View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1341R-Insertion-16 (Length: 304)
Name: NF1341R-Insertion-16
Description: NF1341R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1341R-Insertion-16 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 9 - 288
Target Start/End: Original strand, 32190288 - 32190568
Alignment:
| Q |
9 |
gttgggaaagttcccacttatgttgccaccaaattgtatccctctccaacattcaattttggtagtaaggataaaccccaaagccaaatccaacaaatac |
108 |
Q |
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| T |
32190288 |
gttgggaaagttcccacttatgttgccaccaaattgtatccctctccaacattcaattttggtagtaaggataaaccccaaagccaaatccaacaaatac |
32190387 |
T |
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| Q |
109 |
aaatggatggtagtttcaatttcaaacattgaaaagtaaaaaaggcgaaggaaatggatggatggaatgagggagaatataggaccacataaatgatcta |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32190388 |
aaatggatggtagtttcaatttcaaacattgaaaagtaaaaaagttgaaggaaatggatggatggaatgagggagaatataggaccacataaatgatcta |
32190487 |
T |
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| Q |
209 |
gtgatgtcacccacttagtccttgtatt-tataatcaatcatgaagaaaaataaaaagcgtgtcaaaagccaaacccacca |
288 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32190488 |
gtgatgtcacccacttagtccttgtattgtataatcaatcatgaagaaaaataaaaagcgtgtcaaaagccaaacccacca |
32190568 |
T |
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