View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13425_high_21 (Length: 362)
Name: NF13425_high_21
Description: NF13425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13425_high_21 |
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Alignment Details
Target: chr5 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 38713526 - 38713868
Alignment:
| Q |
1 |
tataaacatttttctttgataatgccataattgagattttcgagtgttatccagataatcaagatatataacatgcatggtaaagattggagacttgaca |
100 |
Q |
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| T |
38713526 |
tataaacatttttctttgataatgccataattgagattttcgagtgttatccagataatcaagatatataacatgcatggtaaagattggagacttgaca |
38713625 |
T |
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| Q |
101 |
aaaactatgcatgatgatttatggtgtttataacatgatatatacttttccttnnnnnnnnntgatatatagtttttaaagttataactttttgtattat |
200 |
Q |
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| T |
38713626 |
aaaaatatgcatgatgatttatggtgtttataacatgatatatacttttccttaaaaaaaaatgatatatagtttttaaagttataactttttgtattat |
38713725 |
T |
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| Q |
201 |
atgtagctaaaataaattgaattgcagtggccgatattgaggtcgtgccaaattgcaagaccacataggattcatgtcaaaaataaaaatgaatcttttg |
300 |
Q |
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| T |
38713726 |
atgtagctagaataaatcgaattgcagtggccgatattgaggttgtgccaaattgcaagactacataggattcatgtcaaaaataaaaattaatcttttg |
38713825 |
T |
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| Q |
301 |
taatcttacaactcaactcgataacgtttaataatatcatttt |
343 |
Q |
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| T |
38713826 |
tagtcttacaactcaactcgataacatttaataatgtcatttt |
38713868 |
T |
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