View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1341R-Insertion-2 (Length: 1100)

Name: NF1341R-Insertion-2
Description: NF1341R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1341R-Insertion-2
NF1341R-Insertion-2
[»] chr6 (49 HSPs)
chr6 (293-959)||(13364238-13364919)
chr6 (9-275)||(13364914-13365180)
chr6 (440-531)||(7265570-7265661)
chr6 (417-508)||(34073347-34073439)
chr6 (440-522)||(19040343-19040425)
chr6 (440-508)||(7996378-7996446)
chr6 (440-508)||(8022355-8022423)
chr6 (424-531)||(9658853-9658961)
chr6 (450-528)||(32511646-32511724)
chr6 (447-523)||(31579212-31579286)
chr6 (439-532)||(33001265-33001358)
chr6 (425-508)||(9027153-9027237)
chr6 (418-509)||(9629351-9629443)
chr6 (425-531)||(34595109-34595216)
chr6 (417-510)||(5732508-5732602)
chr6 (462-508)||(9025494-9025540)
chr6 (462-515)||(7377992-7378045)
chr6 (462-510)||(21924933-21924981)
chr6 (447-503)||(30866149-30866205)
chr6 (469-532)||(12627553-12627616)
chr6 (477-532)||(26402656-26402711)
chr6 (462-508)||(9617447-9617493)
chr6 (462-508)||(26562702-26562748)
chr6 (441-502)||(10842524-10842585)
chr6 (462-507)||(13360373-13360418)
chr6 (417-508)||(34447360-34447450)
chr6 (462-506)||(7086808-7086852)
chr6 (462-502)||(11591876-11591916)
chr6 (440-508)||(20371110-20371178)
chr6 (462-506)||(26178683-26178727)
chr6 (426-508)||(3398595-3398677)
chr6 (469-508)||(7027262-7027301)
chr6 (440-507)||(7938107-7938174)
chr6 (477-520)||(18612649-18612692)
chr6 (440-507)||(32298608-32298675)
chr6 (462-508)||(7723250-7723296)
chr6 (462-508)||(9024176-9024222)
chr6 (462-508)||(9195754-9195800)
chr6 (92-134)||(13326882-13326924)
chr6 (426-507)||(13851712-13851794)
chr6 (462-532)||(26314610-26314680)
chr6 (469-531)||(28152118-28152180)
chr6 (478-508)||(28862151-28862181)
chr6 (729-759)||(29739120-29739150)
chr6 (462-507)||(4420180-4420225)
chr6 (400-508)||(8365519-8365628)
chr6 (462-507)||(19044477-19044522)
chr6 (462-495)||(19602194-19602227)
chr6 (462-507)||(34895035-34895080)
[»] chr3 (39 HSPs)
chr3 (654-757)||(41444641-41444744)
chr3 (417-510)||(8383224-8383318)
chr3 (440-508)||(8039835-8039903)
chr3 (449-532)||(45451553-45451636)
chr3 (459-529)||(25093512-25093582)
chr3 (469-531)||(40993312-40993374)
chr3 (450-515)||(8789543-8789608)
chr3 (450-510)||(7928451-7928511)
chr3 (417-508)||(10455757-10455849)
chr3 (398-491)||(25064857-25064951)
chr3 (425-530)||(26492183-26492289)
chr3 (462-507)||(20691332-20691377)
chr3 (462-507)||(40150572-40150617)
chr3 (462-529)||(10954965-10955032)
chr3 (447-506)||(17005621-17005680)
chr3 (467-529)||(13845504-13845566)
chr3 (467-529)||(35222956-35223018)
chr3 (452-510)||(49505152-49505210)
chr3 (467-528)||(2941576-2941637)
chr3 (462-531)||(20503478-20503547)
chr3 (440-501)||(32804547-32804608)
chr3 (419-483)||(24633736-24633800)
chr3 (462-502)||(29508457-29508497)
chr3 (462-513)||(4466595-4466646)
chr3 (440-531)||(7171493-7171583)
chr3 (467-510)||(13414487-13414530)
chr3 (477-508)||(29386511-29386542)
chr3 (462-529)||(35160733-35160800)
chr3 (450-504)||(10690266-10690320)
chr3 (462-507)||(11251991-11252034)
chr3 (425-502)||(11658790-11658868)
chr3 (469-515)||(18426969-18427015)
chr3 (462-528)||(23271974-23272040)
chr3 (462-496)||(29112292-29112326)
chr3 (462-532)||(55401088-55401158)
chr3 (477-530)||(3631712-3631765)
chr3 (462-507)||(13807182-13807227)
chr3 (462-531)||(20141109-20141177)
chr3 (452-509)||(38731221-38731278)
[»] chr5 (37 HSPs)
chr5 (449-529)||(30502367-30502447)
chr5 (449-529)||(30542710-30542790)
chr5 (417-530)||(26312736-26312850)
chr5 (440-530)||(28588652-28588742)
chr5 (462-531)||(23012385-23012454)
chr5 (440-508)||(3966494-3966562)
chr5 (462-510)||(34879363-34879411)
chr5 (424-506)||(15410450-15410533)
chr5 (434-508)||(41091257-41091334)
chr5 (425-510)||(21191054-21191140)
chr5 (462-528)||(32630715-32630781)
chr5 (440-501)||(12264836-12264897)
chr5 (462-523)||(18421826-18421887)
chr5 (440-508)||(11685930-11685998)
chr5 (442-510)||(16203793-16203861)
chr5 (477-529)||(30099017-30099069)
chr5 (446-529)||(21576724-21576807)
chr5 (462-508)||(6471889-6471935)
chr5 (440-506)||(23220974-23221040)
chr5 (450-508)||(36838544-36838602)
chr5 (467-525)||(42029770-42029828)
chr5 (440-529)||(17123039-17123128)
chr5 (418-491)||(27932204-27932277)
chr5 (466-510)||(2548404-2548448)
chr5 (440-508)||(6035474-6035541)
chr5 (462-513)||(2577175-2577226)
chr5 (462-508)||(17925172-17925218)
chr5 (462-508)||(39205893-39205939)
chr5 (462-507)||(8325065-8325110)
chr5 (462-507)||(12927667-12927712)
chr5 (462-507)||(14873530-14873575)
chr5 (462-507)||(15086484-15086529)
chr5 (462-531)||(21194100-21194169)
chr5 (462-515)||(21194198-21194251)
chr5 (462-499)||(24273039-24273076)
chr5 (462-499)||(24389138-24389175)
chr5 (467-504)||(39758290-39758327)
[»] chr1 (50 HSPs)
chr1 (424-510)||(9709794-9709881)
chr1 (440-529)||(36878452-36878541)
chr1 (453-508)||(44482234-44482289)
chr1 (450-508)||(20157350-20157408)
chr1 (450-507)||(38503321-38503378)
chr1 (440-508)||(6427341-6427409)
chr1 (436-515)||(14332635-14332714)
chr1 (440-502)||(17831537-17831599)
chr1 (462-531)||(11605912-11605981)
chr1 (462-531)||(19637781-19637850)
chr1 (447-508)||(40285654-40285715)
chr1 (469-510)||(52903269-52903310)
chr1 (462-506)||(1864882-1864926)
chr1 (425-508)||(7918211-7918295)
chr1 (441-529)||(21530681-21530769)
chr1 (464-508)||(34371728-34371772)
chr1 (462-510)||(38075968-38076016)
chr1 (462-510)||(40181884-40181932)
chr1 (440-532)||(46348359-46348451)
chr1 (440-523)||(13997874-13997957)
chr1 (441-500)||(25098563-25098622)
chr1 (441-507)||(25452151-25452215)
chr1 (467-510)||(30749858-30749901)
chr1 (467-510)||(30771309-30771352)
chr1 (450-508)||(9629900-9629958)
chr1 (462-508)||(25361899-25361945)
chr1 (425-501)||(398772-398849)
chr1 (462-515)||(16927178-16927231)
chr1 (436-508)||(9828031-9828103)
chr1 (462-510)||(39130765-39130813)
chr1 (450-510)||(39953144-39953204)
chr1 (440-507)||(2896122-2896189)
chr1 (425-507)||(5898267-5898350)
chr1 (447-506)||(10233251-10233310)
chr1 (468-531)||(29163358-29163421)
chr1 (424-510)||(41877468-41877555)
chr1 (469-508)||(48148037-48148076)
chr1 (462-508)||(1486709-1486755)
chr1 (469-531)||(1815277-1815339)
chr1 (440-506)||(10572591-10572657)
chr1 (462-532)||(22515863-22515933)
chr1 (462-508)||(25272495-25272541)
chr1 (463-513)||(43966820-43966870)
chr1 (477-525)||(14248856-14248902)
chr1 (462-503)||(14443178-14443219)
chr1 (462-499)||(19324575-19324612)
chr1 (462-507)||(23636050-23636095)
chr1 (462-507)||(28273089-28273134)
chr1 (447-500)||(36905995-36906048)
chr1 (462-531)||(43492471-43492540)
[»] chr8 (31 HSPs)
chr8 (462-530)||(33405362-33405430)
chr8 (462-515)||(4786331-4786384)
chr8 (450-510)||(34897086-34897146)
chr8 (462-529)||(3025564-3025631)
chr8 (462-507)||(12606830-12606875)
chr8 (441-510)||(13844594-13844663)
chr8 (462-510)||(12985405-12985453)
chr8 (462-501)||(26418349-26418388)
chr8 (441-516)||(31236569-31236644)
chr8 (462-508)||(11927086-11927132)
chr8 (428-501)||(24362209-24362283)
chr8 (462-507)||(12559107-12559152)
chr8 (462-507)||(14134712-14134757)
chr8 (467-508)||(26902175-26902216)
chr8 (417-524)||(37283796-37283902)
chr8 (441-505)||(39954282-39954346)
chr8 (479-531)||(44462172-44462224)
chr8 (479-531)||(44469705-44469757)
chr8 (425-531)||(926765-926872)
chr8 (450-505)||(4611535-4611590)
chr8 (462-513)||(7658476-7658527)
chr8 (440-507)||(20679396-20679463)
chr8 (470-508)||(8847277-8847315)
chr8 (462-508)||(11944678-11944724)
chr8 (462-532)||(20873082-20873152)
chr8 (462-515)||(4948665-4948718)
chr8 (444-501)||(20785472-20785529)
chr8 (469-506)||(22493514-22493551)
chr8 (462-531)||(38079012-38079081)
chr8 (462-515)||(40332204-40332257)
chr8 (468-529)||(43737790-43737851)
[»] chr7 (40 HSPs)
chr7 (450-528)||(20549792-20549870)
chr7 (467-529)||(39138462-39138524)
chr7 (444-508)||(5548671-5548735)
chr7 (462-506)||(23128663-23128707)
chr7 (426-508)||(22602710-22602793)
chr7 (425-506)||(15902797-15902879)
chr7 (418-515)||(26733272-26733370)
chr7 (422-505)||(3520345-3520430)
chr7 (400-508)||(27944991-27945100)
chr7 (462-510)||(9482947-9482995)
chr7 (462-530)||(21880165-21880233)
chr7 (417-508)||(26329382-26329474)
chr7 (440-508)||(32308111-32308179)
chr7 (469-508)||(18226964-18227003)
chr7 (464-506)||(3142080-3142122)
chr7 (462-520)||(4909164-4909222)
chr7 (470-515)||(640134-640179)
chr7 (450-507)||(19206051-19206108)
chr7 (468-529)||(25956464-25956525)
chr7 (417-508)||(30731004-30731094)
chr7 (462-510)||(3721106-3721154)
chr7 (463-507)||(5835261-5835305)
chr7 (467-515)||(18213026-18213074)
chr7 (429-528)||(22484004-22484104)
chr7 (450-510)||(32287461-32287521)
chr7 (426-508)||(1433430-1433513)
chr7 (463-530)||(5937399-5937466)
chr7 (469-532)||(15680829-15680892)
chr7 (462-513)||(21568617-21568668)
chr7 (462-508)||(7328691-7328737)
chr7 (462-508)||(16341509-16341555)
chr7 (462-508)||(17307906-17307952)
chr7 (452-506)||(17851434-17851488)
chr7 (462-508)||(19992014-19992060)
chr7 (439-517)||(25481892-25481970)
chr7 (462-504)||(38134410-38134452)
chr7 (440-505)||(2948674-2948739)
chr7 (431-531)||(7197274-7197375)
chr7 (440-501)||(22868033-22868094)
chr7 (450-491)||(29787386-29787427)
[»] chr4 (31 HSPs)
chr4 (469-531)||(12797315-12797377)
chr4 (425-531)||(21945478-21945585)
chr4 (437-503)||(40613438-40613504)
chr4 (450-515)||(8423711-8423776)
chr4 (451-508)||(30982878-30982935)
chr4 (446-510)||(16189706-16189770)
chr4 (447-531)||(29205442-29205526)
chr4 (440-500)||(36635315-36635375)
chr4 (425-531)||(23292963-23293070)
chr4 (448-507)||(33950135-33950194)
chr4 (463-522)||(40179622-40179681)
chr4 (462-501)||(56488517-56488556)
chr4 (463-529)||(8402721-8402787)
chr4 (462-528)||(30103337-30103402)
chr4 (462-507)||(5775359-5775404)
chr4 (462-515)||(54580016-54580069)
chr4 (477-529)||(16073422-16073474)
chr4 (462-530)||(38846990-38847058)
chr4 (450-501)||(3712516-3712567)
chr4 (465-508)||(7970535-7970578)
chr4 (479-522)||(20950413-20950456)
chr4 (462-508)||(56257946-56257990)
chr4 (464-510)||(10499268-10499314)
chr4 (450-508)||(13783282-13783340)
chr4 (462-508)||(40742604-40742650)
chr4 (462-500)||(46180944-46180982)
chr4 (462-507)||(9996853-9996898)
chr4 (447-508)||(15659760-15659821)
chr4 (462-507)||(18576038-18576083)
chr4 (462-499)||(22440609-22440646)
chr4 (440-508)||(35723384-35723453)
[»] chr2 (38 HSPs)
chr2 (452-510)||(34691803-34691861)
chr2 (452-510)||(34714215-34714273)
chr2 (425-513)||(18276496-18276585)
chr2 (440-508)||(37411244-37411312)
chr2 (464-507)||(18889592-18889635)
chr2 (462-520)||(5367205-5367263)
chr2 (448-530)||(18570971-18571053)
chr2 (467-529)||(20242706-20242768)
chr2 (400-508)||(21782820-21782927)
chr2 (440-506)||(39279666-39279732)
chr2 (450-508)||(44860321-44860379)
chr2 (400-508)||(20539674-20539783)
chr2 (450-511)||(23718027-23718088)
chr2 (450-511)||(24105699-24105760)
chr2 (425-500)||(21616737-21616813)
chr2 (464-508)||(35056883-35056927)
chr2 (469-531)||(2438696-2438758)
chr2 (450-508)||(24975325-24975383)
chr2 (450-508)||(29970549-29970607)
chr2 (462-504)||(30527599-30527641)
chr2 (440-510)||(31018581-31018651)
chr2 (463-529)||(43585984-43586050)
chr2 (425-510)||(896188-896272)
chr2 (462-507)||(38355888-38355933)
chr2 (462-502)||(25544494-25544534)
chr2 (462-530)||(30404828-30404896)
chr2 (426-501)||(35449489-35449565)
chr2 (442-498)||(36281678-36281734)
chr2 (448-491)||(22084849-22084892)
chr2 (450-509)||(28677910-28677968)
chr2 (450-507)||(1327979-1328034)
chr2 (440-506)||(18420436-18420502)
chr2 (653-722)||(20124246-20124316)
chr2 (417-505)||(28412317-28412404)
chr2 (462-508)||(45000846-45000892)
chr2 (462-515)||(5473341-5473394)
chr2 (467-508)||(34784982-34785023)
chr2 (450-507)||(42832277-42832334)
[»] scaffold0022 (1 HSPs)
scaffold0022 (425-507)||(90818-90901)
[»] scaffold0011 (1 HSPs)
scaffold0011 (462-507)||(240022-240067)
[»] scaffold0697 (1 HSPs)
scaffold0697 (441-529)||(1636-1724)
[»] scaffold0053 (1 HSPs)
scaffold0053 (425-532)||(8773-8881)
[»] scaffold0008 (1 HSPs)
scaffold0008 (417-508)||(263372-263464)
[»] scaffold0049 (1 HSPs)
scaffold0049 (457-508)||(56930-56981)
[»] scaffold0036 (1 HSPs)
scaffold0036 (441-508)||(9747-9814)
[»] scaffold0123 (1 HSPs)
scaffold0123 (462-504)||(44529-44571)
[»] scaffold0020 (1 HSPs)
scaffold0020 (462-508)||(135312-135358)
[»] scaffold0050 (1 HSPs)
scaffold0050 (462-530)||(70291-70359)
[»] scaffold0044 (1 HSPs)
scaffold0044 (462-505)||(53193-53236)
[»] scaffold0083 (1 HSPs)
scaffold0083 (477-531)||(45507-45561)
[»] scaffold0223 (1 HSPs)
scaffold0223 (400-508)||(20122-20231)
[»] scaffold0116 (1 HSPs)
scaffold0116 (467-508)||(9916-9957)


Alignment Details
Target: chr6 (Bit Score: 508; Significance: 0; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 508; E-Value: 0
Query Start/End: Original strand, 293 - 959
Target Start/End: Complemental strand, 13364919 - 13364238
Alignment:
Q  293 taatgcaaaattcttccataaaatttggagtgaattttttctttctttcatgaaattgtaactgtggagcagtttgattccacagtaatcaatagatgag 392  Q
    ||||| ||||||||| |||||||||||||||||||||||  ||||||||| |||||||||| |||||||||||||||||||||| |||| ||||||||||    
T  13364919 taatggaaaattcttgcataaaatttggagtgaatttttg-tttctttcaagaaattgtaattgtggagcagtttgattccacaataattaatagatgag 13364821  T
Q  393 tgaagatctatgaaacacgtatagggacactagacacgacacagacatgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatc 492  Q
    ||||||||||||||||||||||||||||| |||||||| |||| |||||||||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  13364820 tgaagatctatgaaacacgtatagggacattagacacgccacatacatgacatgccgacactgcttataatttgagaaaatcatataattcagtgtaatc 13364721  T
Q  493 atatgtgtcggtgtcggatacgatacatgtctgacacc----------------gacgagtgtctgtgcttcataggtgaagatccaatctgaccctcac 576  Q
    |||||||||||||| ||| |||||||||||||||||||                ||||||||||||||||||||||||||||||||||||||||||||||    
T  13364720 atatgtgtcggtgttggacacgatacatgtctgacaccaggacacgtctattccgacgagtgtctgtgcttcataggtgaagatccaatctgaccctcac 13364621  T
Q  577 aactttctctcagcccaatttagtcttgacaaagtataaactcaaactagttagtccgtctattataatgaatgaatgactaatttgtccttcatatcaa 676  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13364620 aactttctctcagcccaatttagtcttgacaaagtataaactcaaactagttagtccgtctattataatgaatgaatgactaatttgtccttcatatcaa 13364521  T
Q  677 aatgtaagagactaatatgggttaattttttgtcggaactaaattgcgccgagagaaaattgtgagggatcaaattgggtcatcatagaatggtaaatca 776  Q
    |||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13364520 aatgtaagagactaatatgggttaatcttttgtcggaactaaatttcaccgagagaaaattgtgagggatcaaattgggtcatcatagaatggtaaatca 13364421  T
Q  777 gtttctgaaattgatgaaagttaatgaatttagtcgtttcatcaatttatttgataaatctgtatagt-aaatagagatcaactatac-aatgatatgct 874  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  13364420 gtttctgaaattgatgatagttaatgaatttagtcgtttcatcaatttattttataaatctgtatagtaaaatagagatcaactatacgaatgatatgct 13364321  T
