View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13425_low_11 (Length: 533)

Name: NF13425_low_11
Description: NF13425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13425_low_11
NF13425_low_11
[»] chr4 (66 HSPs)
chr4 (1-275)||(403706-403982)
chr4 (267-481)||(403430-403634)
chr4 (246-387)||(54426050-54426191)
chr4 (256-387)||(21731588-21731719)
chr4 (246-392)||(24169265-24169411)
chr4 (246-386)||(29388622-29388762)
chr4 (246-367)||(13126498-13126619)
chr4 (246-385)||(26787-26925)
chr4 (266-381)||(2244064-2244179)
chr4 (253-514)||(43505829-43506076)
chr4 (246-474)||(15173225-15173459)
chr4 (254-387)||(17822795-17822928)
chr4 (279-387)||(50681044-50681152)
chr4 (251-370)||(25904150-25904269)
chr4 (246-487)||(41336659-41336908)
chr4 (251-376)||(29657402-29657527)
chr4 (278-387)||(39603124-39603233)
chr4 (251-367)||(22030230-22030346)
chr4 (293-385)||(46588042-46588134)
chr4 (310-392)||(7839347-7839429)
chr4 (246-324)||(27043752-27043830)
chr4 (246-322)||(49940089-49940165)
chr4 (310-370)||(55414406-55414466)
chr4 (257-392)||(44862917-44863052)
chr4 (276-462)||(54069369-54069564)
chr4 (258-387)||(40830964-40831092)
chr4 (246-367)||(35571553-35571674)
chr4 (251-387)||(39691076-39691206)
chr4 (312-385)||(46592197-46592270)
chr4 (302-387)||(50662716-50662801)
chr4 (277-385)||(56249533-56249640)
chr4 (259-362)||(1706654-1706757)
chr4 (157-235)||(405470-405548)
chr4 (292-370)||(55064859-55064937)
chr4 (395-472)||(15177282-15177359)
chr4 (246-361)||(1407989-1408105)
chr4 (251-371)||(39011055-39011175)
chr4 (246-370)||(52315119-52315243)
chr4 (246-326)||(55437144-55437224)
chr4 (257-364)||(23459658-23459764)
chr4 (255-354)||(49939882-49939981)
chr4 (251-361)||(49003802-49003912)
chr4 (255-317)||(49003973-49004035)
chr4 (246-307)||(18815110-18815171)
chr4 (251-387)||(40174570-40174700)
chr4 (246-339)||(42403945-42404037)
chr4 (246-387)||(53294036-53294177)
chr4 (317-370)||(55302273-55302326)
chr4 (255-371)||(1374507-1374623)
chr4 (276-368)||(21523584-21523675)
chr4 (331-387)||(33586962-33587018)
chr4 (456-515)||(18814962-18815020)
chr4 (255-358)||(27330007-27330110)
chr4 (252-327)||(34430626-34430701)
chr4 (444-515)||(35571747-35571817)
chr4 (460-514)||(11389407-11389461)
chr4 (350-387)||(9760447-9760484)
chr4 (302-367)||(20109612-20109677)
chr4 (264-345)||(25903854-25903934)
chr4 (302-387)||(30668345-30668429)
chr4 (459-515)||(27027-27083)
chr4 (402-499)||(1242362-1242455)
chr4 (246-282)||(22662173-22662209)
chr4 (246-282)||(22666652-22666688)
chr4 (254-370)||(29912972-29913087)
chr4 (246-274)||(53034721-53034749)
[»] chr5 (70 HSPs)
chr5 (246-387)||(16937805-16937946)
chr5 (255-370)||(10639977-10640092)
chr5 (246-387)||(25461570-25461710)
chr5 (256-384)||(12857637-12857765)
chr5 (256-451)||(42500175-42500361)
chr5 (256-384)||(12857270-12857398)
chr5 (256-376)||(29925859-29925978)
chr5 (246-369)||(3932598-3932721)
chr5 (246-376)||(7705920-7706050)
chr5 (246-371)||(9107113-9107238)
chr5 (246-327)||(11064733-11064814)
chr5 (310-387)||(37954693-37954770)
chr5 (255-367)||(42100338-42100450)
chr5 (280-387)||(16457935-16458042)
chr5 (246-392)||(32009694-32009841)
chr5 (251-370)||(40426789-40426908)
chr5 (246-370)||(40438876-40438999)
chr5 (292-367)||(3735126-3735201)
chr5 (250-367)||(15015874-15015987)
chr5 (255-369)||(11700188-11700301)
chr5 (447-511)||(19460508-19460572)
chr5 (251-366)||(9202675-9202790)
chr5 (292-371)||(25461114-25461193)
chr5 (302-369)||(35446080-35446147)
chr5 (246-392)||(7674650-7674795)
chr5 (302-364)||(8334601-8334663)
chr5 (250-308)||(12425659-12425717)
chr5 (409-515)||(32941341-32941446)
chr5 (403-464)||(7999127-7999188)
chr5 (246-315)||(32010024-32010093)
chr5 (246-327)||(34736449-34736530)
chr5 (246-327)||(41419386-41419467)
chr5 (444-512)||(1465138-1465206)
chr5 (255-343)||(3520628-3520716)
chr5 (403-515)||(3735579-3735691)
chr5 (256-356)||(15246871-15246971)
chr5 (255-323)||(35445775-35445843)
chr5 (246-326)||(41534506-41534586)
chr5 (438-513)||(7319134-7319209)
chr5 (460-515)||(9202883-9202938)
chr5 (254-337)||(34102243-34102326)
chr5 (252-318)||(37968952-37969019)
chr5 (444-499)||(39105360-39105415)
chr5 (246-365)||(39594836-39594955)
chr5 (330-384)||(13697765-13697819)
chr5 (460-514)||(24030547-24030601)
chr5 (246-371)||(32941494-32941618)
chr5 (251-384)||(1464947-1465080)
chr5 (462-515)||(7706126-7706179)
chr5 (254-359)||(7808540-7808645)
chr5 (402-451)||(15015785-15015834)
chr5 (408-473)||(16458071-16458136)
chr5 (260-341)||(31038337-31038418)
chr5 (260-341)||(31047561-31047642)
chr5 (310-387)||(39105471-39105548)
chr5 (246-307)||(42568952-42569013)
chr5 (246-387)||(43300885-43301026)
chr5 (246-337)||(2973465-2973557)
chr5 (331-387)||(4014431-4014487)
chr5 (249-289)||(4625834-4625874)
chr5 (246-294)||(10502395-10502443)
chr5 (313-385)||(14788825-14788896)
chr5 (258-290)||(15557171-15557203)
chr5 (246-286)||(22209746-22209786)
chr5 (276-368)||(32859672-32859763)
chr5 (276-368)||(32861844-32861935)
chr5 (246-338)||(32942650-32942742)
chr5 (438-514)||(40439078-40439153)
chr5 (255-327)||(41535448-41535520)
chr5 (246-294)||(42646770-42646818)
[»] chr3 (64 HSPs)
chr3 (246-387)||(39980736-39980877)
chr3 (246-515)||(20880347-20880624)
chr3 (258-387)||(30443900-30444029)
chr3 (255-371)||(13715503-13715619)
chr3 (251-366)||(9832682-9832797)
chr3 (255-361)||(31365119-31365225)
chr3 (246-387)||(21367674-21367815)
chr3 (397-514)||(30956708-30956825)
chr3 (397-514)||(30972520-30972637)
chr3 (255-359)||(26878235-26878339)
chr3 (259-370)||(3845498-3845608)
chr3 (267-369)||(53789406-53789506)
chr3 (246-387)||(402464-402605)
chr3 (438-515)||(31365395-31365472)
chr3 (253-370)||(34610735-34610852)
chr3 (256-387)||(18405763-18405894)
chr3 (319-387)||(47132338-47132406)
chr3 (304-387)||(901931-902014)
chr3 (326-392)||(35696240-35696306)
chr3 (317-371)||(46478712-46478766)
chr3 (310-387)||(49556865-49556942)
chr3 (255-371)||(31365240-31365356)
chr3 (255-363)||(37689261-37689368)
chr3 (438-513)||(1508704-1508779)
chr3 (296-371)||(4401067-4401142)
chr3 (395-473)||(29520559-29520636)
chr3 (246-364)||(51929279-51929397)
chr3 (246-366)||(584074-584194)
chr3 (280-368)||(19983801-19983888)
chr3 (251-327)||(34235020-34235096)
chr3 (303-387)||(36631030-36631114)
chr3 (410-497)||(12862342-12862429)
chr3 (444-515)||(31403238-31403309)
chr3 (395-473)||(5331206-5331283)
chr3 (257-387)||(22203437-22203566)
chr3 (304-365)||(944591-944652)
chr3 (255-296)||(5448542-5448583)
chr3 (246-387)||(24085260-24085401)
chr3 (246-299)||(25447167-25447220)
chr3 (458-515)||(46886830-46886887)
chr3 (258-366)||(38902094-38902201)
chr3 (246-309)||(20170636-20170699)
chr3 (255-370)||(46031014-46031129)
chr3 (255-370)||(46778122-46778236)
chr3 (246-288)||(16072963-16073005)
chr3 (397-499)||(20170409-20170511)
chr3 (310-360)||(26911619-26911669)
chr3 (246-387)||(32582751-32582885)
chr3 (458-512)||(39442321-39442375)
chr3 (246-288)||(46478773-46478815)
chr3 (254-315)||(50211813-50211875)
chr3 (330-367)||(20170550-20170587)
chr3 (446-507)||(23815941-23816002)
chr3 (246-287)||(33405114-33405155)
chr3 (246-299)||(37795690-37795743)
chr3 (246-315)||(42747704-42747773)
chr3 (256-356)||(53762326-53762426)
chr3 (418-515)||(53789564-53789661)
chr3 (330-370)||(7301363-7301403)
chr3 (402-499)||(7814226-7814319)
chr3 (246-286)||(26911699-26911739)
chr3 (251-283)||(31403470-31403502)
chr3 (318-370)||(35574862-35574913)
chr3 (402-514)||(35959543-35959655)
[»] chr2 (61 HSPs)
chr2 (246-371)||(15305697-15305822)
chr2 (254-487)||(26201926-26202168)
chr2 (263-515)||(43279466-43279729)
chr2 (243-370)||(31561661-31561788)
chr2 (246-387)||(20952362-20952503)
chr2 (260-515)||(39659445-39659708)
chr2 (302-387)||(32592593-32592678)
chr2 (246-385)||(7928220-7928360)
chr2 (256-387)||(1625907-1626038)
chr2 (276-371)||(12289820-12289915)
chr2 (263-387)||(18066135-18066259)
chr2 (246-341)||(30331804-30331899)
chr2 (254-364)||(449877-449987)
chr2 (246-370)||(33319738-33319858)
chr2 (397-515)||(41407171-41407289)
chr2 (251-367)||(2416340-2416456)
chr2 (246-370)||(4606949-4607073)
chr2 (276-371)||(12194975-12195071)
chr2 (246-370)||(12464395-12464519)
chr2 (460-515)||(1633691-1633746)
chr2 (256-367)||(15757590-15757701)
chr2 (246-367)||(40682314-40682438)
chr2 (456-513)||(12795664-12795721)
chr2 (280-381)||(20926516-20926616)
chr2 (246-355)||(41812014-41812123)
chr2 (258-367)||(45229538-45229647)
chr2 (253-392)||(24100929-24101069)
chr2 (255-370)||(33981146-33981262)
chr2 (253-327)||(7043659-7043733)
chr2 (453-511)||(10619343-10619401)
chr2 (310-371)||(11201367-11201429)
chr2 (246-288)||(18179055-18179097)
chr2 (246-324)||(27317449-27317527)
chr2 (253-370)||(7035496-7035613)
chr2 (246-327)||(31744365-31744446)
chr2 (310-383)||(36125372-36125445)
chr2 (246-327)||(42659133-42659214)
chr2 (255-367)||(13325597-13325709)
chr2 (253-307)||(1875156-1875210)
chr2 (246-368)||(2142680-2142802)
chr2 (253-327)||(7033231-7033305)
chr2 (319-385)||(39073684-39073750)
chr2 (246-383)||(10619142-10619279)
chr2 (246-327)||(42419860-42419941)
chr2 (459-515)||(15757810-15757866)
chr2 (328-384)||(23956036-23956092)
chr2 (343-387)||(40279414-40279458)
chr2 (255-370)||(750694-750809)
chr2 (310-381)||(5745771-5745842)
chr2 (460-515)||(36534668-36534723)
chr2 (259-370)||(41851559-41851670)
chr2 (445-499)||(5599180-5599234)
chr2 (254-315)||(1633430-1633491)
chr2 (343-376)||(9877958-9877991)
chr2 (251-327)||(40776024-40776101)
chr2 (254-362)||(9174847-9174955)
chr2 (255-299)||(14220763-14220807)
chr2 (255-315)||(21828041-21828101)
chr2 (246-282)||(30990361-30990397)
chr2 (397-473)||(32592499-32592575)
chr2 (254-282)||(43141984-43142012)
[»] chr8 (46 HSPs)
chr8 (252-371)||(35534541-35534660)
chr8 (251-364)||(10758184-10758297)
chr8 (239-387)||(12976220-12976367)
chr8 (255-371)||(35643919-35644035)
chr8 (256-385)||(26771274-26771403)
chr8 (255-370)||(1058008-1058122)
chr8 (255-384)||(18133666-18133795)
chr8 (246-371)||(43045647-43045772)
chr8 (264-387)||(28763375-28763498)
chr8 (302-365)||(16825516-16825578)
chr8 (397-514)||(14956377-14956494)
chr8 (246-363)||(30251376-30251493)
chr8 (254-366)||(35749500-35749612)
chr8 (292-371)||(10120779-10120858)
chr8 (397-515)||(1058156-1058274)
chr8 (246-356)||(36963276-36963386)
chr8 (254-387)||(27028838-27028971)
chr8 (251-360)||(32840913-32841022)
chr8 (302-387)||(37945603-37945688)
chr8 (255-387)||(6525824-6525956)
chr8 (255-387)||(38648358-38648490)
chr8 (246-338)||(40859705-40859796)
chr8 (255-370)||(31716158-31716273)
chr8 (246-288)||(38602433-38602475)
chr8 (458-515)||(40981000-40981057)
chr8 (256-353)||(41589627-41589724)
chr8 (441-500)||(41821444-41821501)
chr8 (460-514)||(2833465-2833520)
chr8 (255-346)||(27694930-27695021)
chr8 (405-472)||(32975973-32976040)
chr8 (265-387)||(1930042-1930164)
chr8 (402-511)||(9130394-9130506)
chr8 (246-308)||(12496994-12497056)
chr8 (461-515)||(29819026-29819080)
chr8 (350-388)||(30657798-30657836)
chr8 (246-327)||(34770934-34771016)
chr8 (404-478)||(38353257-38353330)
chr8 (445-499)||(40637423-40637477)
chr8 (255-327)||(11376769-11376842)
chr8 (257-298)||(29818877-29818918)
chr8 (246-315)||(43717856-43717925)
chr8 (246-282)||(18331826-18331862)
chr8 (343-387)||(23775131-23775175)
chr8 (258-370)||(29205832-29205943)
chr8 (411-475)||(42043441-42043505)
chr8 (246-282)||(43368622-43368658)
[»] chr7 (54 HSPs)
chr7 (251-366)||(19302490-19302605)
chr7 (246-387)||(11619080-11619221)
chr7 (418-515)||(21568731-21568828)
chr7 (258-387)||(34744035-34744164)
chr7 (255-366)||(3927941-3928052)
chr7 (263-387)||(19022524-19022648)
chr7 (283-387)||(21568454-21568558)
chr7 (302-385)||(30570909-30570992)
chr7 (277-387)||(19214359-19214469)
chr7 (256-384)||(33601342-33601470)
chr7 (256-387)||(21196276-21196406)
chr7 (261-364)||(35056706-35056808)
chr7 (310-364)||(27566680-27566734)
chr7 (309-387)||(39629942-39630020)
chr7 (251-392)||(34035919-34036060)
chr7 (255-367)||(27863656-27863768)
chr7 (302-370)||(38499891-38499959)
chr7 (320-387)||(38138475-38138542)
chr7 (252-370)||(17944271-17944389)
chr7 (397-495)||(45806559-45806657)
chr7 (259-376)||(420378-420495)
chr7 (246-371)||(33128776-33128899)
chr7 (302-387)||(45790404-45790488)
