 (49-136)||(10070346-10070432)
chr4 (49-136)||(14633012-14633098)
chr4 (49-136)||(11889748-11889834)
chr4 (141-226)||(11889642-11889728)
chr4 (141-226)||(14632907-14632992)
[»] chr3 (6 HSPs)
chr3 (37-135)||(22928244-22928341)
chr3 (40-136)||(16226954-16227049)
chr3 (57-136)||(16224355-16224433)
chr3 (49-136)||(13908478-13908564)
chr3 (240-345)||(2178659-2178764)
chr3 (141-225)||(16224251-16224335)
[»] scaffold0009 (3 HSPs)
scaffold0009 (39-136)||(50127-50223)
scaffold0009 (39-226)||(222396-222596)
scaffold0009 (136-226)||(50241-50331)
[»] scaffold0004 (2 HSPs)
scaffold0004 (36-133)||(376736-376832)
scaffold0004 (40-134)||(370102-370192)
[»] scaffold0338 (1 HSPs)
scaffold0338 (40-136)||(16982-17078)
[»] scaffold0005 (2 HSPs)
scaffold0005 (49-136)||(184194-184280)
scaffold0005 (132-226)||(184291-184385)
[»] scaffold0170 (1 HSPs)
scaffold0170 (150-226)||(1156-1231)
[»] scaffold0210 (2 HSPs)
scaffold0210 (37-136)||(18011-18109)
scaffold0210 (37-136)||(25903-26001)
[»] scaffold0099 (1 HSPs)
scaffold0099 (37-124)||(37492-37581)
[»] scaffold0056 (2 HSPs)
scaffold0056 (40-136)||(20754-20849)
scaffold0056 (75-134)||(54757-54814)
[»] scaffold0054 (1 HSPs)
scaffold0054 (37-134)||(77200-77294)
[»] scaffold0194 (1 HSPs)
scaffold0194 (42-111)||(31541-31609)


Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 8 - 347
Target Start/End: Complemental strand, 16470483 - 16470134
Alignment:
Q  8 cctttaggagggaccaaacttaaaa-gtatatttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagaga 106  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   || |||||| | ||||||||||||||||||||||||||||    
T  16470483 cctttaggagggaccaaacttaaaaagtatatttgtttgcctgtgtttttggcaaac---gaactagttcttattattacaagcgagaccgaactagaga 16470387  T
Q  107 tctcaggatcatgttgtgcaaaggttttga-----------------aaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaa 189  Q
    |||||| ||||||||||| |||||||||||                 |||||||||||||||||||||||||||||||||||| |     ||||||||||    
T  16470386 tctcagaatcatgttgtgtaaaggttttgattgaaaaaaggttttgaaaacggccacgagaagcactcaggttacttagagggta-----ggtttagaaa 16470292  T
Q  190 caaaaaatgcaccatctcttgacaggtttgagattgctttcaagttagaagtttatgaatggctacaagattaatgttcacattgtcagatgattgggca 289  Q
    |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||    
T  16470291 caaaaaatacaccatctctcgacaggtttgagattgctttcaaattagaagtttatgaacggctacaagattaatgttcacgttgtcagatgattgagca 16470192  T
Q  290 caatgttacggcttgtcgttggctacaccctaagcaggttgttgaaaaaattgatcgc 347  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  16470191 caatgttacggcttgtcgttggctacaccctgagcaggttgttgaaaaagttgatcgc 16470134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 376 - 550
Target Start/End: Complemental strand, 16470129 - 16469955
Alignment:
Q  376 ctactcagaaatatgtcgaaaaacataaccaaatgggattgggccctcgaaagcatttgaagtgcctcatattactaatgtaataccagttatatctcat 475  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  16470129 ctactcagaaatatgtcgaaaaacataaccaaatgggattgggccctcgaaagcatttgaagtacctcatattactaatataataccagttatatctcat 16470030  T
Q  476 gcagaacatgtcgttcctagtgcagatcaagatgttaaaatcatcacacctatagaaccatcattgcaacaaagt 550  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16470029 gcagaacatgtcgtccctagtgcagatcaagatgttacaatcatcacacctatagaaccatcattgcaacaaagt 16469955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 24924392 - 24924293
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||||||||| |||||| ||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  24924392 atttgtttgcctatgttttcggcaaactacgggttagttctgattattacaagcgaaaccgaactagagatctcaggagcatgttgtgcaaaagttttga 24924293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 22010851 - 22010937
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  22010851 gtgttttcgggaaactacgggctagttttgattattacaagcgagaccgaactagaaatctcagga-catgttgtgcaaaggttttga 22010937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 36197019 - 36196933
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| |||| |||||| ||||||| ||||||||||||||| |||||||||||| ||| ||||| |||||||||||||||||||||    
T  36197019 gtgttttcggcatactacgggctagttctgattattacaagcgggaccgaactagaaatcacagga-catgttgtgcaaaggttttga 36196933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 25769505 - 25769591
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| | ||||||||| ||||||| ||||||||||||| | |||||||||||| ||| ||||| |||||||| ||||||||||||    
T  25769505 gtgttttcgacaaactacgggctagttctgattattacaagagggaccgaactagaaatcccagga-catgttgtccaaaggttttga 25769591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 22969798 - 22969736
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctca 111  Q
    |||||||||||||| |||| ||||||| ||| |||||||||||||||||||||||| ||||||    
T  22969798 gtgtttttggcaaattacgggctagttctgactattacaagcgagaccgaactagatatctca 22969736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 16075308 - 16075399
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    |||||||||||| |||||||||||   | ||||||| |||||||||||||||| ||| ||||||| |||||| || |  ||||||||||||||||    
T  16075308 tgtttgcctgtggttttggcaaacgggg-gctagttctgattattacaagcgaaaccaaactagaaatctcaagacc--gttgtgcaaaggtttt 16075399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 23779480 - 23779414
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactaga 104  Q
    ||||||||||||||| |||||||||||   | ||||||| |||||||||||||||||| |||||||||    
T  23779480 atttgtttgcctgtgattttggcaaacagag-gctagttctgattattacaagcgagatcgaactaga 23779414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 23866433 - 23866367
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactaga 104  Q
    ||||||||||||||| |||||||||||   | ||||||| |||||||||||||||||| |||||||||    
T  23866433 atttgtttgcctgtgattttggcaaacagag-gctagttctgattattacaagcgagatcgaactaga 23866367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 22010968 - 22011000
Alignment:
Q  152 gcactcaggttacttagagggcaggacgggttt 184  Q
    |||||||||||||||||||||||||||||||||    
T  22010968 gcactcaggttacttagagggcaggacgggttt 22011000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 17811062 - 17810998