Q  875 tatccaagacctgttgcacccgtgctatcatatttgggatgaaatgatatggccctaaaatgactatataagtaggagttatctc 959  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13364320 tatccaagacctgttggacccgtgctatcatattt-ggatgaaatgatatgg-cctaaaatgactatataagtaggagttatctc 13364238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 9 - 275
Target Start/End: Complemental strand, 13365180 - 13364914
Alignment:
Q  9 aaagcttccttcaatgaagccgctttcgaggcggagcggctcaccctcgacgcagaagctcgtcgagcaatggcggttgaggaggagaaatcttcgatgc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13365180 aaagcttccttcaatgaagccgctttcgaggcggagcggctcaccctcgacgctgaagctcgtcgagcaatggcggttgaggaggagaaatcttcgatgc 13365081  T
Q  109 aggatgatccgaaagcttggaaatgggtaattagaaagaggatatgggatttgatggaagggaataattttgctcagaatcctagacctgttcatcatag 208  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13365080 aggatgatccaaaagcttggaaatgggtgattagaaagaggatatgggatttgatggaagggaataattttgctcagaatcctagacctgttcatcatag 13364981  T
Q  209 gattcctaattttgttggtgcttctcttgctgctgataaggtatgctggtgaatgtgattgtaatgg 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13364980 gattcctaattttgttggtgcttctcttgctgctgataaggtatgctggtgaatgtgattttaatgg 13364914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 440 - 531
Target Start/End: Complemental strand, 7265661 - 7265570
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    ||||| |||||||||||| || |||||||||||||| ||||||||||||||| |||||||||||||||||| || ||||||||| |||||||    
T  7265661 tgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaatacatgtccgacaccg 7265570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 34073439 - 34073347
Alignment:
Q  417 ggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||| |||||||||| |||| ||||||||||||| |||| || |||||||||||||  ||||||||||||||| ||||| ||||||||||    
T  34073439 ggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcg 34073347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 440 - 522
Target Start/End: Original strand, 19040343 - 19040425
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgt 522  Q
    ||||| ||| |||||||| || |||||||||||||| ||||||||||||||| ||||||||| |||||||| |||| ||||||    
T  19040343 tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacgacacatgt 19040425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 440 - 508
Target Start/End: Complemental strand, 7996446 - 7996378
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||| |||| ||| || |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  7996446 tgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 7996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 440 - 508
Target Start/End: Original strand, 8022355 - 8022423
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||| |||| ||| || |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  8022355 tgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 9658853 - 9658961
Alignment:
Q  424 agacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgt 522  Q
    ||||||||||| |||| ||||| ||| |||||||| || |||| ||||||||| ||||||||||||||| |||| |||||||||  || |||| || |||    
T  9658853 agacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgttagacacgacacgtgt 9658952  T
Q  523 ctgacaccg 531  Q
    |||||||||    
T  9658953 ctgacaccg 9658961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 450 - 528
Target Start/End: Complemental strand, 32511724 - 32511646
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgaca 528  Q
    |||||||| || |||| ||||||||| ||||||||||||||| ||| |||| |||||||||||||| | ||||||||||    
T  32511724 acaccgctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcggatacgacatatgtctgaca 32511646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 31579286 - 31579212
Alignment:
Q  447 ccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtc 523  Q
    ||||||||| | || |||||||||||||| |||||||||||||||  ||||||||||||||||| |||| |||||||    
T  31579286 ccaacaccgttaataatttgagaaaatcacataattcagtgtaat--tatgtgtcggtgtcggacacgacacatgtc 31579212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 439 - 532
Target Start/End: Complemental strand, 33001358 - 33001265
Alignment:
Q  439 atgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccga 532  Q
    |||||| ||| |||| ||| || |||||| ||||||| |||||| | |||||| |||||||||||||||||| |||| || |||||||||||||    
T  33001358 atgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacaccga 33001265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 425 - 508
Target Start/End: Original strand, 9027153 - 9027237
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||| |||| ||||| ||| |||||||| || |||||||| ||||| ||||||| ||||||| ||||||||||||||||    
T  9027153 gacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcg 9027237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 418 - 509
Target Start/End: Original strand, 9629351 - 9629443
Alignment:
Q  418 gacactagacacgacacagacat-gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgg 509  Q
    |||||| |||||||||| || || |||| ||| |||||||  || |||||||||||||| |||||||| |||||| |||||||||||||||||    
T  9629351 gacactggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgg 9629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 425 - 531
Target Start/End: Original strand, 34595109 - 34595216
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtc 523  Q
    |||||||||| |||| ||||| ||| ||||  || || |||||| ||||||| ||||||||||||||| | | |||||||||||||| |||| || ||||    
T  34595109 gacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtc 34595208  T
Q  524 tgacaccg 531  Q
    ||||||||    
T  34595209 tgacaccg 34595216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 417 - 510
Target Start/End: Complemental strand, 5732602 - 5732508
Alignment:
Q  417 ggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    ||||||| |||||||||  |||| ||||| ||| |||||| | || |||||||||||||| ||| || |||||||| ||||||||||||||||||    
T  5732602 ggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcgga 5732508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 9025540 - 9025494
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  9025540 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 7377992 - 7378045
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||||||||||||| |||||||| |||||| |||||||||||||||||| ||||    
T  7377992 atttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacga 7378045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 462 - 510
Target Start/End: Complemental strand, 21924981 - 21924933
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  21924981 atttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcgga 21924933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 447 - 503
Target Start/End: Complemental strand, 30866205 - 30866149
Alignment:
Q  447 ccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcgg 503  Q
    ||||||||||| || |||||||||||||| |||||||| |||||| |||||||||||    
T  30866205 ccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 469 - 532
Target Start/End: Complemental strand, 12627616 - 12627553
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccga 532  Q
    ||||||| ||||||||||||||| |||||||||| ||||||| || | ||||||| ||||||||    
T  12627616 aaaatcacataattcagtgtaataatatgtgtcgatgtcggacaccacacatgtccgacaccga 12627553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 477 - 532
Target Start/End: Complemental strand, 26402711 - 26402656
Alignment:
Q  477 ataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccga 532  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||  ||||||||    
T  26402711 ataattcagtgtaatcacaagtgtcggtgtcggacacgatacatgttggacaccga 26402656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 9617447 - 9617493
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||||| |||||||| |||||| ||||||||||||||||    
T  9617447 atttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 26562702 - 26562748
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||    
T  26562702 atttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 26562748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 441 - 502
Target Start/End: Original strand, 10842524 - 10842585
Alignment:
Q  441 gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcg 502  Q
    |||| ||| |||||||| || |||||| ||||||| |||||| |||||||||||||||||||    
T  10842524 gacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcg 10842585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 13360418 - 13360373
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||||| ||||||||||||||| |||||| ||||||||    
T  13360418 atttgagaaaatcacataattcagtgtaattatatgtttcggtgtc 13360373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 34447450 - 34447360
Alignment:
Q  417 ggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||| |||||  ||||||||| ||||| |||||||||| | || |||||| |||||||||||||| ||||||||  | |||||||||||||    
T  34447450 ggacaccagacataacacagacaatgacacgccaacaccgttaataatttgataaaatcatataatttagtgtaat--tttgtgtcggtgtcg 34447360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 462 - 506
Target Start/End: Original strand, 7086808 - 7086852
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||    
T  7086808 atttgagaaaatcacataatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 462 - 502
Target Start/End: Complemental strand, 11591916 - 11591876
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcg 502  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  11591916 atttgagaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 440 - 508
Target Start/End: Complemental strand, 20371178 - 20371110
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||| ||| |||||||| || |||||||||||||| |||| ||| ||| || ||||||||||||||||    
T  20371178 tgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgtcg 20371110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 26178727 - 26178683
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||    
T  26178727 atttgataaaatcacataatttagtgtaatcatatgtgtcggtgt 26178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 426 - 508
Target Start/End: Original strand, 3398595 - 3398677
Alignment:
Q  426 acacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||| |||| ||||| ||| |||| ||| || |||||| ||||||||||||||||||||||| ||| || |||||||||    
T  3398595 acacgacacggacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaattataagtatcggtgtcg 3398677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 469 - 508
Target Start/End: Original strand, 7027262 - 7027301
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  7027262 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 440 - 507
Target Start/End: Original strand, 7938107 - 7938174
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    ||||| ||| |||| ||| || |||||| |||||||||||||| |||||||| ||| |||||||||||    
T  7938107 tgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 477 - 520
Target Start/End: Original strand, 18612649 - 18612692
Alignment:
Q  477 ataattcagtgtaatcatatgtgtcggtgtcggatacgatacat 520  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||    
T  18612649 ataattcaatgtaatcatatgtgttggtgtcagatacgatacat 18612692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 32298675 - 32298608
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||||||||| || |||| |||  |||| |||||| |||||||| |||||||| ||||||    
T  32298675 tgacatgccaacaccgctaataatttaagatcatcacataatttagtgtaattatatgtgttggtgtc 32298608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 7723296 - 7723250
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||    
T  7723296 atttgagaaaatcatataattcagcataattatatgtatcggtgtcg 7723250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 9024222 - 9024176
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||| | |||||||| |||||||||||||||| ||||||    
T  9024222 atttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcg 9024176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 9195800 - 9195754
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||| | |||||| |||||||| ||||||||||||||||    
T  9195800 atttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcg 9195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 134
Target Start/End: Original strand, 13326882 - 13326924
Alignment:
Q  92 ggagaaatcttcgatgcaggatgatccgaaagcttggaaatgg 134  Q
    ||||||||||| || ||||||| ||||||||||||||||||||    
T  13326882 ggagaaatctttgaagcaggatcatccgaaagcttggaaatgg 13326924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 426 - 507
Target Start/End: Original strand, 13851712 - 13851794
Alignment:
Q  426 acacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    ||||||||| |||| ||||| | | |||||||| || |||||||||||| |  |||||||||||||| |||||||||| ||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 13851794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 532
Target Start/End: Complemental strand, 26314680 - 26314610
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccga 532  Q
    |||||| |||||||||||||||| |||||| |||| |||||| ||| ||||||| || ||||  |||||||    
T  26314680 atttgaaaaaatcatataattcaatgtaattatatatgtcggggtcagatacgacacttgtccaacaccga 26314610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 28152118 - 28152180
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    ||||||| ||||||||||||||| | | |||||||||||||| |||| || |||| |||||||    
T  28152118 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccg 28152180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 478 - 508
Target Start/End: Original strand, 28862151 - 28862181
Alignment:
Q  478 taattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||||||||||||||||||||||    
T  28862151 taattcagtgtaatcatatgtgtcggtgtcg 28862181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 729 - 759
Target Start/End: Complemental strand, 29739150 - 29739120
Alignment:
Q  729 gagaaaattgtgagggatcaaattgggtcat 759  Q
    |||||||||||||||||||||||||||||||    
T  29739150 gagaaaattgtgagggatcaaattgggtcat 29739120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 4420225 - 4420180
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||| |||||||||||||||| |||| |||| ||||||    
T  4420225 atttgagaaaatgatataattcagtgtaaccataggtgttggtgtc 4420180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 508
Target Start/End: Complemental strand, 8365628 - 8365519
Alignment:
Q  400 ctatgaaacacgtatagggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgt 498  Q
    ||||||| |||| ||| |||||| ||||||||||| |||| ||||| ||| ||||  || || |||||| || |||| ||||||| ||||||| | | ||    
T  8365628 ctatgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagt 8365529  T
Q  499 gtcggtgtcg 508  Q
    ||||||||||    
T  8365528 gtcggtgtcg 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 19044477 - 19044522
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    ||||||||| |||| |||||||||||| || |||||||||||||||    
T  19044477 atttgagaatatcacataattcagtgttattatatgtgtcggtgtc 19044522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 19602227 - 19602194
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcata 495  Q
    |||||||||||| |||||||||||||||||||||    