chr7 (255-364)||(48470074-48470183)
chr7 (292-367)||(3308219-3308295)
chr7 (459-515)||(38500062-38500118)
chr7 (395-451)||(45806406-45806462)
chr7 (246-385)||(49019877-49020017)
chr7 (409-512)||(4970882-4970985)
chr7 (246-370)||(3836605-3836728)
chr7 (274-371)||(23989471-23989572)
chr7 (246-355)||(5947280-5947389)
chr7 (246-387)||(20526453-20526594)
chr7 (246-299)||(33266408-33266461)
chr7 (246-367)||(39967947-39968068)
chr7 (246-334)||(4970714-4970802)
chr7 (296-368)||(5947210-5947282)
chr7 (260-384)||(33601963-33602087)
chr7 (256-370)||(36517603-36517715)
chr7 (336-387)||(46280284-46280335)
chr7 (447-514)||(47795838-47795905)
chr7 (461-515)||(27863843-27863897)
chr7 (460-514)||(33678663-33678717)
chr7 (397-471)||(46078061-46078135)
chr7 (246-283)||(8427124-8427161)
chr7 (246-299)||(9210916-9210969)
chr7 (266-315)||(20882354-20882403)
chr7 (402-515)||(33128627-33128740)
chr7 (246-371)||(40377774-40377899)
chr7 (251-328)||(43694495-43694572)
chr7 (319-376)||(45338466-45338523)
chr7 (438-515)||(46280382-46280459)
chr7 (250-282)||(529688-529720)
chr7 (256-308)||(18765370-18765422)
[»] chr1 (73 HSPs)
chr1 (255-385)||(2295105-2295235)
chr1 (251-387)||(49938754-49938890)
chr1 (255-366)||(29904779-29904890)
chr1 (246-387)||(3233937-3234078)
chr1 (255-371)||(473187-473302)
chr1 (268-371)||(41184594-41184697)
chr1 (252-387)||(6556978-6557114)
chr1 (310-387)||(51929525-51929602)
chr1 (246-385)||(5741615-5741754)
chr1 (403-515)||(37473269-37473381)
chr1 (259-363)||(37517101-37517205)
chr1 (246-366)||(37617387-37617506)
chr1 (246-385)||(14576576-14576714)
chr1 (252-327)||(39976138-39976213)
chr1 (246-332)||(50644177-50644263)
chr1 (255-515)||(1510241-1510509)
chr1 (302-387)||(17603362-17603447)
chr1 (246-387)||(37631481-37631622)
chr1 (246-385)||(5720934-5721073)
chr1 (292-387)||(5709634-5709728)
chr1 (276-359)||(27976639-27976721)
chr1 (246-368)||(3887554-3887676)
chr1 (253-299)||(15784412-15784458)
chr1 (423-513)||(33541816-33541906)
chr1 (257-370)||(41195129-41195239)
chr1 (317-387)||(42174862-42174932)
chr1 (257-370)||(7069440-7069553)
chr1 (256-368)||(7941632-7941744)
chr1 (302-370)||(37473427-37473495)
chr1 (246-358)||(42575391-42575503)
chr1 (444-515)||(5894282-5894353)
chr1 (246-387)||(36872739-36872876)
chr1 (246-367)||(10199330-10199451)
chr1 (459-517)||(47498977-47499035)
chr1 (251-360)||(11941296-11941405)
chr1 (302-367)||(15477592-15477657)
chr1 (334-387)||(43230780-43230833)
chr1 (295-387)||(1509758-1509850)
chr1 (295-387)||(7136970-7137061)
chr1 (255-327)||(10233579-10233651)
chr1 (255-387)||(13810005-13810137)
chr1 (310-370)||(24915037-24915097)
chr1 (459-514)||(6556889-6556944)
chr1 (253-308)||(33204323-33204378)
chr1 (255-326)||(38001663-38001734)
chr1 (246-327)||(1432582-1432663)
chr1 (251-327)||(489257-489333)
chr1 (246-370)||(2777916-2778039)
chr1 (343-387)||(14443456-14443500)
chr1 (444-515)||(14331659-14331730)
chr1 (464-515)||(24562452-24562503)
chr1 (460-515)||(27820475-27820530)
chr1 (304-387)||(30286499-30286582)
chr1 (320-387)||(36872595-36872662)
chr1 (258-368)||(596201-596311)
chr1 (397-487)||(3234105-3234195)
chr1 (246-370)||(6292517-6292640)
chr1 (246-288)||(7069385-7069427)
chr1 (403-473)||(17830066-17830136)
chr1 (403-513)||(30191863-30191973)
chr1 (460-514)||(51688576-51688630)
chr1 (343-376)||(10799480-10799513)
chr1 (277-370)||(27970247-27970340)
chr1 (254-327)||(36514606-36514679)
chr1 (251-288)||(38116004-38116041)
chr1 (317-365)||(17830179-17830227)
chr1 (343-387)||(24225253-24225297)
chr1 (246-366)||(27146177-27146297)
chr1 (331-387)||(27820344-27820400)
chr1 (402-499)||(31774128-31774221)
chr1 (255-387)||(37842287-37842418)
chr1 (256-324)||(38247397-38247465)
chr1 (255-327)||(51190905-51190977)
[»] chr6 (33 HSPs)
chr6 (397-498)||(18076083-18076184)
chr6 (256-370)||(2455015-2455126)
chr6 (270-370)||(20368127-20368226)
chr6 (246-361)||(848022-848136)
chr6 (418-515)||(6538387-6538484)
chr6 (246-366)||(34430743-34430862)
chr6 (256-370)||(2455283-2455397)
chr6 (330-387)||(6536622-6536679)
chr6 (310-387)||(9763567-9763644)
chr6 (302-387)||(31624097-31624181)
chr6 (246-370)||(24982729-24982853)
chr6 (344-387)||(6538519-6538562)
chr6 (263-376)||(30536528-30536634)
chr6 (255-297)||(35069543-35069585)
chr6 (310-387)||(34430447-34430524)
chr6 (438-514)||(34430587-34430663)
chr6 (246-366)||(34882343-34882463)
chr6 (460-515)||(264251-264306)
chr6 (264-371)||(9912131-9912238)
chr6 (246-349)||(21405076-21405179)
chr6 (246-381)||(30926533-30926667)
chr6 (246-288)||(835183-835225)
chr6 (266-364)||(19411491-19411589)
chr6 (397-451)||(30536640-30536694)
chr6 (264-370)||(31813185-31813291)
chr6 (246-327)||(33089572-33089654)
chr6 (330-387)||(6016381-6016438)
chr6 (258-315)||(10645319-10645376)
chr6 (317-366)||(18076231-18076280)
chr6 (258-366)||(23063468-23063577)
chr6 (292-364)||(2735099-2735171)
chr6 (246-282)||(12111079-12111115)
chr6 (302-370)||(35070628-35070696)
[»] scaffold0012 (2 HSPs)
scaffold0012 (404-478)||(207670-207744)
scaffold0012 (329-374)||(207582-207627)
[»] scaffold0050 (1 HSPs)
scaffold0050 (320-387)||(58749-58816)
[»] scaffold0221 (1 HSPs)
scaffold0221 (317-370)||(22255-22308)
[»] scaffold0147 (1 HSPs)
scaffold0147 (343-386)||(23639-23682)
[»] scaffold0103 (1 HSPs)
scaffold0103 (319-366)||(52005-52052)
[»] scaffold0528 (1 HSPs)
scaffold0528 (260-341)||(918-999)
[»] scaffold0024 (1 HSPs)
scaffold0024 (350-431)||(21311-21394)


Alignment Details
Target: chr4 (Bit Score: 166; Significance: 1e-88; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 403982 - 403706
Alignment:
Q  1 gcaaggctgccgtaagttcaaccctaatctcttaatcaatacatttgaacagagaatgactttctgccccagaactcaccatagtttgaacaaaaacagt 100  Q
    |||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  403982 gcaaggctaccataagttccaccctaatctcttaatcaatacatttgaacagagaatgactttctgccccagaacccaccatagtttgaataaaaacagt 403883  T
Q  101 taaataagaaattc--atatcattacaatacaagcaggtggaattaaatattaaggggcaaaaatagagagcatgaaggtaagaaactaggaaatgaata 198  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| | | || | ||||||| ||  ||||||||| || ||||||||    
T  403882 taaataagacattcatatatcattacaatacaagcaggtggaattaaatattaagggactagaagaaagagcatcaaattaagaaacttgggaatgaata 403783  T
Q  199 ttttgatcattagcaacttggcattatcatttatcaacttggcatacttggtttgacttatttgagcttatctacta 275  Q
     ||||||||||| |||||||||||||| ||| ||| |||||||||||||||  ||||||| || |||||||||||||    
T  403782 ctttgatcattaacaacttggcattattattcatccacttggcatacttggaatgacttacttaagcttatctacta 403706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 267 - 481
Target Start/End: Complemental strand, 403634 - 403430
Alignment:
Q  267 tatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagc--ttatttcaacttattttcataagtt 364  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||  ||||||||||||||  || ||||||||||||||||||||||    
T  403634 tatctactaacataagttttgtgaaactgtttggtacaacttttgaaaatagcttattgcaaatttcataagcttttttttcaacttattttcataagtt 403535  T
Q  365 ctccaatgtagcctataaaaacattttactagaacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttat 464  Q
     |||||||| | |||||||             |||| ||||||||||||||| ||||||||||||||||||| || |||||||||||||| || | ||||    
T  403534 ttccaatgtcggctataaa-------------aacaatttaacgttattttatcttttgctataaaagtaacttacgcaagcttatagataagcgtttat 403448  T
Q  465 catg-ataagcacttctg 481  Q
    |||| |||||||||||||    
T  403447 catgaataagcacttctg 403430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 246 - 387
Target Start/End: Complemental strand, 54426191 - 54426050
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||||||||||||||||  |||||||||||| | |||| |||  |||||||  ||||| |||||||||||| |||||||||||| |||    
T  54426191 ttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagctttttt 54426092  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||| |||||||||||||||||||||| |||  ||||||||||    
T  54426091 caagttattttcataagttctccaatatagattataaaaaca 54426050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 256 - 387
Target Start/End: Original strand, 21731588 - 21731719
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    |||||||||| |||||||| ||||||||||||| | | ||||||  ||||||| |||||| ||||||| |||| |||||||| ||| |||||||||| ||    
T  21731588 ttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataaacttttttcaacttactt 21731687  T
Q  356 tcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| ||||||||| |||| ||||||||||    
T  21731688 tcataaattctccaatatagcttataaaaaca 21731719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 246 - 392
Target Start/End: Complemental strand, 24169411 - 24169265
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||| ||| |||||||||  |||||||||||| | ||| ||||| ||||||||| ||||||||||||||||  ||||||||| || |||    
T  24169411 ttggattggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcataagatttttt 24169312  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaacatttta 392  Q
    ||||||||||||||||| |||||||  |||| | | |||||||||||    
T  24169311 caacttattttcataagctctccaagatagcttgtgaaaacatttta 24169265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 246 - 386
Target Start/End: Complemental strand, 29388762 - 29388622
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| | ||||||  |||||||  ||||  || ||||||||| ||| ||| |||  |||    
T  29388762 ttgggttgacttatttgaccttatctactaacataagttttgtaagattgtttgggagaacttacgaaagcagtttatgacaatttttatatgctctttt 29388663  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaac 386  Q
    |||||||||||||||| ||||||| | |||| |||||||||    
T  29388662 caacttattttcataaattctccagtatagcttataaaaac 29388622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 246 - 367
Target Start/End: Original strand, 13126498 - 13126619
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||| |||||| ||||||||||||||||||| | ||||||||  ||||||| | |||| |||||||||||  | |||||||||| |||    
T  13126498 ttggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagctttttt 13126597  T
Q  346 caacttattttcataagttctc 367  Q
    || |||||||||||||||||||    
T  13126598 cagcttattttcataagttctc 13126619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 246 - 385
Target Start/End: Original strand, 26787 - 26925
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||||||||||| |||  |||||| ||||| | |||||||   |||| || |||||| |||||||||||||||||| |||||| |||    
T  26787 ttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttatgacaaatttcacaagctt-ttt 26885  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaa 385  Q
    ||  |||||||||||||||||||||| |||| ||||||||    
T  26886 cagattattttcataagttctccaatatagcttataaaaa 26925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 266 - 381
Target Start/End: Complemental strand, 2244179 - 2244064
Alignment:
Q  266 ttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttc 365  Q
    ||||||||| ||||||||||| | ||||||||||  |||| |||| |||| ||||||||||||  ||||||| ||| ||||| |||||||||||||||||    
T  2244179 ttatctactgacataagttttttgaaactgtttgggagaatttttaaaaacagcttatgacaatattcataaacttttttcaccttattttcataagttc 2244080  T
Q  366 tccaatgtagcctata 381  Q
    |||||| |||| ||||    
T  2244079 tccaatatagcttata 2244064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 253 - 514
Target Start/End: Complemental strand, 43506076 - 43505829
Alignment:
Q  253 gacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt-caactt 351  Q
    |||||||||||| ||||| ||  ||| ||||||||| | |||||| |  || |||  |||||||||||||||| |  |||||||||||| ||| ||||||    
T  43506076 gacttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatagcttatgagagttttcataagctttttttcaactt 43505977  T
Q  352 attttcataagttctccaatgtagcctataaaaacattttactagaacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttata 451  Q
    ||||||||| | |||||||| |||| |||||||||| ||||             ||||||||||| |||||||||||||| || | ||||||||||||||    
T  43505976 attttcatatgatctccaatctagcttataaaaacaattta-------------acgttattttatcttttgctataaaaatagcttatgcaagcttata 43505890  T
Q  452 gatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaaca 514  Q
     || |||||||||||||||  ||  || ||| ||||  ||||||||||  |||||||||||||    
T  43505889 cataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaaca 43505829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 474