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactaga 104  Q
    ||||| || |||||||||  |||||||| ||||  | |||||||||||||||||| |||||||||    
T  17811062 tgtttaccagtgtttttgataaactacgggctaactctgattattacaagcgagatcgaactaga 17810998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 25369036 - 25369084
Alignment:
Q  136 aaaacggccacgagaagcactcaggttacttagagggcaggacgggttt 184  Q
    ||||||||||||| | ||||| ||||| ||||||| |||||||||||||    
T  25369036 aaaacggccacgaaatgcacttaggttgcttagagagcaggacgggttt 25369084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 25769602 - 25769654
Alignment:
Q  132 tttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggttt 184  Q
    |||||||| |||||||| | |||| |||||||||||||| ||| |||||||||    
T  25769602 tttgaaaaaggccacgaaatgcacgcaggttacttagagagcaagacgggttt 25769654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 27598138 - 27598039
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  27598138 atttgtttgcctgtgtttttggcaaactacaggctagttctgattattacaagtgagaccgaactagagatctcaggagcatgttgtgcaaaggttttga 27598039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 13821692 - 13821895
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgc-------------- 125  Q
    ||||||||| |||||| || |||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||                  
T  13821692 tgtttgcctatgttttcggaaaactacgggctagttctgattattacaagcgagaccgaactagagatctcaggagcatgttgtgcaaaaggttttgatc 13821791  T
Q  126 ----aaaggttttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgag 221  Q
        |||||||||||||| || ||||||| ||||||||||||||||||| || ||||||| |||||||||||||| |||   ||||| |||| |||||||    
T  13821792 gaaaaaaggttttgaaaaaggtcacgagatgcactcaggttacttagagagcgggacggggttagaaacaaaaaaggcattgtctctcgaca-gtttgag 13821890  T
Q  222 attgc 226  Q
    |||||    
T  13821891 attgc 13821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 25576435 - 25576636
Alignment:
Q  39 ttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggt------- 131  Q
    |||||| || |||||||  |||||||||| |||| || |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||           
T  25576435 ttgtttaccggtgttttctgcaaactacgggctaattctgattattacaagcgagaccgaactagaaatctcagga-catgctgtgcaaaggttttgatc 25576533  T
Q  132 --------tttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagat 223  Q
            |||||||| |||||||||| ||||||||||||||||||| ||||||||||||| |||| |||||  ||||  ||| | ||||||||||||||    
T  25576534 gaaaacggtttgaaaaaggccacgagatgcactcaggttacttagagagcaggacgggttttgaaataaaaagggcactgtctttcgacaggtttgagat 25576633  T
Q  224 tgc 226  Q
    |||    
T  25576634 tgc 25576636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 23780429 - 23780514
Alignment:
Q  50 tgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||| ||||||||||| ||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  23780429 tgttttcggcaaactacgggctagttctgattattacaagcgagaccgaactggaaatctcagga-catgttgtgcaaaggttttga 23780514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 22801344 - 22801442
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||||| |||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||| |||| |||| |||| ||| |||||||||||||||||    
T  22801344 atttgtttacctgtgttttcggcaaactacgggctagttctgattattacaagtgagaccgaattagaaatcttagga-catattgtgcaaaggttttga 22801442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 20478652 - 20478556
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||||| ||||||| ||||||||||  | ||||| ||||||||||||   |||||||||||||||||| |||| |||||||||||||||||||||    
T  20478652 tgtttgccagtgttttaggcaaactacaggttagttctgattattacaattcagaccgaactagagatcttaggagcatgttgtgcaaaggttttga 20478556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 27861359 - 27861261
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||||  ||||||||| ||||||||||  ||||||| |||||||| |||||| |||||||||||| ||| ||||| |||||||||||||||||||||    
T  27861359 atttgtttaactgtgttttcggcaaactacaggctagttctgattattccaagcgggaccgaactagaaatcccagga-catgttgtgcaaaggttttga 27861261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 28144241 - 28144327
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||||||| | | |  ||| || |||||||||||||||||||||    
T  28144241 gtgttttcggcaaactacgagttagttctgattattacaagcgagaccgaaccaaaaaattcaaga-catgttgtgcaaaggttttga 28144327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 27598015 - 27597933
Alignment:
Q  142 gccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    ||||||||| ||||||||||||||||||| |||||||||||||  ||||  |||| ||||| ||||| || ||||||||||||||    
T  27598015 gccacgagatgcactcaggttacttagagagcaggacgggtttctaaac--aaaaggcaccgtctctcgataggtttgagattgc 27597933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 28141641 - 28141555
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| ||||||||||||| ||||| ||||||||||||| | || ||||| | | || |||||| |||||||||||||||||||||    
T  28141641 gtgttttcggcaaactacgagttagttctgattattacaagtgggatcgaaccaaaaatttcagga-catgttgtgcaaaggttttga 28141555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 226
Target Start/End: Complemental strand, 27190290 - 27190200
Alignment:
Q  136 aaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||| |||||||||| ||||||||||||| ||||| |||||||| |||| |||| |||||  ||||  ||||| ||||| |||||||||||    
T  27190290 aaaagggccacgagatgcactcaggttacatagagagcaggacgagttttgaaataaaaagggcactgtctctcgacagatttgagattgc 27190200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 226
Target Start/End: Complemental strand, 27840104 - 27840014
Alignment:
Q  136 aaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||| |||||||||| ||||||||||||| ||||| |||||||| |||| |||| |||||  ||||  ||||| ||||| |||||||||||    
T  27840104 aaaagggccacgagatgcactcaggttacatagagagcaggacgagttttgaaataaaaagggcactgtctctcgacagatttgagattgc 27840014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 25568847 - 25568756
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    |||||||||||| |||||||||||   | ||||||| |||||||||||| ||||| ||||||||| |||||| || |  ||||||||||||||||    
T  25568847 tgtttgcctgtgattttggcaaacgggg-gctagttctgattattacaatcgagatcgaactagaaatctcaagacc--gttgtgcaaaggtttt 25568756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 11323467 - 11323558