T  19602227 atttgagaaaatgatataattcagtgtaatcata 19602194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 34895080 - 34895035
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||| ||| ||||||||||||||||| ||||| |||||    
T  34895080 atttgagaaaattatacaattcagtgtaatcataggtgtcagtgtc 34895035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 1e-22; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 654 - 757
Target Start/End: Original strand, 41444641 - 41444744
Alignment:
Q  654 gactaatttgtccttcatatcaaaatgtaagagactaatatgggttaattttttgtcggaactaaattgcgccgagagaaaattgtgagggatcaaattg 753  Q
    ||||||||||||||  |||| ||||||| ||  |||||| |||||| ||||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  41444641 gactaatttgtcctcaatataaaaatgttaggcactaatttgggtttattttttgtcggggctaaattgagccgagagaaaattgtgacggatcaaattg 41444740  T
Q  754 ggtc 757  Q
    ||||    
T  41444741 ggtc 41444744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 417 - 510
Target Start/End: Original strand, 8383224 - 8383318
Alignment:
Q  417 ggacactagacacgacacagacat-gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    ||||||| |||||||||| ||||| |||| ||| |||||||| || |||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  8383224 ggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcgga 8383318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 440 - 508
Target Start/End: Complemental strand, 8039903 - 8039835
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||| |||||||||||| || |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  8039903 tgacacgccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcg 8039835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 449 - 532
Target Start/End: Original strand, 45451553 - 45451636
Alignment:
Q  449 aacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccga 532  Q
    ||||| ||| || |||||||||||||| ||| |||||| |||| |||||||||||||||||| |||| ||||||| ||||||||    
T  45451553 aacactgctaataatttgagaaaatcacatacttcagtataataatatgtgtcggtgtcggacacgacacatgtccgacaccga 45451636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 459 - 529
Target Start/End: Original strand, 25093512 - 25093582
Alignment:
Q  459 atgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||||||||| || | ||||||| |||||    
T  25093512 atgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacac 25093582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 40993374 - 40993312
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    ||||||| ||||||||||||||| |||||||||||||||||| |||| ||||||| |||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccg 40993312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 450 - 515
Target Start/End: Complemental strand, 8789608 - 8789543
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||| |||||| |||||||||||||| ||||||| ||||||| |||||||||||||||||| ||||    
T  8789608 acacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacga 8789543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 450 - 510
Target Start/End: Original strand, 7928451 - 7928511
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||| || |||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  7928451 acaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcgga 7928511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 417 - 508
Target Start/End: Original strand, 10455757 - 10455849
Alignment:
Q  417 ggacactagacacgacacagacat-gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||| |||||||||||| ||| |||| |||||||| ||| || || |||||||||||||||| | |||||||| |||||||| |||||||    
T  10455757 ggacactggacacgacacaggcattgacacgccaacactgctaataatatgagaaaatcatataactaagtgtaattatatgtgttggtgtcg 10455849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 398 - 491
Target Start/End: Original strand, 25064857 - 25064951
Alignment:
Q  398 atctatgaaacacgtatagggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaat 491  Q
    ||||||||||||||  ||  |||||  ||||||||||||||| ||||| ||| |||||||| ||||||||| ||||||| |||||| ||||||||    
T  25064857 atctatgaaacacgggtacagacaccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaat 25064951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 425 - 530
Target Start/End: Complemental strand, 26492289 - 26492183
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtc 523  Q
    |||||||||| |||| ||||| ||| |||  ||| || |||||| ||||||||| ||||||||||||| | | || ||||||||||| |||| |||||||    
T  26492289 gacacgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcggacacgacacatgtc 26492190  T
Q  524 tgacacc 530  Q
    |||||||    
T  26492189 tgacacc 26492183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 20691332 - 20691377
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||| | |||||||||||||||||||||||||||||||    
T  20691332 atttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtc 20691377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 40150617 - 40150572
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||    
T  40150617 atttgagaaaatgatataattcaatgtaatcatatgtgtcggtgtc 40150572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 462 - 529
Target Start/End: Original strand, 10954965 - 10955032
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    |||||| ||||||| ||||||||||||||||| | |||||||||||||| |||| || |||| |||||    
T  10954965 atttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacac 10955032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 447 - 506
Target Start/End: Complemental strand, 17005680 - 17005621
Alignment:
Q  447 ccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    |||||||| || || |||||| ||||||||||||||||||||||| ||| ||||||||||    
T  17005680 ccaacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgt 17005621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 467 - 529
Target Start/End: Complemental strand, 13845566 - 13845504
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||||||| | ||| ||||||||| |||||||||||||||||| |||| || ||||||||||    
T  13845566 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgagacgtgtctgacac 13845504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 467 - 529
Target Start/End: Original strand, 35222956 - 35223018
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||||||| |||||||| |||||| |||||||||||||||||| | || || ||||||||||    
T  35222956 agaaaatcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacac 35223018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 452 - 510
Target Start/End: Complemental strand, 49505210 - 49505152
Alignment:
Q  452 accgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||| || |||||||||||||| |||||| |||||||| ||||||||| ||||||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcgga 49505152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 467 - 528
Target Start/End: Original strand, 2941576 - 2941637
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgaca 528  Q
    ||||||||| | ||| ||||||||| |||||||||||||||||| |||| || |||||||||    
T  2941576 agaaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgaca 2941637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 20503478 - 20503547
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    |||||| ||||| | ||||||||||||||| | | |||||||||| ||| |||| |||||||||||||||    
T  20503478 atttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccg 20503547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 440 - 501
Target Start/End: Complemental strand, 32804608 - 32804547
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtc 501  Q
    ||||||||| |||||| | || |||||||||||||| |||||| |||||||| |||||||||    
T  32804608 tgacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 419 - 483
Target Start/End: Original strand, 24633736 - 24633800
Alignment:
Q  419 acactagacacgacacagacatgacatgccaacaccgcttatgatttgagaaaatcatataattc 483  Q
    |||| ||||| ||||| ||||||||||||| ||||| || || |||||||||||||| |||||||    
T  24633736 acaccagacatgacacggacatgacatgccgacaccactaataatttgagaaaatcacataattc 24633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 462 - 502
Target Start/End: Original strand, 29508457 - 29508497
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcg 502  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  29508457 atttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 462 - 513
Target Start/End: Complemental strand, 4466646 - 4466595
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatac 513  Q
    |||| |||||||||||||||||||||||   ||||||| |||||||||||||    
T  4466646 atttaagaaaatcatataattcagtgtagctatatgtgccggtgtcggatac 4466595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 440 - 531
Target Start/End: Original strand, 7171493 - 7171583
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    ||||||||| |||| |||| | |||||| ||||||||||||||| ||||||| | | |||| ||||||||| |||| || |||| |||||||    
T  7171493 tgacatgccgacacagcttgtaatttga-aaaatcatataattcggtgtaattacaagtgttggtgtcggacacgacacgtgtccgacaccg 7171583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 467 - 510
Target Start/End: Original strand, 13414487 - 13414530
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||    
T  13414487 agaaaatcaaataattcaatgtaattatatgtgtcggtgtcgga 13414530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 477 - 508
Target Start/End: Complemental strand, 29386542 - 29386511
Alignment:
Q  477 ataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||||||||||||||||||||||||||    
T  29386542 ataattcagtgtaatcatatgtgtcggtgtcg 29386511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 462 - 529
Target Start/End: Original strand, 35160733 - 35160800
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||||| |||| | |||||||| ||||  |||||||||||||||| ||||| |||||| ||||||||    
T  35160733 atttgagtaaataacataattcaatgtagccatatgtgtcggtgtctgatacaatacatatctgacac 35160800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 10690320 - 10690266
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggt 504  Q
    |||||||| || || ||||||||||| ||||||||||||||| |||| |||||||    
T  10690320 acaccgctaataatctgagaaaatcacataattcagtgtaattatatttgtcggt 10690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 11251991 - 11252034
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||    
T  11251991 atttgagaaaatcacataattcagtgtaat--tatgtgtcggtgtc 11252034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 425 - 502
Target Start/End: Original strand, 11658790 - 11658868
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcg 502  Q
    ||||||||||||||| |||||  |||||| || | || |||||||||||||  |||||||||||| || ||||||||||    
T  11658790 gacacgacacagacactgacacaccaacatcgttaataatttgagaaaatcgcataattcagtgtgattatatgtgtcg 11658868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 515
Target Start/End: Original strand, 18426969 - 18427015
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    ||||||| ||||||| ||||||| |||| ||||||||||||||||||    
T  18426969 aaaatcacataattcggtgtaattatatatgtcggtgtcggatacga 18427015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 528
Target Start/End: Complemental strand, 23272040 - 23271974
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgaca 528  Q
    |||||||||| | | |||||| | ||||||||||||||||||||| ||| ||||||| | |||||||    
T  23272040 atttgagaaactgacataattgaatgtaatcatatgtgtcggtgttggacacgatacgtatctgaca 23271974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 496
Target Start/End: Complemental strand, 29112326 - 29112292
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatat 496  Q
    |||||||||||||||||||||||||||||| ||||    
T  29112326 atttgagaaaatcatataattcagtgtaattatat 29112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 532
Target Start/End: Original strand, 55401088 - 55401158
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccga 532  Q
    |||||| ||||||| |||||| |||||||| | | |||||||||||||| |||| || |||| ||||||||    
T  55401088 atttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccga 55401158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 477 - 530
Target Start/End: Original strand, 3631712 - 3631765
Alignment:
Q  477 ataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacacc 530  Q
    ||||||||||||||| ||||||| | |||||||| |||| ||||||| ||||||    
T  3631712 ataattcagtgtaattatatgtgccagtgtcggacacgacacatgtccgacacc 3631765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 13807182 - 13807227
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||||| |||||||| | |||| |||||||||||||||    
T  13807182 atttgagaaaatcacataattcaatataataatatgtgtcggtgtc 13807227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 20141109 - 20141177
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    |||||||||| | | |||||| | |||||||||||||||| ||||| || ||||||||| ||||||||||    
T  20141109 atttgagaaactgacataattgaatgtaatcatatgtgtc-gtgtcagacacgatacatatctgacaccg 20141177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 509
Target Start/End: Original strand, 38731221 - 38731278
Alignment:
Q  452 accgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgg 509  Q
    |||||| || |||| | ||||||| ||||||||||||| | |||||||||||||||||    
T  38731221 accgctaataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcgg 38731278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 2e-18; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 449 - 529
Target Start/End: Complemental strand, 30502447 - 30502367
Alignment:
Q  449 aacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||||||| || ||||||||||||||  |||||||||||||| |||||||||||||||||| |||| ||||||| |||||    
T  30502447 aacaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacac 30502367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 449 - 529
Target Start/End: Complemental strand, 30542790 - 30542710
Alignment:
Q  449 aacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||||||| || ||||||||||||||  |||||||||||||| |||||||||||||||||| |||| ||||||| |||||    
T  30542790 aacaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacac 30542710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 417 - 530
Target Start/End: Original strand, 26312736 - 26312850
Alignment:
Q  417 ggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    ||||||| |||||||||  |||| ||| ||||| | |||||  || ||||||||||||||  |||||||||||||| |||||| ||||||||||| ||||    
T  26312736 ggacactggacacgacatggacactgatatgccgataccgcaaataatttgagaaaatcaattaattcagtgtaattatatgtatcggtgtcggacacga 26312835  T
Q  516 tacatgtctgacacc 530  Q
    ||| |||||||||||    
T  26312836 tacgtgtctgacacc 26312850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 440 - 530
Target Start/End: Complemental strand, 28588742 - 28588652
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacacc 530  Q
    ||||| ||| |||||| | || |||||||||||||| ||||||||||||||| ||| |||||||||||||| |||| |||| |||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacacgacacatatctgacacc 28588652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 23012454 - 23012385