Target Start/End: Original strand, 15173225 - 15173459
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||||||||||||| |||||||||| ||||||||||||| | ||||||||  |||  || ||||||||||||||||||| ||||||||| || |||    
T  15173225 ttggattgacttatttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgacaattttcataagttttttt 15173324  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaa-cattt--------tactagaacagtttaacgttattttaccttttgctataaaagtaac 436  Q
    ||| | |||||||| ||   |||| | |||| |||||||| || ||        ||  |||||| |||| |||||||||| |||| ||||| |||||| |    
T  15173325 caaatgattttcattag---tccagtatagcttataaaaaccacttatagcacatagaagaacaatttatcgttattttatctttagctattaaagtagc 15173421  T
Q  437 atatgcaagcttatagatgagtgcttatcatgataagc 474  Q
     |||||||||||||| ||  | ||||||||||||||||    
T  15173422 ttatgcaagcttatacatatgcgcttatcatgataagc 15173459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 254 - 387
Target Start/End: Original strand, 17822795 - 17822928
Alignment:
Q  254 acttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttat 353  Q
    ||||||||||||||||||||| ||||||||| ||| | ||| |||   ||||| | |||||| |||||||||||  |||||||||||| ||| | |||||    
T  17822795 acttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataagctttttttagcttat 17822894  T
Q  354 tttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||||||||||||||  |||| ||| ||||||    
T  17822895 tttcataagttctccaagatagcttatgaaaaca 17822928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 50681044 - 50681152
Alignment:
Q  279 taagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcct 378  Q
    |||||||||| | ||||||||| ||||||| |||||| || | ||||||| |||||||||||| |||||| |||||||||||| ||||||||| |||| |    
T  50681044 taagttttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagctt 50681143  T
Q  379 ataaaaaca 387  Q
    ||| |||||    
T  50681144 atataaaca 50681152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 370
Target Start/End: Original strand, 25904150 - 25904269
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    |||||||||||||||||||| | | |||||| |||||| | ||||||||  ||| ||| |||||| |||||||| ||  |||||||||||| ||||| ||    
T  25904150 ttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataagcttttttcagct 25904249  T
Q  351 tattttcataagttctccaa 370  Q
    |||||| |||||||||||||    
T  25904250 tatttttataagttctccaa 25904269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 246 - 487
Target Start/End: Complemental strand, 41336908 - 41336659
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| | |  ||| |  |||||||  ||||| |||||||||||  |||||||||||| |||    
T  41336908 ttggattgacttatttgagtttatctactcacataagttttgtgagatagttaggaagaacttaagaaaacagcttatgacagttttcataagctttttt 41336809  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaacattt---------tactagaacagtttaacgttattttaccttttgctataaaagtaac 436  Q
    |||||||||||| ||| |||| ||   |||| || ||||||| ||         ||| | |||| |||||| |||||||| | |||||||||||| || |    
T  41336808 caacttattttcgtaaattcttcaccctagcttagaaaaacaatttataacatatacaaaaacaatttaactttattttatc-tttgctataaaaatagc 41336710  T
Q  437 atatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataa 487  Q
     ||||||||| |||| || |||||||||||| ||||| |||| ||| ||||    
T  41336709 ttatgcaagcctatacataagtgcttatcataataagaacttgtgctataa 41336659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 376
Target Start/End: Complemental strand, 29657527 - 29657402
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    ||||||||||||||||||||||| |||| ||||||||| | | || |||| ||||||| |||||| |||||||||||| ||||| |||| | ||| | ||    
T  29657527 ttgacttatttgagcttatctaccaacacaagttttgtgagattgcttgagagaacttatgaaaacagcttatgacaattttcaaaagcatttttgagct 29657428  T
Q  351 tattttcataagttctccaatgtagc 376  Q
    || |||||||| ||||| ||| ||||    
T  29657427 taatttcataacttctctaatatagc 29657402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 387
Target Start/End: Original strand, 39603124 - 39603233
Alignment:
Q  278 ataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcc 377  Q
    ||||||||||| | ||||||||  |||||||  ||||| |||||||||||| ||| |||||||| ||| || |||||||||||||||||||||| || |     
T  39603124 ataagttttgtgagactgtttgggagaacttaggaaaacagcttatgacaatttttataagctttttttaagttattttcataagttctccaatatacct 39603223  T
Q  378 tataaaaaca 387  Q
    ||||||||||    
T  39603224 tataaaaaca 39603233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 251 - 367
Target Start/End: Complemental strand, 22030346 - 22030230
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    ||||||||||||||||| |||| || |||||||||||| |  || ||||  ||||||| |||||| |||||||||||| ||||| |||||| | |||  |    
T  22030346 ttgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttctcaggt 22030247  T
Q  351 tattttcataagttctc 367  Q
    |||||||||||||||||    
T  22030246 tattttcataagttctc 22030230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 293 - 385
Target Start/End: Original strand, 46588042 - 46588134
Alignment:
Q  293 ctgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaa 385  Q
    ||||||| ||||||||  ||||||| |||||||||| |||||||||| | || |||||||||||||||||||||||||| || | ||||||||    
T  46588042 ctgtttggtagaacttacgaaaataacttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaa 46588134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 392
Target Start/End: Original strand, 7839347 - 7839429
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaacatttta 392  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| |||||||| |||| |||| |||||||||| ||||    
T  7839347 tgaaaacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaacaattta 7839429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 27043752 - 27043830
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatg 324  Q
    |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||  |||| || || ||||||||||||    
T  27043752 ttggattgacttatttgagcttatctactgacataagttttgtgaaactgtttggaagaagttatgcaaatagcttatg 27043830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 49940089 - 49940165
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagctta 322  Q
    |||| |||||||||||||||||| || |||||||||||||||| | ||||||||| ||||||| |||||| ||||||    
T  49940089 ttggattgacttatttgagcttacctgctaacataagttttgtgagactgtttgagagaacttatgaaaacagctta 49940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 370
Target Start/End: Original strand, 55414406 - 55414466
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaa 370  Q
    |||||| |||||||||||  |||||||||||| ||||||||||||||||||||||||||||    
T  55414406 tgaaaacagcttatgacatttttcataagcttttttcaacttattttcataagttctccaa 55414466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 257 - 392
Target Start/End: Original strand, 44862917 - 44863052
Alignment:
Q  257 tatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatttt 356  Q
    ||||||||||| ||||||  || ||||||||| | | ||||||  |||| || || ||| |  ||||||| | |||||||||||| |||||||||||||     
T  44862917 tatttgagcttgtctactggcaaaagttttgtgagattgtttgggagaaattgtgtaaagaaattatgacgattttcataagcttttttcaacttatttg 44863016  T
Q  357 cataagttctccaatgtagcctataaaaacatttta 392  Q
    |||||||||| |||| |||| |||||||||| ||||    
T  44863017 cataagttctacaatttagcttataaaaacaattta 44863052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 276 - 462
Target Start/End: Original strand, 54069369 - 54069564
Alignment:
Q  276 acataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtag 375  Q
    |||||||||||||   |||||||| ||| | ||||||||| ||||||  |||| |||||||||||  ||| |||||||||||||| ||||| |||| ||     
T  54069369 acataagttttgtgggactgtttggtaggatttttgaaaacagcttacaacaattttcataagctgtttttaacttattttcatatgttcttcaatataa 54069468  T
Q  376 cctataaaaaca---------ttttactagaacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgctt 462  Q
    | ||||||||||          | ||| | |||| |||||| |||||||| |||||| ||||||| || |||||||||||||||| || |||||||    
T  54069469 cttataaaaacaaattatagcatatacaaaaacaatttaacattattttatcttttgatataaaaatagcatatgcaagcttatacataagtgctt 54069564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 387
Target Start/End: Original strand, 40830964 - 40831092
Alignment:
Q  258 atttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttga-aaatagcttatgacaaatttcataagcttatttcaacttatttt 356  Q
    ||||||||||||||| |  |||||||||||| | |||||| |  |||| || ||| ||| |||||| ||||| ||| |||||||| |||||||||||||     
T  40830964 atttgagcttatctattg-cataagttttgtgagactgttcggaagaaattatgagaaacagcttacgacaacttttataagcttttttcaacttattt- 40831061  T
Q  357 cataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||||||||| |||| ||||||||||    
T  40831062 cataagttctccaatctagcttataaaaaca 40831092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 367
Target Start/End: Original strand, 35571553 - 35571674
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||   |  |||||  ||||||||| |||| ||||||| |||   ||||| ||||  |||    
T  35571553 ttggattggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttattacactgttcatgagctggttt 35571652  T
Q  346 caacttattttcataagttctc 367  Q
    ||||||||||||| ||||||||    
T  35571653 caacttattttcacaagttctc 35571674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 387
Target Start/End: Original strand, 39691076 - 39691206
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    ||||||||||||||||||||||||| |||||||||||| | ||||||||| |||| || ||  || |||||||      ||   |||| || ||||||||    
T  39691076 ttgacttatttgagcttatctactagcataagttttgtgagactgtttgagagaatttatgggaacagcttat------ttatctaagtttttttcaact 39691169  T
Q  351 tattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||| |||||||| |||| |||| ||||||||||    
T  39691170 tattttcgtaagttcttcaatatagcttataaaaaca 39691206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 46592197 - 46592270
Alignment:
Q  312 aaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaa 385  Q
    |||||| |||||||||| |||||||||| | || |||||||||||||||||||||||||| || | ||||||||    
T  46592197 aaaataacttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaa 46592270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 387
Target Start/End: Original strand, 50662716 - 50662801
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||| |||||| || | ||||||| |||||||||||| |||||||||||||||| || ||||||||| |||| |||| |||||    
T  50662716 agaacttatgaaaacagttaatgacaattttcataagcttttttcaacttattttcacaatttctccaatatagcttatataaaca 50662801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 56249640 - 56249533
Alignment:
Q  277 cataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagc 376  Q
    |||||||||||| | | ||||||  | ||||| | |||| |||||||||||  |||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  56249640 cataagttttgtgagattgtttggaacaacttatcaaaacagcttatgacat-tttcataagcttttttcaacttattttcttaagtcctccaatgtagc 56249542  T
Q  377 ctataaaaa 385  Q
     ||| ||||    
T  56249541 ttattaaaa 56249533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 362
Target Start/End: Complemental strand, 1706757 - 1706654
Alignment:
Q  259 tttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttca 358  Q
    |||||| ||||||||| ||||||||||||| | || |||||| |||| || |||||| |||||||| ||   ||||||||||  || |||||||||||||    
T  1706757 tttgagtttatctactgacataagttttgtgagacggtttgagagaaattatgaaaacagcttatggcattgttcataagctatttccaacttattttca 1706658  T
Q  359 taag 362  Q
    ||||    
T  1706657 taag 1706654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 405548 - 405470
Alignment:
Q  157 caaaaatagagagcatgaaggtaagaaactaggaaatgaatattttgatcattagcaacttggcattatcatttatcaa 235  Q
    |||||||| ||||||||||||||| ||||| || |||| ||| ||| |||||| ||||||||||||||| ||| |||||    
T  405548 caaaaataaagagcatgaaggtaataaacttgggaatggatactttcatcattggcaacttggcattattattcatcaa 405470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 292 - 370
Target Start/End: Complemental strand, 55064937 - 55064859
Alignment:
Q  292 actgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaa 370  Q
    ||||||||  |||||||||||||| | |||||||||  |||||  ||||| ||||| ||||||||||||||||||||||    
T  55064937 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcataagttctccaa 55064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 15177282 - 15177359
Alignment:
Q  395 agaacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataa 472  Q
