View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13422_high_1 (Length: 507)

Name: NF13422_high_1
Description: NF13422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13422_high_1
NF13422_high_1
[»] chr5 (16 HSPs)
chr5 (21-498)||(39472176-39472653)
chr5 (21-349)||(39464107-39464435)
chr5 (250-497)||(39454780-39455027)
chr5 (207-498)||(39475646-39475943)
chr5 (29-433)||(39457853-39458258)
chr5 (24-498)||(39451140-39451620)
chr5 (255-499)||(39460389-39460636)
chr5 (197-495)||(39486608-39486912)
chr5 (215-493)||(39483405-39483686)
chr5 (250-495)||(39470538-39470783)
chr5 (250-349)||(43312315-43312414)
chr5 (21-82)||(39460809-39460870)
chr5 (386-495)||(39464451-39464560)
chr5 (29-85)||(39470317-39470373)
chr5 (24-83)||(39483818-39483877)
chr5 (30-83)||(39476067-39476120)


Alignment Details
Target: chr5 (Bit Score: 454; Significance: 0; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 21 - 498
Target Start/End: Complemental strand, 39472653 - 39472176
Alignment:
Q  21 actgcgtgggattctagctcttcaaatgaatttactataaagccatcagcgttcttgaggcctttccaatagcccatcataaacgactcccattctttgc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39472653 actgcgtgggattctagctcttcaaatgaatttactataaagccatcagcgttcttgaggcctttccaatagcccatcataaacgactcccattctttgc 39472554  T
Q  121 ttagcaccgcactgggcaacgctgttgttggaaccaagttagtgaaactcgggacagccaagtcagtgagttgtaacaacttagttgaatagacattgtc 220  Q
    ||||||| ||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39472553 ttagcacagcactgggcaatgcttttgttggaaccaagttagcgaaactcgggacagccaagtcagtgagttgtaacaacttagttgaatagacattgtc 39472454  T
Q  221 tcgttgacgaagagtgtaaagatgaaaactcaatccaaggaacgcaacaccggaagtgaagaagacaagcgtagggacagagaactctttggcaacatca 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39472453 tcgttgacgaagagtgtaaagatgaaaactcaatccaaggaacgcaacaccggaagtgaagaagacaagcgtagggacagagaactctttggcaacatca 39472354  T
Q  321 atcatgtttgtgcagaacatgtcaacaacaaaagcggcaaggactccattttctgatctggtaatgaggttagatacaacttgtttgacgtttggtttct 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39472353 atcatgtttgtgcagaacatgtcaacaacaaaagcggcaaggactccattttctgatctggtaatgaggttagatactacttgtttgacgtttggtttct 39472254  T
Q  421 gagcttcgaggagcgcagtcatagaggaaccttgatctgtgtttggggcaagagaacattctggaaggttgatgatgt 498  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39472253 gagcttcgaggagcgcagtcatagagggaccttgatctgtgtttggggcaagagaacattctggaaggttgatgatgt 39472176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 21 - 349
Target Start/End: Original strand, 39464107 - 39464435
Alignment:
Q  21 actgcgtgggattctagctcttcaaatgaatttactataaagccatcagcgttcttgaggcctttccaatagcccatcataaacgactcccattctttgc 120  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||   ||||| ||| | |||||||||  |||| ||||    
T  39464107 actgcatgggattctagctcttcaaatgaatttactataaaaccatcagccttcttgaggccttttgcatagctcatgaaaaacgactcggattccttgc 39464206  T
Q  121 ttagcaccgcactgggcaacgctgttgttggaaccaagttagtgaaactcgggacagccaagtcagtgagttgtaacaacttagttgaatagacattgtc 220  Q
     ||  || ||||||||||||| | |||| |||||  |||||| |||||||||||  | ||| ||||| |||||   || || |||||||| ||| |||||    
T  39464207 gtattactgcactgggcaacgattttgtaggaacggagttagcgaaactcgggagggacaattcagtcagttgctccagctgagttgaatcgacgttgtc 39464306  T