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    |||||||||||| ||||||||||| | | ||||| | |||||||||||||  ||| ||||||||| |||||| ||  ||| ||||||||||||||    
T  11323467 tgtttgcctgtgattttggcaaacga-gggctagctctgattattacaagttagatcgaactagaaatctcaaga--atgctgtgcaaaggtttt 11323558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 27190393 - 27190307
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| ||||||||| | |||||||  |||||| ||  |||||| ||||||||| |||| ||||| |||||||||||| |||||||    
T  27190393 gtgttttcggcaaactatgggctagttcagattataacgtgcgagatcgaactagaaatcttaggat-atgttgtgcaaatgttttga 27190307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 27840207 - 27840121
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| ||||||||| | |||||||  |||||| ||  |||||| ||||||||| |||| ||||| |||||||||||| |||||||    
T  27840207 gtgttttcggcaaactatgggctagttcagattataacgtgcgagatcgaactagaaatcttaggat-atgttgtgcaaatgttttga 27840121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 20489682 - 20489611
Alignment:
Q  39 ttgtttgcctgtgtttttggcaaac--tacgagctagttttgattattacaagcgagaccgaactagagatc 108  Q
    ||||||||| |||||||||| ||||  |||| | |||||||||||||||||||  ||||| ||| |||||||    
T  20489682 ttgtttgccggtgtttttggtaaacaatacgggatagttttgattattacaagaaagaccaaaccagagatc 20489611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 28144337 - 28144389
Alignment:
Q  132 tttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggttt 184  Q
    |||||||| |||||||| | ||||||||||||||||||| ||| ||| |||||    
T  28144337 tttgaaaaaggccacgaaatgcactcaggttacttagagagcaagacaggttt 28144389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 38085 - 38184
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||||||||||| ||| ||||||||||| ||||||| |||||||||||| ||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  38085 atttgtttgcctgtgctttcggcaaactacgggctagttctgattattacaaacgagaccgaactagaaatctcaggagcatgttgtgcaaagattttga 38184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 38209 - 38291
Alignment:
Q  142 gccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    ||||||||| ||||||||||||||||||| |||||||||||||  ||  | |||| ||||  ||||| |||||||||||||||||    
T  38209 gccacgagatgcactcaggttacttagagagcaggacgggtttctaa--agaaaaggcactgtctctcgacaggtttgagattgc 38291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 4e-30; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 25401485 - 25401584
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||||||||| |||||| || |||||||| ||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  25401485 atttgtttgcctatgttttcggaaaactacgggctagttctgattattacaagcgataccgaactacagatctcaggagcatgttgtgcaaaggttttga 25401584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 10159182 - 10159085
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    ||||||||| ||||||||||  ||||| ||| ||||||| | ||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  10159182 atttgtttgtctgtgtttttaacaaaccacgggctagttctaattcttacaagcgagaccgaactagagatctcaggagtatgttgtgcaaaggtttt 10159085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 18523312 - 18523228
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttt 133  Q
    ||||||| ||||||||||  |||| || |||||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||    
T  18523312 gtgttttcggcaaactacaggctaattctgattattacaagcgagatcgaactagaaatcttaggagcatgttgtgcaaaggttt 18523228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 22533974 - 22533879
Alignment:
Q  131 ttttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    ||||||||| || ||||||| ||||||||||||||||||| ||||||||  ||| |||| |||||  ||||  ||||| |||||||||||||||||    
T  22533974 ttttgaaaaaggtcacgagatgcactcaggttacttagagagcaggacgaattttgaaataaaaatggcactgtctctcgacaggtttgagattgc 22533879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 18523214 - 18523120
Alignment:
Q  132 tttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||||||| ||| |||||| ||||| || |||||||||| ||||||||||||| |||  ||| |  ||||  ||| |||||||||||||||||||    
T  18523214 tttgaaaaaggcgacgagatgcacttagtttacttagagagcaggacgggttttgaattaaagagggcactgtcttttgacaggtttgagattgc 18523120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 25401608 - 25401650
Alignment:
Q  142 gccacgagaagcactcaggttacttagagggcaggacgggttt 184  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  25401608 gccacgagatgcactcaggttacttagagagcaggacgggttt 25401650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 20886344 - 20886387
Alignment:
Q  69 gctagttttgattattacaagcgagaccgaactagagatctcag 112  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||    
T  20886344 gctagttctgattgttacaagtgagaccgaactagagatctcag 20886387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 20886427 - 20886485
Alignment:
Q  136 aaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaa 194  Q
    |||| |||||||||| ||| ||||||| ||||||||||| ||||||| |||||| ||||    
T  20886427 aaaagggccacgagatgcattcaggttgcttagagggcaagacgggtatagaaataaaa 20886485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 21291372 - 21291299
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctca 111  Q
    ||||||||||||||| |||||| ||||   | ||||||| |||||||||||| ||||| ||||||||| ||||||    
T  21291372 atttgtttgcctgtgattttggaaaacgtgg-gctagttctgattattacaatcgagatcgaactagaaatctca 21291299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 23817903 - 23818004
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcg--agaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    |||| ||||| |||||||| ||||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  23817903 atttatttgcatgtgttttcggcaaactacgggctagttctgattattacaagcgcgagaccgaactagagatctcaggagcatgttgtgcaaaggtttt 23818002  T
Q  135 ga 136  Q
    ||    
T  23818003 ga 23818004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 23242058 - 23242155
Alignment:
Q  38 tttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| || ||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  23242058 tttgtttaccggtgtttttggcaaactacgggcttgttctgattattacaagcaagaccgaactagaaatctcagga-catgttgtgcaaaggttttga 23242155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 9006679 - 9006776
