View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13422_high_2 (Length: 427)

Name: NF13422_high_2
Description: NF13422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13422_high_2
NF13422_high_2
[»] chr1 (37 HSPs)
chr1 (18-306)||(46867868-46868151)
chr1 (314-393)||(47134706-47134785)
chr1 (314-393)||(16300391-16300470)
chr1 (314-393)||(52306071-52306150)
chr1 (314-386)||(1367293-1367365)
chr1 (314-382)||(33075673-33075741)
chr1 (314-382)||(1826795-1826863)
chr1 (314-386)||(4890100-4890172)
chr1 (314-386)||(17364616-17364688)
chr1 (314-382)||(22198924-22198992)
chr1 (314-386)||(29188313-29188385)
chr1 (314-386)||(33359702-33359774)
chr1 (334-382)||(38894777-38894825)
chr1 (318-393)||(5426222-5426297)
chr1 (312-382)||(46626341-46626411)
chr1 (305-382)||(29844898-29844975)
chr1 (334-381)||(19322362-19322409)
chr1 (314-378)||(42678376-42678440)
chr1 (328-395)||(28570741-28570808)
chr1 (308-382)||(43116044-43116118)
chr1 (325-386)||(10698131-10698192)
chr1 (319-382)||(10766193-10766256)
chr1 (24-76)||(1604244-1604295)
chr1 (31-74)||(7191032-7191075)
chr1 (335-382)||(19400754-19400801)
chr1 (31-74)||(52426940-52426983)
chr1 (31-73)||(44732634-44732676)
chr1 (30-72)||(47478874-47478916)
chr1 (343-393)||(50557858-50557907)
chr1 (31-72)||(621579-621620)
chr1 (31-76)||(2277752-2277797)
chr1 (31-72)||(8415731-8415772)
chr1 (31-76)||(11214999-11215044)
chr1 (31-76)||(28867477-28867522)
chr1 (21-73)||(15390221-15390273)
chr1 (25-73)||(42054334-42054382)
chr1 (32-68)||(51942301-51942337)
[»] scaffold0009 (2 HSPs)
scaffold0009 (314-393)||(225437-225516)
scaffold0009 (312-382)||(108547-108617)
[»] chr4 (53 HSPs)
chr4 (314-393)||(3821204-3821283)
chr4 (316-393)||(15704115-15704192)
chr4 (314-386)||(12682768-12682840)
chr4 (314-386)||(39716730-39716802)
chr4 (317-393)||(46104184-46104260)
chr4 (306-393)||(35498538-35498625)
chr4 (333-387)||(5752472-5752526)
chr4 (314-379)||(24948306-24948371)
chr4 (324-392)||(35833420-35833488)
chr4 (308-382)||(13171621-13171695)
chr4 (314-382)||(29712371-29712440)
chr4 (314-386)||(2116091-2116163)
chr4 (334-382)||(3757748-3757796)
chr4 (314-382)||(39406248-39406316)
chr4 (334-382)||(50119974-50120022)
chr4 (334-382)||(51347510-51347558)
chr4 (328-382)||(8956932-8956986)
chr4 (328-382)||(8986904-8986958)
chr4 (328-382)||(37349802-37349856)
chr4 (316-386)||(52799029-52799099)
chr4 (334-382)||(24547353-24547401)
chr4 (342-382)||(30529295-30529335)
chr4 (314-382)||(35716315-35716383)
chr4 (314-366)||(47560251-47560303)
chr4 (314-382)||(53991568-53991636)
chr4 (328-395)||(9888893-9888960)
chr4 (342-393)||(17730463-17730514)
chr4 (334-382)||(20588584-20588632)
chr4 (30-73)||(18424923-18424966)
chr4 (31-74)||(35207178-35207221)
chr4 (31-74)||(53572354-53572397)
chr4 (18-65)||(54103578-54103625)
chr4 (31-72)||(56479253-56479294)
chr4 (346-382)||(578621-578657)
chr4 (31-71)||(12167643-12167683)
chr4 (334-382)||(36743218-36743266)
chr4 (31-74)||(13578492-13578535)
chr4 (25-72)||(19594235-19594282)
chr4 (31-73)||(3036082-3036124)
chr4 (31-73)||(4234312-4234354)
chr4 (31-73)||(5179909-5179951)
chr4 (31-73)||(11375916-11375958)
chr4 (31-73)||(39697889-39697931)
chr4 (328-382)||(50033697-50033750)
chr4 (31-73)||(52798279-52798321)
chr4 (24-73)||(40051623-40051672)
chr4 (24-73)||(42381133-42381182)
chr4 (22-74)||(8282342-8282394)
chr4 (21-73)||(31852630-31852682)
chr4 (21-65)||(37310036-37310080)
chr4 (22-74)||(40123167-40123219)
chr4 (21-73)||(40994120-40994172)
chr4 (33-73)||(42218751-42218791)
[»] chr5 (32 HSPs)
chr5 (314-393)||(3088037-3088116)
chr5 (314-386)||(25698730-25698802)
chr5 (314-393)||(30140504-30140583)
chr5 (314-393)||(33709819-33709898)
chr5 (314-386)||(41689277-41689349)
chr5 (315-382)||(42977849-42977913)
chr5 (317-393)||(12422350-12422426)
chr5 (314-382)||(12592485-12592553)
chr5 (334-382)||(30754431-30754479)
chr5 (334-382)||(36886985-36887033)
chr5 (328-382)||(6305466-6305520)
chr5 (328-382)||(43138563-43138617)
chr5 (328-395)||(754448-754515)
chr5 (314-371)||(26602196-26602253)
chr5 (314-387)||(34727347-34727420)
chr5 (334-382)||(17643402-17643450)
chr5 (348-386)||(34715632-34715670)
chr5 (31-73)||(41930106-41930148)
chr5 (31-76)||(546800-546845)
chr5 (21-74)||(10241725-10241778)
chr5 (21-72)||(2362971-2363022)
chr5 (18-73)||(11146543-11146598)
chr5 (21-71)||(4153550-4153600)
chr5 (31-73)||(5900293-5900335)
chr5 (31-73)||(40091478-40091520)
chr5 (31-73)||(43580879-43580921)
chr5 (31-72)||(6414070-6414111)
chr5 (32-73)||(42158883-42158924)
chr5 (335-392)||(43352943-43353000)
chr5 (25-73)||(12891558-12891606)
chr5 (25-73)||(26912834-26912882)
chr5 (21-73)||(35112979-35113031)
[»] chr7 (43 HSPs)
chr7 (314-387)||(688065-688138)
chr7 (314-393)||(11840453-11840532)
chr7 (314-393)||(21600976-21601055)
chr7 (314-393)||(39651154-39651233)
chr7 (314-387)||(4848350-4848423)
chr7 (309-386)||(17169021-17169098)
chr7 (314-382)||(29467753-29467821)
chr7 (314-393)||(49146128-49146208)
chr7 (333-392)||(9143497-9143556)
chr7 (314-392)||(39276615-39276693)
chr7 (314-382)||(3791481-3791549)
chr7 (317-393)||(29684119-29684195)
chr7 (326-386)||(31899998-31900058)
chr7 (314-386)||(48529946-48530018)
chr7 (314-393)||(27737747-27737826)
chr7 (314-392)||(21670799-21670877)
chr7 (342-382)||(35157012-35157052)
chr7 (334-382)||(44804542-44804590)
chr7 (328-382)||(24684650-24684704)
chr7 (323-392)||(46197428-46197497)
chr7 (334-382)||(34872191-34872239)
chr7 (21-74)||(2846077-2846130)
chr7 (24-73)||(3392468-3392517)
chr7 (21-66)||(12615759-12615804)
chr7 (21-73)||(27704316-27704368)
chr7 (31-75)||(48288428-48288472)
chr7 (31-74)||(9712225-9712268)
chr7 (30-73)||(18223743-18223786)
chr7 (343-382)||(42684816-42684855)
chr7 (31-73)||(3766812-3766854)
chr7 (31-73)||(38889520-38889562)
chr7 (31-73)||(44593509-44593551)
chr7 (24-73)||(24062031-24062080)
chr7 (31-72)||(28479355-28479396)
chr7 (36-73)||(29281375-29281412)
chr7 (31-72)||(29625923-29625964)
chr7 (324-389)||(42912144-42912209)
chr7 (31-71)||(15106718-15106758)
chr7 (335-382)||(19052320-19052368)
chr7 (25-73)||(37300120-37300168)
chr7 (21-73)||(40518906-40518958)
chr7 (346-382)||(47175507-47175543)
chr7 (25-73)||(47641046-47641094)
[»] chr6 (25 HSPs)
chr6 (314-387)||(6969307-6969380)
chr6 (314-393)||(4107956-4108035)
chr6 (322-393)||(9981265-9981336)
chr6 (312-382)||(4897511-4897581)
chr6 (305-392)||(15045553-15045640)
chr6 (314-386)||(1218520-1218592)
chr6 (314-386)||(24443929-24444001)
chr6 (314-393)||(28573834-28573913)
chr6 (318-392)||(34316957-34317031)
chr6 (314-386)||(18323837-18323909)
chr6 (334-378)||(9737773-9737817)
chr6 (31-73)||(28222864-28222906)
chr6 (21-73)||(27094824-27094876)
chr6 (314-393)||(25529243-25529322)
chr6 (30-73)||(27218885-27218928)
chr6 (18-73)||(33697127-33697182)
chr6 (31-73)||(6210055-6210097)
chr6 (31-73)||(9704418-9704460)
chr6 (31-73)||(13732813-13732855)
chr6 (31-73)||(31802054-31802096)
chr6 (335-381)||(33328295-33328341)
chr6 (31-76)||(12284119-12284164)
chr6 (31-72)||(28237279-28237320)
chr6 (31-71)||(361166-361206)
chr6 (31-75)||(3294763-3294807)
[»] chr3 (35 HSPs)
chr3 (314-387)||(8393565-8393638)
chr3 (314-393)||(4139353-4139432)
chr3 (314-393)||(19895651-19895730)
chr3 (314-393)||(26777856-26777935)
chr3 (304-393)||(22519182-22519270)
chr3 (333-387)||(18682510-18682564)
chr3 (317-393)||(53800504-53800580)
chr3 (312-382)||(11955542-11955612)
chr3 (335-382)||(28981834-28981881)
chr3 (305-382)||(22473637-22473714)
chr3 (334-382)||(19368958-19369006)
chr3 (334-382)||(29530578-29530626)
chr3 (334-382)||(35855226-35855274)
chr3 (314-393)||(33872207-33872286)
chr3 (312-382)||(26102167-26102237)
chr3 (324-393)||(55297349-55297418)
chr3 (334-382)||(8528120-8528168)
chr3 (313-393)||(9563227-9563307)
chr3 (314-376)||(11602187-11602249)
chr3 (335-393)||(40831932-40831990)
chr3 (343-392)||(2847341-2847390)
chr3 (31-72)||(11436506-11436547)
chr3 (31-71)||(4200612-4200652)
chr3 (31-73)||(10482880-10482922)
chr3 (31-73)||(28689699-28689741)
chr3 (31-73)||(52974080-52974122)
chr3 (31-72)||(11250618-11250659)
chr3 (345-382)||(15321260-15321297)
chr3 (24-73)||(25638409-25638458)
chr3 (31-72)||(49750433-49750474)
chr3 (32-72)||(1546377-1546417)
chr3 (30-66)||(29559700-29559736)
chr3 (31-71)||(48251575-48251615)
chr3 (21-73)||(51467177-51467229)
chr3 (25-73)||(53163595-53163643)
[»] scaffold0051 (1 HSPs)
scaffold0051 (314-393)||(62064-62143)
[»] scaffold0759 (1 HSPs)
scaffold0759 (314-387)||(5903-5976)
[»] chr2 (30 HSPs)
chr2 (305-393)||(28607214-28607302)
chr2 (314-393)||(10050195-10050274)
chr2 (312-386)||(2952757-2952831)
chr2 (312-382)||(17836967-17837037)
chr2 (316-393)||(18096495-18096572)
chr2 (304-393)||(24520858-24520947)
chr2 (314-386)||(9545788-9545860)
chr2 (308-382)||(19486128-19486202)
chr2 (314-382)||(32677200-32677268)
chr2 (312-382)||(9920926-9920996)
chr2 (314-386)||(4292795-4292867)
chr2 (334-382)||(19486211-19486259)
chr2 (24-74)||(40363091-40363141)
chr2 (334-382)||(10876588-10876634)
chr2 (30-71)||(33222180-33222221)
chr2 (18-74)||(17601079-17601135)
chr2 (25-73)||(33669737-33669785)
chr2 (334-382)||(42781033-42781081)
chr2 (22-73)||(5062298-5062349)
chr2 (31-74)||(17487704-17487747)
chr2 (30-65)||(18559239-18559274)
chr2 (31-74)||(32609214-32609257)
chr2 (31-73)||(5521247-5521289)
chr2 (31-73)||(9330528-9330570)
chr2 (31-73)||(39408717-39408759)
chr2 (25-74)||(29772299-29772348)
chr2 (30-71)||(32168931-32168972)
chr2 (33-74)||(43842122-43842163)
chr2 (31-71)||(29942153-29942193)
chr2 (21-73)||(35798043-35798095)
[»] scaffold0057 (1 HSPs)
scaffold0057 (314-386)||(20592-20664)
[»] chr8 (51 HSPs)
chr8 (317-393)||(7389203-7389279)
chr8 (334-382)||(40587709-40587757)
chr8 (314-393)||(4466426-4466505)
chr8 (334-393)||(41972978-41973037)
chr8 (317-387)||(25616510-25616580)
chr8 (314-392)||(25620721-25620799)
chr8 (314-386)||(18378815-18378887)
chr8 (334-382)||(25346056-25346104)
chr8 (334-382)||(36776426-36776474)
chr8 (328-382)||(8760717-8760771)
chr8 (328-382)||(25836282-25836336)
chr8 (334-382)||(24053936-24053984)
chr8 (328-395)||(8162779-8162846)
chr8 (328-382)||(1942805-1942859)
chr8 (314-392)||(19243237-19243315)
chr8 (314-392)||(19316421-19316499)
chr8 (335-393)||(40616100-40616158)
chr8 (314-385)||(41152670-41152743)
chr8 (21-73)||(7388456-7388508)
chr8 (342-382)||(45435020-45435060)
chr8 (334-393)||(41534254-41534313)
chr8 (328-382)||(32844165-32844219)
chr8 (21-72)||(8698597-8698648)
chr8 (31-74)||(10083163-10083206)
chr8 (31-74)||(13406600-13406643)
chr8 (31-74)||(16432155-16432198)
chr8 (21-76)||(24296885-24296940)
chr8 (31-74)||(31450984-31451027)
chr8 (31-66)||(40740533-40740568)
chr8 (30-73)||(42880949-42880992)
chr8 (335-382)||(44389022-44389069)
chr8 (317-392)||(45298259-45298334)
chr8 (31-73)||(133416-133458)
chr8 (31-73)||(2792780-2792822)
chr8 (31-73)||(8034439-8034481)
chr8 (31-73)||(26567275-26567317)
chr8 (31-73)||(33617973-33618015)
chr8 (31-73)||(34472298-34472340)
chr8 (31-73)||(37290923-37290965)
chr8 (31-73)||(37717364-37717406)
chr8 (18-71)||(3949095-3949148)
chr8 (31-72)||(38344051-38344092)
chr8 (31-72)||(41458297-41458338)
chr8 (24-73)||(43656037-43656086)
chr8 (334-382)||(9472174-9472221)
chr8 (21-73)||(16449126-16449178)
chr8 (31-71)||(19163866-19163906)
chr8 (31-71)||(23435260-23435300)
chr8 (32-72)||(28460203-28460243)
chr8 (21-73)||(38402252-38402304)
chr8 (342-378)||(42245753-42245789)
[»] scaffold0385 (1 HSPs)
scaffold0385 (316-382)||(8317-8383)
[»] scaffold0381 (1 HSPs)
scaffold0381 (328-395)||(9585-9652)
[»] scaffold0069 (1 HSPs)
scaffold0069 (314-385)||(11775-11846)
[»] scaffold0031 (1 HSPs)
scaffold0031 (23-73)||(50020-50070)
[»] scaffold0330 (1 HSPs)
scaffold0330 (30-74)||(6768-6812)
[»] scaffold0429 (1 HSPs)
scaffold0429 (314-392)||(12963-13040)
[»] scaffold0038 (2 HSPs)
scaffold0038 (31-73)||(23362-23404)
scaffold0038 (31-72)||(37441-37482)
[»] scaffold0179 (1 HSPs)
scaffold0179 (25-73)||(5983-6031)
[»] scaffold1787 (1 HSPs)
scaffold1787 (31-73)||(401-443)
[»] scaffold0690 (1 HSPs)
scaffold0690 (31-73)||(3667-3709)
[»] scaffold0294 (1 HSPs)
scaffold0294 (39-73)||(17296-17330)
[»] scaffold0028 (1 HSPs)
scaffold0028 (31-73)||(112109-112151)
[»] scaffold0025 (1 HSPs)
scaffold0025 (21-71)||(65804-65854)
[»] scaffold0121 (1 HSPs)
scaffold0121 (31-72)||(11996-12037)
[»] scaffold0113 (1 HSPs)
scaffold0113 (31-76)||(37075-37120)