Q  221 tcgttgacgaagagtgtaaagatgaaaactcaatccaaggaacgcaacaccggaagtgaagaagacaagcgtagggacagagaactctttggcaacatca 320  Q
    ||||| |   | ||||| || ||||| | |||| |||||||| |||||||  ||||||||||| |||| || |||||| || || || ||||||||||||    
T  39464307 tcgttcaaacaaagtgtgaatatgaagattcaaaccaaggaaagcaacactcgaagtgaagaacacaaacgcagggacggaaaattccttggcaacatca 39464406  T
Q  321 atcatgtttgtgcagaacatgtcaacaac 349  Q
    |||||||| ||||||||||||||||||||    
T  39464407 atcatgttggtgcagaacatgtcaacaac 39464435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 250 - 497
Target Start/End: Complemental strand, 39455027 - 39454780
Alignment:
Q  250 tcaatccaaggaacgcaacaccggaagtgaagaagacaagcgtagggacagagaactctttggcaacatcaatcatgtttgtgcagaacatgtcaacaac 349  Q
    |||| |||||||| || |||| ||||||||||||||| || |||||||  |||||||||||||||||||||||||||  ||||||| |||||||||||||    
T  39455027 tcaaaccaaggaaagctacactggaagtgaagaagacgagtgtagggatggagaactctttggcaacatcaatcatggctgtgcaggacatgtcaacaac 39454928  T
Q  350 aaaagcggcaaggactccattttctgatctggtaatgaggttagatacaacttgtttgacgtttggtttctgagcttcgaggagcgcagtcatagaggaa 449  Q
     ||||| || ||||||||| || ||   |  |||||||||||||||||  |||||||||||||||||||||||||||| ||| | || | ||| ||||||    
T  39454927 gaaagctgcgaggactccacttgcttcaccagtaatgaggttagatacggcttgtttgacgtttggtttctgagcttcaaggtgagcggacatggaggaa 39454828  T
Q  450 ccttgatctgtgtttggggcaagagaacattctggaaggttgatgatg 497  Q
     || |||  |||||||||| |||||| |||||||||||||||||||||    
T  39454827 actggattagtgtttgggggaagagagcattctggaaggttgatgatg 39454780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 207 - 498
Target Start/End: Complemental strand, 39475943 - 39475646
Alignment:
Q  207 gaatagacattgtctcgttgacgaagagtgtaaagatgaaaactcaatccaaggaacgcaacaccggaagtgaagaagacaagcgtagggacagagaact 306  Q
    |||| |||||||||||||| ||||||||||||||| | || | |||| |||||| | |||||||| ||||||||||| || ||||||||||||  |||||    
T  39475943 gaatcgacattgtctcgttcacgaagagtgtaaaggtaaagattcaaaccaagggaagcaacaccagaagtgaagaaaacgagcgtagggacattgaact 39475844  T
Q  307 ctttggcaacatcaatcatgtttgtgcagaacatgtcaacaacaaaagcggcaaggactccatttt---ctgatctggtaatgaggttagatacaacttg 403  Q
    | ||||||||||  |||||| | |||||||||||||||||||| || ||||| |||  ||||| ||   ||  ||| ||| ||||||| || ||| ||||    
T  39475843 cattggcaacattgatcatggtggtgcagaacatgtcaacaacgaaggcggcgaggtgtccatgttgtccttctctagtagtgaggttggagacagcttg 39475744  T
Q  404 tttgacgtttggtttctgagcttcgaggagcgcagtcat---agaggaaccttgatctgtgtttggggcaagagaacattctggaaggttgatgatgt 498  Q
    ||| |||||||||||||||||||||||||| || |||||   |||| ||||| |||| |||||||||| |||||||  ||||||||||||||||||||    
T  39475743 ttttacgtttggtttctgagcttcgaggagagctgtcatggaagagaaacctggatcggtgtttgggggaagagaaacttctggaaggttgatgatgt 39475646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 29 - 433
Target Start/End: Original strand, 39457853 - 39458258
Alignment:
Q  29 ggattctagctcttcaaatgaatttactataaagccatcagcgttcttgaggcctttccaatagcccatcataaacgactcccattctttgcttagcacc 128  Q
    ||||||||||||||||||||||||||| |||| | ||||||| |||||||| ||||||  ||||| ||| |  || ||||||||||| |||| ||||||     
T  39457853 ggattctagctcttcaaatgaatttacaataatggcatcagcattcttgagacctttcgcatagctcatgaagaaggactcccattccttgcgtagcact 39457952  T
