View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13423_high_4 (Length: 483)

Name: NF13423_high_4
Description: NF13423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13423_high_4
NF13423_high_4
[»] chr4 (11 HSPs)
chr4 (15-465)||(18731463-18731913)
chr4 (15-465)||(18679526-18679976)
chr4 (15-465)||(18655436-18655886)
chr4 (17-465)||(18699359-18699807)
chr4 (77-465)||(18724044-18724432)
chr4 (37-224)||(17989250-17989435)
chr4 (37-224)||(18073554-18073739)
chr4 (330-436)||(18073842-18073948)
chr4 (169-431)||(5090960-5091222)
chr4 (330-389)||(17989088-17989147)
chr4 (17-55)||(18724427-18724464)
[»] chr8 (2 HSPs)
chr8 (84-465)||(29273742-29274123)
chr8 (131-281)||(31903732-31903882)
[»] chr1 (3 HSPs)
chr1 (77-465)||(268316-268704)
chr1 (53-436)||(28164351-28164733)
chr1 (56-436)||(28127667-28128042)
[»] chr6 (73 HSPs)
chr6 (16-436)||(27724846-27725267)
chr6 (37-436)||(27718380-27718779)
chr6 (37-436)||(27611003-27611402)
chr6 (79-465)||(26622805-26623191)
chr6 (79-465)||(26728783-26729169)
chr6 (37-421)||(27698510-27698893)
chr6 (79-465)||(26646302-26646694)
chr6 (79-465)||(26752270-26752662)
chr6 (37-436)||(28780926-28781325)
chr6 (15-452)||(26655752-26656191)
chr6 (15-452)||(26761723-26762162)
chr6 (37-436)||(28786065-28786464)
chr6 (37-436)||(28792186-28792585)
chr6 (15-436)||(26802201-26802628)
chr6 (40-435)||(31284078-31284473)
chr6 (15-431)||(27604711-27605135)
chr6 (48-436)||(27678744-27679132)
chr6 (82-435)||(27593022-27593375)
chr6 (37-465)||(26823633-26824055)
chr6 (48-419)||(27706420-27706791)
chr6 (82-421)||(27677630-27677969)
chr6 (48-465)||(27338037-27338454)
chr6 (48-465)||(27398777-27399194)
chr6 (80-436)||(26861446-26861799)
chr6 (37-365)||(27229021-27229347)
chr6 (112-436)||(26884025-26884351)
chr6 (132-436)||(27531198-27531502)
chr6 (144-465)||(25579613-25579934)
chr6 (144-465)||(26055820-26056141)
chr6 (144-465)||(26075790-26076111)
chr6 (144-465)||(26142759-26143080)
chr6 (77-454)||(28139368-28139745)
chr6 (144-436)||(25481636-25481928)
chr6 (144-465)||(26048739-26049060)
chr6 (144-465)||(26069908-26070229)
chr6 (144-465)||(25538434-25538755)
chr6 (106-424)||(28180970-28181288)
chr6 (106-424)||(28185222-28185540)
chr6 (215-377)||(28234529-28234691)
chr6 (166-424)||(28242720-28242978)
chr6 (316-465)||(26937160-26937309)
chr6 (169-368)||(25506978-25507171)
chr6 (224-424)||(28149912-28150111)
chr6 (112-385)||(28325343-28325616)
chr6 (37-224)||(27427816-27428001)
chr6 (168-424)||(28226868-28227124)
chr6 (330-436)||(27427607-27427713)
chr6 (84-396)||(26341975-26342290)
chr6 (217-390)||(28297760-28297933)
chr6 (217-390)||(28514140-28514313)
chr6 (331-428)||(27214498-27214595)
chr6 (331-428)||(27234633-27234730)
chr6 (37-109)||(26055746-26055818)
chr6 (181-465)||(29825958-29826242)
chr6 (37-108)||(25538360-25538431)
chr6 (37-108)||(26048665-26048736)
chr6 (37-108)||(26069834-26069905)
chr6 (37-108)||(26075716-26075787)
chr6 (37-108)||(26142685-26142756)
chr6 (37-108)||(25481562-25481633)
chr6 (331-426)||(26848741-26848836)
chr6 (331-377)||(2184369-2184415)
chr6 (332-426)||(25071741-25071835)
chr6 (334-424)||(26949745-26949835)
chr6 (332-377)||(26975134-26975179)
chr6 (332-398)||(2184980-2185046)
chr6 (88-164)||(26018760-26018836)
chr6 (88-164)||(26139464-26139540)
chr6 (41-112)||(27531501-27531570)
chr6 (196-243)||(27665311-27665358)
chr6 (37-108)||(25579537-25579610)
chr6 (296-377)||(28098429-28098510)
chr6 (331-377)||(27665177-27665223)
[»] scaffold0349 (3 HSPs)
scaffold0349 (16-436)||(3422-3844)
scaffold0349 (37-436)||(14357-14754)
scaffold0349 (37-176)||(8062-8201)
[»] scaffold0277 (2 HSPs)
scaffold0277 (31-436)||(4672-5077)
scaffold0277 (37-436)||(13633-14032)
[»] scaffold0419 (1 HSPs)
scaffold0419 (48-436)||(7323-7711)
[»] scaffold1254 (1 HSPs)
scaffold1254 (48-344)||(10-306)
[»] scaffold0038 (4 HSPs)
scaffold0038 (215-424)||(34690-34899)
scaffold0038 (166-424)||(42882-43140)
scaffold0038 (112-385)||(116658-116931)
scaffold0038 (168-424)||(27366-27622)
[»] scaffold0019 (1 HSPs)
scaffold0019 (112-385)||(58334-58607)
[»] scaffold0003 (2 HSPs)
scaffold0003 (37-224)||(59362-59547)
scaffold0003 (330-436)||(59650-59756)
[»] chr2 (2 HSPs)
chr2 (228-377)||(3279666-3279815)
chr2 (332-377)||(17993744-17993789)
[»] scaffold0713 (1 HSPs)
scaffold0713 (88-164)||(5916-5992)


Alignment Details
Target: chr4 (Bit Score: 419; Significance: 0; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 15 - 465
Target Start/End: Complemental strand, 18731913 - 18731463
Alignment:
Q  15 cacagaccacaaaaacttaaactcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcc 114  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  18731913 cacataccacaaaaacttaaactcatattctgcattctcaaactcttttttcatccagtttctctcgattttcatggctatgcaatcaccttcctcatcc 18731814  T
Q  115 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||    
T  18731813 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctcttactg 18731714  T
Q  215 acaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttat 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  18731713 acaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcat 18731614  T
Q  315 tcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcct 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18731613 tcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcct 18731514  T
Q  415 gttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18731513 gttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 18731463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 15 - 465
Target Start/End: Complemental strand, 18679976 - 18679526
Alignment:
Q  15 cacagaccacaaaaacttaaactcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcc 114  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |    
T  18679976 cacataccacaaaaacttaaactcatattctgcattctcaaactcttttttcatccagtttctctctattttcatggctatgcaatcaccttcctcattc 18679877  T
Q  115 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18679876 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactg 18679777  T
Q  215 acaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttat 314  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  18679776 acaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcat 18679677  T
Q  315 tcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcct 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18679676 tcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgtcttgttttgcct 18679577  T
Q  415 gttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||| ||||||    
T  18679576 gttttctatgtcgtggatcctactcacatatgacatcaaagtggtagttat 18679526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 15 - 465
Target Start/End: Complemental strand, 18655886 - 18655436
Alignment:
Q  15 cacagaccacaaaaacttaaactcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcc 114  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  18655886 cacataccacaaaaacttaaactcatattctgcattctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcc 18655787  T
Q  115 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  18655786 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactg 18655687  T
Q  215 acaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttat 314  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18655686 acaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttat 18655587  T
Q  315 tcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcct 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| |||    
T  18655586 tcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctacaagacaaagggtcgtctcgtttttcct 18655487  T
Q  415 gttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  18655486 gttttctatggcgtggatcctactcacatacgacatcaaactggaagttat 18655436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 17 - 465
Target Start/End: Complemental strand, 18699807 - 18699359
Alignment:
Q  17 cagaccacaaaaacttaaactcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctc 116  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18699807 cagaccacaaaaacttaacctcatattctgcattctcaaactcttttttcatctagtttctctcaattctcatggctatgcaatcaccttcctcatcctc 18699708  T
Q  117 ttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgac 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  18699707 ttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaagctcttactgac 18699608  T
Q  217 aagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattc 316  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  18699607 aagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattc 18699508  T
Q  317 ctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgt 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  18699507 ctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgttcacatcattcactgctacaagacaaaaggtcgtctcgttttgcctgt 18699408  T
Q  417 tttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18699407 tttctatggcgtagatcctactcacatacgacatcaaagtgggagttat 18699359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 77 - 465
Target Start/End: Complemental strand, 18724432 - 18724044
Alignment:
Q  77 tctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcg 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18724432 tctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcg 18724333  T
Q  177 taacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaacca 276  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18724332 taacggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaacca 18724233  T
Q  277 tcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatca 376  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18724232 tcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacatca 18724133  T
Q  377 tgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18724132 tgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacaccaaagtgggagttat 18724044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 37 - 224
Target Start/End: Complemental strand, 17989435 - 17989250
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    ||||||||||||||||||||||||| |  ||||   |||||||||||||||||||| ||||||| ||||| ||  ||||||||||||||||||  |||||    
T  17989435 tcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcattca 17989338  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaat 224  Q
     |||| | ||||||||||  |  | |||||  ||||||||  ||||||| || ||| ||||||  |||||||||| ||||||||||||    
T  17989337 gttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 17989250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 37 - 224
Target Start/End: Original strand, 18073554 - 18073739
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    ||||||||||||||||||||||||| |  ||||   |||||||||||||||||||| ||||||| ||||| ||  ||||||||||||||||||  |||||    
T  18073554 tcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcattca 18073651  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaat 224  Q
     |||| | ||||||||||  |  | |||||  ||||||||  ||||||| || ||| ||||||  |||||||||| ||||||||||||    
T  18073652 gttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 18073739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 330 - 436
Target Start/End: Original strand, 18073842 - 18073948
Alignment:
Q  330 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 429  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||| ||||||||||| || |||||| | || |||||||||||||||| ||| |||    
T  18073842 caactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggtgtg 18073941  T
Q  430 gatccta 436  Q
    || ||||    
T  18073942 gaaccta 18073948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 431