Alignment Details
Target: chr1 (Bit Score: 161; Significance: 1e-85; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 18 - 306
Target Start/End: Original strand, 46867868 - 46868151
Alignment:
Q  18 actccaacccccacatataatatgcaatatccctatgaactgagttaagttcacggaaagtcttaactcnnnnnnnnnnnnnnnggtacaaagtcttaat 117  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||               |||||||||||||||     
T  46867868 actccaacccccgcatataatatgcaatatccctatgaactgagttaagttcacggaaagtctcaactctttttttttttttg-ggtacaaagtcttaac 46867966  T
Q  118 tctctttaatagccattttaaatgcttaactgatgcttaaactattgcaaactnnnnnnnnnnnnnnncatactttaactttaactgcttttgcaaaaat 217  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||| |               ||| ||||||||||||||||||||||||||||    
T  46867967 tctctctaatagccattttaaatgcttaactgatgcttaaacttttgcaaattaaaaaaaaaaa----catgctttaactttaactgcttttgcaaaaat 46868062  T
Q  218 aaaatgcttaagttctttttggtgcttctacttctcactaaattaaatatctagatgaactgatgcatgcaataatgtagtgtgaacat 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46868063 aaaatgcttaagttctttttggtgcttctacttctcactaaattaaatatctagatgaactgatgcatgcaataatgtagtgtgaacat 46868151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 47134706 - 47134785
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47134706 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 47134785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 16300391 - 16300470
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||||| |||  |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16300391 tatatacttatattaaaattaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaaattactaattg 16300470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 52306071 - 52306150
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||||||||| | ||| ||| || |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  52306071 tatatacttatataaaaagaaatatccctttaatttaccattttgcccctataaggggcaatttgataaattactaattg 52306150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 1367293 - 1367365
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  1367293 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 1367365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 33075741 - 33075673
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33075741 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 33075673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 1826795 - 1826863
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||||| | |||||||||||||||||||||    
T  1826795 tatatacttatattaaaagtaatgtcccttgaatttaccattttggctctataaggggcaatttggtaa 1826863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 4890100 - 4890172
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  4890100 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcctctattaggggcaatttggtaaatta 4890172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 17364688 - 17364616
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||| ||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  17364688 tatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 17364616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 22198992 - 22198924
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||| ||| | ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  22198992 tatatacttatattaaaagaaatgtcccttgaatttatcattttgcccctataaggggcaatttggtaa 22198924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 29188385 - 29188313
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  29188385 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaatta 29188313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 33359702 - 33359774
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  33359702 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaatta 33359774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 38894777 - 38894825
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38894777 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 38894825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 393
Target Start/End: Original strand, 5426222 - 5426297
Alignment:
Q  318 tacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||| |||||| || ||||||||||||| ||||||||||||||| || |||||||||||||||||||||| |||||    
T  5426222 tactaatataacagttaatgtccattgattttaccattttgcccttagaaggggcaatttggtaaattacaaattg 5426297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 382
Target Start/End: Complemental strand, 46626411 - 46626341
Alignment:
Q  312 tatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||||||| |||  ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  46626411 tatatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 46626341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 382
Target Start/End: Complemental strand, 29844975 - 29844898
Alignment:
Q  305 atctatctatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||| | ||||||||||||| ||| | |||||||  || |||||||||||||||||||||||||||||||||||||    
T  29844975 atctatatctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaa 29844898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 381
Target Start/End: Complemental strand, 19322409 - 19322362
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggta 381  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19322409 aatgtcccttgaatttaccattttgcccctataaggggcaatttggta 19322362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 378
Target Start/End: Original strand, 42678376 - 42678440
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttg 378  Q
    ||||||||||||||||| | |||||||  |||||||||||||||  |||||||||||||||||||    
T  42678376 tatatacttatataaaaagaaatgtcccatgaatttaccattttatccctataaggggcaatttg 42678440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 395
Target Start/End: Original strand, 28570741 - 28570808
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattgtt 395  Q
    |||| ||||||||  |||||||||||||||||||||||||||| |||||||||||  |||| ||||||    
T  28570741 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattgtt 28570808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 43116044 - 43116118
Alignment:
Q  308 tatctatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||||||||||| ||||||||    ||||||||||||||| | ||||||||||||  ||||||||||||||||    
T  43116044 tatctatatatactaatataaaaatacatgtccattgaatttccaattttgcccctaggaggggcaatttggtaa 43116118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 10698192 - 10698131
Alignment:
Q  325 ataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    |||||| | |||||||| | |||||||||||||||||||| |||||||| ||||||||||||    
T  10698192 ataaaaagaaatgtccaataaatttaccattttgcccctagaaggggcattttggtaaatta 10698131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 10766193 - 10766256
Alignment:
Q  319 acttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||||| ||| | |||||||  || ||||||||||||||||||||||||| |||||||||||    
T  10766193 acttatattaaaagaaatgtcctatggatttaccattttgcccctataagggtcaatttggtaa 10766256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 1604244 - 1604295
Alignment:
Q  24 acccccacatataatatgcaatatccctatgaactgagttaagttcacggaaa 76  Q
    ||||| |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  1604244 acccctacatataatatgcaatatcccta-caactgagttaatttcacggaaa 1604295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 7191075 - 7191032
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||    
T  7191075 catataatatgcaatatccctatcaactgagctaaggtcacgga 7191032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 382
Target Start/End: Original strand, 19400754 - 19400801
Alignment:
Q  335 atgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||| |||||||||||||||||||| ||||||||| |||| |||||    
T  19400754 atgtcccttgaatttaccattttgcccatataaggggtaattcggtaa 19400801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 52426940 - 52426983
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||    
T  52426940 catataatatgcaatatccctatcaactgagctaagctcacgga 52426983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 44732676 - 44732634
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  44732676 catataatatgcaatatccctaccaactgagttaagctcacgg 44732634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 47478874 - 47478916
Alignment:
Q  30 acatataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    |||||||||||||||||||||||  |||||||||||| |||||    
T  47478874 acatataatatgcaatatccctaccaactgagttaagctcacg 47478916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 393
Target Start/End: Original strand, 50557858 - 50557907
Alignment:
Q  343 tgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||||||||||| || ||||||||||||||||||||  |||||||||    
T  50557858 tgaatttaccattttgtcc-tataaggggcaatttggtaatctactaattg 50557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 621620 - 621579
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    |||| |||||||||||||||||| ||||||||||| ||||||    
T  621620 cataaaatatgcaatatccctatcaactgagttaaattcacg 621579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 2277797 - 2277752
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacggaaa 76  Q
    ||||||||||||||||||||||  ||||||| |||| |||||||||    
T  2277797 catataatatgcaatatccctaccaactgagctaagctcacggaaa 2277752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 8415772 - 8415731
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    |||||||||||||||||||||| |||||||| |||| |||||    
T  8415772 catataatatgcaatatccctacgaactgagctaagctcacg 8415731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 11215044 - 11214999
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacggaaa 76  Q
    ||||||||||||||||||||||  ||||||| |||| |||||||||    
T  11215044 catataatatgcaatatccctaccaactgagctaagctcacggaaa 11214999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 28867522 - 28867477
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacggaaa 76  Q
    ||||||||||||||||| ||||  ||||||| ||||||||||||||    
T  28867522 catataatatgcaatattcctaccaactgagctaagttcacggaaa 28867477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 15390273 - 15390221
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||  ||| ||||||||||||||||||  |||||||||||| ||||||    
T  15390273 ccaacccctgcatctaatatgcaatatccctaccaactgagttaagctcacgg 15390221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 42054382 - 42054334
Alignment:
Q  25 cccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||| |||||||||||||||||||||||  ||||||| |||| ||||||    
T  42054382 cccctacatataatatgcaatatccctaccaactgagctaagctcacgg 42054334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 51942337 - 51942301
Alignment:
Q  32 atataatatgcaatatccctatgaactgagttaagtt 68  Q
    |||||||||||||||||||||  ||||||||||||||    
T  51942337 atataatatgcaatatccctaccaactgagttaagtt 51942301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 225437 - 225516
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  225437 tatatacttatattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 225516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 382
Target Start/End: Original strand, 108547 - 108617
Alignment:
Q  312 tatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||||||| |||  ||| | ||||||| ||||||||||||||||| ||| |||||||| ||||||||||    
T  108547 tatatatactaataagaaaagaaatgtcccttgaatttaccattttgtccccataaggggtaatttggtaa 108617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 3821283 - 3821204
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3821283 tatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 3821204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 316 - 393
Target Start/End: Original strand, 15704115 - 15704192
Alignment:
Q  316 tatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||||||| ||||||| | || ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15704115 tatacttatataaaaagtaatgttctttaaatttaccattttgcccctataaggggaaatttggtaaattactaattg 15704192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 12682840 - 12682768
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  12682840 tatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaaatta 12682768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 39716802 - 39716730
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  39716802 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 39716730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 46104184 - 46104260