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttgaa 137  Q
    ||||||||| | |||| ||| ||||||||| ||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  9006679 tgtttgcctctattttcggctaactacgagttagttctgattattacaagcgagactgaactagagatctcagaagcatgttgtgcaaaggttttgaa 9006776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 921523 - 921428
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttg 135  Q
    ||||||| ||||||||  |||||||||| ||||||| |||||||||||||| |||||||| |||||||||| ||| ||||||||||||||||||||    
T  921523 tgtttgcatgtgttttcagcaaactacgggctagttctgattattacaagcaagaccgaagtagagatctcgggagcatgttgtgcaaaggttttg 921428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 64 - 196
Target Start/End: Complemental strand, 21301672 - 21301526
Alignment:
Q  64 tacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggt---------------tttgaaaacggccacga 148  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| |||||||               |||||||| ||||||||    
T  21301672 tacgggctagttctgattattacaagcgagaccgaactagaaatctcagga-catgttgtacaaaggttttgataaaaaacggtttgaaaaaggccacga 21301574  T
Q  149 gaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaa 196  Q
    || ||||||||||||||||||| ||||||||||||| |||| ||||||    
T  21301573 gatgcactcaggttacttagagagcaggacgggttttgaaataaaaaa 21301526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 224
Target Start/End: Original strand, 17983106 - 17983308
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggt----- 131  Q
    |||||||| | || ||||| ||||||||| | ||||||| |||| ||||||| |||||| ||| |||| ||||||||| ||||||||||||||||         
T  17983106 atttgtttacttgggttttcggcaaactatgggctagttatgataattacaaacgagactgaagtagaaatctcagga-catgttgtgcaaaggttttga 17983204  T
Q  132 ----------tttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaa-tgcaccatctcttgacaggtttga 220  Q
              |||||||| |||||||||| ||||||| ||||||||||| |||||| | |||| |||| ||||||  ||||| ||||| |||||||||||    
T  17983205 tcgaaaacggtttgaaaaaggccacgagatgcactcaagttacttagagagcaggatgagttttgaaataaaaaagggcaccgtctctcgacaggtttga 17983304  T
Q  221 gatt 224  Q
    ||||    
T  17983305 gatt 17983308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 71 - 134
Target Start/End: Complemental strand, 15927809 - 15927747
Alignment:
Q  71 tagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    ||||| || ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  15927809 tagttctgtttattacaagcgagaccgaactagagatctcagga-cacgttgtgcaaaggtttt 15927747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 12149552 - 12149458
Alignment:
Q  132 tttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||||||| |||||||||| ||||||||||||||||||| ||| |||||||||  ||| |||||  |||   ||||| |||||||||||||||||    
T  12149552 tttgaaaaaggccacgagatgcactcaggttacttagagagcaagacgggtttttaaataaaaagggcattgtctctcgacaggtttgagattgc 12149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 22263735 - 22263829
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    ||||||||||||||| ||||||||||| | | ||||||| |||| |||||||||||||||||| |||| |||||| ||   |||||||||||||||||    
T  22263735 atttgtttgcctgtgattttggcaaacgatg-gctagttctgatcattacaagcgagaccgaattagaaatctcaaga--ctgttgtgcaaaggtttt 22263829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 23818027 - 23818108
Alignment:
Q  143 ccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||||||| ||||||||||||||||||| |||||||| ||||  ||||  |||| ||||  ||||| |||||||||||||||||    
T  23818027 ccacgagatgcactcaggttacttagagagcaggacgagtttgtaaac--aaaaggcactgtctctcgacaggtttgagattgc 23818108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 9006796 - 9006843
Alignment:
Q  141 ggccacgagaagcactcaggttacttagagggcaggacgggtttagaa 188  Q
    |||||||||| ||||||||||| ||||||| |||||||| ||||||||    
T  9006796 ggccacgagatgcactcaggttgcttagagagcaggacgagtttagaa 9006843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 23242166 - 23242229
Alignment:
Q  132 tttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaa 195  Q
    |||||||| |||| ||||| |||||||||||||||| || |||||||| |||| |||| |||||    
T  23242166 tttgaaaaaggcctcgagatgcactcaggttacttaaagagcaggacgagttttgaaataaaaa 23242229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 24093573 - 24093488
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||||||  |||||||| | ||||| |||||||||| |||||| |||||||| | |||||| || ||||||||| |||||||||||    
T  24093573 gtgtttttgaaaaactacgggttagttctgattattac-agcgaggccgaactataaatctcaaga-catgttgtgaaaaggttttga 24093488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 22814918 - 22814981
Alignment:
Q  69 gctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    ||||||| ||||||||||||||||||  |||||||| |||||| || |  ||||||||||||||||    
T  22814918 gctagttctgattattacaagcgagattgaactagaaatctcaagacc--gttgtgcaaaggtttt 22814981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 24093477 - 24093383
Alignment:
Q  132 tttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||||||| || ||||| | |||||||||||||||||||  ||||||| ||||   |  |||||  |||| |||||| |||||||||||||||||    
T  24093477 tttgaaaaaggtcacgaaatgcactcaggttacttagagatcaggacgagttttagagtaaaaagggcactatctctcgacaggtttgagattgc 24093383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 22815000 - 22815048
Alignment:
Q  136 aaaacggccacgagaagcactcaggttacttagagggcaggacgggttt 184  Q
    |||| |||||||| | ||||||||||| ||||||| |||||||||||||    
T  22815000 aaaaaggccacgaaatgcactcaggttgcttagagagcaggacgggttt 22815048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 21668548 - 21668636
Alignment:
Q  39 ttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaa 127  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  21668548 ttgtttgcctgtgtttttggcaaactacatgctagttctgattattacaagcgagaccaaactagagatctcatgagcatgttgtgcaa 21668636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 18098648 - 18098549
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||| |||||||  ||||||||||||||||| | ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||    