Target Start/End: Complemental strand, 5091222 - 5090960
Alignment:
Q  169 gacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaa 268  Q
    ||||||||| |||||||||||||  |||||||  | |||||   || ||||||||| |||||||||||||||||| | || || ||  |||| ||  |||    
T  5091222 gacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgacagagagcttcagcgaggagaccaaa 5091123  T
Q  269 tcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgt 368  Q
    | | ||| |||||   ||| ||||||||||| |||| |||  | |||   || || |||| | ||||||| |||||||| |||||||| || ||||||||    
T  5091122 taacaccgtcacttctcaaggccattcaagaatctaagattgtcattatcgttttctctaaccactatgcttcttcttcgttttgtttagatgaacttgt 5091023  T
Q  369 ccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgga 431  Q
    ||| || || ||||||| ||||  ||| ||| | || ||||||||| |||||||||| |||||    
T  5091022 ccatattattcactgctccaaggaaaatggttgcctggttttgcctattttctatggtgtgga 5090960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 17989147 - 17989088
Alignment:
Q  330 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaa 389  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||| |||||||||||    
T  17989147 caactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaa 17989088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 18724464 - 18724427
Alignment:
Q  17 cagaccacaaaaacttaaactcatattctgcattctcaa 55  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  18724464 cagaccacaaaaacttaa-ctcatattctgcattctcaa 18724427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 84 - 465
Target Start/End: Complemental strand, 29274123 - 29273742
Alignment:
Q  84 tctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggt 183  Q
    ||||||||||||||||||||||||||| ||||||||| | || ||| ||||||||||||| || ||||||| ||| || ||| ||||||||||| |||||    
T  29274123 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 29274024  T
Q  184 tttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcg 283  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||    
T  29274023 tttattggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcg 29273924  T
Q  284 acaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactg 383  Q
    |||||| |||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29273923 acaatgtcattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 29273824  T
Q  384 ctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29273823 ctacaagacaaagggtcgtctcattttgcctgtcttctatggcgtggatcctactcacatacgacatcaaagtgggagttat 29273742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 281
Target Start/End: Original strand, 31903732 - 31903882
Alignment:
Q  131 gattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacac 230  Q
    ||||||| ||| | |||||||||||||| || |||   ||||||||  | |||||||||||  |||||||||| ||||||  ||| ||||||||||||||    
T  31903732 gattcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacac 31903831  T
Q  231 cttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcact 281  Q
    ||| ||||| ||    || || ||||||||  ||||||||| |||||||||    
T  31903832 ctttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcact 31903882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 273; Significance: 1e-152; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 77 - 465
Target Start/End: Complemental strand, 268704 - 268316
Alignment:
Q  77 tctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcg 176  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| | || ||| ||||  | ||||| || ||||||| |||||| ||| ||||||||||    
T  268704 tctcagttctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcg 268605  T
Q  177 taacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaacca 276  Q
    | | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  268604 tgagggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaacca 268505  T
Q  277 tcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatca 376  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  268504 tcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatca 268405  T
Q  377 tgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
    | ||||||||||||| ||||||||||||  ||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  268404 ttcactgctacaagaaaaagggtcgtctcattttgcccgtcttctatggcgtggatcctactcacatacgacatcaaagtgggagttat 268316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 53 - 436
Target Start/End: Complemental strand, 28164733 - 28164351
Alignment:
Q  53 caaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcct 152  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||| | ||| | |||||| ||||||||| |||||||| ||||||| ||||||||||||||    
T  28164733 caaactcttttctcatccaatttctgtcaattctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttcct 28164634  T
Q  153 cagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctg 252  Q
    ||| || |||||||||||||||||| ||||||| |||||||||||||| ||||| |||   ||||||||||| ||||| |||||||||||  |||| ||     
T  28164633 cagttttaggggcagtgacactcgtgacggtttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatctt 28164534  T
Q  253 caaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcatttt 352  Q
     | ||||| || ||||||| ||| ||| ||  ||| |||||| || | ||| | || |||||||||||||| ||||||||||||||||||||||||||||    
T  28164533 gagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcatttt 28164434  T
Q  353 gtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  28164433 gtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctagttttgcctgttttct-tggcgtggatccta 28164351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 56 - 436
Target Start/End: Complemental strand, 28128042 - 28127667
Alignment:
Q  56 actcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcag 155  Q
    |||||||| ||||||| ||| | ||||||||||||||||||||||||| ||||||      |||| |||||||| ||||||| |||||||||||||||||    
T  28128042 actcttttctcatccaatttttgtcaattctcatggctatgcaatcacattcctc------ttcaatttcctatggattcacataccaagtgttcctcag 28127949  T
Q  156 cttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaa 255  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||  |||||||||||||||||| |||||||||||  || | ||  |     
T  28127948 cttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctttatgacaagggaatccacacattcattgatgattgtaatcttgag 28127849  T
Q  256 agaggggatgaaa-tcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgt 354  Q
    ||||| ||  ||| ||| ||| |||||    || |||||| |||| ||||| || ||||||||||| ||||||| |||||||||||||||||||||||||    
T  28127848 agaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgt 28127749  T
Q  355 ttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  28127748 ttggacgaacttgtgcacatcattcactgctacaagacaaagggtcgcctagttttgcctgttttctttggcgtggatccta 28127667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 254; Significance: 1e-141; HSPs: 73)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 436
Target Start/End: Complemental strand, 27725267 - 27724846
Alignment:
Q  16 acagaccacaaaaacttaa-actcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcc 114  Q
    |||||||||||||| |||  | ||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||||||||||    
T  27725267 acagaccacaaaaatttaccattcatattctgcattctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcc 27725168  T
Q  115 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactg 214  Q
    ||||||||||||||| |||||||||||||||||||||| || || ||||||| |||||||||  |||||||||| ||  |||||||||||||||||||||    
T  27725167 tcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactg 27725068  T
Q  215 acaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttat 314  Q
    ||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||| | || |||||||| |||||    
T  27725067 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttat 27724968  T
Q  315 tcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcct 414  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || |||||||||    
T  27724967 tcctgtgttttctatcaactatgcctattcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcct 27724868  T
Q  415 gttttctatggcgtggatccta 436  Q
    |||||||  |||||||| ||||    
T  27724867 gttttcttcggcgtggaaccta 27724846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 37 - 436
Target Start/End: Complemental strand, 27718779 - 27718380
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| || ||||||    
T  27718779 tcatattctgcattctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctcccatggattca 27718680  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcat 236  Q
    ||||||||||||||||||| || ||||||| |||||||||  || ||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  27718679 cttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcat 27718580  T
Q  237 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactat 336  Q
    |||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||| | || |||||||| |||||||||||||||||||||||||||    
T  27718579 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactat 27718480  T
Q  337 gcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||  |||||||| ||||    
T  27718479 gcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaaccta 27718380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 37 - 436
Target Start/End: Complemental strand, 27611402 - 27611003
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| | ||||||| || ||||||||||||||| ||||||    
T  27611402 tcatattctgcattctcaaactcttttttcatccaatttctctcaattttcatggctatgcaattagcttcctcttcttcttcattttcctatggattca 27611303  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcat 236  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  27611302 cttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcat 27611203  T
Q  237 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactat 336  Q
    |||||||  ||| || | |||||| |||||||||| ||||||||||  ||| |||||| | || |||||||| |||||||||||||||||||||||||||    
T  27611202 tgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactat 27611103  T
Q  337 gcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||  |||||||| ||||    
T  27611102 gcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaaccta 27611003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 79 - 465
Target Start/End: Original strand, 26622805 - 26623191
Alignment:
Q  79 tcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgta 178  Q
    |||||| ||||||||||||||||||| ||||| ||||||||| ||||||||| |||||  |||||||||||||| || ||||| ||||||||||||||      
T  26622805 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26622904  T
Q  179 acggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatc 278  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||    
T  26622905 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatc 26623004  T
Q  279 actcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatg 378  Q
    ||| |||||||| ||  ||||||||||||| ||||||||||||||||||  ||||||||| | |||||||||||||||||| |||||||||||||||||     
T  26623005 acttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcatt 26623104  T
Q  379 cactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
    ||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  26623105 cactgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtggatcctactcacatacggcatcaaactgggagttat 26623191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 79 - 465
Target Start/End: Original strand, 26728783 - 26729169
Alignment:
Q  79 tcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgta 178  Q
    |||||| ||||||||||||||||||| ||||| ||||||||| ||||||||| |||||  |||||||||||||| || ||||| ||||||||||||||      
T  26728783 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26728882  T