Q  129 gcactgggcaacgctgttgttggaaccaagttagtgaaactcgggacagccaagtcagtgagttgtaacaacttagttgaatagacattgtctcgttgac 228  Q
    | ||||||||| |   |||  |||||  |||||| |||||   |||  ||||| |||||  | || | ||||| ||| ||||  || |||||||||| |     
T  39457953 gaactgggcaaagtgtttgaaggaactgagttagcgaaacctcggatggccaactcagtctgctgcagcaactgagtggaatcaacgttgtctcgttcaa 39458052  T
Q  229 gaagagtgtaaagatgaaaact-caatccaaggaacgcaacaccggaagtgaagaagacaagcgtagggacagagaactctttggcaacatcaatcatgt 327  Q
      | | | | || ||||| | | ||| |||||||| ||||||||||||||||||||||| |||||||||||||| || |||||  ||||||||||||||     
T  39458053 acatattatgaatatgaagatttcaaaccaaggaaagcaacaccggaagtgaagaagacgagcgtagggacagaaaattcttttacaacatcaatcatgg 39458152  T
Q  328 ttgtgcagaacatgtcaacaacaaaagcggcaaggactccattttctgatctggtaatgaggttagatacaacttgtttgacgtttggtttctgagcttc 427  Q
    | |||||||||||||||||||  || || || |||||||||||||||| |    || ||||||| || ||  ||| |||||||||||||||||||||||     
T  39458153 tggtgcagaacatgtcaacaatgaatgcagctaggactccattttctggtgctttagtgaggttggagacggcttttttgacgtttggtttctgagcttt 39458252  T
Q  428 gaggag 433  Q
    ||||||    
T  39458253 gaggag 39458258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 498
Target Start/End: Complemental strand, 39451620 - 39451140
Alignment:
Q  24 gcgtgggattctagctcttcaaatgaatttactataaagccatcagcgttcttgaggcctttccaatagcccatcataaacgactcccattctttgctta 123  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| || |||||||||||||      ||| ||| | |||||  |||||||| |||||||    
T  39451620 gcgtgtgattctagctcttcaaatgaatttactataatgccatcggcattcttgaggccttctatgaagctcatgaaaaacggttcccattccttgctta 39451521  T
Q  124 gcaccgcactgggcaacgctgttgttggaaccaagttagtgaaactcgggacagccaagtcagtgagttgtaacaacttagttgaatagacattgtctcg 223  Q
    | || | ||  ||||| |   |||  |||| ||||| || |||| ||||||  || || ||  |  | ||   ||||| ||||||||  || ||||||||    
T  39451520 ggacggaaccaggcaatgagcttgaaggaaacaagtgagcgaaagtcgggatggctaactctttctgctgctgcaactgagttgaatcaacgttgtctcg 39451421  T
Q  224 ttgacgaagagtgtaaagatgaaaactcaatccaaggaacgcaacaccggaagtgaagaagacaagcgtagggacagagaactctttggcaacatcaatc 323  Q
    || ||| || || | || ||||| | |||| |||||| | ||||| || |||||||||||||| ||| |||| || || || |||||||||| |||||||    
T  39451420 ttcacggagggtatgaatatgaagattcaaaccaagggaagcaacgccagaagtgaagaagacgagcataggaactgaaaattctttggcaatatcaatc 39451321  T
Q  324 atgtttgtgcagaacatgtcaacaacaaaagcggcaaggactccatttt---ctgatctggtaatgaggttagatacaacttgtttgacgtttggtttct 420  Q
    ||| | |||||||||||||||||||| |  | ||| |||||||||||||   ||  ||  ||| |||||||||| ||  |||||||||| ||||||||||    
T  39451320 atggtggtgcagaacatgtcaacaacgatggtggcgaggactccattttctcctcctccagtagtgaggttagaaacggcttgtttgacatttggtttct 39451221  T
Q  421 gagcttcgaggagcgcagtcat---agaggaaccttgatctgtgtttggggcaagagaacattctggaaggttgatgatgt 498  Q
    ||||||||||||| |||| |||   || | ||||| |||  |||||||| | |||||||  ||||||||||||||||||||    
T  39451220 gagcttcgaggagagcaggcatggaagcgaaacctggattggtgtttggaggaagagaaacttctggaaggttgatgatgt 39451140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 255 - 499
Target Start/End: Complemental strand, 39460636 - 39460389
Alignment:
Q  255 ccaaggaacgcaacaccggaagtgaagaagacaagcgtagggacagagaactctttggcaacatcaatcatgtttgtgcagaacatgtcaacaacaaaag 354  Q
    |||||| | ||||||||||||||||||||||||||||||||||| || || |||||||||| ||||||||| || ||||||||||||||||||||||| |    