T  18098648 atttttttgcctacgtttttggcaaactacgggttagttatgattattacaagcgagactgaactagagatctcaggagcatgttgtgcataggttttga 18098549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 35 - 136
Target Start/End: Complemental strand, 17881460 - 17881360
Alignment:
Q  35 atatttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    |||||||||| |  ||||||| || |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  17881460 atatttgtttactggtgttttcggtaaactacgggctagttatgattattacaagcgagaccgaactagaaatctcagga-catgttgtgcaaaggtttt 17881362  T
Q  135 ga 136  Q
    ||    
T  17881361 ga 17881360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 12330711 - 12330807
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||||||||||||  | |||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  12330711 tgtttgcctgtgttttcagaaaactacgggctagttctgattatcacaagcgagaccgaactagagatcttaggagcatgttgtgcaaagattttga 12330807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 57 - 136
Target Start/End: Complemental strand, 9560797 - 9560718
Alignment:
Q  57 ggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  9560797 ggcaaactacaagctagttctgattatcacaagcgagaccgaactagagatctcaagggcatgttgtgcaaaggttttga 9560718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 17115283 - 17115185
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||||| || ||||||| ||||||||||| ||||||| |||||||||||||||  |||||| |||| ||| |||| || |||||||||||||||||||    
T  17115283 atttgtttaccggtgttttcggcaaactacgggctagttctgattattacaagcggaaccgaaatagaaatcccagg-tcttgttgtgcaaaggttttga 17115185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 20923114 - 20923189
Alignment:
Q  39 ttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcagga 114  Q
    |||||| || ||||||| || |||||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  20923114 ttgtttaccggtgttttcggaaaactacgagctagttctgattattacaagcgagaccgaactaaaaatctcagga 20923189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 15124890 - 15124981
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    |||||||||||| |||||||||| |  | ||||||| |||||||||||||||||| ||||||||| |||||| || |  ||||||||||||||||    
T  15124890 tgtttgcctgtgattttggcaaa-tgggggctagttctgattattacaagcgagatcgaactagaaatctcaagacc--gttgtgcaaaggtttt 15124981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 7965587 - 7965652
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaacta 102  Q
    |||||||| || ||||||| ||||||||||| |||||||  ||||||||||| |||||||||||||    
T  7965587 atttgtttaccagtgttttcggcaaactacgggctagttcagattattacaaacgagaccgaacta 7965652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 14942871 - 14942971
Alignment:
Q  126 aaaggttttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattg 225  Q
    ||||||||  |||| ||||| || ||||||||||| |||||| || ||||||| ||||| |||| |||||  |||| || ||| ||||||||||||||||    
T  14942871 aaaggtttaaaaaagggccatgataagcactcaggctacttaaagagcaggacaggttttgaaataaaaagggcactatgtctcgacaggtttgagattg 14942970  T
Q  226 c 226  Q
    |    
T  14942971 c 14942971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 15370464 - 15370564
Alignment:
Q  126 aaaggttttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattg 225  Q
    ||||||||  |||| ||||| || ||||||||||| |||||| || ||||||| ||||| |||| |||||  |||| || ||| ||||||||||||||||    
T  15370464 aaaggtttaaaaaagggccatgataagcactcaggctacttaaagagcaggacaggttttgaaataaaaagggcactatgtctcgacaggtttgagattg 15370563  T
Q  226 c 226  Q
    |    
T  15370564 c 15370564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 17132286 - 17132376
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    |||||||||||| |||||||||||   | ||||||||||||||||||||||| || | ||||||| |||||| || |  ||||||||||||||||    
T  17132286 tgtttgcctgtgattttggcaaacg--gggctagttttgattattacaagcgcgaactaactagaaatctcaagacc--gttgtgcaaaggtttt 17132376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 9560686 - 9560613
Alignment:
Q  152 gcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||||||||||||||||||||||||||   |||||||||| |||| ||||  ||||| || ||||||||||||||    
T  9560686 gcactcaggttacttagagggcaggacaactttagaaaca-aaaaggcactgtctctcgataggtttgagattgc 9560613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 18098542 - 18098497
Alignment:
Q  126 aaaggttttgaaaacggccacgagaagcactcaggttacttagagg 171  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||    
T  18098542 aaaggttttgaaaatggccacaagatgcactcaggttacttagagg 18098497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 10310275 - 10310180
Alignment:
Q  132 tttgaaaacggccacgagaagcactcaggttacttagagggcaggac-gggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||||||| |||||||| | ||||||||||||||||||| |||| || || ||||||   |||||| ||||  ||||| ||||||||||| |||||    
T  10310275 tttgaaaaaggccacgaaatgcactcaggttacttagagagcagaacaggttttagagtaaaaaaaggcacggtctctcgacaggtttgaaattgc 10310180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 7404867 - 7404794
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctca 111  Q
    |||||||| | |||| ||||||||||| | | ||||||| ||||||||||||  |||||||||||||| ||||||    
T  7404867 atttgtttacttgtgattttggcaaac-atgggctagttctgattattacaatggagaccgaactagaaatctca 7404794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 12330819 - 12330881
Alignment:
Q  132 tttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaa 194  Q
    |||||||| ||||| |||| ||||||||||||||||||| | || ||  ||||||||||||||    
T  12330819 tttgaaaagggccatgagatgcactcaggttacttagagagaagaacatgtttagaaacaaaa 12330881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 14960946 - 14960987
Alignment:
Q  70 ctagttttgattattacaagcgagaccgaactagagatctca 111  Q
    |||||| |||||||||||||||||| ||||||||| ||||||    
T  14960946 ctagttctgattattacaagcgagatcgaactagaaatctca 14960987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 15390418 - 15390459
Alignment:
Q  70 ctagttttgattattacaagcgagaccgaactagagatctca 111  Q
    |||||| |||||||||||||||||| ||||||||| ||||||    
T  15390418 ctagttctgattattacaagcgagatcgaactagaaatctca 15390459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 14961029 - 14961077
Alignment:
Q  136 aaaacggccacgagaagcactcaggttacttagagggcaggacgggttt 184  Q