    |||||| ||||||||||||||| |||| ||||| ||| || | |||||||||||||| ||  ||||||||||||||||    
T  15177282 agaacaatttaacgttattttatctttagctattaaaatagcttatgcaagcttatacatacgtgcttatcatgataa 15177359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 361
Target Start/End: Complemental strand, 1408105 - 1407989
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagct-tatt 344  Q
    |||| ||| |||||||||||||||||||  ||| ||||||||| | ||  ||||||||| |||  ||||| |||||||||||  ||||||||||| | ||    
T  1408105 ttggattggcttatttgagcttatctacatacacaagttttgtgagacgatttgatagagcttgagaaaacagcttatgacatttttcataagctgtttt 1408006  T
Q  345 tcaacttattttcataa 361  Q
    ||| ||||| |||||||    
T  1408005 tcagcttatcttcataa 1407989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 371
Target Start/End: Original strand, 39011055 - 39011175
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    ||||||||||||||||||||| |   ||||||| | || | || |||||  ||||| | |||||| |||||||||||  ||||||||    | |||||||    
T  39011055 ttgacttatttgagcttatcttcgggcataagtatcgtgagacagtttgggagaacatatgaaaacagcttatgacaggtttcataaaaaaaattcaact 39011154  T
Q  351 tattttcataagttctccaat 371  Q
    |||||||||||||||||||||    
T  39011155 tattttcataagttctccaat 39011175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 370
Target Start/End: Original strand, 52315119 - 52315243
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||||||||||| ||||||||| || |||||||||| | | ||||||  ||||||| | |||| | ||||| |||   |||||||| |  |||    
T  52315119 ttggattgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaacttatcacattattcataagttgcttt 52315218  T
Q  346 caacttattttcataagttctccaa 370  Q
    || |||||||||||||||| |||||    
T  52315219 cagcttattttcataagttttccaa 52315243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 326
Target Start/End: Complemental strand, 55437224 - 55437144
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgac 326  Q
    |||| ||| |||||||||| |||||||||  |||||||||||| ||| ||||||| ||||||| |||||| | ||||||||    
T  55437224 ttggattggcttatttgagtttatctactgccataagttttgtgaaattgtttgaaagaacttatgaaaacaacttatgac 55437144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 364
Target Start/End: Complemental strand, 23459764 - 23459658
Alignment:
Q  257 tatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatttt 356  Q
    ||||||||||||||||||| ||||||| | |||| |||||||   ||||||| |||||| |||||||||| |  || ||||| |  ||||||||||| ||    
T  23459764 tatttgagcttatctactagcataagtatggtaagactgtttcggagaacttatgaaaaaagcttatgac-atgttaataagttattttcaacttatatt 23459666  T
Q  357 cataagtt 364  Q
    ||||||||    
T  23459665 cataagtt 23459658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 49939882 - 49939981
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    ||||||| ||||||||||||| |||||| ||||| | ||| ||||  ||||||| |||||| |||||||||||   ||||||||||  ||||| ||||||    
T  49939882 cttatttaagcttatctactagcataagctttgtgagactatttggaagaacttatgaaaagagcttatgacattgttcataagctgttttcagcttatt 49939981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 49003802 - 49003912
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    |||||||||||||||||||| ||| || |||||||||| |||| |||||  ||||  | |||||| ||| |||||||   ||||||||||| || || ||    
T  49003802 ttgacttatttgagcttatccactgacgtaagttttgtgaaacggtttgggagaaaatatgaaaagagcgtatgacattgttcataagctttttccagct 49003901  T
Q  351 tattttcataa 361  Q
    || ||||||||    
T  49003902 taatttcataa 49003912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 49003973 - 49004035
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaata 317  Q
    ||||||||||||||||||||| | |||||||||| | ||| ||||| ||||||| ||||||||    
T  49003973 cttatttgagcttatctactagcttaagttttgtgagactatttgagagaacttatgaaaata 49004035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 18815171 - 18815110
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaact 307  Q
    |||| ||| |||||||||||||| |||||| |||||||||||| | ||||||||| ||||||    
T  18815171 ttggattggcttatttgagcttacctactagcataagttttgtgagactgtttgagagaact 18815110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 387
Target Start/End: Complemental strand, 40174700 - 40174570
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    |||| ||||||||| ||||||||||||||||||||||| | ||||||||  | ||||| |||||| |      ||||   | ||||| ||  ||||||||    
T  40174700 ttgatttatttgagtttatctactaacataagttttgtgagactgtttgggataacttatgaaaaca------gacattgtccataaactgttttcaact 40174607  T
Q  351 tattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||| ||| ||||||||||||||||| ||| ||||||    
T  40174606 tattatcacaagttctccaatgtagcttatgaaaaca 40174570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 42403945 - 42404037
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagc 339  Q
    |||| |||||||||||||||||||| ||| |||||||||||||    || ||||  |||| || |||||| |||||||||||| ||||||||||    
T  42403945 ttggattgacttatttgagcttatcaactgacataagttttgt-gtgctatttgggagaatttctgaaaacagcttatgacaattttcataagc 42404037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 387
Target Start/End: Original strand, 53294036 - 53294177
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||| ||||| ||||||||||| |||| |||||||||| ||||||||  | ||||  |||||| |  ||||||    ||||| |||||  |||    
T  53294036 ttggattgactaatttgtgcttatctactgacatgagttttgtaagactgtttgggaaaactcatgaaaacaaattatgatggttttcaaaagctatttt 53294135  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    || ||| ||||||||||||||| ||| |||  ||||||||||    
T  53294136 cagcttgttttcataagttctctaatatagtttataaaaaca 53294177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 55302326 - 55302273
Alignment:
Q  317 agcttatgacaaatttcataagcttatttcaacttattttcataagttctccaa 370  Q
    |||||||||||| |||| ||||||| ||||| |||||||||||||||| |||||    
T  55302326 agcttatgacaattttcgtaagcttttttcagcttattttcataagttttccaa 55302273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 371
Target Start/End: Original strand, 1374507 - 1374623
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||| |||||||||||||||| ||||| |||||| |  |||||||  ||||  | |||||| | ||||||||||  |||||||  |  ||||||||||||    
T  1374507 cttaattgagcttatctactagcataaattttgtgattctgtttgggagaatatatgaaaacaacttatgacaatattcataaattattttcaacttatt 1374606  T
Q  355 ttcataagttctccaat 371  Q
    |||||||  ||||||||    
T  1374607 ttcataaaatctccaat 1374623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 368
Target Start/End: Complemental strand, 21523675 - 21523584
Alignment:
Q  276 acataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctcc 368  Q
    |||||| |||||| | ||||||||  |||| || |||||| | |||||||||  |||||||||||| ||||| ||||||||||||| ||||||    
T  21523675 acataaattttgtgacactgtttggaagaatttatgaaaacaacttatgacatttttcataagctt-tttcagcttattttcataacttctcc 21523584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 387
Target Start/End: Original strand, 33586962 - 33587018
Alignment:
Q  331 ttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||||| | | |||||||||||||||||||||| || |||| ||||||||||    
T  33586962 ttcataagcttttcttaacttattttcataagttctccgatatagcttataaaaaca 33587018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 515
Target Start/End: Complemental strand, 18815020 - 18814962
Alignment:
Q  456 agtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    ||||||||| ||||||||||||| ||| |||| |||||||||| || |||||||||||||    
T  18815020 agtgcttat-atgataagcacttgtgccataagctgcaaataaaccatttatccaaacag 18814962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 27330007 - 27330110
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    ||||||| |||||||||||| ||||||||||  | | | ||||||| || | || |||||| | |||||||||| || ||||| ||| |||||| |||||    
T  27330007 cttatttaagcttatctacttacataagtttaatgagattgtttgagaggatttatgaaaacaacttatgacaatttgcataaccttttttcaaattatt 27330106  T
Q  355 ttca 358  Q
    ||||    
T  27330107 ttca 27330110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 327
Target Start/End: Original strand, 34430626 - 34430701
Alignment:
Q  252 tgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||||||||||||||||| ||||| ||||||||||||  ||||||| |  ||||||| | |||| |||||| ||||    
T  34430626 tgacttatttgagcttatttactagcataagttttgtgcaactgttcggaagaacttataaaaacagcttaagaca 34430701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 515
Target Start/End: Original strand, 35571747 - 35571817
Alignment:
Q  444 agcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||||||| || |||| ||||||| ||||||||||| || |||||| |||||||||  ||||||||||||||    
T  35571747 agcttatacataagtg-ttatcatcataagcacttccgctataaacggcaaataaggtgtttatccaaacag 35571817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 514
Target Start/End: Complemental strand, 11389461 - 11389407
Alignment:
Q  460 cttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaaca 514  Q
    ||||||||||||||||||  ||  ||||||||||||||||  |||||||||||||    
T  11389461 cttatcatgataagcactcatgatataaactgcaaataagttgtttatccaaaca 11389407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 9760484 - 9760447
Alignment:
Q  350 ttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  9760484 ttattttcataagttctccaatatagcttataaaaaca 9760447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 20109677 - 20109612
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctc 367  Q
    |||||||||||||| |||||||||||  ||||||||| || ||||  || ||||| ||||||||||    
T  20109677 agaacttttgaaaacagcttatgacatttttcataagtttttttctgctgatttttataagttctc 20109612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 25903934 - 25903854
Alignment:
Q  264 gcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    ||||||||||||||||||||||||| | |||  |||  ||||||| || ||| |||||||| ||  ||||||||||||||||    
T  25903934 gcttatctactaacataagttttgtgagacttattgggagaacttatg-aaacagcttatggcatttttcataagcttattt 25903854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 387
Target Start/End: Original strand, 30668345 - 30668429
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||| |||||| |||||||||||  |||||||||||| ||||| |||| ||||||||  | |||||  |||| ||||||||||    
T  30668345 agaacttgtgaaaacagcttatgacacttttcataagctt-tttcagcttaatttcataaactatccaagatagcttataaaaaca 30668429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 27027 - 27083
Alignment:
Q  459 gcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||||||||||||||| ||| ||| |||| ||||||| |||  ||||||||||||||    
T  27027 gcttatcatgataagcgcttgtgctataagctgcaaacaagatgtttatccaaacag 27083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 1242362 - 1242455
Alignment:
Q  402 tttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataag 499  Q
    ||||||||||||||   ||||||||||||| || | |||    ||||||| || ||||||||| ||||||||||||| | | |||| |||||||||||    
T  1242362 tttaacgttattttctattttgctataaaaatagcttat----gcttataaataagtgcttattatgataagcacttatactataagctgcaaataag 1242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 22662173 - 22662209
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataag 282  Q
    |||| |||||||||||||| |||||||||||||||||    
T  22662173 ttggattgacttatttgagtttatctactaacataag 22662209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 22666652 - 22666688
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataag 282  Q
    |||| |||||||||||||| |||||||||||||||||    
T  22666652 ttggattgacttatttgagtttatctactaacataag 22666688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 29913087 - 29912972
Alignment:
Q  254 acttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttat 353  Q
    |||||||||||||||| | |   |||||||||||  ||||||||||  ||||||| |||||||||||| |||||  |||| | || |  ||||| |||||    
T  29913087 acttatttgagcttatatgcagccataagttttgcgaaactgtttgggagaacttatgaaaatagctt-tgacatttttccttagttcttttcagcttat 29912989  T
Q  354 tttcataagttctccaa 370  Q
    ||| ||||||| |||||    
T  29912988 ttttataagttgtccaa 29912972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 274
Target Start/End: Original strand, 53034721 - 53034749
Alignment:
Q  246 ttggtttgacttatttgagcttatctact 274  Q
    |||||||||||||||||||||||||||||    
T  53034721 ttggtttgacttatttgagcttatctact 53034749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 246 - 387
Target Start/End: Original strand, 16937805 - 16937946