Alignment:
Q  317 atacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||| || ||||||||||||||||||||| |||||    
T  46104184 atactaatataaaagttaatgtccattgattttaccattttgccccaatgaggggcaatttggtaaattacaaattg 46104260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 393
Target Start/End: Complemental strand, 35498625 - 35498538
Alignment:
Q  306 tctatctatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||| |||||||| |||||||| | |||| || ||||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  35498625 tctatctctatatactaatataaaaagaaatggcccttgaatttatcattttgcccctataaaggacaatttggtaaattactaattg 35498538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 5752472 - 5752526
Alignment:
Q  333 taatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattac 387  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5752472 taatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattac 5752526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 379
Target Start/End: Complemental strand, 24948371 - 24948306
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttgg 379  Q
    ||||||||||||||||| | ||||||| |||||||||||||||||| |||||||||||||||||||    
T  24948371 tatatacttatataaaaagaaatgtcctttgaatttaccattttgctcctataaggggcaatttgg 24948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 35833488 - 35833420
Alignment:
Q  324 tataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    |||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||| | |||||||    
T  35833488 tataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaattcactaatt 35833420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 13171621 - 13171695
Alignment:
Q  308 tatctatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||||||||||| |||  |||   ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13171621 tatctatatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 13171695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 29712371 - 29712440
Alignment:
Q  314 tatatacttatat-aaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||| |||| | ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  29712371 tatatacttatattaaaaagaaatgtcccttaaatttaccattttgcccctataaggggcaatttggtaa 29712440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 2116091 - 2116163
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||| || ||  ||||||||||||||||||||    
T  2116091 tatatactaatataaaagttaatgtccattgattttaccattttgtccttaggaggggcaatttggtaaatta 2116163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 3757748 - 3757796
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3757748 aatgttcattgaatttaccattttgcccctataaggggcaatttggtaa 3757796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 39406316 - 39406248
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||||||| | ||||| | ||||||||||||||| |||||||||||||| ||||||||||    
T  39406316 tatatacttatataaaaagaaatgttccttgaatttaccatttagcccctataaggggtaatttggtaa 39406248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 50120022 - 50119974
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50120022 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 50119974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 51347510 - 51347558
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51347510 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 51347558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 8956932 - 8956986
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  8956932 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 8956986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 8986904 - 8986958
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  8986904 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 8986958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 37349802 - 37349856
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37349802 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 37349856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 52799029 - 52799099
Alignment:
Q  316 tatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||| ||| | ||||||| || ||||||||||||| ||||||| ||||||||||||||||||||    
T  52799029 tatacttatattaaaagaaatgtcctttaaatttaccattttacccctattaggggcaatttggtaaatta 52799099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 24547353 - 24547401
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  24547353 aatgtcccttgaatttaccattttgtccctataaggggcaatttggtaa 24547401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 382
Target Start/End: Complemental strand, 30529335 - 30529295
Alignment:
Q  342 ttgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30529335 ttgaatttaccattttgcccctataaggggcaatttggtaa 30529295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 35716383 - 35716315
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||| ||| | ||||| |  || |||||||||||||||||||||||||||||||||||||    
T  35716383 tatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaa 35716315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 366
Target Start/End: Complemental strand, 47560303 - 47560251
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctata 366  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  47560303 tatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctata 47560251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 53991636 - 53991568
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||| ||| | ||||| |  || |||||||||||||||||||||||||||||||||||||    
T  53991636 tatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaa 53991568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 395
Target Start/End: Complemental strand, 9888960 - 9888893
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattgtt 395  Q
    |||| ||||||||  |||||||||||||||||||||||||||| |||||||||||  |||| ||||||    
T  9888960 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattgtt 9888893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 393
Target Start/End: Original strand, 17730463 - 17730514
Alignment:
Q  342 ttgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  17730463 ttgaatttaccattttgctcctataaggggcaatttggtaatctactaattg 17730514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 20588584 - 20588632
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  20588584 aatgtcccttgaattcaccattttgcctctataaggggcaatttggtaa 20588632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 18424923 - 18424966
Alignment:
Q  30 acatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  18424923 acatataatatgcaatatccctaccaactgagttaagttcacgg 18424966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 35207178 - 35207221
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  35207178 catataatatgcaatatccctatcaactgagttaagctcacgga 35207221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 53572354 - 53572397
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  53572354 catataatatgcaatatccctatcaactgagttaagctcacgga 53572397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 54103578 - 54103625
Alignment:
Q  18 actccaacccccacatataatatgcaatatccctatgaactgagttaa 65  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||    
T  54103578 actccaacccctgcatataatatgcaatatccctatcaactgagttaa 54103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 56479253 - 56479294
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  56479253 catataatatgcaatatccctaccaactgagttaagttcacg 56479294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 578657 - 578621
Alignment:
Q  346 atttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||||||||||||||| |||||||||||    
T  578657 atttaccattttgcccctataagggacaatttggtaa 578621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 12167643 - 12167683
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcac 71  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  12167643 catataatatgcaatatccctaccaactgagttaagttcac 12167683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 36743266 - 36743218
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| || |||||||||||||| | |||||||||||||||||||||    
T  36743266 aatgtcccttaaatttaccattttgtctctataaggggcaatttggtaa 36743218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 13578492 - 13578535
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||||||||||||||||  |||||||||||| |||||||    
T  13578492 catataatatgcaatatccctaccaactgagttaagctcacgga 13578535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 19594282 - 19594235
Alignment:
Q  25 cccccacatataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    |||| ||||||||||||||||||| |||| |||||||||||| |||||    
T  19594282 cccctacatataatatgcaatatctctatcaactgagttaagctcacg 19594235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 3036082 - 3036124
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  3036082 catataatatgcaatatccctaccaactgagttaagctcacgg 3036124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 4234312 - 4234354
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||    
T  4234312 catataatatgcaatatccctatcaactgagctaagctcacgg 4234354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 5179909 - 5179951
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||| ||  |||||||||||||||||||    
T  5179909 catataatatgcaatatccttaccaactgagttaagttcacgg 5179951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 11375916 - 11375958
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||    
T  11375916 catataatatgcaatatccctatcaactgagctaagctcacgg 11375958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 39697889 - 39697931
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||    
T  39697889 catataatatgcaatatccctatcaactgagctaagctcacgg 39697931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 50033697 - 50033750
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||| ||||||||  ||||||||||||||||||| ||||| ||||||||||||||    
T  50033697 aaagttaatgtcctatgaatttaccattttgcccttataa-gggcaatttggtaa 50033750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 52798321 - 52798279
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  52798321 catataatatgcaatatccctaccaactgagttaagctcacgg 52798279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 40051672 - 40051623
Alignment:
Q  24 acccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||| |||||||||||||||||||||||  ||||||| |||| ||||||    
T  40051672 acccctacatataatatgcaatatccctaccaactgagctaagctcacgg 40051623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 42381133 - 42381182
Alignment:
Q  24 acccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||| |||||||| ||||||||||||||  ||||||| |||||||||||    
T  42381133 acccctacatataacatgcaatatccctaccaactgagctaagttcacgg 42381182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 8282394 - 8282342
Alignment:
Q  22 caacccccacatataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    |||||||  ||||||||||||||||||| ||| || ||||||||| |||||||    
T  8282394 caacccctgcatataatatgcaatatccttatcaattgagttaagctcacgga 8282342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 31852630 - 31852682
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||||||| ||||||||||||||||| |||||  ||||||| |||| ||||||    
T  31852630 ccaacccctacatataatatgcaataaccctaccaactgagataagctcacgg 31852682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 37310080 - 37310036
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaa 65  Q
    |||||||| |||||||||||||||||||| ||  |||||||||||    
T  37310080 ccaacccctacatataatatgcaatatccataccaactgagttaa 37310036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 40123167 - 40123219
Alignment:
Q  22 caacccccacatataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||| ||||||||||| |||||||| ||| || |||||| ||||||||||    
T  40123167 caacccctacatataatatacaatatccatatcaaatgagtttagttcacgga 40123219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 40994120 - 40994172
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||| || |||||||||||||||||||||||  ||||||| |||| ||||||    
T  40994120 ccaactcctacatataatatgcaatatccctaccaactgagctaagctcacgg 40994172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 42218791 - 42218751
Alignment:
Q  33 tataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||  ||||||| |||||||||||    