Q  179 acggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatc 278  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||    
T  26728883 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatc 26728982  T
Q  279 actcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatg 378  Q
    ||| |||||||| ||  ||||||||||||| ||||||||||||||||||  ||||||||| | |||||||||||||||||| |||||||||||||||||     
T  26728983 acttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcatt 26729082  T
Q  379 cactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
    ||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  26729083 cactgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtggatcctactcacatacggcatcaaactgggagttat 26729169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 37 - 421
Target Start/End: Complemental strand, 27698893 - 27698510
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  27698893 tcatattctgcattctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttcctatggattca 27698795  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcat 236  Q
    |||||||||||||| |||| || ||||||| |||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  27698794 cttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcat 27698695  T
Q  237 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactat 336  Q
    |||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||| | || |||||||| |||||||||||||||||| ||||||||    
T  27698694 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactat 27698595  T
Q  337 gcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 421  Q
    || ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| || ||||||||||||||||    
T  27698594 gcatcttcttcattttgtttggacgaacttgtccacataattcactgctacgagacaaagggtcgcctcgttttgcctgttttct 27698510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 79 - 465
Target Start/End: Original strand, 26646302 - 26646694
Alignment:
Q  79 tcaattctcatggctatgcaatcaccttcctcatcctcttcat------tttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgaca 172  Q
    ||||||||||||||||||||||| |||||||  |||||||| |      |||||||  ||||||| ||||| || ||||||| |||||||||||||||||    
T  26646302 tcaattctcatggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgaca 26646401  T
Q  173 ctcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaa 272  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  |||| ||  | ||||| ||||||||||     
T  26646402 ctcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcac 26646501  T
Q  273 accatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccac 372  Q
    ||||||||||  ||| |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  26646502 accatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccac 26646601  T
Q  373 atcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
    ||||| || ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  26646602 atcattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacggcatcaaagtgggagttat 26646694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 79 - 465
Target Start/End: Original strand, 26752270 - 26752662
Alignment:
Q  79 tcaattctcatggctatgcaatcaccttcctcatcctcttcat------tttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgaca 172  Q
    ||||||||||||||||||||||| |||||||  |||||||| |      |||||||  ||||||| ||||| || ||||||| |||||||||||||||||    
T  26752270 tcaattctcatggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgaca 26752369  T
Q  173 ctcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaa 272  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  |||| ||  | ||||| ||||||||||     
T  26752370 ctcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcac 26752469  T
Q  273 accatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccac 372  Q
    ||||||||||  ||| |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  26752470 accatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccac 26752569  T
Q  373 atcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
    ||||| || ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  26752570 atcattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacggcatcaaagtgggagttat 26752662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 37 - 436
Target Start/End: Original strand, 28780926 - 28781325
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||||||||||||| |  |||||    
T  28780926 tcatattctgaattctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctgcattca 28781025  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcat 236  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||    
T  28781026 cttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcat 28781125  T
Q  237 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactat 336  Q
    |||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||  |||| |||||||| |||||||||||||||||||||||||||    
T  28781126 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactat 28781225  T
Q  337 gcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    ||| ||||   |||||| |||||||||||||| ||||| || || |||||||||||||| ||||| || |||||||||||||||| ||| ||||||||||    
T  28781226 gccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggatccta 28781325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 15 - 452
Target Start/End: Original strand, 26655752 - 26656191
Alignment:
Q  15 cacagaccacaaaaacttaaac--tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcat 112  Q
    |||||||||||||||||||  |  ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  26655752 cacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcat 26655851  T
Q  113 cctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttac 212  Q
    ||||||||||||||||| | || |  ||||||||||||||||| || ||||||| |||||| ||  |||||||||| ||| ||||||||||||||||||     
T  26655852 cctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttat 26655951  T
Q  213 tgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttt 312  Q
    ||| ||||||||||| || ||||||||||||  ||| || |  ||||| |||||||||| |||||||||||  || |||||| |||| || ||||| |||    
T  26655952 tgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggattttt 26656051  T
Q  313 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 412  Q
    |||||  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||   |||||||    
T  26656052 attcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggttgttcggttttgc 26656151  T
Q  413 ctgttttctatggcgtggatcctagtcacatacgacatca 452  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  26656152 ctgttttctatggtgtggatcctactcacatacgacatca 26656191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 15 - 452
Target Start/End: Original strand, 26761723 - 26762162
Alignment:
Q  15 cacagaccacaaaaacttaaac--tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcat 112  Q
    |||||||||||||||||||  |  ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  26761723 cacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcat 26761822  T
Q  113 cctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttac 212  Q
    ||||||||||||||||| | || |  ||||||||||||||||| || ||||||| |||||| ||  |||||||||| ||| ||||||||||||||||||     
T  26761823 cctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttat 26761922  T
Q  213 tgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttt 312  Q
    ||| ||||||||||| || ||||||||||||  ||| || |  ||||| |||||||||| |||||||||||  || |||||| |||| || ||||| |||    
T  26761923 tgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggattttt 26762022  T
Q  313 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 412  Q
    |||||  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||   |||||||    
T  26762023 attcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggttgttcggttttgc 26762122  T
Q  413 ctgttttctatggcgtggatcctagtcacatacgacatca 452  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  26762123 ctgttttctatggtgtggatcctactcacatacgacatca 26762162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 37 - 436
Target Start/End: Original strand, 28786065 - 28786464
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  28786065 tcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggattca 28786164  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcat 236  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||| | ||||||||    
T  28786165 cttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcat 28786264  T
Q  237 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactat 336  Q
    |||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||  |||| |||||||| ||||||||||||||||||||||||||     
T  28786265 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactac 28786364  T
Q  337 gcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    ||| | ||   |||||| |||||||||||||| ||||| || || |||||||||||||| ||||| || |||||||||||||||| ||| || |||||||    
T  28786365 gccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcgatccta 28786464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 37 - 436
Target Start/End: Original strand, 28792186 - 28792585
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  28792186 tcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggattca 28792285  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcat 236  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||| | ||||||||    
T  28792286 cttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcat 28792385  T
Q  237 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactat 336  Q
    |||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||  |||| |||||||| ||||||||||||||||||||||||||     
T  28792386 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactac 28792485  T
Q  337 gcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    ||| | ||   |||||| |||||||||||||| ||||| || || |||||||||||||| ||||| || |||||||||||||||| ||| || |||||||    
T  28792486 gccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcgatccta 28792585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 15 - 436
Target Start/End: Original strand, 26802201 - 26802628
Alignment:
Q  15 cacagaccacaaaaacttaaac--tcatattctgcattctcaaactctttt----ttcatccagtttctctcaattctcatggctatgcaatcaccttcc 108  Q
    |||||||||||||||||||  |  |||||||||||||||||||||||||||    |||||||| |||||| ||||| ||||||||||||| || ||||||    
T  26802201 cacagaccacaaaaacttactcattcatattctgcattctcaaactcttttttttttcatccaatttctcacaattttcatggctatgcagtctccttcc 26802300  T
Q  109 tcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctc 208  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||| |||||||||||||||    
T  26802301 tcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctc 26802400  T
Q  209 ttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggat 308  Q
    ||| ||||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||| |||| ||||| ||    
T  26802401 ttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaat 26802500  T
Q  309 ctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgtt 408  Q
     |||||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| || || ||||| |||||||||||||| || ||     
T  26802501 ttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtc 26802600  T
Q  409 ttgcctgttttctatggcgtggatccta 436  Q
    |||||| |||||| ||| ||||||||||    
T  26802601 ttgcctattttctttggtgtggatccta 26802628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 40 - 435
Target Start/End: Original strand, 31284078 - 31284473
Alignment:
Q  40 tattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcactt 139  Q
    ||||||||||||||||| ||||| ||||||||  ||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||  |||||  |    