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||||||||||||||||| |||||||||||| | | ||||||  ||||||| |||||| ||||||||||||||||||||||||| |||    
T  16937805 ttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagctttttt 16937904  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    || ||||||||| ||||||||||||| |||| ||||||||||    
T  16937905 cagcttattttcctaagttctccaatatagcgtataaaaaca 16937946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 10640092 - 10639977
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||| ||||||||| ||||||||||||| | | ||||||  ||||||| |||||| |||||||||||  |||||||||||| ||  | ||||||    
T  10640092 cttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataagctttttctagcttatt 10639993  T
Q  355 ttcataagttctccaa 370  Q
    ||||||||||||||||    
T  10639992 ttcataagttctccaa 10639977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 246 - 387
Target Start/End: Original strand, 25461570 - 25461710
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||||||||||||||  | ||||||||| || | |||||||| ||||| | ||| |||||||||||| ||| ||||||||||||   |    
T  25461570 ttggattggcttatttgagcttatctatcagcataagttt-gtgatactgtttggtagaattcttggaaatagcttatggcaattttcataagctttgat 25461668  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||||| ||||||||||||||  ||| ||||||||||    
T  25461669 caacttattttaataagttctccaatagagcttataaaaaca 25461710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 256 - 384
Target Start/End: Original strand, 12857637 - 12857765
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    ||||||||||| ||||| | || |||||||||| ||||||||    ||||||| |||||| | |||||||||| ||||| || ||| ||||| |||||||    
T  12857637 ttatttgagctcatctattgacgtaagttttgtgaaactgttccggagaacttatgaaaacaacttatgacaattttcacaaccttttttcagcttattt 12857736  T
Q  356 tcataagttctccaatgtagcctataaaa 384  Q
    |||||||||||||||| |||| |||||||    
T  12857737 tcataagttctccaatatagcttataaaa 12857765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 451
Target Start/End: Original strand, 42500175 - 42500361
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    |||||||  |||| ||||| ||||||||||||| | ||| ||||  ||||||| || ||| | |||| ||||| |||||||||||| |||||||||||||    
T  42500175 ttatttggacttacctactgacataagttttgtgagactctttgg-agaacttatggaaacaacttacgacaattttcataagctt-tttcaacttattt 42500272  T
Q  356 tcataagttctccaatgtagcctataaaaacattttactagaacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttata 451  Q
    |||||||||||||||| |||| |||| | |||       | |||| |||||| |||||||| |||||| ||||||| || | ||||||||||||||    
T  42500273 tcataagttctccaatatagcttatatacaca-------aaaacaatttaactttattttatcttttgatataaaaatagcttatgcaagcttata 42500361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 256 - 384
Target Start/End: Original strand, 12857270 - 12857398
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    ||||||||||||||||| | || |||||||||| ||||| ||    ||||||| |||||| | |||||||||| ||||| |||||| ||||| |||||||    
T  12857270 ttatttgagcttatctattgacgtaagttttgtgaaacttttccggagaacttatgaaaacaacttatgacaattttcacaagcttttttcagcttattt 12857369  T
Q  356 tcataagttctccaatgtagcctataaaa 384  Q
    |  ||||||||||||| |||| |||||||    
T  12857370 ttgtaagttctccaatatagcttataaaa 12857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 256 - 376
Target Start/End: Complemental strand, 29925978 - 29925859
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    ||||||| |||||||||||| || ||||||||| | || |||||  ||||||| |||||| ||||||||||||  |||||  | || |||||||||||||    
T  29925978 ttatttgggcttatctactagca-aagttttgtgagaccgtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattt 29925880  T
Q  356 tcataagttctccaatgtagc 376  Q
    |||||||||||||||| ||||    
T  29925879 tcataagttctccaatatagc 29925859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 369
Target Start/End: Original strand, 3932598 - 3932721
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||| |||||||||||||||  |||||||| ||||| | ||||||||| | |||||   |||| ||||||||| || |||||||||||| ||     
T  3932598 ttggattgactaatttgagcttatctaacaacataagctttgtgagactgtttgagaaaacttgcaaaaacagcttatgataattttcataagcttttta 3932697  T
Q  346 caacttattttcataagttctcca 369  Q
    || ||||||||| |||||||||||    
T  3932698 cagcttattttcgtaagttctcca 3932721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 376
Target Start/End: Original strand, 7705920 - 7706050
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||||||||||||||| ||||||||| |||||||||||| |  || ||||  ||||||| |||||| |||||||||||  |||||   |||| |||    
T  7705920 ttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacctgctttttt 7706019  T
Q  346 caacttattttcataagttctccaatgtagc 376  Q
    |  |||||||||| |||||||||||| ||||    
T  7706020 cggcttattttcacaagttctccaatatagc 7706050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 371
Target Start/End: Complemental strand, 9107238 - 9107113
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||||||||||| ||||||| | ||||||||||||| | | ||||||  ||||||  |||||| |||||| ||||| ||||| || ||| |||    
T  9107238 ttggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttcacaaactttttt 9107139  T
Q  346 caacttattttcataagttctccaat 371  Q
    |  || ||||||||||||||||||||    
T  9107138 ctgctaattttcataagttctccaat 9107113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 11064814 - 11064733
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||| |||| ||||||||| |||||||| |||||||||||||| | | ||||||| ||||||| ||||||||||||||||||    
T  11064814 ttggattgatttatttgagtttatctaccaacataagttttgtgagattgtttgagagaacttatgaaaatagcttatgaca 11064733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 387
Target Start/End: Complemental strand, 37954770 - 37954693
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| ||||||||| || |||||| ||||| |||||||||||||||||| |||||||||| |||| ||||||||||    
T  37954770 tgaaaacagcttatgaaaattttcattagcttttttcaacttattttcatatgttctccaatatagcttataaaaaca 37954693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 367
Target Start/End: Complemental strand, 42100450 - 42100338
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||||||||||| |  ||||| ||||||   ||||| ||| ||||||| |||||||||||||||||| | |||| ||| |  ||||| ||||||    
T  42100450 cttatttgagcttatctattggcataaattttgtgtgactgtgtgagagaacttgtgaaaatagcttatgacatagttcaaaaggtgttttcatcttatt 42100351  T
Q  355 ttcataagttctc 367  Q
    |||||||||||||    
T  42100350 ttcataagttctc 42100338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 16457935 - 16458042
Alignment:
Q  280 aagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagccta 379  Q
    ||||||||| | ||||||||  ||||||| |||||| |||||||||||  |||||||||||  |||||  ||||||||| |||||||||||| ||||  |    
T  16457935 aagttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctca 16458034  T
Q  380 taaaaaca 387  Q
    ||||||||    
T  16458035 taaaaaca 16458042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 246 - 392
Target Start/End: Complemental strand, 32009841 - 32009694
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataa-gcttatt 344  Q
    |||| ||||| ||||||||  |||||  | || |||||||||| | ||| ||||  | ||||| |||||| ||||| |||||| |||||||| |||| ||    
T  32009841 ttggattgacatatttgagtctatctgttgacctaagttttgtgagactatttggaaaaacttatgaaaacagcttgtgacaattttcataaagcttttt 32009742  T
Q  345 tcaacttattttcataagttctccaatgtagcctataaaaacatttta 392  Q
    | ||||| ||||||||||||||||||| |||| |||||||||| ||||    
T  32009741 tgaacttgttttcataagttctccaatatagcttataaaaacaattta 32009694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 251 - 370
Target Start/End: Complemental strand, 40426908 - 40426789
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    |||||||||||||||||||||| | |||||| |||||| | ||||||||   |  ||| |||||| |||||||| ||  |||||||||||| ||| | ||    
T  40426908 ttgacttatttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttatgccatttttcataagcttttttaagct 40426809  T
Q  351 tattttcataagttctccaa 370  Q
    ||||||| ||||||||||||    
T  40426808 tattttcgtaagttctccaa 40426789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 246 - 370
Target Start/End: Original strand, 40438876 - 40438999
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||| ||| |||||||  |||||||||||||||   |||||  ||||| |||||||| | ||| |||||  |||||||||||| |||    
T  40438876 ttggattggcttatttgggctcatctactggcataagttttgtaaagacgtttgggagaacatttgaaaacaacttgtgacatttttcataagctt-ttt 40438974  T
Q  346 caacttattttcataagttctccaa 370  Q
    ||| ||||||||||| |||||||||    
T  40438975 caatttattttcatatgttctccaa 40438999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 367
Target Start/End: Original strand, 3735126 - 3735201
Alignment:
Q  292 actgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctc 367  Q
    |||||||| |||||||  |||||| |||||||||||| ||||| |||||| ||||| ||||| |||||||||||||    
T  3735126 actgtttggtagaactgatgaaaacagcttatgacaattttcaaaagcttttttcagcttatcttcataagttctc 3735201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 367
Target Start/End: Complemental strand, 15015987 - 15015874
Alignment:
Q  250 tttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaac 349  Q
    |||| |||||||||||||||||||| ||||||| ||||| | ||||||||  ||||||| ||||||||  | | ||||| ||||||||| || |||||||    
T  15015987 tttggcttatttgagcttatctactgacataagctttgtgagactgtttgggagaacttatgaaaata-ttgaagacaattttcataagattttttcaac 15015889  T
Q  350 ttattttcataagttctc 367  Q
       |||||||||||||||    
T  15015888 ---ttttcataagttctc 15015874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 369
Target Start/End: Complemental strand, 11700301 - 11700188
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||||||||| |||  |||||||||||| | ||||||| | ||||||| || ||| | |||||||||   |||||||  || ||||| ||||||    
T  11700301 cttatttgagcttatccactggcataagttttgtgagactgtttcacagaacttatggaaacaacttatgacattgttcataa-attgtttcatcttatt 11700203  T
Q  355 ttcataagttctcca 369  Q
    |||||||||||||||    
T  11700202 ttcataagttctcca 11700188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 19460508 - 19460572
Alignment:
Q  447 ttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaa 511  Q
    ||||| || |||||||||||||||||||| || ||| |||| |||||||||||| ||||||||||    
T  19460508 ttatacataagtgcttatcatgataagcatttgtgctataagctgcaaataagctgtttatccaa 19460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 9202675 - 9202790
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    ||||||||||||||||||||| ||  |||||||||||||| ||| |||   | ||||  || ||| |||||||||||   ||||||||||  || || ||    
T  9202675 ttgacttatttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatgacattgttcataagctgtttccagct 9202774  T
Q  351 tattttcataagttct 366  Q
    ||||||||||||||||    
T  9202775 tattttcataagttct 9202790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 371
Target Start/End: Complemental strand, 25461193 - 25461114
Alignment:
Q  292 actgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaat 371  Q
    |||||||| ||||||||||| ||  |||||||| ||| |||||||| | | ||||| ||||||||||| |||||||||||    
T  25461193 actgtttggtagaacttttggaatcagcttatggcaattttcataaacgtttttcagcttattttcatcagttctccaat 25461114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 369
Target Start/End: Complemental strand, 35446147 - 35446080
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctcca 369  Q
    |||||||| ||||| || ||||||||  |||| ||||||| ||||| |||||||||||||||||||||    
T  35446147 agaactttcgaaaacagtttatgacatttttcgtaagcttttttcagcttattttcataagttctcca 35446080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 392
Target Start/End: Complemental strand, 7674795 - 7674650
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||||||||||||||  || |||||||||| | |||| |||  ||||||| || ||| | |||||||||  ||| ||||| |  |||    
T  7674795 ttggattggcttatttgagcttatctacctacttaagttttgtgagactgcttggaagaacttatggaaacaacttatgacatgttt-ataaggtgtttt 7674697  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaacatttta 392  Q
    || |||||||||| || ||||||||  |||| ||| |||||||||||    
T  7674696 cagcttattttcacaaattctccaagatagcttatgaaaacatttta 7674650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 8334663 - 8334601
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagtt 364  Q
    ||||||| |||||||||||||||||| |||||||||  |  ||||| ||||||||||||||||    