T  42218791 tataatatgcaatatccctaccaactgagctaagttcacgg 42218751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 8e-28; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 3088116 - 3088037
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3088116 tatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattattaattg 3088037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 25698802 - 25698730
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  25698802 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 25698730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 30140504 - 30140583
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  30140504 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggtaatttggtaaattactaattg 30140583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 33709898 - 33709819
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||||| |||  |||||||| |||||||||||||||| ||||||||| |||||||||||||||||| ||||||    
T  33709898 tatatacttatattaaaattaatgtcccttgaatttaccattttacccctataaagggcaatttggtaaattagtaattg 33709819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 41689277 - 41689349
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  41689277 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattatgggcaatttggtaaatta 41689349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 382
Target Start/End: Complemental strand, 42977913 - 42977849
Alignment:
Q  315 atatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||||||||||||||  |||||||||||   |||||||||||||||||||||||||||||||||||    
T  42977913 atatacttatataaaagaaaatgtccattg---ttaccattttgcccctataaggggcaatttggtaa 42977849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 12422426 - 12422350
Alignment:
Q  317 atacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||| ||||||||  | |||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||||    
T  12422426 atactaatataaaaattcatgtcctttgattttaccattttgcccctataaggggcaatttggtaatctactaattg 12422350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 12592553 - 12592485
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||||||| | |||||||  ||||||||||| ||| ||||||||||||||||||||||||    
T  12592553 tatatacttatataaaaagaaatgtcccatgaatttaccagtttacccctataaggggcaatttggtaa 12592485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 30754431 - 30754479
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30754431 aatgtcctttgaatttaccattttgcccctataaggggcaatttggtaa 30754479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 36887033 - 36886985
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36887033 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 36886985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 6305520 - 6305466
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  6305520 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 6305466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 43138617 - 43138563
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  43138617 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 43138563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 395
Target Start/End: Complemental strand, 754515 - 754448
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattgtt 395  Q
    |||| ||||||||  |||||||||||||||||||||||||||| |||||||||||  |||| ||||||    
T  754515 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattgtt 754448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 26602253 - 26602196
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataagggg 371  Q
    ||||||||||||||||| | ||||||| |||||||||||||||| ||| |||||||||    
T  26602253 tatatacttatataaaaagaaatgtcccttgaatttaccattttacccttataagggg 26602196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 34727420 - 34727347
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattac 387  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||| |  || ||| ||||||||| ||||||||    
T  34727420 tatatactaatataaaagttaatgtccattgattttaccattttgtctttagaagaggcaatttgataaattac 34727347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 17643450 - 17643402
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  17643450 aatgtcccttgaatttatcattttgcccttataaggggcaatttggtaa 17643402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 386
Target Start/End: Original strand, 34715632 - 34715670
Alignment:
Q  348 ttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34715632 ttaccattttgcccctattaggggcaatttggtaaatta 34715670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 41930148 - 41930106
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||| ||||||||||||||| |||||||||||||||||||    
T  41930148 catataaaatgcaatatccctatcaactgagttaagttcacgg 41930106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 546845 - 546800
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacggaaa 76  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||    
T  546845 catataatatgcaatatccctaccaactgagttaagctcacggaaa 546800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 10241778 - 10241725
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||  ||||||||||||||||||||||  |||||||||||| |||||||    
T  10241778 ccaacccctgcatataatatgcaatatccctaccaactgagttaagctcacgga 10241725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 2363022 - 2362971
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||  ||||||||||||||||||||||  |||||||||||| |||||    
T  2363022 ccaacccctgcatataatatgcaatatccctaccaactgagttaagctcacg 2362971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 11146543 - 11146598
Alignment:
Q  18 actccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||| |||||||| ||||||||||| ||| ||||||| |||| ||||||    
T  11146543 actccaacccctacatataacatgcaatatccttatcaactgagctaagctcacgg 11146598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 4153600 - 4153550
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcac 71  Q
    |||||||  |||||||| ||||||||||||||  |||||||||||||||||    
T  4153600 ccaacccatacatataaaatgcaatatccctaccaactgagttaagttcac 4153550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 5900335 - 5900293
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  5900335 catataatatgcaatatccctaccaactgagttaagctcacgg 5900293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 40091520 - 40091478
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  40091520 catataatatgcaatatccctaccaactgagttaagctcacgg 40091478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 43580921 - 43580879
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  ||||||| |||||||||||    
T  43580921 catataatatgcaatatccctaccaactgagctaagttcacgg 43580879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 6414111 - 6414070
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||||||||||||||||  |||||||||||| |||||    
T  6414111 catataatatgcaatatccctaccaactgagttaagctcacg 6414070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 42158924 - 42158883
Alignment:
Q  32 atataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||||||||||||||||||||  ||||||| |||||||||||    
T  42158924 atataatatgcaatatccctacaaactgagctaagttcacgg 42158883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 43352943 - 43353000
Alignment:
Q  335 atgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    ||||||||||||||| | ||||||||  ||  |||||||||||||||||| |||||||    
T  43352943 atgtccattgaatttccaattttgcctataggaggggcaatttggtaaatcactaatt 43353000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 12891606 - 12891558
Alignment:
Q  25 cccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||| |||||||||||||||||||||||  ||||||| |||| ||||||    
T  12891606 cccctacatataatatgcaatatccctaccaactgagctaagctcacgg 12891558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 26912882 - 26912834
Alignment:
Q  25 cccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||| |||||||||||||||||||||||  || ||||||||| ||||||    
T  26912882 cccctacatataatatgcaatatccctaccaattgagttaagctcacgg 26912834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 35112979 - 35113031
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||  ||||||||||||||||||||||| ||||||  |||| ||||||    
T  35112979 ccaacccctgcatataatatgcaatatccctatcaactgaactaagctcacgg 35113031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 314 - 387
Target Start/End: Original strand, 688065 - 688138
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattac 387  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  688065 tatatactaatataaaagttaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaaattac 688138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 11840532 - 11840453
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11840532 tatatacttctattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattattaattg 11840453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 21601055 - 21600976
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21601055 tatatacttctattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattattaattg 21600976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 39651233 - 39651154
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39651233 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattactaattg 39651154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 314 - 387
Target Start/End: Original strand, 4848350 - 4848423
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattac 387  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  4848350 tatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggtaatttggtaaattac 4848423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 17169021 - 17169098
Alignment:
Q  309 atctatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    |||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  17169021 atctatatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaatta 17169098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 29467753 - 29467821
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29467753 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 29467821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 49146208 - 49146128
Alignment:
Q  314 tatatacttatataaaaggt-aatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||| |||||||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  49146208 tatatactaatataaaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaaattacaaattg 49146128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 9143497 - 9143556
Alignment:
Q  333 taatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9143497 taatatcccttgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 9143556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 314 - 392
Target Start/End: Original strand, 39276615 - 39276693
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  39276615 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaaattacaaatt 39276693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 3791481 - 3791549
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||| ||| | |||||||  || |||||||||||||||||||||||||||||||||||||    
T  3791481 tatatacttatattaaaagaaatgtcctatggatttaccattttgcccctataaggggcaatttggtaa 3791549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 29684195 - 29684119
Alignment:
Q  317 atacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||| |||||||| | ||||| | |||||||||||||||| ||||||||||||||||||||||||  |||||||||    
T  29684195 atactaatataaaaagaaatgtgccttgaatttaccattttacccctataaggggcaatttggtaatctactaattg 29684119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 31900058 - 31899998
Alignment:
Q  326 taaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||| ||||    
T  31900058 taaaaggtaatgtcctttgaatttacaattttgcccctattaggggcaatttggtagatta 31899998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 48530018 - 48529946
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| ||||| ||||||||||||||||||  |||||||||||||||||||    
T  48530018 tatatacttatattaaaagaaatgtcctttgaaattaccattttgcccctattgggggcaatttggtaaatta 48529946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 27737826 - 27737747
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||| ||||||| | || |||| |||||||||||||||| ||||||||| ||  |||||||||||||||||||||    
T  27737826 tatatacttctataaaaagaaaagtcccttgaatttaccattttacccctataaaggataatttggtaaattactaattg 27737747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 314 - 392
Target Start/End: Complemental strand, 21670877 - 21670799