T  31284078 tattctgcattctcaaattctttcttcatccatattctctcaaatctcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaat 31284177  T
Q  140 accaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattga 239  Q
    ||||||| ||||| || |||||||| |||||||||||  | ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31284178 accaagtattccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattga 31284277  T
Q  240 tgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcc 339  Q
    |||  |||| || ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||| || |||||||||  ||||||||||    
T  31284278 tgatagtgaacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcc 31284377  T
Q  340 tcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcct 435  Q
    ||||| || ||||||||||||||||||||||||||||| ||||  || |||  ||| ||||| || |||||||| ||||||| |||||||||||||    
T  31284378 tcttcgtcgttttgtttggacgaacttgtccacatcattcacttgtataagcaaaatggtcgcctcgttttgcccgttttctttggcgtggatcct 31284473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 15 - 431
Target Start/End: Complemental strand, 27605135 - 27604711
Alignment:
Q  15 cacagaccacaaaaacttaaac--tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcat 112  Q
    |||||||||||||||||||  |  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  27605135 cacagaccacaaaaacttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattctcatggctatgcaattaccttcctcat 27605036  T
Q  113 cctc------ttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggc 206  Q
    ||||      |||||||||||||  ||||||||||||||||||||| || || ||||||| |||||||||  |||||||||| ||| |||||||||||||    
T  27605035 cctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggc 27604936  T
Q  207 tcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctagg 306  Q
    |||||||||||||||||| || ||||||||||||||   ||| || | |||||| |||||||||| |||| ||||   ||| |||||| | || || |||    
T  27604935 tcttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccagg 27604836  T
Q  307 atctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttg 406  Q
    || ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||| || ||||||| ||||||||||||  | |    
T  27604835 atttttattcctgtgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcattcattgctacacgacaaagggtcgcgtcg 27604736  T
Q  407 ttttgcctgttttctatggcgtgga 431  Q
    ||||||||||||||| ||| |||||    
T  27604735 ttttgcctgttttctttggtgtgga 27604711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 48 - 436
Target Start/End: Original strand, 27678744 - 27679132
Alignment:
Q  48 attctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 147  Q
    |||||||||||||||||||||| | ||||||| || ||||||||||||||||||||||||||| ||| ||||| ||||||||   | ||  ||||||||     
T  27678744 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagta 27678843  T
Q  148 ttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtg 247  Q
    |||||||| ||||| || |||||||||||  ||||||| || ||  |||||||||||||||||||||||||||||||| |||||||||||||| |   ||    
T  27678844 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatg 27678943  T
Q  248 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttc 347  Q
      || |||||||| |||||||||| |||||||||   ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27678944 gtcttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 27679043  T
Q  348 attttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||| ||| ||||| ||||    
T  27679044 attttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttctttggtgtggaaccta 27679132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 82 - 435
Target Start/End: Complemental strand, 27593375 - 27593022
Alignment:
Q  82 attctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgatt-cacttaccaagtgttcctcagcttcaggggcagtgacactcgtaac 180  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||| |||| ||  |||||||| |||||||| ||||| || |||||||||||  ||    
T  27593375 attctcatggctatgcaatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggtac 27593277  T
Q  181 ggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcac 280  Q
    ||||| || ||| |||||||||||||||||||||||||||||||| |||||||||||||||||  ||  || ||||||||  ||||||||| ||||||||    
T  27593276 ggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcac 27593177  T
Q  281 tcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgca 380  Q
    |   ||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||    
T  27593176 ttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattca 27593077  T
Q  381 ctgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcct 435  Q
     |||||||||||||||||||| | ||||||||||||||||| ||| |||||||||    
T  27593076 ttgctacaagacaaagggtcgccctgttttgcctgttttctttggtgtggatcct 27593022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 37 - 465
Target Start/End: Original strand, 26823633 - 26824055
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    |||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||| ||| |||||||      |||| |||| |||   ||||    
T  26823633 tcatattctgcattctcaaactctttcttcgtccaatttctctcaattctcatggctatgcagtcaacttcctc------ttcagtttcatatgatttca 26823726  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcat 236  Q
      ||||||||||| ||||| || || |||  |||||||||  | |  ||||| ||| ||||||||||||||||||| ||||||||||||||||||||  |    
T  26823727 aataccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctcttacagacaagggaatccacaccttttt 26823826  T
Q  237 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactat 336  Q
    |||||| ||||| || |||||||||||| ||||| ||| ||||||| | ||||||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  26823827 tgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaagagtctaggatttttattcctgtgttttctgccaactat 26823926  T
Q  337 gcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    ||||||||||||||||||||||||||||||||||||||||| | |  |||||||  |||||| || || |||||||||||||||||||| |||||||||     
T  26823927 gcctcttcttcattttgtttggacgaacttgtccacatcattcgcgtctacaaggaaaaggggcgcctcgttttgcctgttttctatggtgtggatcctg 26824026  T
Q  437 gtcacatacgacatcaaagtgggagttat 465  Q
    || |||||||||||||  |||||||||||    
T  26824027 gtgacatacgacatcagcgtgggagttat 26824055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 48 - 419
Target Start/End: Complemental strand, 27706791 - 27706420
Alignment:
Q  48 attctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 147  Q
    |||||||||||||||||||||| | ||||||| || ||||||||||||||||||||||| ||| ||| ||||| ||||||||   | ||  ||||||||     
T  27706791 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 27706692  T
Q  148 ttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtg 247  Q
    |||||||| ||||| ||  ||||||||||  ||||||| || ||| |||||||||||||| ||  |||||||||||||||||||||||||||  | | ||    
T  27706691 ttcctcagtttcagaggaggtgacactcggtacggtttcacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 27706592  T
Q  248 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttc 347  Q
    | || |||||| |||||||||||| |||||||||   ||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  27706591 aacttcaaagaagggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 27706492  T
Q  348 attttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgtttt 419  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||||||||    
T  27706491 attttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgtttt 27706420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 82 - 421
Target Start/End: Complemental strand, 27677969 - 27677630
Alignment:
Q  82 attctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacg 181  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||||||   | ||  |||||||| |||||||  ||||| || |||||||||||  |||    
T  27677969 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacg 27677870  T
Q  182 gttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcact 281  Q
    |||| || ||| |||||||||||||||||  |||||||||||||||||||||||||||  | | ||| || ||||||||||||||||||| |||||||||    
T  27677869 gtttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 27677770  T
Q  282 cgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcac 381  Q
       ||| |||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  27677769 tctcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcac 27677670  T
Q  382 tgctacaagacaaagggtcgtcttgttttgcctgttttct 421  Q
    |||||||||||||||||||| || ||| ||||||||||||    
T  27677669 tgctacaagacaaagggtcgcctcgttctgcctgttttct 27677630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 48 - 465
Target Start/End: Complemental strand, 27338454 - 27338037
Alignment:
Q  48 attctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 147  Q
    ||||||||||| ||||||||||   ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | | ||||  ||||| |||    
T  27338454 attctcaaacttttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtg 27338355  T
Q  148 ttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtg 247  Q
    |||||||| || |||| || |||||||| | |||||||||| ||| |||||||||||||||||| ||||||||||||| | |||||||||||||||   |    
T  27338354 ttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacg 27338255  T
Q  248 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttc 347  Q
    | ||  ||||||| ||||||| || ||||||||| | ||| |||||| ||||||||||||| || |||||  | ||||||   |||||||| ||||||||    
T  27338254 atcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttc 27338155  T
Q  348 attttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacga 447  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||   |||||||||||||||||||| | |||||||| |||| |||||    
T  27338154 attttgcttggacgaacttgtccacatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacga 27338055  T
Q  448 catcaaagtgggagttat 465  Q
    ||||| | ||||||||||    
T  27338054 catcagactgggagttat 27338037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 48 - 465
Target Start/End: Complemental strand, 27399194 - 27398777
Alignment:
Q  48 attctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 147  Q
    ||||||||||| ||||||||||   ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | | ||||  ||||| |||    
T  27399194 attctcaaacttttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtg 27399095  T
Q  148 ttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtg 247  Q
    |||||||| || |||| || |||||||| | |||||||||| ||| |||||||||||||||||| ||||||||||||| | |||||||||||||||   |    
T  27399094 ttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacg 27398995  T
Q  248 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttc 347  Q
    | ||  ||||||| ||||||| || ||||||||| | ||| |||||| ||||||||||||| || |||||  | ||||||   |||||||| ||||||||    
T  27398994 atcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttc 27398895  T
Q  348 attttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacga 447  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||   |||||||||||||||||||| | |||||||| |||| |||||    
T  27398894 attttgcttggacgaacttgtccacatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacga 27398795  T
Q  448 catcaaagtgggagttat 465  Q
    ||||| | ||||||||||    
T  27398794 catcagactgggagttat 27398777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 80 - 436
Target Start/End: Original strand, 26861446 - 26861799
Alignment:
Q  80 caattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaa 179  Q
    ||||||| ||||||||||||||||||| ||| ||||||||  |||||||| ||||||  ||||| || |||||||| ||||| || |||||||||||  |    
T  26861446 caattctgatggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggta 26861545  T
Q  180 cggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatca 279  Q
     |||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| || |||||||||||||||||||||  ||||    