T  39460636 ccaagggaagcaacaccggaagtgaagaagacaagcgtagggactgaaaattctttggcaatatcaatcattttagtgcagaacatgtcaacaacaaagg 39460537  T
Q  355 cggcaaggactcca---ttttctgatctggtaatgaggttagatacaacttgtttgacgtttggtttctgagcttcgaggagcgcagtcatagaggaacc 451  Q
    | |  |||  ||||   ||||||    | ||| |||| ||||||||  ||||||||||||||| |||||||||||||||||  ||  ||||   ||||      
T  39460536 ctgtgagggttccatgtttttctctagtagtagtgagattagatacggcttgtttgacgtttgatttctgagcttcgaggaaagccatcattctggaagt 39460437  T
Q  452 ttgatctgtgtttggggcaagagaacattctggaaggttgatgatgtc 499  Q
    | | ||  ||||||||| |||||||  |||||||||||||||||||||    
T  39460436 tggttcgatgtttgggggaagagaaacttctggaaggttgatgatgtc 39460389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 197 - 495
Target Start/End: Complemental strand, 39486912 - 39486608
Alignment:
Q  197 caacttagttgaatagacattgtctcgttgacgaagagtgtaaagatgaaaactcaatccaaggaacgcaacaccggaagtgaagaagacaagcgtaggg 296  Q
    ||||| |||||||| ||  |||||||||| |   ||||||| |||||| |   |||| ||||| || ||||||||||||||||||||||  |||| ||||    
T  39486912 caactgagttgaatcgatgttgtctcgttcaaacagagtgtgaagatggagcatcaaaccaagaaaagcaacaccggaagtgaagaagatgagcgcaggg 39486813  T
Q  297 acagagaactctttggcaacatcaatcatgtttgtgcagaacatgtcaacaacaaaagcggcaaggactcca------ttttctgatctggtaatgaggt 390  Q
    |  || || |||||||||| |||||||||| | |||||||||||||||||||| || |||||||||  ||||      | | ||  ||| ||| ||||||    
T  39486812 atggaaaattctttggcaatatcaatcatggtggtgcagaacatgtcaacaacgaaggcggcaaggtgtccaggtggttgtccttctctagtagtgaggt 39486713  T
Q  391 tagatacaacttgtttgacgtttggtttctgagcttcgaggagcgcagtcatagaggaaccttgatctgtgtttggggcaagagaacattctggaaggtt 490  Q
    | |||||| |||||||||||||||||||||||||||| ||||| ||  ||||     ||| | | || |||||||||| |||||||||||||||||||||    
T  39486712 tggatacagcttgtttgacgtttggtttctgagcttcaaggagagcgttcatgacaaaacgtggttcggtgtttgggggaagagaacattctggaaggtt 39486613  T
Q  491 gatga 495  Q
    |||||    
T  39486612 gatga 39486608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 215 - 493
Target Start/End: Complemental strand, 39483686 - 39483405
Alignment:
Q  215 attgtctcgttgacgaagagtgtaaagatgaaaactcaatccaaggaacgcaacaccggaagtgaagaagacaagcgtagggacagagaactctttggca 314  Q
    ||||||||||| ||||||||||| ||||| || | |||| |||||| | ||||||| | ||||| |||| || ||||||||||||  |||||| ||||||    
T  39483686 attgtctcgttcacgaagagtgtgaagataaagattcaaaccaagggaagcaacactgaaagtgtagaaaacgagcgtagggacattgaactcattggca 39483587  T
Q  315 acatcaatcatgtttgtgcagaacatgtcaacaacaaaagcggcaaggactccatttt---ctgatctggtaatgaggttagatacaacttgtttgacgt 411  Q
    |||||||||||| | |||||||||||||||||||| || ||||  |||  ||||| ||   ||  ||| ||| ||||||| || ||| ||||| | | ||    
T  39483586 acatcaatcatggtggtgcagaacatgtcaacaacgaaggcggagaggtgtccatgttgtccttctctagtagtgaggttggagacagcttgtattatgt 39483487  T
Q  412 ttggtttctgagcttcgaggagcgcagtcatagaggaaccttgatctgtgtttggggcaagagaacattctggaaggttgat 493  Q
    |||||||||||||||| ||||| ||  | || |  ||| || ||||   |||||||| |||| |||||||||||||||||||    
T  39483486 ttggtttctgagcttcaaggagagcgttgatggcagaaactagatcgaagtttgggggaagataacattctggaaggttgat 39483405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 250 - 495
Target Start/End: Original strand, 39470538 - 39470783