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    ||||||||||||| ||| | ||||||| |||||||||| ||||||||||||||| ||  ||||||||||||||| ||||    
T  21670877 tatatacttatattaaaagaaatgtcccttgaatttactattttgcccctataaaggataatttggtaaattacaaatt 21670799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 382
Target Start/End: Complemental strand, 35157052 - 35157012
Alignment:
Q  342 ttgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35157052 ttgaatttaccattttgcccctataaggggcaatttggtaa 35157012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 44804542 - 44804590
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  44804542 aatgtcccttgaatttaccattttgtccctataaggggcaatttggtaa 44804590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 24684704 - 24684650
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||| ||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  24684704 aaagttaatgtcccatgaatttaccattttgcctctataaggggcaatttggtaa 24684650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 392
Target Start/End: Original strand, 46197428 - 46197497
Alignment:
Q  323 atataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||  || ||||||||||||| | |||||||    
T  46197428 atataaaagttaatgtccattgattttaccattttgcccttaggagaggcaatttggtaattcactaatt 46197497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 34872191 - 34872239
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  34872191 aatgtcctttgaacttaccattttgtccctataaggggcaatttggtaa 34872239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 2846077 - 2846130
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    |||||||| |||||| | ||||||||||||||| ||||||| ||||||||||||    
T  2846077 ccaacccctacatattacatgcaatatccctatcaactgagctaagttcacgga 2846130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 3392517 - 3392468
Alignment:
Q  24 acccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||| |||||||||||||||||||| ||| |||||||||||| ||||||    
T  3392517 acccctacatataatatgcaatatccatatcaactgagttaagctcacgg 3392468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 12615804 - 12615759
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaag 66  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||    
T  12615804 ccaacccctgcatataatatgcaatatccctatcaactgagttaag 12615759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 27704316 - 27704368
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||  ||||||||||||||||| ||||  |||||||||||||||||||    
T  27704316 ccaacccctgcatataatatgcaatattcctaccaactgagttaagttcacgg 27704368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 48288428 - 48288472
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacggaa 75  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||    
T  48288428 catataatatgcaatatccctaccaactgagttaagctcacggaa 48288472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 9712225 - 9712268
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||||||||||||||||  |||||||||||| |||||||    
T  9712225 catataatatgcaatatccctaccaactgagttaagctcacgga 9712268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 18223743 - 18223786
Alignment:
Q  30 acatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||||||||||||||||||||||  |||||||||||| ||||||    
T  18223743 acatataatatgcaatatccctaccaactgagttaagctcacgg 18223786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 42684816 - 42684855
Alignment:
Q  343 tgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  42684816 tgaatttaccattttgcccctataaggggcattttagtaa 42684855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 3766854 - 3766812
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  3766854 catataatatgcaatatccctaccaactgagttaagctcacgg 3766812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 38889520 - 38889562
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  38889520 catataatatgcaatatccctaccaactgagttaagctcacgg 38889562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 44593509 - 44593551
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||||||||||||||||| |||| |||||||||||| ||||||    
T  44593509 catataatatgcaatatctctattaactgagttaagctcacgg 44593551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 24062031 - 24062080
Alignment:
Q  24 acccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||| |||||||||||||||||||||||  ||||||| |||| ||||||    
T  24062031 acccctacatataatatgcaatatccctactaactgagctaagctcacgg 24062080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 28479355 - 28479396
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  28479355 catataatatgcaatatccctgtcaattgagttaagttcacg 28479396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 29281375 - 29281412
Alignment:
Q  36 aatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  29281375 aatatgcaatatccctatcaactgagttaagctcacgg 29281412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 29625964 - 29625923
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||||||||||||||||  |||||||||||| |||||    
T  29625964 catataatatgcaatatccctaccaactgagttaagctcacg 29625923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 389
Target Start/End: Original strand, 42912144 - 42912209
Alignment:
Q  324 tataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattacta 389  Q
    ||||||| || ||||||||||| |||||| |||||||| ||  |||||||||||| ||| ||||||    
T  42912144 tataaaaagtgatgtccattgattttacctttttgcccttaagaggggcaatttgctaatttacta 42912209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 15106718 - 15106758
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcac 71  Q
    ||||||||||||||||||||||  |||||||||||| ||||    
T  15106718 catataatatgcaatatccctaccaactgagttaagctcac 15106758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 382
Target Start/End: Complemental strand, 19052368 - 19052320
Alignment:
Q  335 atgtccattgaatttaccattttgcccc-tataaggggcaatttggtaa 382  Q
    ||||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  19052368 atgtccattgaatttccaattttgccccatatgaggggcaatttggtaa 19052320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 37300120 - 37300168
Alignment:
Q  25 cccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||| |||||||||||||||||||||||  ||||||| |||| ||||||    
T  37300120 cccctacatataatatgcaatatccctaccaactgagctaagctcacgg 37300168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 40518906 - 40518958
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||||||| ||||||| |||||||| ||||||  ||||||| |||||||||||    
T  40518906 ccaacccctacatatattatgcaatgtccctaccaactgagctaagttcacgg 40518958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 47175543 - 47175507
Alignment:
Q  346 atttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||| |||||||||||| |||||||||||||||||    
T  47175543 atttacaattttgcccctagaaggggcaatttggtaa 47175507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 47641094 - 47641046
Alignment:
Q  25 cccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||| |||||||||||||||||||||||  ||||||| |||| ||||||    
T  47641094 cccctacatataatatgcaatatccctaccaactgagctaagctcacgg 47641046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 6969380 - 6969307
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattac 387  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6969380 tatatactaatataaaagttaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattac 6969307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 4107956 - 4108035
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||    
T  4107956 tatatactaatataaaagttaatgtccattgattttaccatttttcccctatgaggggcaatttggtaaattacaaattg 4108035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 9981336 - 9981265
Alignment:
Q  322 tatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  9981336 tatataaaaggaaatgttcattgaatttaccattttacccctataaggggcaatttggtaaattgctaattg 9981265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 312 - 382
Target Start/End: Complemental strand, 4897581 - 4897511
Alignment:
Q  312 tatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4897581 tatatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 4897511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 392
Target Start/End: Complemental strand, 15045640 - 15045553
Alignment:
Q  305 atctatctatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    |||||| | ||||||||||||| ||| | ||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  15045640 atctatatctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaaattacaaatt 15045553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 1218520 - 1218592
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  1218520 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaatta 1218592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 24443929 - 24444001
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||| ||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  24443929 tatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 24444001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 28573913 - 28573834
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||| ||||||||| |||| ||| |||| ||||||||||||||||||  ||||||||||||||||||||| |||||    
T  28573913 tatatactgatataaaagttaatatcctttgattttaccattttgcccctaggaggggcaatttggtaaattacaaattg 28573834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 34316957 - 34317031
Alignment:
Q  318 tacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    |||| |||||||| || ||||||||||| |||||| |||||||||||  |||||||||||||||| |||||||||    
T  34316957 tactaatataaaaagtgatgtccattgattttacctttttgcccctaagaggggcaatttggtaatttactaatt 34317031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 18323837 - 18323909
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| |   ||||||||||||||||    
T  18323837 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaaaagcaatttggtaaatta 18323909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 378
Target Start/End: Complemental strand, 9737817 - 9737773
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttg 378  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||    
T  9737817 aatgtcccttgaatttaccattttgtccctataaggggcaatttg 9737773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 28222906 - 28222864
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  28222906 catataatatgcaatatccctaccaactgagttaagttcacgg 28222864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 27094824 - 27094876
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||  ||||||||||||||||||||||  |||||||||||| ||||||    
T  27094824 ccaacccctgcatataatatgcaatatccctaccaactgagttaagctcacgg 27094876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 25529243 - 25529322
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||| ||||||||    |||||| |||  ||||| ||||||| ||||||||||||||||||||||  |||||||||    
T  25529243 tatatactaatataaaaatccatgtccgttgcttttacgattttgctcctataaggggcaatttggtaatctactaattg 25529322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 27218928 - 27218885
Alignment:
Q  30 acatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||    
T  27218928 acatataatatgcaatatccctatcaactgagctaaggtcacgg 27218885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 33697127 - 33697182
Alignment:
Q  18 actccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||| |||||  ||||||| ||||||||||||||| |||||||||||| ||||||    
T  33697127 actccgacccctgcatataaaatgcaatatccctatcaactgagttaagctcacgg 33697182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 6210097 - 6210055
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  ||||||| |||||||||||    
T  6210097 catataatatgcaatatccctaccaactgagctaagttcacgg 6210055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 9704460 - 9704418
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  ||||||| |||||||||||    
T  9704460 catataatatgcaatatccctaccaactgagctaagttcacgg 9704418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 13732855 - 13732813
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  13732855 catataatatgcaatatccctaccaactgagttaagctcacgg 13732813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 31802096 - 31802054
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  31802096 catataatatgcaatatccctaccaactgagttaagctcacgg 31802054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 381
Target Start/End: Complemental strand, 33328341 - 33328295