T  26861546 tggttttaccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatca 26861645  T
Q  280 ctcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgc 379  Q
    ||||||||||||||| |||||||||| || || |||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||||| |||||      
T  26861646 ctcgacaatgccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtccaaatcatta 26861745  T
Q  380 actgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    ||||   ||||  |||||||||  | ||||||||||||||||||||| |||||||||    
T  26861746 actg---caaggaaaagggtcgcgtcgttttgcctgttttctatggcatggatccta 26861799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 37 - 365
Target Start/End: Original strand, 27229021 - 27229347
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    |||||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||| |||||||||||||| |||||||||||||||| | ||||||    
T  27229021 tcatattctgcattctaaaactctttt--catccaatttctctcaagtctcatggctatacaatcaccttcctcttcctcttcattttcctttggattca 27229118  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcat 236  Q
    |||||||||||||||| || || ||||||| |||||||||  |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  27229119 cttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcat 27229218  T
Q  237 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactat 336  Q
    |||||||  ||| || |||||||| || ||||||| ||||||||||| ||| |||||| | || ||| |||| ||||||||  | ||||||  |||||||    
T  27229219 tgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttttattcccatattttctgccaactat 27229318  T
Q  337 gcctcttcttcattttgtttggacgaact 365  Q
    || |||||||||||||||||| |||||||    
T  27229319 gcatcttcttcattttgtttgaacgaact 27229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 112 - 436
Target Start/End: Original strand, 26884025 - 26884351
Alignment:
Q  112 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctctta 211  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||  | ||||| |||||  ||||||||||||||||||    
T  26884025 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 26884124  T
Q  212 ctgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctt 311  Q
    || ||||||||||||||||||||||||||||   | | || | ||||||    ||||||| ||||||||||  ||| |||||| |||| ||||| || ||    
T  26884125 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 26884224  T
Q  312 tattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccaca--tcatgcactgctacaagacaaagggtcgtcttgttt 409  Q
    ||||||  | ||||||| ||||||||| ||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||||||||||| || ||||    
T  26884225 tattccaatattttctaccaactatgcatcttcttcattttgtttggacgaacttgtccacatgtcattcactgctacgagacaaagggtcgcctcgttt 26884324  T
Q  410 tgcctgttttctatggcgtggatccta 436  Q
    ||||||||||   ||| ||||||||||    
T  26884325 tgcctgtttttgttggtgtggatccta 26884351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 132 - 436
Target Start/End: Complemental strand, 27531502 - 27531198
Alignment:
Q  132 attcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacacc 231  Q
    |||||||||||||||||||||||| || ||||||   ||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||| | |||    
T  27531502 attcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatacc 27531403  T
Q  232 ttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatca 331  Q
    ||||||||||||  ||| || |||||||| |||||||||| |||||||||  | ||||||||| || | |||||||| |||||||| || ||||||   |    
T  27531402 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaaa 27531303  T
Q  332 actatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgga 431  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||  || |||||| | ||||||||| |||||||||||||||||||   ||| |||||    
T  27531302 actatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgctacgatacaaagggttgtcttgttttgcctgtttttattggtgtgga 27531203  T
Q  432 tccta 436  Q
    |||||    
T  27531202 tccta 27531198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 144 - 465
Target Start/End: Original strand, 25579613 - 25579934
Alignment:
Q  144 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgac 243  Q
    |||||||||||| ||||| |||||||||||||| |||  |||||| ||  ||||||| |||||||||  |||||||||||| |  |||||| |||||||     
T  25579613 agtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgat 25579712  T
Q  244 cgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctctt 343  Q
      ||| || |||||||| |||||||||| ||||||||| | ||| |||||| |||| |||||||| ||||||||  | ||||||  ||||||||| ||||    
T  25579713 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatctt 25579812  T
Q  344 cttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacat 443  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || ||||| ||||||||||  ||||| |||| ||||||    
T  25579813 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacat 25579912  T
Q  444 acgacatcaaagtgggagttat 465  Q
    ||||||||| ||||||||||||    
T  25579913 acgacatcagagtgggagttat 25579934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 144 - 465
Target Start/End: Original strand, 26055820 - 26056141
Alignment:
Q  144 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgac 243  Q
    |||||||||||  |||||||||||||||||||| |||  |||||| ||  ||||||| |||||||||  ||||||||||||  | || |||||||||||     
T  26055820 agtgttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26055919  T
Q  244 cgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctctt 343  Q
      ||| || |||||||| |||||||||| | ||||||| | ||| |||||  |||| ||| |||| ||||||||  | ||||||  ||||||||| ||||    
T  26055920 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatctt 26056019  T
Q  344 cttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacat 443  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||| || |  | || ||||| ||||||||||  ||||| |||| ||||||    
T  26056020 cttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacat 26056119  T
Q  444 acgacatcaaagtgggagttat 465  Q
    ||||||||| ||||||||||||    
T  26056120 acgacatcagagtgggagttat 26056141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 144 - 465
Target Start/End: Original strand, 26075790 - 26076111
Alignment:
Q  144 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgac 243  Q
    |||||||||||  |||||||||||||||||||| |||  |||||| ||  ||||||| |||||||||  ||||||||||||  | || |||||||||||     
T  26075790 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26075889  T
Q  244 cgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctctt 343  Q
      ||| || |||||||| |||||||||| | ||||||| | ||| |||||  |||| ||| |||| ||||||||  | ||||||  ||||||||| ||||    
T  26075890 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatctt 26075989  T
Q  344 cttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacat 443  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||| || |  | || ||||| ||||||||||  ||||| |||| ||||||    
T  26075990 cttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacat 26076089  T
Q  444 acgacatcaaagtgggagttat 465  Q
    ||||||||| ||||||||||||    
T  26076090 acgacatcagagtgggagttat 26076111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 144 - 465
Target Start/End: Original strand, 26142759 - 26143080
Alignment:
Q  144 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgac 243  Q
    |||||||||||| |||||||||||||||||||| |||   ||||| ||  ||||||| |||||||||  |||||||||||| |  || |||||||||||     
T  26142759 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgat 26142858  T
Q  244 cgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctctt 343  Q
      ||| ||  ||||||| |||||||||| ||||||||| | ||| |||||| |||| |||||||| ||||||||  | ||||||  ||||||||| ||||    
T  26142859 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatctt 26142958  T
Q  344 cttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacat 443  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || || || ||||||||||  ||||| |||| ||||||    
T  26142959 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacat 26143058  T
Q  444 acgacatcaaagtgggagttat 465  Q
    |||| |||| ||||||| ||||    
T  26143059 acgaaatcagagtgggatttat 26143080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 77 - 454
Target Start/End: Original strand, 28139368 - 28139745
Alignment:
Q  77 tctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcg 176  Q
    |||| ||| |||||||| ||||| ||||||| || ||  |||| || |||||| | ||||| ||| | || || ||||||||||| ||||||||||||||    
T  28139368 tctctattttcatggctttgcaaccaccttcttcttctacttctttctcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcg 28139467  T
Q  177 taacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaacca 276  Q
    |  |||||| |||||  |||||||||| ||||||  ||||   ||||||||||| || ||||||||  | || || ||| |||| || |||||   |||     
T  28139468 tttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccg 28139567  T
Q  277 tcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatca 376  Q
    |||||||  || |||||| |||| |||||||| || || ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  28139568 tcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtccacatca 28139667  T
Q  377 tgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaa 454  Q
    |  |||||| ||| ||||||||  || | |||||||||||||||||||| |||||||||  |||||| ||||||||||    
T  28139668 ttgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaa 28139745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 144 - 436
Target Start/End: Original strand, 25481636 - 25481928
Alignment:
Q  144 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgac 243  Q
    |||||||||||  |||||||||||||||||||| |||  |||||| ||  ||||||| |||||||||  |||||||||||| |  || |||||||||||     
T  25481636 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaa 25481735  T
Q  244 cgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctctt 343  Q
      ||| || |||||||| |||||||||| ||||||||| | ||| |||||| |||| |||||||| | ||||||  | ||||||  ||||||||| ||||    
T  25481736 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatctt 25481835  T
Q  344 cttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || || || ||||||||||| ||||||||||    
T  25481836 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattacccgttttctatggtgtggatccta 25481928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 144 - 465
Target Start/End: Original strand, 26048739 - 26049060
Alignment:
Q  144 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgac 243  Q
    |||||||||||| |||||||||||||||||||| |||  |||||| ||  ||||||| |||||||| | ||||||||||||    || |||||||||||     
T  26048739 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26048838  T
Q  244 cgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctctt 343  Q
      ||| ||  ||||||| |||||||||| |||   ||| | ||| |||||  |||| |||||||| ||||||||  | ||||||  ||||||||| ||||    
T  26048839 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatctt 26048938  T
Q  344 cttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacat 443  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || ||||| ||||| ||||  ||||| |||| ||||||    
T  26048939 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacat 26049038  T
Q  444 acgacatcaaagtgggagttat 465  Q
    ||||||||| ||||| ||||||    
T  26049039 acgacatcatagtggaagttat 26049060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 144 - 465
Target Start/End: Original strand, 26069908 - 26070229
Alignment:
Q  144 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgac 243  Q
    |||||||||||| |||||||||||||||||||| |||  |||||| ||  ||||||| |||||||| | ||||||||||||    || |||||||||||     
T  26069908 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26070007  T
Q  244 cgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctctt 343  Q