Alignment:
Q  250 tcaatccaaggaacgcaacaccggaagtgaagaagacaagcgtagggacagagaactctttggcaacatcaatcatgtttgtgcagaacatgtcaacaac 349  Q
    |||| |||||||| ||||  ||||||||||| || |||| || |||||  || || |||||||||||||||||||||||||||||||||||||||||||     
T  39470538 tcaaaccaaggaaagcaatgccggaagtgaacaacacaaacgcagggagggaaaattctttggcaacatcaatcatgtttgtgcagaacatgtcaacaat 39470637  T
Q  350 aaaagcggcaaggactccattttctgatctggtaatgaggttagatacaacttgtttgacgtttggtttctgagcttcgaggagcgcagtcatagaggaa 449  Q
     | |||||| |||  ||||| || |  ||  ||| ||||||| || | | ||||||||||||||| ||| |||||||||||||| ||  |||||   |||    
T  39470638 gacagcggcgaggggtccatgttgttctccagtagtgaggttggagatagcttgtttgacgtttgctttatgagcttcgaggagagcgttcatatccgaa 39470737  T
Q  450 ccttgatctgtgtttggggcaagagaacattctggaaggttgatga 495  Q
    ||| |||| | | |||||  || ||||  |||||||||||||||||    
T  39470738 cctggatcagaggttgggagaacagaaacttctggaaggttgatga 39470783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 349
Target Start/End: Original strand, 43312315 - 43312414
Alignment:
Q  250 tcaatccaaggaacgcaacaccggaagtgaagaagacaagcgtagggacagagaactctttggcaacatcaatcatgtttgtgcagaacatgtcaacaac 349  Q
    |||| |||||||| |||||||||||||||||| |||| || | |||||||   || || || || |||||||||||| | ||||||||||||||||||||    
T  43312315 tcaaaccaaggaaagcaacaccggaagtgaagtagacgagggaagggacaccaaagtcattagctacatcaatcatggtggtgcagaacatgtcaacaac 43312414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 39460870 - 39460809
Alignment:
Q  21 actgcgtgggattctagctcttcaaatgaatttactataaagccatcagcgttcttgaggcc 82  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||  || |||||||||||    
T  39460870 actgcatgggattctagctcttcaaatgaatttactataataccatttgctttcttgaggcc 39460809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 495
Target Start/End: Original strand, 39464451 - 39464560
Alignment:
Q  386 gaggttagatacaacttgtttgacgtttggtttctgagcttcgaggagcgcagtcatagaggaaccttgatctgtgtttggggcaagagaacattctgga 485  Q
    ||||||||| ||  ||||||||||||||||||| ||||| || ||||| ||  |||||| ||||||| |||| | | || ||| |||||||  |||||||    
T  39464451 gaggttagagacggcttgtttgacgtttggtttgtgagcatcaaggagagcgttcatagcggaacctggatcagaggtttggggaagagaaacttctgga 39464550  T
Q  486 aggttgatga 495  Q
    ||||||||||    
T  39464551 aggttgatga 39464560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 39470317 - 39470373
Alignment:
Q  29 ggattctagctcttcaaatgaatttactataaagccatcagcgttcttgaggccttt 85  Q
    |||||||||||||||||||||||| || |||| |||||| || ||||||||||||||    
T  39470317 ggattctagctcttcaaatgaattgacaataatgccatcggcattcttgaggccttt 39470373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 39483877 - 39483818
Alignment:
Q  24 gcgtgggattctagctcttcaaatgaatttactataaagccatcagcgttcttgaggcct 83  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||   | ||||||||||||    
T  39483877 gcgtgagattctagctcttaaaatgaatttactataatgccatttactttcttgaggcct 39483818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 39476120 - 39476067
Alignment:
Q  30 gattctagctcttcaaatgaatttactataaagccatcagcgttcttgaggcct 83  Q
    |||||||||||||||||||| |||||||||| |||||   | ||||||||||||    
T  39476120 gattctagctcttcaaatgagtttactataatgccatttactttcttgaggcct 39476067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University