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    ||||||||||||||||||||| | |||||| |||||||||||||| ||| |||| |||||||||||||||    
T  23012454 atttgagaaaatcatataatttaatgtaattatatgtgtcggtgttggacacgacacatgtctgacaccg 23012385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 440 - 508
Target Start/End: Original strand, 3966494 - 3966562
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||| |||||||| || |||||||||||||| | ||||||||||||| ||||||||||||||||    
T  3966494 tgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 462 - 510
Target Start/End: Original strand, 34879363 - 34879411
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  34879363 atttgagaaaatcatataattcagtgtaataatatgtgtcgatgtcgga 34879411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 424 - 506
Target Start/End: Complemental strand, 15410533 - 15410450
Alignment:
Q  424 agacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    ||||||||||| |||| ||||| ||| |||||||| || |||| ||||||| |||| ||||||||||||||||||||| |||||    
T  15410533 agacacgacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgttggtgt 15410450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 434 - 508
Target Start/End: Complemental strand, 41091334 - 41091257
Alignment:
Q  434 cagacatgacatgcca---acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||||||| ||   |||| ||| ||||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  41091334 cagacatgacatgacacggacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 41091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 425 - 510
Target Start/End: Complemental strand, 21191140 - 21191054
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||||| |||| ||||||||| |||| ||| || |||||| ||||||| ||||||||||||||| | | ||||||||||||||    
T  21191140 gacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgga 21191054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 462 - 528
Target Start/End: Complemental strand, 32630781 - 32630715
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgaca 528  Q
    |||||||||||| |||||||||| |||||| ||||||||| ||||||||||||| || |||| ||||    
T  32630781 atttgagaaaattatataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtccgaca 32630715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 440 - 501
Target Start/End: Complemental strand, 12264897 - 12264836
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtc 501  Q
    |||||||||||||||||| || |||||||||||| | || |||||||||||| |||||||||    
T  12264897 tgacatgccaacaccgctaattatttgagaaaattacatgattcagtgtaattatatgtgtc 12264836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 462 - 523
Target Start/End: Complemental strand, 18421887 - 18421826
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtc 523  Q
    |||||||||||||| ||||| ||||||||| ||||||||||| |||||| |||| |||||||    
T  18421887 atttgagaaaatcacataatccagtgtaattatatgtgtcggcgtcggacacgacacatgtc 18421826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 440 - 508
Target Start/End: Original strand, 11685930 - 11685998
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||| |||||||| || |||||||||| ||  |||||| |||||||| ||||||||||||||||    
T  11685930 tgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcg 11685998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 442 - 510
Target Start/End: Complemental strand, 16203861 - 16203793
Alignment:
Q  442 acatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    ||||||| |||| ||| || |||||||||||||  |||||| |||||||| ||||||||||||||||||    
T  16203861 acatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcgga 16203793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 477 - 529
Target Start/End: Complemental strand, 30099069 - 30099017
Alignment:
Q  477 ataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||||| ||||||| ||||||||||||||||||||||| || ||||||||||    
T  30099069 ataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgtctgacac 30099017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 446 - 529
Target Start/End: Complemental strand, 21576807 - 21576724
Alignment:
Q  446 gccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    |||||||| ||| || |||||| ||||||| ||||||||||||||| | | |||||| ||||||| |||| || ||||||||||    
T  21576807 gccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacac 21576724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 6471935 - 6471889
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||    
T  6471935 atttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcg 6471889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 440 - 506
Target Start/End: Original strand, 23220974 - 23221040
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    ||||||| | |||||||| || |||||| ||||||| |||||| ||||| |||||||||||||||||    
T  23220974 tgacatgtcgacaccgctaataatttgataaaatcacataatttagtgttatcatatgtgtcggtgt 23221040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 450 - 508
Target Start/End: Original strand, 36838544 - 36838602
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||| || |||||||||||| | |||||| |||||||| ||||||||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcg 36838602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 467 - 525
Target Start/End: Original strand, 42029770 - 42029828
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctg 525  Q
    ||||||||| |||||||| |||||| |||||| ||||||||||| |||| |||||||||    
T  42029770 agaaaatcacataattcaatgtaattatatgtatcggtgtcggacacgacacatgtctg 42029828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 440 - 529
Target Start/End: Original strand, 17123039 - 17123128
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||| |||||||||||| || |||||||||||||| |||||  |||  ||| |||| ||||||||| ||| |||| ||||||| |||||    
T  17123039 tgacacgccaacaccgctaataatttgagaaaatcacataatcaagtacaattatatatgtcggtgttggacacgaaacatgtccgacac 17123128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 418 - 491
Target Start/End: Original strand, 27932204 - 27932277
Alignment:
Q  418 gacactagacacgacacagacatgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaat 491  Q
    ||||| ||||||||||| |||| | || ||| |||||||| || |||||||||||| | |||||||||||||||    
T  27932204 gacacaagacacgacactgacacgccacgccgacaccgctaataatttgagaaaattacataattcagtgtaat 27932277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 466 - 510
Target Start/End: Original strand, 2548404 - 2548448
Alignment:
Q  466 gagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||    
T  2548404 gagaaaattacataattcagtgtaatcataagtgtcggtgtcgga 2548448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 440 - 508
Target Start/End: Original strand, 6035474 - 6035541
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||| ||| |||||||| || |||||||||| | ||||||||||||||||| |||| |||||||||||    
T  6035474 tgacacgccgacaccgctaataatttgagaaa-taatataattcagtgtaattatatttgtcggtgtcg 6035541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 462 - 513
Target Start/End: Complemental strand, 2577226 - 2577175
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatac 513  Q
    |||||||||||| | |||||| |||||||||||||||  |||||||||||||    
T  2577226 atttgagaaaatgacataatttagtgtaatcatatgttccggtgtcggatac 2577175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 17925218 - 17925172
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||| ||||||||| |||||||| |||||| ||||||||||||||||    
T  17925218 atttaagaaaatcacataattcaatgtaataatatgtgtcggtgtcg 17925172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 39205893 - 39205939
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||||||||||||  ||||||| |||||||| |||||||    
T  39205893 atttgagaaaatcatataattaggtgtaattatatgtgttggtgtcg 39205939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 8325110 - 8325065
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||| ||||||||| |||||| || |||||||||||||    
T  8325110 atttgagaaaatgatataattctgtgtaaacacatgtgtcggtgtc 8325065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 12927667 - 12927712
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    ||||||||||||||||||||| |||||||| |||| |||| |||||    
T  12927667 atttgagaaaatcatataatttagtgtaattatatatgtcagtgtc 12927712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 14873530 - 14873575
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    ||||||||||| || |||||| |||||||| |||||||||||||||    
T  14873530 atttgagaaaagcacataatttagtgtaattatatgtgtcggtgtc 14873575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 15086484 - 15086529
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    ||||||||||||||||||||  | |||||| |||||||||||||||    
T  15086484 atttgagaaaatcatataatgtaatgtaattatatgtgtcggtgtc 15086529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 21194169 - 21194100
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    |||||||||||||| || |||||||||||| ||| || | ||||| ||| |||| ||||||| |||||||    
T  21194169 atttgagaaaatcacatcattcagtgtaattataggtattggtgttggacacgacacatgtcagacaccg 21194100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 21194251 - 21194198
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||||||||||||| ||||||||||||||||||  ||||  |||||||| ||||    
T  21194251 atttgagaaaatcacataattcagtgtaatcattggtgttagtgtcggacacga 21194198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 499
Target Start/End: Complemental strand, 24273076 - 24273039
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtg 499  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  24273076 atttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 499
Target Start/End: Original strand, 24389138 - 24389175
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtg 499  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  24389138 atttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 467 - 504
Target Start/End: Original strand, 39758290 - 39758327
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggt 504  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  39758290 agaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 7e-18; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 424 - 510
Target Start/End: Original strand, 9709794 - 9709881
Alignment:
Q  424 agacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    ||||||||||| |||| ||||||||| |||||||| || |||||||||||||| |||||||  |||||| ||||||||||||||||||    
T  9709794 agacacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcgga 9709881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 440 - 529
Target Start/End: Original strand, 36878452 - 36878541
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||| ||| |||||||| || |||||||||||||| ||||||||||||||| ||| ||||||||||| || |||| ||||||| |||||    
T  36878452 tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacacgaaacatgtccgacac 36878541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 453 - 508
Target Start/End: Original strand, 44482234 - 44482289
Alignment:
Q  453 ccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 44482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 450 - 508
Target Start/End: Complemental strand, 20157408 - 20157350
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||| || || ||||||||||| ||||||||||||||||||||||||||||||||    
T  20157408 acaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcg 20157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 38503321 - 38503378
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||| || |||||||||||||||||| ||||||||||| |||||||||||||||    
T  38503321 acaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 440 - 508
Target Start/End: Original strand, 6427341 - 6427409
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||| |||||||||||| || |||||||||||||| |||||||| |||||| |||||||| |||||||    
T  6427341 tgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcg 6427409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 436 - 515
Target Start/End: Complemental strand, 14332714 - 14332635
Alignment:
Q  436 gacatgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||| |||||||| ||||| || || |||||||||||||| |||||| |||||||| |||||| ||||||||||| ||||    
T  14332714 gacacgacatgcccacaccactaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggacacga 14332635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 440 - 502
Target Start/End: Complemental strand, 17831599 - 17831537
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcg 502  Q
    ||||| ||| |||||||| || |||||||||||||| || |||||||||||||||||||||||    
T  17831599 tgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcg 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 11605981 - 11605912
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    |||||| ||||||||||||||||||| ||| | |||||| ||| || |||| ||||||||||||||||||    
T  11605981 atttgaaaaaatcatataattcagtgaaattacatgtgttggtatcagatatgatacatgtctgacaccg 11605912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 19637781 - 19637850
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    |||| ||||||| | || ||||| ||||||||||||||||||||||||| ||||||||| || |||||||    
T  19637781 atttaagaaaatgacattattcaatgtaatcatatgtgtcggtgtcggacacgatacatatccgacaccg 19637850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 447 - 508
Target Start/End: Complemental strand, 40285715 - 40285654
Alignment:
Q  447 ccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||||| || |||||||||||||  ||||||||||||| |||||||||||| |||||    
T  40285715 ccaacaccgctaataatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtcg 40285654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 469 - 510
Target Start/End: Original strand, 52903269 - 52903310
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  52903269 aaaatcatataattcagtgtaattatatgtgtcggtgtcgga 52903310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 1864926 - 1864882
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  1864926 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 425 - 508
Target Start/End: Complemental strand, 7918295 - 7918211
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||||||||| ||||| ||  ||| | || || |||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  7918295 gacacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcg 7918211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 441 - 529
Target Start/End: Original strand, 21530681 - 21530769
Alignment:
Q  441 gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    |||| ||| |||||| | || |||||||||||||||||||||  || |||| ||| |||||||||||||| |||| ||||||| |||||    
T  21530681 gacacgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacgacacatgtccgacac 21530769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 464 - 508
Target Start/End: Original strand, 34371728 - 34371772
Alignment:
Q  464 ttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||    
T  34371728 ttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 34371772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 462 - 510
Target Start/End: Complemental strand, 38076016 - 38075968