      ||| ||  ||||||| |||||||||| |||   ||| | ||| |||||  |||| |||||||| ||||||||  | ||||||  ||||||||| ||||    
T  26070008 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatctt 26070107  T
Q  344 cttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacat 443  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || ||||| ||||| ||||  ||||| |||| ||||||    
T  26070108 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacat 26070207  T
Q  444 acgacatcaaagtgggagttat 465  Q
    ||||||||| ||||| ||||||    
T  26070208 acgacatcatagtggaagttat 26070229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 144 - 465
Target Start/End: Original strand, 25538434 - 25538755
Alignment:
Q  144 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgac 243  Q
    |||||||||||| |||||||||||||||||||| |||   ||||| ||  ||||||| |||||||||  ||||||||||||    || ||||| |||||     
T  25538434 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgat 25538533  T
Q  244 cgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctctt 343  Q
      ||| ||  ||||||| |||||||||| ||||||||| | ||| |||||  |||| ||||| || ||||||||  | ||||||  ||||||||| ||||    
T  25538534 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatctt 25538633  T
Q  344 cttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacat 443  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||| || |  | || ||||| ||||||||||  ||||| |||| |||  |    
T  25538634 cttcattttgtttggacgaacttgtccagatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcagtt 25538733  T
Q  444 acgacatcaaagtgggagttat 465  Q
    ||||||||| ||||||||||||    
T  25538734 acgacatcagagtgggagttat 25538755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 106 - 424
Target Start/End: Original strand, 28180970 - 28181288
Alignment:
Q  106 tcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaagg 205  Q
    |||||||||||||| || |||||| ||||||| ||  | | |||||| ||||| || ||  ||||||||||| | |||||||||||  ||||| | |  |    
T  28180970 tcctcatcctcttccttctcctatggattcacctatgacgcgttccttagctttagaggtggtgacactcgttatggttttactggaaatctcaatagag 28181069  T
Q  206 ctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctag 305  Q
    |||||  ||||||||||||||  |||||||| |||||| | || || ||| |||| || ||||| | | |||||||   ||| |||||| ||||||||||    
T  28181070 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28181169  T
Q  306 gatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtctt 405  Q
    ||| || ||||| || || |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||  ||  || |||||     
T  28181170 gattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaaggaaagcgggcgtcta 28181269  T
Q  406 gttttgcctgttttctatg 424  Q
    ||||||||  |||||||||    
T  28181270 gttttgccaattttctatg 28181288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 106 - 424
Target Start/End: Original strand, 28185222 - 28185540
Alignment:
Q  106 tcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaagg 205  Q
    |||||||||||||| || |||||| ||||||| ||  | |||||||| ||||| || || |||||||||||| |  ||||||||||  ||||| | |  |    
T  28185222 tcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagag 28185321  T
Q  206 ctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctag 305  Q
    |||||  ||||||||||||||  |||||||| |||||| | || || ||| |||| || ||||| | | |||||||   ||| |||||| ||||||||||    
T  28185322 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28185421  T
Q  306 gatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtctt 405  Q
    ||| || ||||| || || |||||||| ||||| |||||||||||||| |||||||||||||||||||||||  |||||| ||||  ||  || |||||     
T  28185422 gattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattaactgcttcaaggaaagcgggcgtcta 28185521  T
Q  406 gttttgcctgttttctatg 424  Q
    ||||||||  |||||||||    
T  28185522 gttttgccaattttctatg 28185540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 215 - 377
Target Start/End: Original strand, 28234529 - 28234691
Alignment:
Q  215 acaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttat 314  Q
    ||||||||||||||||||||||||||||| | || || ||| |||| |||||||| | |||||||||   ||| |||||| ||||||||||||| || ||    
T  28234529 acaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 28234628  T
Q  315 tcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcat 377  Q
    |||||| || |||||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  28234629 tcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcat 28234691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 166 - 424
Target Start/End: Original strand, 28242720 - 28242978
Alignment:
Q  166 agtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatg 265  Q
    |||||||||||| | |||||||||||  |||||||||| | ||||  | | |||||||| | |||||||||||||||| | || || | | |||| ||      
T  28242720 agtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttccaggaggtgaca 28242819  T
Q  266 aaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaact 365  Q
    |||| | |||||||||   ||| |||||| ||||||||||||| || |||||||| || |||||||| ||||| |||||||||||||| |||||||||||    
T  28242820 aaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaact 28242919  T
Q  366 tgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 424  Q
    |||||||||||| ||||||| ||||| ||| || || || ||||||||  |||||||||    
T  28242920 tgtccacatcattcactgctgcaagaaaaatggacgcctagttttgccaattttctatg 28242978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 316 - 465
Target Start/End: Original strand, 26937160 - 26937309
Alignment:
Q  316 cctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctg 415  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |  |||||| ||||||||| |||| |||  ||||||||     
T  26937160 cctgtattctctatcaactatgccacttcttcattttgtttggacgaacttgtccacatcgttgactgcttcaagacaaaaggtcatctaattttgccta 26937259  T
Q  416 ttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
    |||||||||  |||||||||  |||| | ||||| |||| ||||||||||    
T  26937260 ttttctatgaagtggatccttctcacgttcgacaccaaactgggagttat 26937309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 368
Target Start/End: Complemental strand, 25507171 - 25506978
Alignment:
Q  169 gacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaa 268  Q
    |||||||||| | |||||||| |||||||||||| ||||||   |||||||||||| ||||      |||||||  |||| ||| ||||||| |||||||    
T  25507171 gacactcgtagccgttttactagccatctctacacggctctatatgacaagggaattcaca------ttgatgattgtgatctgaaaagaggagatgaaa 25507078  T
Q  269 tcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgt 368  Q
    ||| ||||||| ||| ||  |||||| |||| |||||||| |||||||| ||  ||||||||||||||||||||||   |||||||||||| ||||||||    
T  25507077 tcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttcaaaattttgtttggaggaacttgt 25506978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 424
Target Start/End: Original strand, 28149912 - 28150111
Alignment:
Q  224 tccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgtt 323  Q
    |||||||||||||||||||    || ||  || ||||||| ||||||| ||||||||||  ||| |||||| ||||||| ||||| || |||||  | ||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactct-caaggccattgaagagtccaggattttcattccaatctt 28150010  T
Q  324 ttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctat 423  Q
     |||||||||||| | ||||||||||||||||||||||||||||||||||| || ||||||| |||| |||||||| |  | ||| ||||| ||||||||    
T  28150011 ctctatcaactatacttcttcttcattttgtttggacgaacttgtccacattattcactgcttcaaggcaaagggttgcttagttctgcctattttctat 28150110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 112 - 385
Target Start/End: Original strand, 28325343 - 28325616
Alignment:
Q  112 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctctta 211  Q
    |||||||| ||||||||| ||||||| ||  | |||||||| || || || || |||||||||||| | |||||||||||  |||||||||| | ||||     
T  28325343 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 28325442  T
Q  212 ctgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctt 311  Q
     |   ||| |||| |  |||||||||||||||   ||||| ||| |||| || ||||| | ||| |||||   ||| |||||| ||||||||||||| ||    
T  28325443 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 28325542  T
Q  312 tattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgct 385  Q
     |||||| | || |||||||| ||||| |||||||| ||||| ||||| |||||||||||||| || |||||||    
T  28325543 cattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 28325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 37 - 224
Target Start/End: Complemental strand, 27428001 - 27427816
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    ||||||||||||||||||||||||| |  ||||   |||||||||||||||||||| ||||||| ||||| ||  ||||||||||||||||||  |||||    
T  27428001 tcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcattca 27427904  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaat 224  Q
     |||| | ||||||||||  |  | |||||  ||||||||  ||||||| || ||| ||||||  |||||||||| ||||||||||||    
T  27427903 gttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 27427816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 168 - 424
Target Start/End: Original strand, 28226868 - 28227124
Alignment:
Q  168 tgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaa 267  Q
    |||||||||| | |||||||||||  |||||||||  | ||||  | | |||||||| ||||| ||| |||||||  | || || ||| |||| ||||||    
T  28226868 tgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaa 28226967  T
Q  268 atcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttg 367  Q
    || | | |||||||   ||| | |||| |||| |||||||| || |||||||| || |||||||| ||||| |||||||||||||| |||||||||||||    
T  28226968 ataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttg 28227067  T
Q  368 tccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 424  Q
    |||||||||| || |||| ||||  |||  | || |||||||||||  |||||||||    
T  28227068 tccacatcattcattgcttcaaggaaaatcggcgccttgttttgccaattttctatg 28227124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 27427713 - 27427607
Alignment:
Q  330 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 429  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||| ||||||||||| || |||||| | || |||||||||||||||| ||| |||    
T  27427713 caactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggtgtg 27427614  T
Q  430 gatccta 436  Q
    || ||||    
T  27427613 gaaccta 27427607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 84 - 396
Target Start/End: Complemental strand, 26342290 - 26341975
Alignment:
Q  84 tctcatggctatgc---aatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaac 180  Q
    ||||||||||||||   ||||| | ||||| | ||||||||| || ||| ||||||| ||  | ||||||||||  || ||||||| || ||||||  |     
T  26342290 tctcatggctatgctccaatcatcgtcctctttctcttcattctcatatggattcacatatgatgtgttcctcaattttaggggcattggcactcgctat 26342191  T
Q  181 ggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcac 280  Q
    |||||||||||| || |||| |  |||||   ||||   ||| ||| |||||||||||||||  | || || ||  |||| ||  |||||| || |||||    
T  26342190 ggttttactggcaatatctatagagctctatgtgacggtggagtccgcaccttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcac 26342091  T
Q  281 tcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgca 380  Q
    | | ||| |||||| ||||||| ||||| || |||||  | || || ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||    
T  26342090 ttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttcgttttgtttggacgaacttgtccacatcattca 26341991  T
Q  381 ctgctacaagacaaag 396  Q
     |||| |||| |||||    
T  26341990 ttgcttcaaggcaaag 26341975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 217 - 390
Target Start/End: Complemental strand, 28297933 - 28297760
Alignment:
Q  217 aagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattc 316  Q
