View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13425_high_42 (Length: 227)
Name: NF13425_high_42
Description: NF13425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13425_high_42 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 25316623 - 25316403
Alignment:
| Q |
6 |
ataagattggttgtaggtagataagctttgaatcttttgttgagttgattttacttgtatttgcatatgcatttgttttcatatttacttattcatatgt |
105 |
Q |
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| T |
25316623 |
ataagattggttgtaggtagataa-ctttgaatcttttcttgagttgattttacttgtatttgcatatgcatttgttttcatatttacttattcatatgt |
25316525 |
T |
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| Q |
106 |
ttgcatttaaatatgctgttaagggaaacaatgctactaacttctttcattttcctattaaggaaagtcttcttctgaagtagattatgttgaatgcctt |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
25316524 |
ttgcatttaaatatgctgttaagggaaacaatgctactaccttctttcattttcctattaaggaaagtcttcttctgaagtagattatgttgaatgcatt |
25316425 |
T |
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| Q |
206 |
tggcttagcagaaagaagttaa |
227 |
Q |
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||| |||||| ||||||||||| |
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| T |
25316424 |
tggtttagcataaagaagttaa |
25316403 |
T |
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