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    ||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  38076016 atttgagtaaatcacataagtcagtgtaatcatatgtgtcggtgtcgga 38075968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 462 - 510
Target Start/End: Original strand, 40181884 - 40181932
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  40181884 atttgagaaaatcacataattcagtgtaattatatgtatcggtgtcgga 40181932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 440 - 532
Target Start/End: Complemental strand, 46348451 - 46348359
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccga 532  Q
    ||||| ||| |||| ||| || |||||| |||||||||||||| |||||||| | | |||||||||||||| |||| || |||| ||||||||    
T  46348451 tgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccga 46348359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 440 - 523
Target Start/End: Original strand, 13997874 - 13997957
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtc 523  Q
    ||||| ||| |||||| | || |||| | ||||||| ||||||||||||||| |||||||||||||| ||| |||| |||||||    
T  13997874 tgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgttggagacgacacatgtc 13997957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 441 - 500
Target Start/End: Complemental strand, 25098622 - 25098563
Alignment:
Q  441 gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgt 500  Q
    |||| ||| |||||||| || |||||||||||||| ||||||||||||||| ||||||||    
T  25098622 gacaagccgacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 441 - 507
Target Start/End: Complemental strand, 25452215 - 25452151
Alignment:
Q  441 gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    ||||||||||||| ||| || |||||||||||||  |||||||||||||||  ||||||||||||||    
T  25452215 gacatgccaacactgctaataatttgagaaaatctcataattcagtgtaat--tatgtgtcggtgtc 25452151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 467 - 510
Target Start/End: Original strand, 30749858 - 30749901
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgga 30749901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 467 - 510
Target Start/End: Original strand, 30771309 - 30771352
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgga 30771352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 450 - 508
Target Start/End: Complemental strand, 9629958 - 9629900
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||| || |||||| |||||||||||||||||||| || ||| ||||||||||||    
T  9629958 acaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcg 9629900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 25361899 - 25361945
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  25361899 atttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcg 25361945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 425 - 501
Target Start/End: Complemental strand, 398849 - 398772
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtc 501  Q
    |||||||||| |||| ||||| ||| |||||||| || |||||| ||||||| ||||||||||||||| ||| |||||    
T  398849 gacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 16927231 - 16927178
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||||| ||||||||||||||||||||||| |||| ||| |||||| |||||||    
T  16927231 atttgaaaaaatcatataattcagtgtaattatatatgttggtgtcagatacga 16927178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 436 - 508
Target Start/End: Original strand, 9828031 - 9828103
Alignment:
Q  436 gacatgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||| |||| ||| ||||| || || |||||| ||||||| |||||||||||||||  |||||||||||||||    
T  9828031 gacacgacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcg 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 462 - 510
Target Start/End: Complemental strand, 39130813 - 39130765
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||| ||||||| |||||||| |||||||| ||||||||||||||||||    
T  39130813 attttagaaaattatataatttagtgtaattatatgtgtcggtgtcgga 39130765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 450 - 510
Target Start/End: Complemental strand, 39953204 - 39953144
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||| || |||| ||||||||| |||||| ||||||||  |||||||||||||||||    
T  39953204 acaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcgga 39953144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 2896189 - 2896122
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    ||||| ||| |||||||| || |||||||||||||| |||||||||||||   |||| ||||||||||    
T  2896189 tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtc 2896122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 425 - 507
Target Start/End: Complemental strand, 5898350 - 5898267
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||| |||||||||| ||| | ||| |||||||| || || ||| ||||||| ||||||||||||||| ||||| |||||||||    
T  5898350 gacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtc 5898267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 447 - 506
Target Start/End: Original strand, 10233251 - 10233310
Alignment:
Q  447 ccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    |||||||| || || | |||||||||||| ||||||||||||||| ||||||||| ||||    
T  10233251 ccaacaccactaataaattgagaaaatcacataattcagtgtaattatatgtgtctgtgt 10233310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 468 - 531
Target Start/End: Complemental strand, 29163421 - 29163358
Alignment:
Q  468 gaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    |||||||| |||||||| | |||| |||||||||||||||||| |||| || || |||||||||    
T  29163421 gaaaatcacataattcaatttaattatatgtgtcggtgtcggacacgacacgtgcctgacaccg 29163358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 424 - 510
Target Start/End: Complemental strand, 41877555 - 41877468
Alignment:
Q  424 agacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||||||||||| ||  | ||| |||||||| || |||||||||||| | |||||| |||||||| | | ||||||||||||||    
T  41877555 agacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcgga 41877468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 469 - 508
Target Start/End: Complemental strand, 48148076 - 48148037
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  48148076 aaaatcatataattcagtgtaattatatatgtcggtgtcg 48148037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 1486755 - 1486709
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||| ||||||| ||||||||||||||| ||| ||||||||||||    
T  1486755 atttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 1815277 - 1815339
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    ||||||| ||||||||||||||| | | ||||||||||| || |||| ||||||| |||||||    
T  1815277 aaaatcacataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccg 1815339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 440 - 506
Target Start/End: Complemental strand, 10572657 - 10572591
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    ||||| ||| ||||| || || |||||||||||||| ||||||| ||||||| | ||||||||||||    
T  10572657 tgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgt 10572591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 532
Target Start/End: Complemental strand, 22515933 - 22515863
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccga 532  Q
    |||||| ||||||| |||||| |||||||| | | |||||||||||||| |||| |||| || ||||||||    
T  22515933 atttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacaccga 22515863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 25272495 - 25272541
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||||| |||||| |||||||| ||| ||||||||||||    
T  25272495 atttgagaaaatcacataatttagtgtaattataagtgtcggtgtcg 25272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 463 - 513
Target Start/End: Original strand, 43966820 - 43966870
Alignment:
Q  463 tttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatac 513  Q
    ||||||||||| ||| |||||| |||||||| |||||| ||||||||||||    
T  43966820 tttgagaaaatgatacaattcaatgtaatcacatgtgttggtgtcggatac 43966870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 477 - 525
Target Start/End: Original strand, 14248856 - 14248902
Alignment:
Q  477 ataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctg 525  Q
    |||||||||||||||  |||||||| |||||||| ||||||||||||||    
T  14248856 ataattcagtgtaat--tatgtgtcagtgtcggacacgatacatgtctg 14248902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 503
Target Start/End: Original strand, 14443178 - 14443219
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcgg 503  Q
    |||||||||||| || ||||||| ||||||||||||||||||    
T  14443178 atttgagaaaatgatttaattcattgtaatcatatgtgtcgg 14443219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 499
Target Start/End: Original strand, 19324575 - 19324612
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtg 499  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  19324575 atttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 23636095 - 23636050
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||| | |||||||||||||||  ||||||||||||||    
T  23636095 atttgagaaaattacataattcagtgtaattgtatgtgtcggtgtc 23636050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 28273134 - 28273089
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||| ||||||||||||||||||||||| | | |||||||||||    
T  28273134 atttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 500
Target Start/End: Original strand, 36905995 - 36906048
Alignment:
Q  447 ccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgt 500  Q
    ||||||||||| || || ||||||||||| ||||||||| ||||| ||||||||    
T  36905995 ccaacaccgctaataatctgagaaaatcacataattcagagtaattatatgtgt 36906048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 43492540 - 43492471
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    ||||||||||||||  |||||| ||||||| || |||||||||||| || || | ||||||| |||||||    
T  43492540 atttgagaaaatcacgtaattcggtgtaattatgtgtgtcggtgtcagacacaacacatgtccgacaccg 43492471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 4e-16; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 462 - 530
Target Start/End: Complemental strand, 33405430 - 33405362
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacacc 530  Q
    ||||||||||| || |||||| |||||||| |||||||||||||||||| |||| ||||||||||||||    
T  33405430 atttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggacacgacacatgtctgacacc 33405362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 4786384 - 4786331
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  4786384 atttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcggatacga 4786331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 450 - 510
Target Start/End: Original strand, 34897086 - 34897146
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||| || |||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  34897086 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgga 34897146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 462 - 529
Target Start/End: Original strand, 3025564 - 3025631
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    |||||||||||||| ||||||||||||||| ||| ||||| |||||||| |||| || ||||||||||    
T  3025564 atttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacacgacacgtgtctgacac 3025631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 12606875 - 12606830
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  12606875 atttgagaaaatcatataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 441 - 510
Target Start/End: Complemental strand, 13844663 - 13844594
Alignment:
Q  441 gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||| ||| |||| ||| || |||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  13844663 gacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcgga 13844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 462 - 510
Target Start/End: Original strand, 12985405 - 12985453
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||||||    
T  12985405 atttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcgga 12985453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 462 - 501
Target Start/End: Complemental strand, 26418388 - 26418349
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtc 501  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  26418388 atttgagaaaatcatattattcagtgtaatcatatgtgtc 26418349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 441 - 516
Target Start/End: Complemental strand, 31236644 - 31236569
Alignment:
Q  441 gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgat 516  Q
    |||| ||| |||| ||| || |||||||||||||| |||||||| |||||| ||||||||||||| |||| |||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacacgat 31236569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 11927132 - 11927086
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  11927132 atttgataaaatcacataattcagtgtaattatatgtgtcggtgtcg 11927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 428 - 501
Target Start/End: Complemental strand, 24362283 - 24362209
Alignment:
Q  428 acgacacagacat-gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtc 501  Q
    ||||||||||||  |||| ||| |||||||| || |||||||| ||||| ||||||||||||||| |||||||||    
T  24362283 acgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 12559152 - 12559107
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||    
T  12559152 atttgagaaaatgatataattcagtgtaatcatatgtattggtgtc 12559107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 14134712 - 14134757
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||||| ||||||||||||||| |||| ||||||||||    
T  14134712 atttgagaaaatcacataattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 467 - 508
Target Start/End: Complemental strand, 26902216 - 26902175
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 26902175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 417 - 524
Target Start/End: Complemental strand, 37283902 - 37283796
Alignment:
Q  417 ggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||||| ||||| ||||| |||| ||||||||   ||||||| || || ||||||||||| |||||||||||||||  ||||||||||||| ||| ||||    
T  37283902 ggacaccagacatgacacggacactgacatgcgggcaccgctaataatctgagaaaatcacataattcagtgtaat--tatgtgtcggtgtgggacacga 37283805  T
Q  516 tacatgtct 524  Q
     || |||||    
T  37283804 cacgtgtct 37283796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 39954346 - 39954282
Alignment:
Q  441 gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtg 505  Q
    |||| ||| |||||||| || |||||||||||||| |||||| |||||||| ||||||| |||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacggtg 39954282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 479 - 531
Target Start/End: Complemental strand, 44462224 - 44462172
Alignment:
Q  479 aattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    |||||| | |||||||||||||||||||| || |||||||||||| |||||||    
T  44462224 aattcaatttaatcatatgtgtcggtgtcagacacgatacatgtccgacaccg 44462172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 479 - 531
