View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13413_low_6 (Length: 236)
Name: NF13413_low_6
Description: NF13413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13413_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 2621647 - 2621448
Alignment:
| Q |
23 |
tgtcatggtcaagtgtgtaccttaacaaccgtgcaatcttctttgctttcattgtctatgcaaacctgacaactacaaaacataacaacattagcatgtg |
122 |
Q |
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| T |
2621647 |
tgtcatggtcaagtgtgtaccttaacaaccgtgcaatcttctttgctttcattgtctatgcaaacctgacaactacaaaacataacaacattagcatgtg |
2621548 |
T |
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| Q |
123 |
tgtgttatcgaataatcaaattaatgggagagaaa-ccattcaggaaatttaatttgaagagtacagaagaattatatacttacggtggaccatatatat |
221 |
Q |
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| T |
2621547 |
tgtgttatcgaataatcaaattaatgggagagaaacccattcaggaaatttaatttgaagagtacagaagaattatatacttacggtggaccatatatat |
2621448 |
T |
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