Alignment:
Q  335 atgtccattgaatttaccattttgcccctataaggggcaatttggta 381  Q
    |||||| || ||||||||||||||| |||| ||||||||||||||||    
T  33328341 atgtcctttaaatttaccattttgctcctacaaggggcaatttggta 33328295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 12284164 - 12284119
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacggaaa 76  Q
    |||||||||| |||||||||||  |||||||||||| |||||||||    
T  12284164 catataatattcaatatccctaccaactgagttaagctcacggaaa 12284119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 28237279 - 28237320
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||||||||||||||||  |||||||||||| |||||    
T  28237279 catataatatgcaatatccctaccaactgagttaagctcacg 28237320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 361206 - 361166
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcac 71  Q
    ||||||||||||||||||||||  |||||||||||| ||||    
T  361206 catataatatgcaatatccctaccaactgagttaagctcac 361166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 3294807 - 3294763
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacggaa 75  Q
    ||||||||||||||||||||||  ||||||| |||| ||||||||    
T  3294807 catataatatgcaatatccctaccaactgagctaagctcacggaa 3294763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 314 - 387
Target Start/End: Original strand, 8393565 - 8393638
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattac 387  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8393565 tatatactaatataaaagttaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaaattac 8393638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 4139432 - 4139353
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||||| |||||    
T  4139432 tatatactaatataaaagttaatgtccattgattttaccattttgtccctattaggggcaatttggtaaattacaaattg 4139353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 19895730 - 19895651
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  19895730 tatatacttatatagaagaaaatgtccattgaatttaccattttgcccttataaagggcaatttggtaaattagtaattg 19895651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 26777935 - 26777856
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||| ||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  26777935 tatatactaatataaaagttaacgtccattgattttaccattttgcccctatgaggggcaatttggtaaattacaaattg 26777856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 22519182 - 22519270
Alignment:
Q  304 catctatctatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||| | ||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  22519182 catctatatctatatacttctattaaaag-aatgtccattgaatttaccattttgcccctataaggggcaatttagtaaattattaattg 22519270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 18682510 - 18682564
Alignment:
Q  333 taatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattac 387  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18682510 taatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattac 18682564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 53800504 - 53800580
Alignment:
Q  317 atacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||| ||||||||| ||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||| |||||    
T  53800504 atactaatataaaagttaatgtccattgattttaccattttgcccttaggaggggcaatttggtaaattacaaattg 53800580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 382
Target Start/End: Complemental strand, 11955612 - 11955542
Alignment:
Q  312 tatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||||| ||| | |||||||  || |||||||||||||||||||||||||||||||||||||    
T  11955612 tatatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaa 11955542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 382
Target Start/End: Complemental strand, 28981881 - 28981834
Alignment:
Q  335 atgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  28981881 atgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 28981834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 22473637 - 22473714
Alignment:
Q  305 atctatctatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||| | ||||||||||||| ||| | ||||| |  || |||||||||||||||||||||||||||||||||||||    
T  22473637 atctatatctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaa 22473714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 19369006 - 19368958
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  19369006 aatgtcccttgattttaccattttgcccctataaggggcaatttggtaa 19368958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 29530626 - 29530578
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  29530626 aatgtcccttgaatttaccattttgtccctataaggggcaatttggtaa 29530578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 35855226 - 35855274
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  35855226 aatgtcccttaaatttaccattttgcccctataaggggcaatttggtaa 35855274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 33872207 - 33872286
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||| |||||||| | |||||||  |||||||||||||||| ||||| ||||| || |||||||||||| ||||||    
T  33872207 tatatactaatataaaaagaaatgtccgatgaatttaccattttgtccctagaagggccattttggtaaattaataattg 33872286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 382
Target Start/End: Complemental strand, 26102237 - 26102167
Alignment:
Q  312 tatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||||||| |||  ||| | ||||||| ||||||||||||||||||||||||||| || ||||||||||    
T  26102237 tatatatactaataagaaaagaaatgtcctttgaatttaccattttgcccctataagaggtaatttggtaa 26102167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 393
Target Start/End: Complemental strand, 55297418 - 55297349
Alignment:
Q  324 tataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||| | ||||||| | |||||||||||||| ||||||||| ||| |||||||||||||| ||||||    
T  55297418 tataaaaagaaatgtccctcgaatttaccattttacccctataaagggtaatttggtaaattattaattg 55297349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 8528168 - 8528120
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| |||||||||||||| || |||||||||||||||||||||||    
T  8528168 aatgtcccttgaatttaccattctgtccctataaggggcaatttggtaa 8528120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 9563227 - 9563307
Alignment:
Q  313 atatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||| |||||||| |  ||||| ||| ||||||||||||||||| || || ||||| |||||||||||| ||||||    
T  9563227 atatatactaatataaaaagagatgtctattaaatttaccattttgcccatagaaagggcattttggtaaattattaattg 9563307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 376
Target Start/End: Complemental strand, 11602249 - 11602187
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatt 376  Q
    |||||||| ||||||||    |||||| |||| ||||||||||||||||||||||||||||||    
T  11602249 tatatactaatataaaaatccatgtccgttgattttaccattttgcccctataaggggcaatt 11602187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 40831990 - 40831932
Alignment:
Q  335 atgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||| |||||||||||||||||| |||||||||| ||||| |||||  |||||||||    
T  40831990 atgtcccttgaatttaccattttgctcctataagggacaattcggtaatctactaattg 40831932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 2847390 - 2847341
Alignment:
Q  343 tgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    ||||||| ||||||||||||||  |||||||||||||||| |||||||||    
T  2847390 tgaattttccattttgcccctaagaggggcaatttggtaatttactaatt 2847341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 11436547 - 11436506
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  11436547 catataatatgcaatatccctaccaactgagttaagttcacg 11436506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 4200612 - 4200652
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcac 71  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  4200612 catataatatgcaatatccctaccaactgagttaagttcac 4200652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 10482880 - 10482922
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  ||||||| |||||||||||    
T  10482880 catataatatgcaatatccctaccaactgagctaagttcacgg 10482922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 28689699 - 28689741
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  ||||||| |||||||||||    
T  28689699 catataatatgcaatatccctaccaactgagctaagttcacgg 28689741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 52974080 - 52974122
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  52974080 catataatatgcaatatccctaccaactgagttaagctcacgg 52974122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 11250618 - 11250659
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  11250618 catataatatgcaatatccctaccaactgagctaagttcacg 11250659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 15321297 - 15321260
Alignment:
Q  345 aatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  15321297 aatttacaattttgcccctataaggggcaatttagtaa 15321260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 25638409 - 25638458
Alignment:
Q  24 acccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||| ||||||||||||||||||| |||  || ||||||||||||||||    
T  25638409 acccctacatataatatgcaatatctctaccaattgagttaagttcacgg 25638458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 49750433 - 49750474
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||||||||||||||||| ||||||| |||| |||||    
T  49750433 catataatatgcaatatccctatcaactgagctaagctcacg 49750474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 1546417 - 1546377
Alignment:
Q  32 atataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    |||||||||| ||||||| ||| ||||||||||||||||||    
T  1546417 atataatatgtaatatccatattaactgagttaagttcacg 1546377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 29559700 - 29559736
Alignment:
Q  30 acatataatatgcaatatccctatgaactgagttaag 66  Q
    |||||||||||||||||||||||  ||||||||||||    
T  29559700 acatataatatgcaatatccctaccaactgagttaag 29559736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 48251615 - 48251575
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcac 71  Q
    ||||||||||||||||||||||| ||||||| |||| ||||    
T  48251615 catataatatgcaatatccctatcaactgagctaagctcac 48251575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 51467229 - 51467177
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||  ||||||| |||| |||||||||| ||||||| |||||||||||    
T  51467229 ccaacccctgcatataaaatgcgatatccctatcaactgagctaagttcacgg 51467177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 53163643 - 53163595
Alignment:
Q  25 cccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||| |||||||||||||||||||||||  ||||||| |||| ||||||    
T  53163643 cccctacatataatatgcaatatccctaccaactgagctaagctcacgg 53163595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 62064 - 62143
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  62064 tatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaaattacaaattg 62143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0759 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 5976 - 5903
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattac 387  Q
    |||||||| ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  5976 tatatactaatataaaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaaattac 5903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 28607214 - 28607302
Alignment:
Q  305 atctatctatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||| | ||||||||||||| |||   ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  28607214 atctatatctatatacttatattaaaataaatgtccattgaatttaccattttgtccctataaggggcaatttggtaaattacaaattg 28607302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 10050274 - 10050195
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  10050274 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttgataaattactaattg 10050195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 312 - 386
Target Start/End: Original strand, 2952757 - 2952831
Alignment:
Q  312 tatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||||| ||| | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  2952757 tatatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 2952831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 312 - 382
Target Start/End: Original strand, 17836967 - 17837037
Alignment:
Q  312 tatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17836967 tatatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 17837037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 316 - 393