Target Start/End: Complemental strand, 44469757 - 44469705
Alignment:
Q  479 aattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    |||||| | |||||||||||||||||||| || |||||||||||| |||||||    
T  44469757 aattcaatttaatcatatgtgtcggtgtcagacacgatacatgtccgacaccg 44469705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 425 - 531
Target Start/End: Complemental strand, 926872 - 926765
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtc 523  Q
    |||||||||| |||| ||||| ||||||||  || || |||||||||||||  ||  ||||||||||| ||| ||||||||||||||  ||| || ||||    
T  926872 gacacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataagtgtcggtgtcggacgcgacacgtgtc 926773  T
Q  524 tgacaccg 531  Q
     |||||||    
T  926772 cgacaccg 926765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 450 - 505
Target Start/End: Original strand, 4611535 - 4611590
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtg 505  Q
    |||||||| || |||||||||||| | ||||||||||||||| |||||| ||||||    
T  4611535 acaccgctaataatttgagaaaataacataattcagtgtaattatatgtctcggtg 4611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 462 - 513
Target Start/End: Original strand, 7658476 - 7658527
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatac 513  Q
    |||||||||||| | ||||||||||||||| |||| ||||||||| ||||||    
T  7658476 atttgagaaaattacataattcagtgtaattatatttgtcggtgttggatac 7658527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 20679463 - 20679396
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    ||||||| | ||||| || || |||||||||||||| ||| ||||||||||| ||| |||||||||||    
T  20679463 tgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 470 - 508
Target Start/End: Original strand, 8847277 - 8847315
Alignment:
Q  470 aaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 11944678 - 11944724
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||| ||||||| |||| |||||||||| ||||||||||||||||    
T  11944678 atttgataaaatcacataactcagtgtaattatatgtgtcggtgtcg 11944724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 532
Target Start/End: Original strand, 20873082 - 20873152
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccga 532  Q
    |||||| ||||||| |||||| |||||||| | | |||||||||||||| ||||||| |||| || |||||    
T  20873082 atttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgtccgataccga 20873152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 4948665 - 4948718
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||||| ||||||| ||||||||||||||| | | |||||||||||||| ||||    
T  4948665 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 4948718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 20785529 - 20785472
Alignment:
Q  444 atgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtc 501  Q
    |||||||||||||| || ||||||| |||||| |||||| | |||||| |||||||||    
T  20785529 atgccaacaccgctaataatttgaggaaatcacataatttaatgtaattatatgtgtc 20785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 506
Target Start/End: Original strand, 22493514 - 22493551
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  22493514 aaaatcacataattcagtgtaatcatatatgtcggtgt 22493551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 38079012 - 38079081
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    |||| ||||||||| || |||||||||||| ||||| |||| ||||||| ||||  |||||| |||||||    
T  38079012 atttaagaaaatcacatgattcagtgtaattatatgcgtcgatgtcggacacgacgcatgtccgacaccg 38079081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 40332204 - 40332257
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||||||||||||| ||||||||||||||| | | |||||||||| ||| ||||    
T  40332204 atttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacga 40332257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 468 - 529
Target Start/End: Complemental strand, 43737851 - 43737790
Alignment:
Q  468 gaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    |||||||| | ||| ||||||||| |||||||||||||||||| |||| |  ||||||||||    
T  43737851 gaaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacaggtgtctgacac 43737790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 450 - 528
Target Start/End: Original strand, 20549792 - 20549870
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgaca 528  Q
    |||||||| || ||||||||||||||  |||||||||||||| |||||||||||||||||| || | ||||||| ||||    
T  20549792 acaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgaca 20549870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 467 - 529
Target Start/End: Original strand, 39138462 - 39138524
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||| ||||    
T  39138462 agaaaatcacataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacac 39138524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 5548671 - 5548735
Alignment:
Q  444 atgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||| |||||||| || |||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  5548671 atgccgacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcg 5548735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 23128707 - 23128663
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  23128707 atttgagaaaaccatataattcagtgtaatcatatgtgtcggtgt 23128663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 508
Target Start/End: Complemental strand, 22602793 - 22602710
Alignment:
Q  426 acacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||||| || ||||| ||| ||||||   || |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  22602793 acacgacacaggcactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 22602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 15902797 - 15902879
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    ||||||||||||||| ||||||||| |||||  | || |||||| ||||||| |||||| |||||||| ||||||||||||||    
T  15902797 gacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgt 15902879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 418 - 515
Target Start/End: Original strand, 26733272 - 26733370
Alignment:
Q  418 gacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    ||||| ||||||||||| |||| ||||| | | |||||||| || |||||| ||||||| |||||||||| |||| | |||||||||||||||| ||||    
T  26733272 gacaccagacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcggacacga 26733370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 422 - 505
Target Start/End: Complemental strand, 3520430 - 3520345
Alignment:
Q  422 ctagacac-gacacagacat-gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtg 505  Q
    |||||||| ||||||||||| |||| ||  |||||| | || ||||||||||||||||||||||| |||||| |||||||||||||    
T  3520430 ctagacacagacacagacattgacacgctgacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtgtcggtg 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 508
Target Start/End: Original strand, 27944991 - 27945100
Alignment:
Q  400 ctatgaaacacgtatagggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgt 498  Q
    ||||||| |||| ||| ||||||  |||||||||| |||| ||||| ||| ||||| || || |||||||||||| | ||||||||||||||| | | ||    
T  27944991 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagt 27945090  T
Q  499 gtcggtgtcg 508  Q
    ||||||||||    
T  27945091 gtcggtgtcg 27945100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 462 - 510
Target Start/End: Original strand, 9482947 - 9482995
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||||||||| | ||||||||||||| ||||||||||||||||||    
T  9482947 atttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgga 9482995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 462 - 530
Target Start/End: Original strand, 21880165 - 21880233
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacacc 530  Q
    |||||||||||| | ||||||||||||||| | | |||||||||||||| |||| ||||||| ||||||    
T  21880165 atttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacacc 21880233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 26329474 - 26329382
Alignment:
Q  417 ggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||| ||||||||||||||| ||||| ||| ||| || | || ||||||||||| || | ||||||||||||| ||||||||||| ||||    
T  26329474 ggacactggacacgacacagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcg 26329382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 440 - 508
Target Start/End: Original strand, 32308111 - 32308179
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||| ||| |||||||| || |||||||||||||| |||||||||||||||  |||||||| ||||||    
T  32308111 tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcg 32308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 469 - 508
Target Start/End: Original strand, 18226964 - 18227003
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  18226964 aaaatcatataattcagtataatcatatgtgtcggtgtcg 18227003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 464 - 506
Target Start/End: Complemental strand, 3142122 - 3142080
Alignment:
Q  464 ttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    ||||| ||||||||||||||| |||||||||||||||||||||    
T  3142122 ttgagtaaatcatataattcaatgtaatcatatgtgtcggtgt 3142080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 462 - 520
Target Start/End: Original strand, 4909164 - 4909222
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacat 520  Q
    |||||||||||| | |||||||| |||||||||||||||| |||||||| || ||||||    
T  4909164 atttgagaaaattacataattcattgtaatcatatgtgtcagtgtcggacacaatacat 4909222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 470 - 515
Target Start/End: Original strand, 640134 - 640179
Alignment:
Q  470 aaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||||    
T  640134 aaatcacataattcagtgtaattatatgtgtcggtgtcagatacga 640179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 19206051 - 19206108
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||| || |||||||||||||| |||||||| | |||| |||||||||||||||    
T  19206051 acaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtc 19206108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 468 - 529
Target Start/End: Original strand, 25956464 - 25956525
Alignment:
Q  468 gaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    |||||| | |||||||| |||||||| | |||||||||||||| |||||||||||| |||||    
T  25956464 gaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacatgtcggacac 25956525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 417 - 508
Target Start/End: Original strand, 30731004 - 30731094
Alignment:
Q  417 ggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||| |||||||||||| ||| || || ||| |||||||  || |||||||||||||| |||||||||||||||  | |||||||||||||    
T  30731004 ggacaccagacacgacacatacagtggcacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaat--tgtgtgtcggtgtcg 30731094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 462 - 510
Target Start/End: Original strand, 3721106 - 3721154
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||||||||| |||||| ||| |||| ||||||||||||||||||    
T  3721106 atttgagaaaatcacataatttagtataattatatgtgtcggtgtcgga 3721154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 463 - 507
Target Start/End: Original strand, 5835261 - 5835305
Alignment:
Q  463 tttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    ||||||||||| | ||||||||||||||| |||||||||||||||    
T  5835261 tttgagaaaataacataattcagtgtaattatatgtgtcggtgtc 5835305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 467 - 515
Target Start/End: Complemental strand, 18213074 - 18213026
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    ||||||||| |||||| |||||||| |||||||||||||||||| ||||    
T  18213074 agaaaatcacataatttagtgtaattatatgtgtcggtgtcggacacga 18213026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 429 - 528
Target Start/End: Original strand, 22484004 - 22484104
Alignment:
Q  429 cgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgac 527  Q
    ||||||||||| ||||| ||| |||||||| || |||| |||||||   |||||||||| |||| ||||||||||||||| || | || ||||||| |||    
T  22484004 cgacacagacactgacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtcagacatgacacatgtccgac 22484103  T
Q  528 a 528  Q
    |    
T  22484104 a 22484104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 450 - 510
Target Start/End: Complemental strand, 32287521 - 32287461
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||| || || ||||||||||| ||||||||||| ||  ||||||||||||||||||    
T  32287521 acaccgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcggtgtcgga 32287461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 426 - 508
Target Start/End: Original strand, 1433430 - 1433513
Alignment:
Q  426 acacgacacagacat-gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||| ||||| |||| ||| |||||| | || |||||||||||||| || |||  ||||||| ||||||||||||||||    
T  1433430 acacgacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcg 1433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 463 - 530
Target Start/End: Complemental strand, 5937466 - 5937399
Alignment:
Q  463 tttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacacc 530  Q
    ||||||||||| | |||||||| |||||||| | ||||| |||||||  |||||||||||| ||||||    
T  5937466 tttgagaaaatgacataattcaatgtaatcacaagtgtctgtgtcggtcacgatacatgtcggacacc 5937399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 469 - 532
Target Start/End: Original strand, 15680829 - 15680892
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccga 532  Q
    ||||||| |||||| |||||||| ||| |||||||||||||| |||| || |||| ||||||||    
T  15680829 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccga 15680892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 462 - 513
Target Start/End: Complemental strand, 21568668 - 21568617
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatac 513  Q
    |||| ||||||||  |||||| |||||||||||||| |||||||||||||||    
T  21568668 atttaagaaaatctcataattaagtgtaatcatatgagtcggtgtcggatac 21568617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 7328737 - 7328691
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||| | |||||| |||||||| ||||||||||||||||    
T  7328737 atttgagaaaataacataatttagtgtaattatatgtgtcggtgtcg 7328691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 16341509 - 16341555
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||||| |||||| |||||||| ||||||| ||||||||    
T  16341509 atttgagaaaatcacataattaagtgtaattatatgtgccggtgtcg 16341555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 17307906 - 17307952
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||| | ||||||||||||||| |||||||| |||||||    
T  17307906 atttgagaaaataacataattcagtgtaattatatgtgttggtgtcg 17307952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 452 - 506
Target Start/End: Original strand, 17851434 - 17851488
Alignment:
Q  452 accgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    |||||| || |||| ||||||||| ||||||||||||||| ||||||||| ||||    
T  17851434 accgctaataattttagaaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 19992014 - 19992060
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||||| ||| ||||||||||| ||| ||||||||||||    