    |||| |||||| ||| ||||||||||| ||||||| |||||||||||||    
T  14961029 aaaagggccacaagatgcactcaggttgcttagagagcaggacgggttt 14961077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 15390501 - 15390549
Alignment:
Q  136 aaaacggccacgagaagcactcaggttacttagagggcaggacgggttt 184  Q
    |||| |||||| ||| ||||||||||| ||||||| |||||||||||||    
T  15390501 aaaagggccacaagatgcactcaggttgcttagagagcaggacgggttt 15390549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 17132401 - 17132480
Alignment:
Q  142 gccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgaga 222  Q
    ||||||| | ||||||||||| ||||||| ||| ||||||||| || | |||||| | || |||||| |||||||||||||    
T  17132401 gccacgaaatgcactcaggttgcttagagagcatgacgggttt-gatataaaaaaggaactatctctcgacaggtttgaga 17132480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 3e-28; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 31137685 - 31137589
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||||||||||||  |||||||||||| ||||| ||||| ||||||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  31137685 tgtttgcctgtgttttcagcaaactacgaggtagttctgattgttacaagcgagaccggactagagatctcaggagcacgttgtgcaaaggttttga 31137589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 17863614 - 17863525
Alignment:
Q  46 cctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||||||||||||| |||| ||||||| |||||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||    
T  17863614 cctgtgtttttggcaaattacgggctagttctgattattacaagcgataccgaactagaaatctcagga-catgttttgcaaaggttttga 17863525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 25945595 - 25945692
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttgaa 137  Q
    ||||||||| |||||| ||||||||||  ||||||| |||||||||||||| |||||||||||||||||||| |  |||||||||||| |||||||||    
T  25945595 tgtttgcctatgttttcggcaaactacaggctagttctgattattacaagcaagaccgaactagagatctcaagggcatgttgtgcaatggttttgaa 25945692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 15966268 - 15966348
Alignment:
Q  39 ttgtttgcctgtgtttttggcaaactacgagctagttttgattattac--aagcgagaccgaactagagatctcaggatca 117  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||||  | ||||||||||||||||||||| |||||||    
T  15966268 ttgtttgcctgtgtttttgacaaactacgggctagttctgattattacatatgcgagaccgaactagagatcttaggatca 15966348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 21375824 - 21375923
Alignment:
Q  36 tatttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttg 135  Q
    ||||||||| |||||||||| ||||||||||| || |||| ||||| ||  ||| |||||||||||||| |||||| || ||||||||||||||||||||    
T  21375824 tatttgtttacctgtgttttcggcaaactacgggccagttctgattgttgaaagtgagaccgaactagaaatctcaaga-catgttgtgcaaaggttttg 21375922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 18376834 - 18376740
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    ||||||||||||||| ||||||||||| | ||||||||| |||||||||| ||||||| ||||||||| || ||| || |  ||||||||||||||||    
T  18376834 atttgtttgcctgtgattttggcaaac-aggagctagttctgattattactagcgagatcgaactagaaatgtcaagacc--gttgtgcaaaggtttt 18376740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 20194588 - 20194642
Alignment:
Q  81 tattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||||||||    
T  20194588 tattacaagcgagaccgaactaaaaatctcagga-catgttgtgcaaaggttttga 20194642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 22088611 - 22088665
Alignment:
Q  81 tattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||||||||    
T  22088611 tattacaagcgagaccgaactaaaaatctcagga-catgttgtgcaaaggttttga 22088665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 34500977 - 34501068
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    |||||||||||| |||||||||||   | ||||||| |||||||||||||||||| ||| ||||| |||||| ||   |||||||||||||||||    
T  34500977 tgtttgcctgtgattttggcaaacgggg-gctagttctgattattacaagcgagatcgatctagaaatctcaaga--ctgttgtgcaaaggtttt 34501068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 23010815 - 23010752
Alignment:
Q  69 gctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    ||||||| |||||||||||||||||||| ||||||| |||||| || |||||  ||||||||||||    
T  23010815 gctagttctgattattacaagcgagaccaaactagaaatctcaagaccatgt--tgcaaaggtttt 23010752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 21375940 - 21376027
Alignment:
Q  136 aaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagatt 224  Q
    |||| ||||| |||| ||||||||||||||||||| |||||| |||||| ||||  ||||  ||||  ||||| |||||||||||||||    
T  21375940 aaaagggccatgagatgcactcaggttacttagagagcaggatgggttttgaaa-taaaagggcactgtctctcgacaggtttgagatt 21376027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 12410330 - 12410396
Alignment:
Q  69 gctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| | |||||||||||| |||||||| || | |||||| || |||||||||||||||||||||    
T  12410330 gctagttctaattattacaagcaagaccgaattaaaaatctcacga-catgttgtgcaaaggttttga 12410396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 226
Target Start/End: Complemental strand, 7391365 - 7391275
Alignment:
Q  136 aaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||| ||||||| || ||||| ||||||||||||| |||||||| ||||  ||| |||||  |||   ||||| |||||||||||||||||    
T  7391365 aaaagggccacgggatgcacttaggttacttagagagcaggacgagttttcaaataaaaagggcattgtctctcgacaggtttgagattgc 7391275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 23591097 - 23591042
Alignment:
Q  77 tgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    |||||||||||||||||| ||||||||| |||||| || |  ||||||||||||||||    
T  23591097 tgattattacaagcgagatcgaactagaaatctcaagacc--gttgtgcaaaggtttt 23591042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 18560605 - 18560541
Alignment:
Q  71 tagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||| |||||||||||||| |||  |||||||| || | |||| |||||||||||||||||||||    
T  18560605 tagttatgattattacaagcaagatagaactagaaattttagga-catgttgtgcaaaggttttga 18560541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 20228710 - 20228771
Alignment:
Q  71 tagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    ||||| |||||||||||||||| | ||||||||| |||||| || |  ||||||||||||||||    
