View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1341_high_16 (Length: 251)
Name: NF1341_high_16
Description: NF1341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1341_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 35235398 - 35235586
Alignment:
| Q |
1 |
aaacaaatgaggtttagggctattgttgttgttggtgataagcaaggacgagttggtgttggtgttgggaaagctaaggaagttgtttctgctgttcaga |
100 |
Q |
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| T |
35235398 |
aaacaaatgaggtttagggctattgttgttgttggtgataagcaaggaagagttggtgttggtgttgggaaagctaaggaagttgtttctgctgttcaga |
35235497 |
T |
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| Q |
101 |
aatctgctattaatgctaggaggaatcttattagagttcctatgactaagtacttgacttttcctcataggtaactttctctaactttc |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35235498 |
aatctgctattaatgctaggaggaatcttattagagttcctatgactaagtacttgacttttcctcataggtaactttctctaactttc |
35235586 |
T |
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