View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13425_high_38 (Length: 239)
Name: NF13425_high_38
Description: NF13425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13425_high_38 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 42170377 - 42170597
Alignment:
| Q |
1 |
agatttatgaatttacccatatatgtttgatacgataccaaattattatacactaaaaatatcttcttattgtagaaataatagattttaggtgaaattt |
100 |
Q |
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| T |
42170377 |
agatttatgaatttacccatatatgtttgatacgataccaaattattatacactaaaaatatcttcttattgtagaaataatagattttaggtgaaattt |
42170476 |
T |
|
| Q |
101 |
caacattttgaataataatgcacaaactatagtgatgcactcggacaacacagttgattttcacttacacttaatttattagctatgtagaataatatat |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
42170477 |
caacattttgaataataatgcacaaactatagagatgcactcggacaacacagttgattttcgcttacacttaatttattagctatgtagaataatatat |
42170576 |
T |
|
| Q |
201 |
tatttttgggatctttaagca |
221 |
Q |
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||||||||||||||||||||| |
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| T |
42170577 |
tatttttgggatctttaagca |
42170597 |
T |
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