    |||||||| | |||||||||||||||| | || ||  || |||| || ||||| | |||||||||   |||   |||| ||||| ||||||| || ||||    
T  28297933 aagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattc 28297834  T
Q  317 ctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaag 390  Q
    |||| || |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  28297833 ctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaag 28297760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 217 - 390
Target Start/End: Original strand, 28514140 - 28514313
Alignment:
Q  217 aagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattc 316  Q
    |||||||| | |||||||||||||||| | || ||  || |||| || ||||| | |||||||||   |||   |||| ||||| ||||||| || ||||    
T  28514140 aagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattc 28514239  T
Q  317 ctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaag 390  Q
    |||| || |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  28514240 ctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaag 28514313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 428
Target Start/End: Original strand, 27214498 - 27214595
Alignment:
Q  331 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgt 428  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||  || |||| ||||  ||| ||||| |||||| | |||||||||||||||||    
T  27214498 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgt 27214595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 428
Target Start/End: Complemental strand, 27234730 - 27234633
Alignment:
Q  331 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgt 428  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||  || |||| ||||  ||| ||||| |||||| | |||||||||||||||||    
T  27234730 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgt 27234633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 26055746 - 26055818
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcct 109  Q
    ||||||||| |||| ||||| ||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  26055746 tcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcct 26055818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 181 - 465
Target Start/End: Original strand, 29825958 - 29826242
Alignment:
Q  181 ggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcac 280  Q
    |||||||| ||| |||||||||| ||||| |||||||||  ||| | ||||||||||||||||   || || ||||||||||| ||||||| ||| ||||    
T  29825958 ggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcac 29826057  T
Q  281 tcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgca 380  Q
    | |  || || |||||||| ||||||||    |||||| | || |||| ||| ||||| |||||||| ||||| || || |||||||| || ||  |  |    
T  29826058 ttgtgaaggcaattcaagaatctaggatagccattcctattttctctaccaattatgcttcttcttcgttttgcttagatgaacttgtgcatatagttga 29826157  T
Q  381 ctgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttat 465  Q
     ||   |||||  ||||||||||| ||||||||| |||||||||  |||||||||  |||  | |||||||| | ||||||||||    
T  29826158 gtgtgtcaagaggaagggtcgtctcgttttgcctattttctatgatgtggatccttctcatgtgcgacatcagactgggagttat 29826242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 25538360 - 25538431
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcc 108  Q
    ||||||||| |||| ||||| ||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  25538360 tcatattctccattttcaaagtcttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25538431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 26048665 - 26048736
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcc 108  Q
    ||||||||| |||| ||||| ||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  26048665 tcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26048736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 26069834 - 26069905
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcc 108  Q
    ||||||||| |||| ||||| ||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  26069834 tcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26069905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 26075716 - 26075787
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcc 108  Q
    ||||||||| |||| ||||| ||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  26075716 tcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 26142685 - 26142756
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcc 108  Q
    ||||||||| |||| ||||| ||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  26142685 tcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26142756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 25481562 - 25481633
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcc 108  Q
    ||||||||| |||| ||||| | ||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  25481562 tcatattctccattttcaaagttttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25481633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 331 - 426
Target Start/End: Original strand, 26848741 - 26848836
Alignment:
Q  331 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggc 426  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| || |||| ||||  ||||||| |  | ||| | |||||||||||||||    
T  26848741 aactatgccacttcttcgttttgtttggacgaacttgtccacatcattcattgctccaaggaaaagggtagcatggttattcctgttttctatggc 26848836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 2184369 - 2184415
Alignment:
Q  331 aactatgcctcttcttcattttgtttggacgaacttgtccacatcat 377  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  2184369 aactatgcttcttcttcattttgtttggacgaacttgtccacatcat 2184415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 426
Target Start/End: Original strand, 25071741 - 25071835
Alignment:
Q  332 actatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggc 426  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| |||| || ||||  |||| |||| |||||| | ||  |||||||||||    
T  25071741 actatgcttcttcttcattttgtttagacgaacttgtccacatcattcactacttcaaggaaaagagtcgccttgttctaccaattttctatggc 25071835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 424
Target Start/End: Original strand, 26949745 - 26949835
Alignment:
Q  334 tatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 424  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||| |||| || ||||  ||| ||||| |||||| |||| ||||||||||    
T  26949745 tatgcttcttcttcattttgtttagacgaacttgtccatatcattcactacttcaaggaaaaaggtcgccttgttctgccagttttctatg 26949835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 26975134 - 26975179
Alignment:
Q  332 actatgcctcttcttcattttgtttggacgaacttgtccacatcat 377  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  26975134 actatgcttcttcttcattttgtttggacgaacttgtccacatcat 26975179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 398
Target Start/End: Original strand, 2184980 - 2185046
Alignment:
Q  332 actatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaaggg 398  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||| |  |||| |||| |||||||    
T  2184980 actatgcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaaggg 2185046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 26018836 - 26018760
Alignment:
Q  88 atggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcagggg 164  Q
    |||||||| ||||||||||| ||  |||| || ||||||||| || |||| |||||||||||||||| |||||||||    
T  26018836 atggctattcaatcaccttcgtctacctcatccttttcctatggactcacataccaagtgttcctcaacttcagggg 26018760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 26139540 - 26139464
Alignment:
Q  88 atggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcagggg 164  Q
    |||| ||| ||||||||||||||  |||| || ||||||||| || |||| |||||||||||||||| |||||||||    
T  26139540 atggttattcaatcaccttcctctacctcatccttttcctatggactcacataccaagtgttcctcaacttcagggg 26139464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 27531570 - 27531501
Alignment:
Q  41 attctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcat 112  Q
    ||||||||||||||||||| || | |||  ||||||||||| |||||||||||| |||||||||||||||||    
T  27531570 attctgcattctcaaactccttgt-cata-agtttctctcagttctcatggctacgcaatcaccttcctcat 27531501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 27665358 - 27665311
Alignment:
Q  196 ctctacaaggctcttactgacaagggaatccacaccttcattgatgac 243  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  27665358 ctctataaggctctttctgacaaaggaatccacaccttcattgatgac 27665311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 25579537 - 25579610
Alignment:
Q  37 tcatattctgcattctcaaactcttttt--tcatccagtttctctcaattctcatggctatgcaatcaccttcc 108  Q
    ||||||||| |||| ||||| | |||||  |||||||  |||| ||||||||||||||||||||||||||||||    
T  25579537 tcatattctccattttcaaagtttttttattcatccaaattctttcaattctcatggctatgcaatcaccttcc 25579610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 377
Target Start/End: Complemental strand, 28098510 - 28098429
Alignment:
Q  296 aagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcat 377  Q
    ||||||| ||||| || ||||| || || ||||  |||||||| |||||||  ||||||||||| |||||||||||||||||    
T  28098510 aagagtccaggattttaattccggtcttctctaagaactatgcttcttctttgttttgtttggatgaacttgtccacatcat 28098429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 27665223 - 27665177
Alignment:
Q  331 aactatgcctcttcttcattttgtttggacgaacttgtccacatcat 377  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||    
T  27665223 aactatgctacttcttcattttgtttagatgaacttgtccacatcat 27665177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 251; Significance: 1e-139; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 16 - 436
Target Start/End: Complemental strand, 3844 - 3422
Alignment:
Q  16 acagaccacaaaaacttaa-actcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcc 114  Q
    |||||||||||||| |||  | ||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||||||||||    
T  3844 acagaccacaaaaatttaccattcatattctgcattctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcc 3745  T
Q  115 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactg 214  Q
    ||||||||||||||| |||||||||||||||||||||| || || ||||||| |||||||||  |||||||||| ||  |||||||||||||||||||||    
T  3744 tcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactg 3645  T
Q  215 acaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttat 314  Q
    ||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||| | || |||||||| |||||    
T  3644 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttat 3545  T
Q  315 tcctgtgttttctatcaa-ctatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcc 413  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  3544 tcctgtgttttctatcaacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcc 3445  T
Q  414 tgttttctatggcgtggatccta 436  Q
    |||||| | ||| ||||| ||||    
T  3444 tgttttatttggtgtggaaccta 3422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 37 - 436
Target Start/End: Complemental strand, 14754 - 14357
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  14754 tcatattctgcattctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttcctatggattca 14656  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcat 236  Q
    |||||||||||||| |||| || ||||||| |||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  14655 cttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcat 14556  T
Q  237 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactat 336  Q
    |||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||| | || |||||||| |||||||||||||||||||||||||||    
T  14555 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactat 14456  T
Q  337 gcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    |||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||  |||||||| ||||    