Target Start/End: Original strand, 18096495 - 18096572
Alignment:
Q  316 tatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  18096495 tatacttatataaaaagaaatgtcctttgaatttaccattttgcccctataaggggtaatttggcaaattattaattg 18096572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 24520858 - 24520947
Alignment:
Q  304 catctatctatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||| | ||||||||||||||||| | ||||||| |||||||||  |||||||| |||||||| |||||||||||||||||||||||    
T  24520858 catctatatctatatacttatataaaaagaaatgtcccttgaatttataattttgcctctataaggagcaatttggtaaattactaattg 24520947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 9545860 - 9545788
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  9545860 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 9545788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 19486202 - 19486128
Alignment:
Q  308 tatctatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||  ||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  19486202 tatctataattacttatataaaagaaaatatccattgaatttatcattttgcccctataaggggcaatttggtaa 19486128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 32677268 - 32677200
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||| |||   ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32677268 tatatacttatattaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 32677200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 382
Target Start/End: Complemental strand, 9920996 - 9920926
Alignment:
Q  312 tatatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||||| ||| | |||||||  || |||||||||||||||||||||||||||||||||||||    
T  9920996 tatatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaa 9920926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 4292867 - 4292795
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||| ||||| | ||||||||||||||||||    
T  4292867 tatatacttatattaaaagaaatgtcctttgaatttaccattttgctcctattaagggcaatttggtaaatta 4292795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 19486211 - 19486259
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19486211 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 19486259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 40363091 - 40363141
Alignment:
Q  24 acccccacatataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||| |||||||||||||||||||||||  |||||||||||| |||||||    
T  40363091 acccctacatataatatgcaatatccctaccaactgagttaagctcacgga 40363141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 10876634 - 10876588
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||    
T  10876634 aatgtcccttgaatttaccattttgcccc--taaggggcaatttggtaa 10876588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 33222180 - 33222221
Alignment:
Q  30 acatataatatgcaatatccctatgaactgagttaagttcac 71  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  33222180 acatataatatgcaatatccctaccaactgagttaagttcac 33222221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 17601135 - 17601079
Alignment:
Q  18 actccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||| |||||  ||||| ||||||||||||||||  ||||||||||||||||||||    
T  17601135 actccgacccctgcatatgatatgcaatatccctaccaactgagttaagttcacgga 17601079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 33669785 - 33669737
Alignment:
Q  25 cccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||| |||||||||||||||||||||||  |||||||||||| ||||||    
T  33669785 cccctacatataatatgcaatatccctactaactgagttaagctcacgg 33669737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 42781033 - 42781081
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| ||||||||| ||||||| |||| ||||||||||||||||||    
T  42781033 aatgtcccttgaatttatcattttgtccctgtaaggggcaatttggtaa 42781081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 5062349 - 5062298
Alignment:
Q  22 caacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||| | |||||||||||||||||||||  |||||||||||| ||||||    
T  5062349 caacccctatatataatatgcaatatccctaccaactgagttaagctcacgg 5062298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 17487747 - 17487704
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||    
T  17487747 catataatatgcaatatccctaccaactgagctaagttcacgga 17487704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 18559239 - 18559274
Alignment:
Q  30 acatataatatgcaatatccctatgaactgagttaa 65  Q
    |||||||||||||||||||||||| |||||||||||    
T  18559239 acatataatatgcaatatccctatcaactgagttaa 18559274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 32609214 - 32609257
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||||||||||||||||  |||||||||||| |||||||    
T  32609214 catataatatgcaatatccctaccaactgagttaagctcacgga 32609257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 5521247 - 5521289
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||    
T  5521247 catataatatgcaatatccctatcaactgagctaagctcacgg 5521289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 9330528 - 9330570
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||||||||||||||||| |||| |||||||||||| ||||||    
T  9330528 catataatatgcaatatctctatcaactgagttaagctcacgg 9330570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 39408717 - 39408759
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  39408717 catataatatgcaatatccctaccaactgagttaagctcacgg 39408759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 29772299 - 29772348
Alignment:
Q  25 cccccacatataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    |||| |||||||||||||||||||||||  ||||| |||||| |||||||    
T  29772299 ccccgacatataatatgcaatatccctaccaactgtgttaagctcacgga 29772348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 32168972 - 32168931
Alignment:
Q  30 acatataatatgcaatatccctatgaactgagttaagttcac 71  Q
    |||||||||||||||||||||||  |||||||||||| ||||    
T  32168972 acatataatatgcaatatccctaccaactgagttaagctcac 32168931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 43842163 - 43842122
Alignment:
Q  33 tataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    |||||||| |||||||||||  ||||||||||||||||||||    
T  43842163 tataatatacaatatccctaccaactgagttaagttcacgga 43842122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 29942153 - 29942193
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcac 71  Q
    ||||||||||||||||||||||  |||||||||||| ||||    
T  29942153 catataatatgcaatatccctactaactgagttaagctcac 29942193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 35798043 - 35798095
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||  |||||||||||||||||| |||  |||||||||||| ||||||    
T  35798043 ccaacccctgcatataatatgcaatatctctaacaactgagttaagctcacgg 35798095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 20664 - 20592
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  20664 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 20592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 7389203 - 7389279
Alignment:
Q  317 atacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||| |  ||||||||||||||||||||| |||||    
T  7389203 atactaatataaaagttaatgtccattgattttaccattttgccccaaggaggggcaatttggtaaattacaaattg 7389279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 40587757 - 40587709
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40587757 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 40587709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 4466505 - 4466426
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||| ||| ||  ||||||||||||||||||||| |||||    
T  4466505 tatatactaatataaaagttaatgtccattgattttaccattttacccttaggaggggcaatttggtaaattacaaattg 4466426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 334 - 393
Target Start/End: Original strand, 41972978 - 41973037
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  41972978 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctactaattg 41973037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 387
Target Start/End: Complemental strand, 25616580 - 25616510
Alignment:
Q  317 atacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattac 387  Q
    ||||| ||||||||| ||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||    
T  25616580 atactaatataaaagttaatgtccattgattttaccattttgcccttaagaggggcaatttggtaaattac 25616510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 392
Target Start/End: Complemental strand, 25620799 - 25620721
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    |||| ||| ||||||||| | ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  25620799 tatacactgatataaaagttcatgtccattgattttactattttgcccctatgaggggcaatttggtaaattacaaatt 25620721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 18378887 - 18378815
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 386  Q
    ||||||||||||| ||| | ||||||| ||||||||| ||||||||| |||| ||||||||||||||||||||    
T  18378887 tatatacttatattaaaagaaatgtcctttgaatttatcattttgcctctattaggggcaatttggtaaatta 18378815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 25346056 - 25346104
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25346056 aatgtccattgaatttaccattttgcctctataaggggcaatttggtaa 25346104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 36776426 - 36776474
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36776426 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 36776474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 8760717 - 8760771
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  8760717 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 8760771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 25836336 - 25836282
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  25836336 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 25836282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 24053936 - 24053984
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  24053936 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 24053984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 395
Target Start/End: Complemental strand, 8162846 - 8162779
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattgtt 395  Q
    |||| ||||||||  |||||||||||||||||||||||||||| |||||||||||  |||| ||||||    
T  8162846 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattgtt 8162779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 1942805 - 1942859
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||| ||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  1942805 aaagttaatgtcccatgaatttaccattttgcctctataaggggcaatttggtaa 1942859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 392
Target Start/End: Original strand, 19243237 - 19243315
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    |||||||| |||||||| || |||||  |||| |||||| |||||||||| | |||||||||||||||| |||||||||    
T  19243237 tatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaatttactaatt 19243315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 392
Target Start/End: Original strand, 19316421 - 19316499
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    |||||||| |||||||| || |||||  |||| |||||| |||||||||| | |||||||||||||||| |||||||||    
T  19316421 tatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaatttactaatt 19316499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 40616158 - 40616100
Alignment:
Q  335 atgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  40616158 atgtcccttgaatttaccattttgctcctataagaggcaatttggtaatctactaattg 40616100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 385
Target Start/End: Original strand, 41152670 - 41152743
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggc--aatttggtaaatt 385  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||| |||||| |||| |  |||||||||||||    
T  41152670 tatatacttatataaaaagaaatgtcccttgaatttaccattttgtccctatcagggtcctaatttggtaaatt 41152743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 7388508 - 7388456
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||  ||||||||||||||||||||||  |||||||||||||||||||    
T  7388508 ccaacccctgcatataatatgcaatatccctaccaactgagttaagttcacgg 7388456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 382
Target Start/End: Original strand, 45435020 - 45435060
Alignment:
Q  342 ttgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  45435020 ttgaatttaccattttgcccttataaggggcaatttggtaa 45435060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 393