T  20228710 tagttatgattattacaagcgatatcgaactagaaatctcaagacc--gttgtgcaaaggtttt 20228771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 22122694 - 22122755
Alignment:
Q  71 tagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    ||||| |||||||||||||||| | ||||||||| |||||| || |  ||||||||||||||||    
T  22122694 tagttatgattattacaagcgatatcgaactagaaatctcaagacc--gttgtgcaaaggtttt 22122755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 6e-26; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 37 - 226
Target Start/End: Complemental strand, 12810344 - 12810140
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttg- 135  Q
    |||||||| || ||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| | || |||||| ||||||||||||||||||||     
T  12810344 atttgtttaccggtgttttcggcaaactacgggctagttctgattattacaagcgagaccgaactaaaaatatcagga-catgttgtgcaaaggttttga 12810246  T
Q  136 ---------------aaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttga 220  Q
                   |||| ||| |||||| ||||||||||||||||||| ||||||| ||||| |||| | |||  ||||  ||||| |||||||||||    
T  12810245 taaaaaacggtttgaaaaagggcaacgagatgcactcaggttacttagagagcaggacaggttttgaaatagaaagggcactgtctctcgacaggtttga 12810146  T
Q  221 gattgc 226  Q
    ||||||    
T  12810145 gattgc 12810140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 10070346 - 10070432
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||    
T  10070346 gtgttttcggcaaacaacgagctagttatgattattacaagcgagaccgaactagaaatcttagga-catgttgtgcaaaggttttga 10070432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 14633098 - 14633012
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| || |||||||| ||||||| |||||||||||||||||||| ||||||| |||||| || |||||||||||||||||||||    
T  14633098 gtgttttcggaaaactacgggctagttctgattattacaagcgagaccaaactagaaatctcatga-catgttgtgcaaaggttttga 14633012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 11889834 - 11889748
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| ||||||||||| | ||||| |||||||||||||  ||||||||||||| ||||||||| ||||||||| |||||||||||    
T  11889834 gtgttttcggcaaactacgggttagttctgattattacaagtaagaccgaactagaaatctcagga-catgttgtgtaaaggttttga 11889748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 11889728 - 11889642
Alignment:
Q  141 ggccacgagaagcactcaggttacttagagggcaggacgggttt-agaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||||||| | ||||||||||||||||||| ||||| ||| ||| |||   |||||| ||||  ||||| |||||||||||||||||    
T  11889728 ggccacgaaatgcactcaggttacttagagagcagggcggatttcagagtaaaaaaaggcactgtctctcgacaggtttgagattgc 11889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 14632992 - 14632907
Alignment:
Q  141 ggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||||| ||| | ||||||||||||||||| ||| |||||||||   || |||||  ||||  ||||| |||||||||||||||||    
T  14632992 ggccacaagatgtactcaggttacttagagagcaagacgggttttagaataaaaagggcactgtctctcgacaggtttgagattgc 14632907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 1e-24; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 22928244 - 22928341
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttg 135  Q
    |||||||| || ||||||| | ||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  22928244 atttgtttaccggtgttttcgacaaactacgggctagttctgattattacaagcgagaacgaactagaaatctcagga-catgttgtgcaaaggttttg 22928341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 16227049 - 16226954
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||| || ||||||| || |||||||| ||||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  16227049 tgtttaccggtgttttcggaaaactacgggctagttctgattattacaaacgagaccgaactagaaatctcagga-catgttgtgcaaatgttttga 16226954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 57 - 136
Target Start/End: Complemental strand, 16224433 - 16224355
Alignment:
Q  57 ggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| || ||| || |||||||||||||||||||||    
T  16224433 ggcaaactacgtgctagttttgattattacaagcgataccgaactagaaatttcaaga-catgttgtgcaaaggttttga 16224355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 13908478 - 13908564
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| ||||||||||| ||||| | ||||||||||||||| |||||||||||| ||||||||| ||||| |||| ||||||||||    
T  13908478 gtgttttcggcaaactacgggctagatctgattattacaagcgggaccgaactagaaatctcagga-catgtagtgcgaaggttttga 13908564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 240 - 345
Target Start/End: Original strand, 2178659 - 2178764
Alignment:
Q  240 gtttatgaatggctacaagattaatgttcacattgtcagatgattgggcacaatgttacggcttgtcgttggctacaccctaagcaggttgttgaaaaaa 339  Q
    |||||||||||||| |  ||||| |||||||||||||| |||||||| ||| ||||||||||||  |||||||| ||||| |  |||||||| ||||| |    
T  2178659 gtttatgaatggctccctgattattgttcacattgtcaaatgattggtcacgatgttacggcttagcgttggctgcacccaacacaggttgtggaaaaga 2178758  T
Q  340 ttgatc 345  Q
    ||||||    
T  2178759 ttgatc 2178764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 16224335 - 16224251
Alignment:
Q  141 ggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattg 225  Q
    |||||||||| ||||||| |||||||||||  ||||||| |||| |||| |||||  ||||  ||||| || |||||||||||||    
T  16224335 ggccacgagaggcactcatgttacttagagaccaggacgagttttgaaataaaaagggcactgtctctcgataggtttgagattg 16224251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 4e-24; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 50127 - 50223
Alignment:
Q  39 ttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||| || ||||||||| ||||||||| ||||||| |||||||||||||||||||||| ||||| |||||| || |||||||||||||||||||||    
T  50127 ttgtttaccggtgtttttgacaaactacgggctagttctgattattacaagcgagaccgagctagaaatctcatga-catgttgtgcaaaggttttga 50223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 222396 - 222596
Alignment:
Q  39 ttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttg--- 135  Q
    |||||| || |||||||  |||||| ||| ||||||| |||||||||||||||||||||||||||| |||||| || ||||||||||||| ||||||       
T  222396 ttgtttaccggtgttttcagcaaacaacgggctagttctgattattacaagcgagaccgaactagaaatctcaaga-catgttgtgcaaatgttttgatc 222494  T
Q  136 ------------aaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagat 223  Q