T  8334663 agaacttatgaaaatagcttatgacatatttcataaattgttttcagcttattttcataagtt 8334601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 12425717 - 12425659
Alignment:
Q  250 tttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaactt 308  Q
    |||||||||||||||||||||||||  |||||||||||| | ||||||||  |||||||    
T  12425717 tttgacttatttgagcttatctactgtcataagttttgtgagactgtttgggagaactt 12425659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 515
Target Start/End: Complemental strand, 32941446 - 32941341
Alignment:
Q  409 ttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatc 508  Q
    |||||||| |||||||| ||||| || | ||||||||||||||  | || |||||||||| ||||  ||| ||| |||| |||| ||||||| |||||||    
T  32941446 ttattttatcttttgctctaaaactagcctatgcaagcttatacgtaagcgcttatcatggtaagtgctt-tgctataagctgctaataagctgtttatc 32941348  T
Q  509 caaacag 515  Q
    |||||||    
T  32941347 caaacag 32941341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 403 - 464
Target Start/End: Complemental strand, 7999188 - 7999127
Alignment:
Q  403 ttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttat 464  Q
    ||||| |||||||||||||||| |||||| |||| |||||||||||||| || || ||||||    
T  7999188 ttaacattattttaccttttgccataaaaataacttatgcaagcttatacataagcgcttat 7999127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 32010093 - 32010024
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaa 315  Q
    |||| |||||||||||||| ||||||||| ||||||||||  | | ||||||||| ||||||| ||||||    
T  32010093 ttggattgacttatttgagtttatctactcacataagtttcttcagactgtttgagagaacttatgaaaa 32010024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 327
Target Start/End: Original strand, 34736449 - 34736530
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||| |||||||||||||||||||||  | ||||||||||||| | || |||||  |||||||||||| | |||| ||||||    
T  34736449 ttggattgacttatttgagcttatctggtgacataagttttgtgagacagtttgggagaacttttgaacacagctaatgaca 34736530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 41419467 - 41419386
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||| |||||||||||||||| ||||||| |||||| |||||| | | ||||||  | ||||| |||||| |||||||||||    
T  41419467 ttggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgaca 41419386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 512
Target Start/End: Original strand, 1465138 - 1465206
Alignment:
Q  444 agcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaa 512  Q
    |||||||| || || ||||||| |||||||||||| ||| ||||||||| ||||| | |||||||||||    
T  1465138 agcttatacataagcgcttatcttgataagcacttatgctataaactgcgaataatctgtttatccaaa 1465206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 343
Target Start/End: Complemental strand, 3520716 - 3520628
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttat 343  Q
    |||||||||||| ||||||||  ||||||| ||| | ||||||||  ||||||| |||||| | ||||||||   ||||||||||||||    
T  3520716 cttatttgagctcatctactagtataagttgtgtgagactgtttgggagaacttatgaaaacatcttatgacttttttcataagcttat 3520628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 515
Target Start/End: Original strand, 3735579 - 3735691
Alignment:
Q  403 ttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccg 502  Q
    ||||| |||||| | ||||||||||| || || | |||| ||||||||  || || |||||||||||||| | ||| ||| |||| ||||||||| |  |    
T  3735579 ttaactttatttcatcttttgctatagaaatagcttatgtaagcttatccataagcgcttatcatgataatctcttgtgctataagctgcaaataggttg 3735678  T
Q  503 tttatccaaacag 515  Q
    |||||||||||||    
T  3735679 tttatccaaacag 3735691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 356
Target Start/End: Complemental strand, 15246971 - 15246871
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    ||||||||||||||||||| ||||||||||| | | | ||||||  ||||||| |||||  | |||||||||   |||||||| || || ||||||||||    
T  15246971 ttatttgagcttatctactgacataagttttattagaatgtttgggagaacttatgaaagcaacttatgacatcattcataagttttttgcaacttattt 15246872  T
Q  356 t 356  Q
    |    
T  15246871 t 15246871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 35445775 - 35445843
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttat 323  Q
    |||||||||| ||||||||| ||||||||||||| | ||| ||||| |||| || |||||| |||||||    
T  35445775 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 35445843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 326
Target Start/End: Complemental strand, 41534586 - 41534506
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgac 326  Q
    |||| |||||||||||||||| ||||||| |||||| |||||| | | ||||||  | ||||| |||||| ||||||||||    
T  41534586 ttggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgac 41534506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 513
Target Start/End: Original strand, 7319134 - 7319209
Alignment:
Q  438 tatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaac 513  Q
    |||| ||||||||  || ||||||||||||||||||| ||| ||| |||| ||| |||||||| |||||| |||||    
T  7319134 tatgtaagcttatgcataagtgcttatcatgataagcgcttgtgctataagctgtaaataagctgtttattcaaac 7319209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 9202883 - 9202938
Alignment:
Q  460 cttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    ||||||||||||| ||||| ||| |||| |||||||||||  ||||||||||||||    
T  9202883 cttatcatgataaacacttgtgctataagctgcaaataagatgtttatccaaacag 9202938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 337
Target Start/End: Original strand, 34102243 - 34102326
Alignment:
Q  254 acttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataa 337  Q
    ||||||||||||||| ||| |  |||||||||||| | ||||||||   ||| || ||||||||||||| ||||| ||||||||    
T  34102243 acttatttgagcttaactattggcataagttttgtgacactgtttgggggaatttatgaaaatagcttaagacaattttcataa 34102326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 37969019 - 37968952
Alignment:
Q  252 tgacttatttgagcttatctactaacataagt-tttgtaaaactgtttgatagaacttttgaaaatag 318  Q
    |||||| |||||||||||||||| ||||||||  |||| ||||||||||| ||| ||| |||||||||    
T  37969019 tgacttgtttgagcttatctactgacataagtacttgtgaaactgtttgagagatcttatgaaaatag 37968952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 39105415 - 39105360
Alignment:
Q  444 agcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataag 499  Q
    |||||||| || || |||||||||||||||||||| ||| |||| |||||||||||    
T  39105415 agcttatacataagcgcttatcatgataagcacttatgctataagctgcaaataag 39105360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 365
Target Start/End: Complemental strand, 39594955 - 39594836
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||||||||||||||||||||  ||||||||||||| | | ||||||  | ||||| |||||| |||| | || ||  ||  |||| |  |||    
T  39594955 ttggattgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacagctgaagataatgttattaagttgtttt 39594856  T
Q  346 caacttattttcataagttc 365  Q
    || |||||||||||||||||    
T  39594855 cagcttattttcataagttc 39594836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 384
Target Start/End: Original strand, 13697765 - 13697819
Alignment:
Q  330 tttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaa 384  Q
    ||||||||| || ||||||||||||||||||| ||||||||  |||| |||||||    
T  13697765 tttcataagtttttttcaacttattttcataacttctccaacatagcttataaaa 13697819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 514
Target Start/End: Original strand, 24030547 - 24030601
Alignment:
Q  460 cttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaaca 514  Q
    ||||||||||||||  ||| ||| |||| |||||||||||| |||||||||||||    
T  24030547 cttatcatgataagtgcttgtgctataagctgcaaataagctgtttatccaaaca 24030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 371
Target Start/End: Complemental strand, 32941618 - 32941494
Alignment:
Q  246 ttggtttgacttatttgagctt-atctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatt 344  Q
    |||| |||||||||| |||||| ||||||| ||||||||| ||| | || |||||  ||||||| |||||| ||  |||| ||| ||| |||| ||| ||    
T  32941618 ttggattgacttattagagctttatctactgacataagttctgtgagaccgtttgggagaacttatgaaaacagaatatgccaatttt-ataatctt-tt 32941521  T
Q  345 tcaacttattttcataagttctccaat 371  Q
    |||||||| ||| ||||||||||||||    
T  32941520 tcaacttactttaataagttctccaat 32941494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 384
Target Start/End: Original strand, 1464947 - 1465080
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    |||||||||||||||||| || ||| |||||||| ||  | |||||| |  ||||||| |||||| |||||||| ||    ||||||| |  ||||| ||    
T  1464947 ttgacttatttgagcttagcttctagcataagttctgcgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagct 1465046  T
Q  351 tattttcataagttctccaatgtagcctataaaa 384  Q
    |||||||| |||| ||||||  |||| |||||||    
T  1465047 tattttcacaagtcctccaagatagcttataaaa 1465080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 7706126 - 7706179
Alignment:
Q  462 tatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    ||||||||||||||||| ||| |||| |||||||||||  |||||| |||||||    
T  7706126 tatcatgataagcacttgtgctataacctgcaaataagttgtttatacaaacag 7706179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 359
Target Start/End: Complemental strand, 7808645 - 7808540
Alignment:
Q  254 acttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttat 353  Q
    |||||||||| ||| ||||||| |||| ||| | | | ||||||||  ||| ||| |||||||||||||| |||   ||||||||||  ||||| |||||    
T  7808645 acttatttgaacttttctactagcatatgttatttgagactgtttgggagagcttatgaaaatagcttataacattgttcataagctgttttcagcttat 7808546  T
Q  354 tttcat 359  Q
    ||||||    
T  7808545 tttcat 7808540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 15015834 - 15015785
Alignment:
Q  402 tttaacgttattttaccttttgctataaaagtaacatatgcaagcttata 451  Q
    ||||||||||||| ||||||||||| |||| || | ||||||||||||||    
T  15015834 tttaacgttatttcaccttttgctacaaaaatagcttatgcaagcttata 15015785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 473
Target Start/End: Original strand, 16458071 - 16458136
Alignment:
Q  408 gttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataag 473  Q
    ||||||||| |||||||||||||| || | |||||||||||||| || ||  ||||||| ||||||    
T  16458071 gttattttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatcaggataag 16458136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 31038418 - 31038337
Alignment:
Q  260 ttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagctt 341  Q
    ||||||||||||||   |||||||||||| | |||||||   | ||||| | ||||||||||||||||  ||||||||||||    
T  31038418 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctt 31038337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 31047642 - 31047561
Alignment:
Q  260 ttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagctt 341  Q
    ||||||||||||||   |||||||||||| | |||||||   | ||||| | ||||||||||||||||  ||||||||||||    
T  31047642 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctt 31047561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 387
Target Start/End: Complemental strand, 39105548 - 39105471
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| |||||||||||   ||||||||||  ||| | ||||||||||||||||||||||  |||| ||| ||||||    
T  39105548 tgaaaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaaca 39105471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 42568952 - 42569013
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaact 307  Q
    |||| |||||||||||||| ||||  |||||||||||||| || | ||||||||| ||||||    
T  42568952 ttggattgacttatttgagtttatgcactaacataagtttcgtgagactgtttgacagaact 42569013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 387
Target Start/End: Complemental strand, 43301026 - 43300885
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||||||||||| || |  |||||||||| | | |||||| |  |||| || | |||| ||| |||||||  ||  |||||| | |||    
T  43301026 ttggattggcttatttgagcttatataatggcataagttttatgagactgttggggagaagttataaaaacagcctatgacattttatataagcatgttt 43300927  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    || ||||||||||||||||||||||  |||| || |||||||    
T  43300926 cagcttattttcataagttctccaagatagcttacaaaaaca 43300885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 2973465 - 2973557
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagtttt-gtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataa 337  Q
    |||| ||| ||||||| |||||||||| | ||||||||||| || || ||| ||   ||||||| |||||| |||||||||||| ||||||||    