Target Start/End: Complemental strand, 41534313 - 41534254
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattg 393  Q
    |||||||  ||||||||||||||||| |||||||||| ||||||| ||||||| ||||||    
T  41534313 aatgtcccatgaatttaccattttgctcctataagggacaatttgataaattattaattg 41534254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 32844165 - 32844219
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||| ||||||||  | |||||||||||||||||| |||||||||||||||||||    
T  32844165 aaagttaatgtcccataaatttaccattttgccccgataaggggcaatttggtaa 32844219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 8698597 - 8698648
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    |||||||| |||||||||||||||||||||||  ||||||| |||| |||||    
T  8698597 ccaacccctacatataatatgcaatatccctaccaactgagctaagctcacg 8698648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 10083206 - 10083163
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||||||||||||||||  |||||||||||| |||||||    
T  10083206 catataatatgcaatatccctaccaactgagttaagctcacgga 10083163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 13406643 - 13406600
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||||||||||||||||  |||||||||||| |||||||    
T  13406643 catataatatgcaatatccctaccaactgagttaagctcacgga 13406600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 16432155 - 16432198
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||    
T  16432155 catataatatgcaatatccctaccaactgagctaagttcacgga 16432198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 24296885 - 24296940
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacggaaa 76  Q
    ||||||||  ||||||||||||||||||||||  ||||||| |||| |||||||||    
T  24296885 ccaacccctgcatataatatgcaatatccctactaactgagctaagctcacggaaa 24296940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 31450984 - 31451027
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    ||||||||||||||||||||||  |||||||||||| |||||||    
T  31450984 catataatatgcaatatccctaccaactgagttaagctcacgga 31451027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 40740568 - 40740533
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaag 66  Q
    ||||||||||||||||||||||| ||||||||||||    
T  40740568 catataatatgcaatatccctatcaactgagttaag 40740533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 42880992 - 42880949
Alignment:
Q  30 acatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||||||||||||||||||||||  |||||||||||| ||||||    
T  42880992 acatataatatgcaatatccctaccaactgagttaagctcacgg 42880949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 382
Target Start/End: Complemental strand, 44389069 - 44389022
Alignment:
Q  335 atgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    |||||| |||||||||||||||| ||| ||||||||| ||||||||||    
T  44389069 atgtcccttgaatttaccatttttcccttataaggggtaatttggtaa 44389022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 45298334 - 45298259
Alignment:
Q  317 atacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    ||||| ||||||||  | |||| |||||| |||||| |||| ||||||  |||||||||||||||| |||||||||    
T  45298334 atactaatataaaaaatgatgtacattgattttacctttttacccctaagaggggcaatttggtaatttactaatt 45298259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 133458 - 133416
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||    
T  133458 catataatatgcaatatccctatcaactgagctaagctcacgg 133416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 2792822 - 2792780
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||    
T  2792822 catataatatgcaatatccctatcaactgagctaagctcacgg 2792780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 8034439 - 8034481
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  8034439 catataatatgcaatatccctaccaactgagttaagctcacgg 8034481  T

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Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 26567275 - 26567317
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||    
T  26567275 catataatatgcaatatccctatcaactgagctaagctcacgg 26567317  T

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Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 33618015 - 33617973
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  33618015 catataatatgcaatatccctaccaactgagttaagctcacgg 33617973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 34472340 - 34472298
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  34472340 catataatatgcaatatccctaccaactgagttaagctcacgg 34472298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 37290965 - 37290923
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||    
T  37290965 catataatatgcaatatccctatcaactaagttaagctcacgg 37290923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 37717406 - 37717364
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  37717406 catataatatgcaatatccctaccaactgagttaagctcacgg 37717364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 3949095 - 3949148
Alignment:
Q  18 actccaacccccacatataatatgcaatatccctatgaactgagttaagttcac 71  Q
    |||||||||||   |||||||||||||||||||||  |||||||||||| ||||    
T  3949095 actccaaccccagtatataatatgcaatatccctaccaactgagttaagctcac 3949148  T

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Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 38344092 - 38344051
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||||||||||||||||  |||||||||||| |||||    
T  38344092 catataatatgcaatatccctaccaactgagttaagctcacg 38344051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 41458338 - 41458297
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||||||||||||||||  |||||||||||| |||||    
T  41458338 catataatatgcaatatccctaccaactgagttaagctcacg 41458297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 43656086 - 43656037
Alignment:
Q  24 acccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||| |||||||||||||||||||||||  ||||||| |||| ||||||    
T  43656086 acccctacatataatatgcaatatccctaccaactgagctaagctcacgg 43656037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 9472174 - 9472221
Alignment:
Q  334 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||| ||||| ||||||||||||| |||||| ||||||||||||||    
T  9472174 aatgtcccttgaaattaccattttgcctctataa-gggcaatttggtaa 9472221  T

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Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 16449178 - 16449126
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||  ||||||||||||||||||||||  ||||||| |||| ||||||    
T  16449178 ccaacccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 16449126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 19163906 - 19163866
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcac 71  Q
    ||||| ||||||||||||||||  |||||||||||||||||    
T  19163906 catattatatgcaatatccctaccaactgagttaagttcac 19163866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 23435260 - 23435300
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcac 71  Q
    ||||||||||||||||||||||| ||||||| |||| ||||    
T  23435260 catataatatgcaatatccctatcaactgagctaagctcac 23435300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 28460243 - 28460203
Alignment:
Q  32 atataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    |||||||||||||||||||||  |||||||||||| |||||    
T  28460243 atataatatgcaatatccctaccaactgagttaagctcacg 28460203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 38402304 - 38402252
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||  || |||||||||||||||||||  |||||||||||| ||||||    
T  38402304 ccaacccctgcaaataatatgcaatatccctaccaactgagttaagctcacgg 38402252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 378
Target Start/End: Complemental strand, 42245789 - 42245753
Alignment:
Q  342 ttgaatttaccattttgcccctataaggggcaatttg 378  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  42245789 ttgaattcaccattttgcccctataaggggtaatttg 42245753  T

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Target: scaffold0385 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 382
Target Start/End: Complemental strand, 8383 - 8317
Alignment:
Q  316 tatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 382  Q
    ||||||||||| ||| | |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  8383 tatacttatattaaaagaaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 8317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 395
Target Start/End: Original strand, 9585 - 9652
Alignment:
Q  328 aaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattgtt 395  Q
    |||| ||||||||  |||||||||||||||||||||||||||| |||||||||||  |||| ||||||    
T  9585 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattgtt 9652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 385
Target Start/End: Original strand, 11775 - 11846
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatt 385  Q
    ||||||||||||| ||| | ||||||  |||||||||||||||||||  ||| |||||||||||||||||||    
T  11775 tatatacttatattaaaagaaatgtcatttgaatttaccattttgcctttattaggggcaatttggtaaatt 11846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 50020 - 50070
Alignment:
Q  23 aacccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||||||    
T  50020 aacccctacatataatatgcaatatccctatcaactgagttaagctcacgg 50070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 6812 - 6768
Alignment:
Q  30 acatataatatgcaatatccctatgaactgagttaagttcacgga 74  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  6812 acatataatatgcaatatccctaccaactgagttaagttcacgga 6768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 392
Target Start/End: Original strand, 12963 - 13040
Alignment:
Q  314 tatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaatt 392  Q
    |||||||| ||||| || || ||||| ||||| |||||| |||||||||||  |||||||||||||||| |||||||||    
T  12963 tatatactaatatagaaagtgatgtcaattgattttacc-ttttgcccctaagaggggcaatttggtaatttactaatt 13040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 23404 - 23362
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  23404 catataatatgcaatatccctaccaactgagttaagttcacgg 23362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 37441 - 37482
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||||||||||||||||  |||||||||||| |||||    
T  37441 catataatatgcaatatccctaccaactgagttaagctcacg 37482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 6031 - 5983
Alignment:
Q  25 cccccacatataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||||||||| || |||| |||| ||||||    
T  6031 cccccacatataatatgcaatatccctatcaaatgagctaagctcacgg 5983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1787 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1787
Description:

Target: scaffold1787; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 443 - 401
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||| || |||| |||||||||||    
T  443 catataatatgcaatatccctatcaattgagctaagttcacgg 401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 3709 - 3667
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  3709 catataatatgcaatatccctaccaactgagttaagctcacgg 3667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 17296 - 17330
Alignment:
Q  39 atgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||| |||||||||||||||||||    
T  17296 atgcaatatccctatcaactgagttaagttcacgg 17330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 112151 - 112109
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacgg 73  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  112151 catataatatgcaatatccctaccaactgagttaagctcacgg 112109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 65804 - 65854
Alignment:
Q  21 ccaacccccacatataatatgcaatatccctatgaactgagttaagttcac 71  Q
    |||||||| |||||||||||||||||||||||  ||||||| |||| ||||    
T  65804 ccaacccctacatataatatgcaatatccctaccaactgagctaagctcac 65854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 12037 - 11996
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacg 72  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  12037 catataatatgcaatatccctaccaactgagctaagttcacg 11996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 37075 - 37120
Alignment:
Q  31 catataatatgcaatatccctatgaactgagttaagttcacggaaa 76  Q
    ||||||||||||||||| | ||| |||||||||||| |||||||||    
T  37075 catataatatgcaatattcttatcaactgagttaagctcacggaaa 37120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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