T  14455 gcct-ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaaccta 14357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 8201 - 8062
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| || ||||||    
T  8201 tcatattctgcattctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctcccatggattca 8102  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcg 176  Q
    ||||||||||||||||||| || ||||||| |||||||||    
T  8101 cttaccaagtgttcctcagttttaggggcactgacactcg 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 242; Significance: 1e-134; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 31 - 436
Target Start/End: Complemental strand, 5077 - 4672
Alignment:
Q  31 ttaaactcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatc 130  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||     
T  5077 ttaaattcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatg 4978  T
Q  131 gattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacac 230  Q
    ||||||||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||| | ||    
T  4977 gattcacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaac 4878  T
Q  231 cttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatc 330  Q
    |||||||||||||  ||| || |||||||| |||||||||| |||||| |||  ||| |||||| | || |||||||| |||||||||||||||||||||    
T  4877 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctaggatttttattcctgtgttttctatc 4778  T
Q  331 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgg 430  Q
      |||||||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||  |||||||    
T  4777 ttctatgccttttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtgg 4678  T
Q  431 atccta 436  Q
    | ||||    
T  4677 aaccta 4672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 37 - 436
Target Start/End: Complemental strand, 14032 - 13633
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||||||||||||| |  |||||    
T  14032 tcatattctgaattctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctgcattca 13933  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcat 236  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||    
T  13932 cttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcat 13833  T
Q  237 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactat 336  Q
    |||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||  |||| |||||||| ||||||||||||||||||||||||||     
T  13832 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactac 13733  T
Q  337 gcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    ||| ||||   |||||| |||||||||||||| ||||| || || |||||||||||||| ||||| || |||||||||||||||| ||| ||||||||||    
T  13732 gccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggatccta 13633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 48 - 436
Target Start/End: Original strand, 7323 - 7711
Alignment:
Q  48 attctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 147  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||  ||||||||||||||||    
T  7323 attctcaaactcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtg 7422  T
Q  148 ttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtg 247  Q
    ||||| || || ||||||| |||||||||  |||||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||||  ||    
T  7423 ttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 7522  T
Q  248 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttc 347  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||  |||| |||||||| |||||||||||||||||||||||||| ||| ||||       
T  7523 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaa 7622  T
Q  348 attttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 436  Q
    |||||| |||||||||||||| ||||| || || |||||||||||| | ||||| || |||||||||||||||| ||| ||||||||||    
T  7623 attttgcttggacgaacttgttcacattattcattgctacaagacagaaggtcgcctcgttttgcctgttttctttggtgtggatccta 7711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 169; Significance: 2e-90; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 48 - 344
Target Start/End: Complemental strand, 306 - 10
Alignment:
Q  48 attctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 147  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||  ||||||||||||||||    
T  306 attctcaaactcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtg 207  T
Q  148 ttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtg 247  Q
    ||||| || || ||||||| |||||||||  |||||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||||  ||    
T  206 ttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 107  T
Q  248 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttc 344  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||  |||| |||||||| |||||||||||||||||||||||||| ||| ||||    
T  106 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttc 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 90; Significance: 3e-43; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 215 - 424
Target Start/End: Original strand, 34690 - 34899
Alignment:
Q  215 acaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttat 314  Q
    ||||||||||||||||||||||||||||| | || || ||| |||| |||||||| | |||||||||   ||| |||||| ||||||||||||| || ||    
T  34690 acaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 34789  T
Q  315 tcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcct 414  Q
    |||||| || |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||  ||  || ||||| ||||||||     
T  34790 tcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaaggaaagcgggcgtctagttttgcca 34889  T
Q  415 gttttctatg 424  Q
     |||||||||    
T  34890 attttctatg 34899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 166 - 424
Target Start/End: Original strand, 42882 - 43140
Alignment:
Q  166 agtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatg 265  Q
    |||||||||||| | |||||||||||  |||||||||| | ||||  | | |||||||| | |||||||||||||||| | || || | | |||| ||      
T  42882 agtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttccaggaggtgaca 42981  T
Q  266 aaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaact 365  Q
    |||| | |||||||||   ||| |||||| ||||||||||||| || |||||||| || |||||||| ||||| |||||||||||||| |||||||||||    
T  42982 aaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaact 43081  T
Q  366 tgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 424  Q
    |||||||||||| ||||||| ||||| ||| || || || ||||||||  |||||||||    
T  43082 tgtccacatcattcactgctgcaagaaaaatggacgcctagttttgccaattttctatg 43140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 112 - 385
Target Start/End: Original strand, 116658 - 116931
Alignment:
Q  112 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctctta 211  Q
    |||||||| ||||||||| ||||||| ||  | |||||||| || || || || |||||||||||| | |||||||||||  |||||||||| | ||||     
T  116658 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 116757  T
Q  212 ctgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctt 311  Q
     |   ||| |||| |  |||||||||||||||   ||||| ||| |||| || ||||| | ||| |||||   ||| |||||| ||||||||||||| ||    
T  116758 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 116857  T
Q  312 tattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgct 385  Q
     |||||| | || |||||||| ||||| |||||||| ||||| ||||| |||||||||||||| || |||||||    
T  116858 cattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 116931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 168 - 424
Target Start/End: Original strand, 27366 - 27622
Alignment:
Q  168 tgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaa 267  Q
    |||||||||| | |||||||||||  |||||||||  | ||||  | | |||||||| ||||| ||| |||||||  | || || ||| |||| ||||||    
T  27366 tgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaa 27465  T
Q  268 atcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttg 367  Q
    || | | |||||||   ||| | |||| |||| |||||||| || |||||||| || |||||||| ||||| |||||||||||||| |||||||||||||    
T  27466 ataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttg 27565  T
Q  368 tccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 424  Q
    |||||||||| || |||| ||||  |||  | || |||||||||||  |||||||||    
T  27566 tccacatcattcattgcttcaaggaaaatcggcgccttgttttgccaattttctatg 27622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 112 - 385
Target Start/End: Complemental strand, 58607 - 58334
Alignment:
Q  112 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctctta 211  Q
    |||||||| || |||||| ||||||| || || |||||||| ||||| || ||  ||||||||||  | |||||||||||  |||||||||  ||||||     
T  58607 tcctcttccttctcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctcttt 58508  T
Q  212 ctgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctt 311  Q
     ||||||||||||||  |||||||| |||||| | || || ||| |||| || ||||| | |||||||||   ||| |||||| ||||||||||||| ||    
T  58507 gtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggatttt 58408  T
Q  312 tattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgct 385  Q
     ||||| || || |||||||||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  58407 cattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtccacatcattcactgct 58334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 37 - 224
Target Start/End: Original strand, 59362 - 59547
Alignment:
Q  37 tcatattctgcattctcaaactcttttttcatccagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 136  Q
    ||||||||||||||||||||||||| |  ||||   |||||||||||||||||||| ||||||| ||||| ||  ||||||||||||||||||  |||||    
T  59362 tcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcattca 59459  T
Q  137 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggccatctctacaaggctcttactgacaagggaat 224  Q
     |||| | ||||||||||  |  | |||||  ||||||||  ||||||| || ||| ||||||  |||||||||| ||||||||||||    
T  59460 gttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 59547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 330 - 436
Target Start/End: Original strand, 59650 - 59756
Alignment:
Q  330 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 429  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||| ||||||||||| || |||||| | || |||||||||||||||| ||| |||    
T  59650 caactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggtgtg 59749  T
Q  430 gatccta 436  Q
    || ||||    
T  59750 gaaccta 59756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 228 - 377
Target Start/End: Original strand, 3279666 - 3279815
Alignment:
Q  228 caccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttct 327  Q
    |||||||||||||||  | || || ||  |||| |||||||||| || |||||| | ||| |||||  ||||||| | ||| |||||||| || || |||    
T  3279666 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 3279765  T
Q  328 atcaactatgcctcttcttcattttgtttggacgaacttgtccacatcat 377  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  3279766 atcaactatgcttcttctatattttgtttggacgaacttgtccacatcat 3279815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 17993789 - 17993744
Alignment:
Q  332 actatgcctcttcttcattttgtttggacgaacttgtccacatcat 377  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  17993789 actatgcttcttcttcattttgtttagacgaacttgtccacatcat 17993744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 5916 - 5992
Alignment:
Q  88 atggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcagggg 164  Q
    |||| ||| ||||||||||||||  |||| || ||||||||| || |||| |||||||||||||||| |||||||||    
T  5916 atggttattcaatcaccttcctctacctcatccttttcctatggactcacataccaagtgttcctcaacttcagggg 5992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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