T  19992014 atttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcg 19992060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 439 - 517
Target Start/End: Original strand, 25481892 - 25481970
Alignment:
Q  439 atgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgata 517  Q
    |||||| ||| |||| ||| || |||||| ||||||| ||||||||||||||| | | |||| ||||||||| ||||||    
T  25481892 atgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacgata 25481970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 504
Target Start/End: Complemental strand, 38134452 - 38134410
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggt 504  Q
    |||||||||||| | |||||||| |||||||||||||||||||    
T  38134452 atttgagaaaatgacataattcaatgtaatcatatgtgtcggt 38134410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 440 - 505
Target Start/End: Original strand, 2948674 - 2948739
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtg 505  Q
    ||||| ||| |||||||| || |||| |||||||||  ||||| |||||||| |||||||||||||    
T  2948674 tgacacgccgacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtgtcggtg 2948739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 431 - 531
Target Start/End: Complemental strand, 7197375 - 7197274
Alignment:
Q  431 acacagacat-gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    |||||||||| |||| ||| |||| ||| || |||| | |||||||| ||||||| |||||| | | |||||||||||||| || | ||||||| |||||    
T  7197375 acacagacattgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcggacacaacacatgtccgacac 7197276  T
Q  530 cg 531  Q
    ||    
T  7197275 cg 7197274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 440 - 501
Target Start/End: Original strand, 22868033 - 22868094
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtc 501  Q
    ||||| ||| ||||| || || || ||||||||||| ||||||||||||||| |||||||||    
T  22868033 tgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 450 - 491
Target Start/End: Complemental strand, 29787427 - 29787386
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaat 491  Q
    |||||||| || |||||||||||||| |||||||||||||||    
T  29787427 acaccgctaataatttgagaaaatcacataattcagtgtaat 29787386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 12797377 - 12797315
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    ||||||| ||||||||||||||| | | |||||||||||||| ||||||||||||||||||||    
T  12797377 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacaccg 12797315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 425 - 531
Target Start/End: Original strand, 21945478 - 21945585
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtc 523  Q
    |||| |||||||||| ||||||||| |||| ||| || |||||| ||||| | ||||||||||||||| | | |||||||||||||| | || |||||||    
T  21945478 gacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtc 21945577  T
Q  524 tgacaccg 531  Q
     |||||||    
T  21945578 cgacaccg 21945585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 437 - 503
Target Start/End: Original strand, 40613438 - 40613504
Alignment:
Q  437 acatgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcgg 503  Q
    |||||||| ||| |||||||| ||  ||||||||||||| ||||||||||||||| |||||||||||    
T  40613438 acatgacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 450 - 515
Target Start/End: Complemental strand, 8423776 - 8423711
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||||||| || |||||||||||||| ||||||||||||||| |||  ||||||||||||| ||||    
T  8423776 acaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacacga 8423711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 451 - 508
Target Start/End: Complemental strand, 30982935 - 30982878
Alignment:
Q  451 caccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||| ||||||||||||||||| ||| ||||||||||| ||| ||||||||||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcg 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 446 - 510
Target Start/End: Original strand, 16189706 - 16189770
Alignment:
Q  446 gccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||||||| |  |||||||||||||| ||||||||||||||| || |||||||||| ||||    
T  16189706 gccaacaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtgacgga 16189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 29205442 - 29205526
Alignment:
Q  447 ccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    ||||||| ||| || |||||| ||||||| ||||||||||||||| | | |||||||||| ||| |||| ||||||| |||||||    
T  29205442 ccaacacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtccgacaccg 29205526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 440 - 500
Target Start/End: Original strand, 36635315 - 36635375
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgt 500  Q
    ||||| ||||||||| || || |||||||||||||| ||||||||||||||| ||||||||    
T  36635315 tgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 425 - 531
Target Start/End: Complemental strand, 23293070 - 23292963
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtc 523  Q
    |||||||||| |||| ||||| ||| |||| ||| || |||||| ||||||| |||||||||| |||| | | |||||||||||||| |||| || ||||    
T  23293070 gacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtc 23292971  T
Q  524 tgacaccg 531  Q
     |||||||    
T  23292970 cgacaccg 23292963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 507
Target Start/End: Original strand, 33950135 - 33950194
Alignment:
Q  448 caacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||| ||||| || |||||||||||||| |||||| | ||||||||||||||||||||||    
T  33950135 caacgccgctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtc 33950194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 463 - 522
Target Start/End: Complemental strand, 40179681 - 40179622
Alignment:
Q  463 tttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgt 522  Q
    ||||| ||||||| ||||||||||||||| ||||| |||||||||||| |||| ||||||    
T  40179681 tttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcggacacgacacatgt 40179622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 462 - 501
Target Start/End: Complemental strand, 56488556 - 56488517
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtc 501  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  56488556 atttgagaaaatcatataattcagggtaatcatatgtgtc 56488517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 463 - 529
Target Start/End: Complemental strand, 8402787 - 8402721
Alignment:
Q  463 tttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||||||||||||||||||||||||||| |||||| || ||||| || |||| || |||| |||||    
T  8402787 tttgagaaaatcatataattcagtgtaattatatgtctcagtgtcagacacgacacttgtccgacac 8402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 462 - 528
Target Start/End: Complemental strand, 30103402 - 30103337
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgaca 528  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||  | |||| | ||||||||||    
T  30103402 atttgagaaaatcacataatt-agtgtaatcatatgtgtcggtgtcaaacacgacatatgtctgaca 30103337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 5775404 - 5775359
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||    
T  5775404 atttgagaaaatcacataattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 54580069 - 54580016
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||||| ||||||| ||||||||||||||| ||| |||||||||||||| ||||    
T  54580069 atttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacga 54580016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 477 - 529
Target Start/End: Original strand, 16073422 - 16073474
Alignment:
Q  477 ataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||||||||||||| | | |||||||||||||| |||||||||||| |||||    
T  16073422 ataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacac 16073474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 462 - 530
Target Start/End: Complemental strand, 38847058 - 38846990
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacacc 530  Q
    |||||| |||||||||| |||||||||||| | | ||||| ||||||||||||| || |||| ||||||    
T  38847058 atttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtcggatacgacacgtgtccgacacc 38846990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 450 - 501
Target Start/End: Complemental strand, 3712567 - 3712516
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtc 501  Q
    |||||||| || ||||||||||||||| ||||||| |||||| |||||||||    
T  3712567 acaccgctaataatttgagaaaatcatgtaattcaatgtaattatatgtgtc 3712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 465 - 508
Target Start/End: Original strand, 7970535 - 7970578
Alignment:
Q  465 tgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||||||||||||||||||||| |||||| | |||||||    
T  7970535 tgagaaaatcatataattcagtgtaattatatgttttggtgtcg 7970578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 479 - 522
Target Start/End: Complemental strand, 20950456 - 20950413
Alignment:
Q  479 aattcagtgtaatcatatgtgtcggtgtcggatacgatacatgt 522  Q
    ||||||||||||| ||||||||||||||| || |||||||||||    
T  20950456 aattcagtgtaattatatgtgtcggtgtcagacacgatacatgt 20950413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 56257946 - 56257990
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||||    
T  56257946 atttgagaaaatcatataattcagtgtaat--tatgtgtctgtgtcg 56257990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 464 - 510
Target Start/End: Complemental strand, 10499314 - 10499268
Alignment:
Q  464 ttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||||||||| |||||| |||||||| ||||||||| ||||||||    
T  10499314 ttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcgga 10499268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 450 - 508
Target Start/End: Original strand, 13783282 - 13783340
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||| || ||||||||| |||| | ||||||||||||| ||||||| ||||||||    
T  13783282 acaccgctaattatttgagaagatcacaaaattcagtgtaattatatgtgccggtgtcg 13783340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 40742604 - 40742650
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||||||||||||||  |||||||| |||||||||| |||||    
T  40742604 atttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcg 40742650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 500
Target Start/End: Complemental strand, 46180982 - 46180944
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgt 500  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  46180982 atttgagaaaataacataattcagtgtaatcatatgtgt 46180944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 9996853 - 9996898
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||||| |||||||||| |||| |||||| ||||||||    
T  9996853 atttgagaaaatcacataattcagtataattatatgtctcggtgtc 9996898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 508
Target Start/End: Complemental strand, 15659821 - 15659760
Alignment:
Q  447 ccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||| ||| || |||||||||||||  ||||||| ||||||| |||||||| |||||||    
T  15659821 ccaacactgctaataatttgagaaaatctcataattcggtgtaattatatgtgttggtgtcg 15659760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 18576083 - 18576038
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||||| ||||||| ||||||| |||||||| ||||||    
T  18576083 atttgagaaaatcacataattcggtgtaattatatgtgttggtgtc 18576038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 499
Target Start/End: Complemental strand, 22440646 - 22440609
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtg 499  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  22440646 atttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 440 - 508
Target Start/End: Complemental strand, 35723453 - 35723384
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaat-catataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||| ||| |||||||| || |||||||||||| || |||||||| |||||| ||||||||| ||||||    
T  35723453 tgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtgtcg 35723384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 510
Target Start/End: Complemental strand, 34691861 - 34691803
Alignment:
Q  452 accgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||| || |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  34691861 accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcgga 34691803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 510
Target Start/End: Complemental strand, 34714273 - 34714215
Alignment:
Q  452 accgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    |||||| || |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  34714273 accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcgga 34714215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 18276496 - 18276585
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatac 513  Q
    ||||||| ||||||| ||| ||||| |||||||| || ||||||||||||||  |||||||||||||| || |||||||||||| |||||    
T  18276496 gacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgtcagatac 18276585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 440 - 508
Target Start/End: Complemental strand, 37411312 - 37411244
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||| |||||||| || |||||||||||||| |||||||||||| || |||||||||| |||||    
T  37411312 tgacatgccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcg 37411244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 464 - 507
Target Start/End: Complemental strand, 18889635 - 18889592
Alignment:
Q  464 ttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  18889635 ttgagaaaatcacataattcagtgtaatcatatgtgtcggtgtc 18889592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 462 - 520
Target Start/End: Original strand, 5367205 - 5367263
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacat 520  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||||||| |||| ||||    
T  5367205 atttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacat 5367263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 448 - 530
Target Start/End: Original strand, 18570971 - 18571053
Alignment:
Q  448 caacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacacc 530  Q
    |||||||| | || |||||||||||| | |||||||| |||||||||||||||| |||||| | ||||||||| || ||||||    
T  18570971 caacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgaacacgatacatatccgacacc 18571053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 467 - 529
Target Start/End: Complemental strand, 20242768 - 20242706
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| || | || ||||||||||    
T  20242768 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacac 20242706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 400 - 508
Target Start/End: Complemental strand, 21782927 - 21782820
Alignment:
Q  400 ctatgaaacacgtatagggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgt 498  Q
    ||||||| |||| |||  |||||| ||||||||||| ||| ||||| ||| |||| ||| || |||||||||||||| |||||||||||||||  |||||    
T  21782927 ctatgaagcacgaatacagacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaat--tatgt 21782830  T
Q  499 gtcggtgtcg 508  Q
    | ||||||||    
T  21782829 gccggtgtcg 21782820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 440 - 506
Target Start/End: Original strand, 39279666 - 39279732
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    ||||| |||||||||| | || || ||||||||||| ||||||||||||||| ||||||||||||||    
T  39279666 tgacacgccaacaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgt 39279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 450 - 508
Target Start/End: Original strand, 44860321 - 44860379
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||| || |||||||||||||  ||||||||||||||| ||||||||||||||||    
T  44860321 acaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcg 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 508
Target Start/End: Complemental strand, 20539783 - 20539674
Alignment:
Q  400 ctatgaaacacgtatagggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgt 498  Q
    ||||||| |||| ||| ||||||| |||||||||| |||| ||||| | | |||| ||| || |||||| |||||||||||||| |||||||| | | ||    
T  20539783 ctatgaagcacggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagt 20539684  T
Q  499 gtcggtgtcg 508  Q
    ||||||||||    
T  20539683 gtcggtgtcg 20539674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 450 - 511
Target Start/End: Original strand, 23718027 - 23718088
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggat 511  Q
    |||||||| || |||||||||| ||| ||||||||||||||| ||||||||||||| |||||    
T  23718027 acaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtgacggat 23718088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 450 - 511
Target Start/End: Original strand, 24105699 - 24105760
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggat 511  Q
    |||||||| || |||||||||| ||| ||||||||||||||| ||||||||||||| |||||    
T  24105699 acaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtgacggat 24105760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 425 - 500
Target Start/End: Original strand, 21616737 - 21616813
Alignment:
Q  425 gacacgacacagacatg-acatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgt 500  Q
    |||||||||| |||| | ||| ||| |||||||| || |||||||||||||| ||||||||||||||| ||||||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 464 - 508
Target Start/End: Original strand, 35056883 - 35056927
Alignment:
Q  464 ttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||    
T  35056883 ttgagaaaaccatataattcagtgtaattatatgtgtcggtgtcg 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 2438758 - 2438696
Alignment:
Q  469 aaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    ||||||| ||||||||||||||| | | |||||||||||||| |||| ||||||| |||||||    
T  2438758 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccg 2438696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 450 - 508
Target Start/End: Complemental strand, 24975383 - 24975325
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||| || ||||||||||||| |||||||||||||||  ||||| ||||||||||    
T  24975383 acaccgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtcg 24975325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 450 - 508
Target Start/End: Complemental strand, 29970607 - 29970549
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||| || |||||||||||||  ||| |||||||||||||||||||||| |||||    
T  29970607 acaccgctaataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcgatgtcg 29970549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 462 - 504
Target Start/End: Complemental strand, 30527641 - 30527599
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggt 504  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  30527641 atttgagaaaatcatataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 440 - 510
Target Start/End: Original strand, 31018581 - 31018651
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    ||||| |||||||||||| || |||| ||||||||| || ||| |||||||| ||| ||||||||||||||    
T  31018581 tgacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggtgtcgga 31018651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 463 - 529
Target Start/End: Complemental strand, 43586050 - 43585984
Alignment:
Q  463 tttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    ||||||||||| | |||||||| |||||||| | |||||||||||||| ||||||| |||| |||||    
T  43586050 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcagacac 43585984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 425 - 510
Target Start/End: Original strand, 896188 - 896272
Alignment:
Q  425 gacacgacacagacatgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgga 510  Q
    ||||||||||| || ||||| ||| |||| ||| ||  ||||||||||||| ||| |||| |||||||||||||||||| ||||||    
T  896188 gacacgacacacac-tgacacgccgacactgctaatagtttgagaaaatcacatatttcaatgtaatcatatgtgtcggcgtcgga 896272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 38355933 - 38355888
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||||| |||||||||||| || |||||||||||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 38355888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 462 - 502
Target Start/End: Original strand, 25544494 - 25544534
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcg 502  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  25544494 atttgagaaaatgatataattcagtgtaatcataggtgtcg 25544534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 462 - 530
Target Start/End: Complemental strand, 30404896 - 30404828
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacacc 530  Q
    |||||| ||||||| ||||||||||||||| | | ||||||| |||||| |||| ||||||| ||||||    
T  30404896 atttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcggacacgacacatgtccgacacc 30404828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 426 - 501
Target Start/End: Original strand, 35449489 - 35449565
Alignment:
Q  426 acacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtc 501  Q
    |||||||||| ||| ||||| |||||||| | | || |||||||||||||| | ||||||||||||| |||||||||    
T  35449489 acacgacacaaacactgacaagccaacactgttaataatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 442 - 498
Target Start/End: Original strand, 36281678 - 36281734
Alignment:
Q  442 acatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgt 498  Q
    ||||||||| |||| | || |||||||||||||| |||||| |||||||||||||||    
T  36281678 acatgccaataccgttaataatttgagaaaatcacataatttagtgtaatcatatgt 36281734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 491
Target Start/End: Complemental strand, 22084892 - 22084849
Alignment:
Q  448 caacaccgcttatgatttgagaaaatcatataattcagtgtaat 491  Q
    |||||||| | || ||||||||||||||||||||||||||||||    
T  22084892 caacaccgttaataatttgagaaaatcatataattcagtgtaat 22084849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 450 - 509
Target Start/End: Original strand, 28677910 - 28677968
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcgg 509  Q
    |||||||| || |||||| ||||||| ||||||||||||||| |||||| ||||||||||    
T  28677910 acaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt-tcggtgtcgg 28677968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 1327979 - 1328034
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||| || |||||||||||||||| |||||||| ||||  ||||||||||||||    
T  1327979 acaccgctaataatttgagaaaatcataaaattcagtataat--tatgtgtcggtgtc 1328034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 440 - 506
Target Start/End: Complemental strand, 18420502 - 18420436
Alignment:
Q  440 tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 506  Q
    ||||| |||||||| ||| || |||||||||||||| |||||||| || ||| ||| ||||||||||    
T  18420502 tgacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgt 18420436  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 653 - 722
Target Start/End: Complemental strand, 20124316 - 20124246
Alignment:
Q  653 tgactaatttgtccttcatatcaaaatgtaagagactaatatgggttaattttttg-tcggaactaaattg 722  Q
    ||||||||||||||||||||| ||||||| |   |||||| || ||| |||||||| ||||||||||||||    
T  20124316 tgactaatttgtccttcatataaaaatgttatgaactaatgtgagtttattttttgttcggaactaaattg 20124246  T

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Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 417 - 505
Target Start/End: Original strand, 28412317 - 28412404
Alignment:
Q  417 ggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtg 505  Q
    |||||| ||||||||||| |||| | ||| | |||||||| | || |||||| ||||||| |||||||||||||||  ||||||||||||    
T  28412317 ggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaat--tatgtgtcggtg 28412404  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 45000892 - 45000846
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||| | | |||||| |||||||||||||||||||||||    
T  45000892 atttgagaaaatgacacaattcaatgtaatcatatgtgtcggtgtcg 45000846  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 5473341 - 5473394
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacga 515  Q
    |||||| ||||||| ||||||| |||||||  ||||||||||||||||| ||||    
T  5473341 atttgaaaaaatcacataattcggtgtaatattatgtgtcggtgtcggacacga 5473394  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 467 - 508
Target Start/End: Complemental strand, 34785023 - 34784982
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||| |||||| |||||||| ||||||||||||||||    
T  34785023 agaaaatcacataatttagtgtaattatatgtgtcggtgtcg 34784982  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 42832334 - 42832277
Alignment:
Q  450 acaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||| || |||||||||||| | ||| ||||||||||| ||| |||||||||||    
T  42832334 acaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

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Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 425 - 507
Target Start/End: Original strand, 90818 - 90901
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    ||||||||||||||| |||||  ||||||||  | || |||||||||||||||||||||||||||||| |||| ||||| ||||    
T  90818 gacacgacacagacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattatatatgtcgatgtc 90901  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 240067 - 240022
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtc 507  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||    
T  240067 atttgagaaaataatataattcaatgtaatcatatgtgtcggtgtc 240022  T

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Target: scaffold0697 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 441 - 529
Target Start/End: Original strand, 1636 - 1724
Alignment:
Q  441 gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacac 529  Q
    |||| ||| |||||| | || |||||||||||||||||||||  || |||| ||| |||||||||||||| |||| ||||||| |||||    
T  1636 gacacgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacgacacatgtccgacac 1724  T

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Target: scaffold0053 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 425 - 532
Target Start/End: Original strand, 8773 - 8881
Alignment:
Q  425 gacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtc 523  Q
    |||||||||| |||| ||||| ||| |||| ||| || |||||| |||||||||| ||| |||||||| | | |||||||||||||| |||| || ||||    
T  8773 gacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtc 8872  T
Q  524 tgacaccga 532  Q
     ||||||||    
T  8873 cgacaccga 8881  T

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Target: scaffold0008 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 263464 - 263372
Alignment:
Q  417 ggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||| || ||||||| |||| ||||||| |||||| ||| || ||||||||||| || ||||||||||||||| ||| ||||| ||||||    
T  263464 ggacactggatacgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcg 263372  T

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Target: scaffold0049 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 457 - 508
Target Start/End: Original strand, 56930 - 56981
Alignment:
Q  457 ttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  56930 ttataatttgagaaaatgatataattcagtgtaatcataagtgtcagtgtcg 56981  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 441 - 508
Target Start/End: Complemental strand, 9814 - 9747
Alignment:
Q  441 gacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||| || || || || ||||||||||||||  |||||||||||||| ||||||||||||||||    
T  9814 gacatgccgacgccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 9747  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 462 - 504
Target Start/End: Complemental strand, 44571 - 44529
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggt 504  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  44571 atttgagaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 135358 - 135312
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  135358 atttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcg 135312  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 462 - 530
Target Start/End: Original strand, 70291 - 70359
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacacc 530  Q
    |||||| ||||| | ||||||||||||||| ||| |||||||||||||| |||| || |||| ||||||    
T  70291 atttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacacc 70359  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 462 - 505
Target Start/End: Original strand, 53193 - 53236
Alignment:
Q  462 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtg 505  Q
    |||||||||||||| ||||||||||||||| ||| |||||||||    
T  53193 atttgagaaaatcacataattcagtgtaattataagtgtcggtg 53236  T

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Target: scaffold0083 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 477 - 531
Target Start/End: Complemental strand, 45561 - 45507
Alignment:
Q  477 ataattcagtgtaatcatatgtgtcggtgtcggatacgatacatgtctgacaccg 531  Q
    ||||||||||||||| | | |||||||||||||| |||| || ||||||||||||    
T  45561 ataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccg 45507  T

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Target: scaffold0223 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 508
Target Start/End: Original strand, 20122 - 20231
Alignment:
Q  400 ctatgaaacacgtatagggacactagacacgacacagaca-tgacatgccaacaccgcttatgatttgagaaaatcatataattcagtgtaatcatatgt 498  Q
    ||||||| |||  ||| ||||||  |||||||||| |||| ||||| ||| |||| ||| || |||||| ||||||| ||||||||||||||| | | ||    
T  20122 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagt 20221  T
Q  499 gtcggtgtcg 508  Q
    ||| ||||||    
T  20222 gtcagtgtcg 20231  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 467 - 508
Target Start/End: Original strand, 9916 - 9957
Alignment:
Q  467 agaaaatcatataattcagtgtaatcatatgtgtcggtgtcg 508  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||    
T  9916 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 9957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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