View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13410_low_5 (Length: 203)
Name: NF13410_low_5
Description: NF13410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13410_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 2134126 - 2133958
Alignment:
| Q |
19 |
ggaaaggtgaacaaggattgtatacagtgggtttcacaagaagaggtctacatggaacatactttgatgccatcaaaatagctgaagatattactaatca |
118 |
Q |
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| T |
2134126 |
ggaaaggtgaacaaggattgtatacagtgggtttcacaagaagaggtctacatggaacatactttgatgccatcaaaatagctgaagatattactaatca |
2134027 |
T |
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| Q |
119 |
atggaaaacactgaagagcaagagttgttgtgattcacatatcatactactcaataattcataaaccta |
187 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2134026 |
atggaaaacacttaagagcaagagttgttgtgattcacatatcatactactcaataattcataaaccta |
2133958 |
T |
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