                |||| |||||||||| ||||||||||||||||||| | |||||| |||| ||||  |||||  |||  ||||||||||||||||||||    
T  222495 gaaaacggttttaaaaaggccacgagatgcactcaggttacttagagagaaggacgagttttgaaa-taaaaagacactgtctcttgacaggtttgagat 222593  T
Q  224 tgc 226  Q
    |||    
T  222594 tgc 222596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 50241 - 50331
Alignment:
Q  136 aaaacggccacgagaagcactcaggttacttagagggcaggacgggtt-tagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||| |||||||| | ||||||||||||||||||  |||||||||||| ||| ||| ||||| |||   ||||| |||||||||||||||||    
T  50241 aaaaaggccacgaaatgcactcaggttacttagaaagcaggacgggttgtag-aacgaaaaaggcattgtctctcgacaggtttgagattgc 50331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 376736 - 376832
Alignment:
Q  36 tatttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttt 133  Q
    ||||||||| || ||||||||||||||||| | ||||||| ||||| |||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  376736 tatttgtttaccggtgtttttggcaaactatgggctagttctgatttttacaagcgagaccgaactagaaatctca-gaacatgttgtgcaaaggttt 376832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 370192 - 370102
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    |||||||||||| |||||||||||   | ||||||| |||||||||||||||||| ||||||||| |||||| ||  ||||||||||||||||||    
T  370192 tgtttgcctgtgattttggcaaacg--gggctagttctgattattacaagcgagatcgaactagaaatctcaaga--atgttgtgcaaaggtttt 370102  T

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Target: scaffold0338 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 16982 - 17078
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||||||| | | |||||||||||||||| |  ||||||||||||| |||||||    
T  16982 tgtttgcctgtgttttcggcaaactacgggctagttctgattattacaagcaaaatcgaactagagatctcatgggcatgttgtgcaaatgttttga 17078  T

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Target: scaffold0005 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 184194 - 184280
Alignment:
Q  49 gtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||||| || |||||||| ||||||| |||||||||||||||||||| ||||||| |||||| || |||||||||||||||||||||    
T  184194 gtgttttcggaaaactacgggctagttctgattattacaagcgagaccaaactagaaatctcatga-catgttgtgcaaaggttttga 184280  T

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Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 184291 - 184385
Alignment:
Q  132 tttgaaaacggccacgagaagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    |||||||| |||||| ||| | ||||||||||||||||| ||| |||||||||   || |||||  ||||  ||||| |||||||||||||||||    
T  184291 tttgaaaaaggccacaagatgtactcaggttacttagagagcaagacgggttttagaataaaaagggcactgtctctcgacaggtttgagattgc 184385  T

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Target: scaffold0170 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 1156 - 1231
Alignment:
Q  150 aagcactcaggttacttagagggcaggacgggtttagaaacaaaaaatgcaccatctcttgacaggtttgagattgc 226  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    |||  |||||||||||||||||||||||    
T  1156 aagcactcaggttacttagagagcaggacgggtttagaaacaaaagga-cactgtctcttgacaggtttgagattgc 1231  T

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Target: scaffold0210 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 18011 - 18109
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||||| || ||||||| ||||||||||  ||||||| ||||||||||||||| || ||||||||| ||  || || |||||||||||||||||||||    
T  18011 atttgtttaccggtgttttcggcaaactacaggctagttctgattattacaagcgggatcgaactagaaattccacga-catgttgtgcaaaggttttga 18109  T

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Target: scaffold0210; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 25903 - 26001
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    |||||||| || ||||||| ||||||||||  ||||||| ||||||||||||||| || ||||||||| ||  || || |||||||||||||||||||||    
T  25903 atttgtttaccggtgttttcggcaaactacaggctagttctgattattacaagcgggatcgaactagaaattccacga-catgttgtgcaaaggttttga 26001  T

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Target: scaffold0099 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 37581 - 37492
Alignment:
Q  37 atttgtttgcctgtgtttttgg-caaactacgagct-agttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtg 124  Q
    |||||||||||| |||||| || ||||||||| | | |||| ||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  37581 atttgtttgcctatgttttcggacaaactacggggttagttctgattattataagcgaaaccgaactagagatctcaggagcatgttgtg 37492  T

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Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 20849 - 20754
Alignment:
Q  40 tgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggttttga 136  Q
    ||||| || ||||||| ||||||||||| ||||||| | |||||| ||||||||| ||||| ||| |||| |||| ||||||||| |||||||||||    
T  20849 tgtttaccggtgttttcggcaaactacgggctagttcttattattccaagcgagatcgaacaagaaatcttagga-catgttgtgaaaaggttttga 20754  T

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Target: scaffold0056; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 54814 - 54757
Alignment:
Q  75 tttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    ||||||||||||||||||| | |||||||| |||||| || |  ||||||||||||||||    
T  54814 tttgattattacaagcgaggcggaactagaaatctcaagacc--gttgtgcaaaggtttt 54757  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 77294 - 77200
Alignment:
Q  37 atttgtttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctcaggatcatgttgtgcaaaggtttt 134  Q
    |||||||| |||||| ||||||||||| | | |||||||| |||||||||||||| ||  |||||||| |||||| || |  ||||||||||||||||    
T  77294 atttgtttacctgtgattttggcaaac-aggggctagtttggattattacaagcgggattgaactagaaatctcaagacc--gttgtgcaaaggtttt 77200  T

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Target: scaffold0194 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 31541 - 31609
Alignment:
Q  42 tttgcctgtgtttttggcaaactacgagctagttttgattattacaagcgagaccgaactagagatctca 111  Q
    |||||||||| ||||| ||||| | | ||||||| |||||||||||||||||| ||| ||||| ||||||    
T  31541 tttgcctgtgattttgacaaac-aggggctagttatgattattacaagcgagatcgagctagaaatctca 31609  T

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