T  2973465 ttggattggcttatttaagcttatctagtgacataagtttttgtgaacctgcttaggagaacttatgaaaacagcttatgacaattttcataa 2973557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 387
Target Start/End: Original strand, 4014431 - 4014487
Alignment:
Q  331 ttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||||  ||||| ||||||||||||||||||||||  |||| ||| ||||||    
T  4014431 ttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaaca 4014487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 4625874 - 4625834
Alignment:
Q  249 gtttgacttatttgagcttatctactaacataagttttgta 289  Q
    |||||||||||||||||||||||||  | ||||||||||||    
T  4625874 gtttgacttatttgagcttatctacggaaataagttttgta 4625834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 10502395 - 10502443
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaact 294  Q
    |||| ||| ||||||||| ||||||| ||||||||||||||||| ||||    
T  10502395 ttggattggcttatttgaccttatctgctaacataagttttgtagaact 10502443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 385
Target Start/End: Complemental strand, 14788896 - 14788825
Alignment:
Q  313 aaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaa 385  Q
    |||||||||||||||| |||||||||||| ||| || ||||||| |||| ||||  |||||| | ||||||||    
T  14788896 aaatagcttatgacaactttcataagctt-ttttaatttattttaataaattcttaaatgtaacttataaaaa 14788825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 15557171 - 15557203
Alignment:
Q  258 atttgagcttatctactaacataagttttgtaa 290  Q
    |||||| ||||||||||||||||||||||||||    
T  15557171 atttgaacttatctactaacataagttttgtaa 15557203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 22209746 - 22209786
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagtttt 286  Q
    |||| ||||||||||||||||||||||||  ||||||||||    
T  22209746 ttggattgacttatttgagcttatctactggcataagtttt 22209786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 368
Target Start/End: Original strand, 32859672 - 32859763
Alignment:
Q  276 acataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctcc 368  Q
    |||||| |||||| | ||||||||  |||| || |||||| | |||| ||||  |||||||||||| ||||| ||||||||||||| ||||||    
T  32859672 acataaattttgtgacactgtttggaagaatttatgaaaacaacttacgacatttttcataagctt-tttcagcttattttcataacttctcc 32859763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 368
Target Start/End: Original strand, 32861844 - 32861935
Alignment:
Q  276 acataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctcc 368  Q
    |||||| |||||| | ||||||||  |||| || |||||| | |||| ||||  |||||||||||| ||||| ||||||||||||| ||||||    
T  32861844 acataaattttgtgacactgtttggaagaatttatgaaaacaacttacgacatttttcataagctt-tttcagcttattttcataacttctcc 32861935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 32942742 - 32942650
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataag 338  Q
    |||| |||||||||  |||||| |||||| |||||||||||||   ||||||||  |||| || |||| | |||||||||||  |||||||||    
T  32942742 ttggattgacttatacgagcttttctactgacataagttttgtttgactgtttgggagaatttatgaatacagcttatgacatttttcataag 32942650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 438 - 514
Target Start/End: Original strand, 40439078 - 40439153
Alignment:
Q  438 tatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaaca 514  Q
    |||| ||||||||| |||||||| ||||| ||||||| ||| || | |||  ||||||||||| |||||||||||||    
T  40439078 tatgtaagcttatacatgagtgcctatcaagataagcgcttgtgta-taaggtgcaaataagctgtttatccaaaca 40439153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 41535520 - 41535448
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    ||||||| |||||||||||| | || |||||||| |||| |||||  ||||||| |||||| | |||||||||    
T  41535520 cttatttaagcttatctacttatatcagttttgtgaaacagtttgggagaacttatgaaaacaacttatgaca 41535448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 42646818 - 42646770
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaact 294  Q
    |||| |||||||| |||||||||||||||   |||||||||||||||||    
T  42646818 ttggattgacttacttgagcttatctacttgaataagttttgtaaaact 42646770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 4e-36; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 246 - 387
Target Start/End: Complemental strand, 39980877 - 39980736
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||| ||||||||||||||||| |||||||||||| | ||||||| | ||||||| |||||| ||||||||||   |||||||||||| |||    
T  39980877 ttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagctttttt 39980778  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  39980777 caacttattttcataagttctccaatatagcttataaaaaca 39980736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 246 - 515
Target Start/End: Complemental strand, 20880624 - 20880347
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||||||||||||||||  |||||||||  | | ||| ||||  ||||| | |||||| |||||||||||| |||||||||||| |||    
T  20880624 ttggattggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagctttttt 20880525  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaacattt---------tactagaacagtttaacgttattttaccttttgctataaaagtaac 436  Q
     | ||||||||||||||||||||||| |||| | |||||||| ||         ||| | |||| |||||| || ||||| | |||||||||||| || |    
T  20880524 gagcttattttcataagttctccaatatagcttttaaaaacagtttatagcatatacaaaaacaatttaac-ttgttttatcatttgctataaaaatagc 20880426  T
Q  437 atatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
     |||| ||||||||| || ||  ||||| ||||||| | ||| ||| ||||||||||||||||  || |||||||||||    
T  20880425 ttatgtaagcttatacataagcacttattatgataaccgcttgtgctataaactgcaaataagttgtctatccaaacag 20880347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 258 - 387
Target Start/End: Complemental strand, 30444029 - 30443900
Alignment:
Q  258 atttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttc 357  Q
    |||||||||||||||||  ||||| ||| || | |||||||| |||| ||| |||||| |||||||||||| ||||| |||||| ||||| |||||||||    
T  30444029 atttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttc 30443930  T
Q  358 ataagttctccaatgtagcctataaaaaca 387  Q
    |||||||||||||| |||  ||||||||||    
T  30443929 ataagttctccaatatagtttataaaaaca 30443900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 255 - 371
Target Start/End: Original strand, 13715503 - 13715619
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    ||||||||| ||||||||||| |||| ||||||| | |||||||| ||||||||   |||| |||||||||||| |||||||||| | ||||||||||||    
T  13715503 cttatttgatcttatctactagcatatgttttgtgagactgtttggtagaacttcctaaaacagcttatgacaactttcataagcatttttcaacttatt 13715602  T
Q  355 ttcataagttctccaat 371  Q
    |||||||||| ||||||    
T  13715603 ttcataagttgtccaat 13715619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 9832682 - 9832797
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    ||||||||||||||||||| || | ||||||||||||| ||||||||||  |||||||||||||| |||||||| |   |||||||| ||| ||||||||    
T  9832682 ttgacttatttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagcttatgccttttttcataaacttttttcaact 9832781  T
Q  351 tattttcataagttct 366  Q
    ||| || |||||||||    
T  9832782 tatatttataagttct 9832797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 361
Target Start/End: Original strand, 31365119 - 31365225
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||||||||||| |  |||||||||||| | ||||||||  ||||||| |||||  |||||||||||| |||||||||||| |||||||| |||    
T  31365119 cttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttcaactcatt 31365218  T
Q  355 ttcataa 361  Q
    |||||||    
T  31365219 ttcataa 31365225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 387
Target Start/End: Complemental strand, 21367815 - 21367674
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||||| |||||||| | ||||||||||||   ||||||||  ||||||| |||||| |||||||||||   |||| |||||  |||    
T  21367815 ttggattggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgtttt 21367716  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    || ||||||||||||||||||||||  |||| ||| ||||||    
T  21367715 cagcttattttcataagttctccaagatagcttatgaaaaca 21367674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 514
Target Start/End: Original strand, 30956708 - 30956825
Alignment:
Q  397 aacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaat 496  Q
    |||| |||||| |||||||| ||||||||||| || || | |||| ||||||||  || | ||||||||||||||||| ||| ||| |||| ||||||||    
T  30956708 aacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgctataagctgcaaat 30956807  T
Q  497 aagccgtttatccaaaca 514  Q
    |||| |||||||||||||    
T  30956808 aagctgtttatccaaaca 30956825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 514
Target Start/End: Original strand, 30972520 - 30972637
Alignment:
Q  397 aacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaat 496  Q
    |||| |||||| |||||||| ||||||||||| || || | |||| ||||||||  || | ||||||||||||||||| ||| ||| |||| ||||||||    
T  30972520 aacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgctataagctgcaaat 30972619  T
Q  497 aagccgtttatccaaaca 514  Q
    |||| |||||||||||||    
T  30972620 aagctgtttatccaaaca 30972637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 255 - 359
Target Start/End: Complemental strand, 26878339 - 26878235
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||| ||||||||||||| |||||||||  || ||||||||||| ||||||| ||||||||||||||||||   ||||||| ||  ||||| ||||||    
T  26878339 cttattcgagcttatctactgacataagttgcgtgaaactgtttgagagaacttgtgaaaatagcttatgacattgttcataaactgttttcagcttatt 26878240  T
Q  355 ttcat 359  Q
    |||||    
T  26878239 ttcat 26878235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 370
Target Start/End: Original strand, 3845498 - 3845608
Alignment:
Q  259 tttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttca 358  Q
    ||||||||||||||||  |||||||||||| | ||||||||||||||| | |||| | || ||||||| | ||| |||| ||| ||||| ||||||||||    
T  3845498 tttgagcttatctactggcataagttttgtgagactgtttgatagaacatctgaagacagattatgac-atttttataatcttttttcagcttattttca 3845596  T
Q  359 taagttctccaa 370  Q
    ||||||||||||    
T  3845597 taagttctccaa 3845608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 267 - 369
Target Start/End: Original strand, 53789406 - 53789506
Alignment:
Q  267 tatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttct 366  Q
    |||||||| ||||||||||||| | |||  |||| |||||||||| ||| |||||||||||  |||||||||||| ||||| |||| |||||||||||||    
T  53789406 tatctactgacataagttttgtgagact--ttgagagaacttttggaaacagcttatgacacttttcataagcttttttcagcttaatttcataagttct 53789503  T
Q  367 cca 369  Q
    |||    
T  53789504 cca 53789506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 387
Target Start/End: Original strand, 402464 - 402605
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||||| |||||||| ||||| |||||||||||||||| || ||||||||  ||||| | |||||| |||||||||||   ||||||||||  |||    
T  402464 ttgggttgacctatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaacagcttatgacattgttcataagctgtttt 402563  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    || |||| ||||| ||||||| |||  |||  ||||||||||    
T  402564 cagcttaatttcacaagttcttcaagatagattataaaaaca 402605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 438 - 515
Target Start/End: Original strand, 31365395 - 31365472
Alignment:
Q  438 tatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||||||||||||| || ||||||||||||||||| ||||| ||| |||| |||||||||||| ||||||||| ||||    
T  31365395 tatgcaagcttatacataagtgcttatcatgataatcacttgtgctataagctgcaaataagctgtttatccacacag 31365472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 253 - 370
Target Start/End: Original strand, 34610735 - 34610852
Alignment:
Q  253 gacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaactta 352  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||||  ||||||| ||||||  ||||||||||   ||||||||    ||||| || |    
T  34610735 gacttatttgagcttatctactgacataagttttgtacaactatttgggagaacttatgaaaactgcttatgacattgttcataagtggttttcagctga 34610834  T
Q  353 ttttcataagttctccaa 370  Q
    ||||||||||||| ||||    
T  34610835 ttttcataagttcgccaa 34610852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 387
Target Start/End: Original strand, 18405763 - 18405894
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaa-cttatt 354  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||  ||||||| |||||| || | | ||||  |||||||| ||| |||||| |||| |    
T  18405763 ttatttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaacagttcacgacacttttcataatctt-tttcaagcttaat 18405861  T
Q  355 ttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||||||||||  |||| ||| ||||||    
T  18405862 ttcataagttctccaagatagcttatgaaaaca 18405894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 47132406 - 47132338
Alignment:
Q  319 cttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||| |||||| |||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||    
T  47132406 cttatgaaaaatttaataagcttttttcaacttattttcataacttctccaatatagcttataaaaaca 47132338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 304 - 387
Target Start/End: Complemental strand, 902014 - 901931
Alignment:
Q  304 aacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||| |||||| |||| || |||  || ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  902014 aacttatgaaaacagctaataacattttccataagcttttttcaacttattttcataagttctccaatatagcttataaaaaca 901931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 35696306 - 35696240
Alignment:
Q  326 caaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaacatttta 392  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||| |||| |||||||||| ||||    
T  35696306 caaatttaataagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaattta 35696240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 46478766 - 46478712
Alignment:
Q  317 agcttatgacaaatttcataagcttatttcaacttattttcataagttctccaat 371  Q
    |||||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  46478766 agcttatgacagttttcataagcttttttcaacttattttcataagttctccaat 46478712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 387
Target Start/End: Complemental strand, 49556942 - 49556865
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||| |  |||| ||||| | |||||||||||||||    
T  49556942 tgaaaacagcttatgacaattttcataagcttttttcaacttatttcctcaagtcctccagtatagcctataaaaaca 49556865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 371
Target Start/End: Original strand, 31365240 - 31365356
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||| ||||||| |  ||||| |||||| | ||||||||  ||||||| |||| | |||||||||||| ||||||||   | |||||||| |||    
T  31365240 cttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgacaattttcataaatctttttcaactcatt 31365339  T
Q  355 ttcataagttctccaat 371  Q
    ||||||| |||||||||    
T  31365340 ttcataaattctccaat 31365356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 363
Target Start/End: Complemental strand, 37689368 - 37689261
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    ||||||||||||||| |||| | ||| ||| ||| | ||||| ||  |||||||  ||||| |||||||||||| ||||| |||||| ||||||||||||    
T  37689368 cttatttgagcttatttactgaaataggttctgtgatactgtatgggagaacttaagaaaacagcttatgacaattttca-aagcttttttcaacttatt 37689270  T
Q  355 ttcataagt 363  Q
    |||||||||    
T  37689269 ttcataagt 37689261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 513
Target Start/End: Original strand, 1508704 - 1508779
Alignment:
Q  438 tatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaac 513  Q
    |||||||||||||| || || |||||||||||||||||||| ||| ||||  ||||||||||| |||| |||||||    
T  1508704 tatgcaagcttatacataagcgcttatcatgataagcacttgtgctataagttgcaaataagctgtttttccaaac 1508779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 371
Target Start/End: Complemental strand, 4401142 - 4401067
Alignment:
Q  296 tttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaat 371  Q
    |||| ||||| ||| ||||| |||||||||||| || ||||||||  ||| |||||||||||||||||||||||||    
T  4401142 tttggtagaattttggaaaacagcttatgacaatttccataagctgtttttaacttattttcataagttctccaat 4401067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 395 - 473
Target Start/End: Original strand, 29520559 - 29520636
Alignment:
Q  395 agaacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataag 473  Q
    |||||| ||||||||||||||  |||||||||||||| || | |||||||||||||| || ||||||||| ||||||||    
T  29520559 agaacaatttaacgttattttctcttttgctataaaa-tagcttatgcaagcttatacataagtgcttattatgataag 29520636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 51929279 - 51929397
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||||||||||||| ||||| ||||  |||||||||||| | ||| ||||| |||| || |||||| || ||||||||| ||||||| |||| |||    
T  51929279 ttggattgacttatttgaccttatttactggcataagttttgtgatactatttgagagaatttctgaaaacagattatgacaattttcataggctttttt 51929378  T
Q  346 caacttattttcataagtt 364  Q
    || || | | |||||||||    
T  51929379 catctcactatcataagtt 51929397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 366
Target Start/End: Complemental strand, 584194 - 584074
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||||||||||||||||||||||||| |||||||| ||| | |||||||   |||| || |||||| |||||| | ||  ||||||| | || |||    
T  584194 ttggattgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagcttacggcagttttcataggtttcttt 584095  T
Q  346 caacttattttcataagttct 366  Q
     | |||| |||||||||||||    
T  584094 aagcttaatttcataagttct 584074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 368
Target Start/End: Complemental strand, 19983888 - 19983801
Alignment:
Q  280 aagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctcc 368  Q
    ||||||| | ||||||||| |  |||| | |||||||| ||||||| |  |||||||||||| ||||||||||||||||||||||||||    
T  19983888 aagttttatgaaactgtttaagggaacatatgaaaataacttatgagatttttcataagctt-tttcaacttattttcataagttctcc 19983801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 34235020 - 34235096
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||||||||| ||||||||||||||||||||||||||    || |||||| ||||||| |||| | |||||||||||    
T  34235020 ttgacttattcgagcttatctactaacataagttttgcgtgaccgtttgagagaacttatgaatacagcttatgaca 34235096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 387
Target Start/End: Original strand, 36631030 - 36631114
Alignment:
Q  303 gaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| |||||  |||||||||| | ||||| |||||| ||||  ||||||||||||||||||||||| ||||  |||||||||    
T  36631030 gaacttatgaaaccagcttatgacgattttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaaca 36631114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 497
Target Start/End: Original strand, 12862342 - 12862429
Alignment:
Q  410 tattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaata 497  Q
    ||||||| |||||||||||||| ||   |||||||||||| | || |||||||||||| |||||| ||| ||| |||| |||||||||    
T  12862342 tattttatcttttgctataaaaatagattatgcaagcttaaacataagtgcttatcattataagcgcttttgctataacctgcaaata 12862429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 515
Target Start/End: Complemental strand, 31403309 - 31403238
Alignment:
Q  444 agcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||||||| || ||||||||| |||||||||||||  || | ||||||||||||| | ||||||||||||||    
T  31403309 agcttatatataagtgcttatgatgataagcacttgggctagaaactgcaaataacctgtttatccaaacag 31403238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 473
Target Start/End: Complemental strand, 5331283 - 5331206
Alignment:
Q  395 agaacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataag 473  Q
    |||||| ||||||||||||||  |||||||||||||| || | |||||||||||||| || ||||||||| || |||||    
T  5331283 agaacaatttaacgttattttctcttttgctataaaa-tagcttatgcaagcttatacataagtgcttattatcataag 5331206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 387
Target Start/End: Complemental strand, 22203566 - 22203437
Alignment:
Q  257 tatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatttt 356  Q
    |||| ||||||||||||  |||| | |||||| | ||||||||  ||||||| |||||| |||||||||||  || | |||||||| | ||  |||||||    
T  22203566 tattcgagcttatctaccgacattaattttgtgagactgtttgg-agaacttatgaaaacagcttatgacattttacttaagcttaatgcagtttatttt 22203468  T
Q  357 cataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||||||||  |||| ||| ||||||    
T  22203467 cataagttctccaagatagcttatgaaaaca 22203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 365
Target Start/End: Complemental strand, 944652 - 944591
Alignment:
Q  304 aacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttc 365  Q
    ||||| ||||||||||||||||||| || ||||| ||| |||||||||| ||||||| ||||    
T  944652 aacttatgaaaatagcttatgacaatttccataatcttttttcaacttactttcatatgttc 944591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 5448583 - 5448542
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgt 296  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  5448583 cttatttgagcttatctactgacataagttttgtaagactgt 5448542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 387
Target Start/End: Original strand, 24085260 - 24085401
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||||||||||||||   |||||||||||| | |||| ||   ||||||| |||||| ||||||||  |   |||||| |||  |||    
T  24085260 ttggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatggtactgttcatacgctgtttt 24085359  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    || |||||||||| |||||||||||  |||| || |||||||    
T  24085360 cagcttattttcacaagttctccaagatagcttacaaaaaca 24085401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 25447167 - 25447220
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttg 299  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| | ||||||||    
T  25447167 ttggattgacttatttgagtttatctactgacataagttttgtgagactgtttg 25447220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 515
Target Start/End: Original strand, 46886830 - 46886887
Alignment:
Q  458 tgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||| |||||||||||||||| ||| |||| |||||||||||  ||||||||||||||    
T  46886830 tgctaatcatgataagcacttatgctataagctgcaaataagttgtttatccaaacag 46886887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 366
Target Start/End: Complemental strand, 38902201 - 38902094
Alignment:
Q  258 atttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttc 357  Q
    |||||||||||||||||  |||||||||||  ||||||||||  |||| || |||||| ||| |||||||   |||||| | |  |||||||||||||||    
T  38902201 atttgagcttatctactggcataagttttg-caaactgtttggaagaatttatgaaaacagcatatgacattgttcatacgttgttttcaacttattttc 38902103  T
Q  358 ataagttct 366  Q
    || ||||||    
T  38902102 atgagttct 38902094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 20170636 - 20170699
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttt 309  Q
    |||| ||| |||||||||||||||||| | |||||||||| || | |||||||| |||||||||    
T  20170636 ttggattggcttatttgagcttatctagtgacataagtttagtgagactgtttgttagaacttt 20170699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 46031129 - 46031014
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||| ||||||| |   ||||||||| | | ||||||| | |||||||  ||||| ||| |||||||   ||||||||||  ||||| ||||||    
T  46031129 cttatttgagtttatctattgttataagttttatgagactgtttcagagaacttacgaaaacagcctatgacattattcataagctgttttcagcttatt 46031030  T
Q  355 ttcataagttctccaa 370  Q
    || |||||||||||||    
T  46031029 ttaataagttctccaa 46031014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 46778122 - 46778236
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    ||||||||||||||| || |  ||||| |||||| |||| |||||  ||||||| |||||| | |||||||||  ||||||||| ||  |||| |||| |    
T  46778122 cttatttgagcttatttagtggcataaattttgtgaaaccgtttgggagaacttatgaaaacaacttatgacatttttcataagttttgttcagctta-t 46778220  T
Q  355 ttcataagttctccaa 370  Q
    |||||||||| |||||    
T  46778221 ttcataagttgtccaa 46778236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 16072963 - 16073005
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgt 288  Q
    |||| |||||||||||||||||||||| | |||||||||||||    
T  16072963 ttggattgacttatttgagcttatctaatgacataagttttgt 16073005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 20170511 - 20170409
Alignment:
Q  397 aacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaat 496  Q
    |||| |||||| |||||||| |||||||  ||||| || | | |||||||| ||| || || ||||||||||| ||||| || ||  |||||||||||||    
T  20170511 aacaatttaacattattttatcttttgcagtaaaaatagcttgtgcaagctgatacataagcgcttatcatgaaaagcagttgtgatataaactgcaaat 20170412  T
Q  497 aag 499  Q
    |||    
T  20170411 aag 20170409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 26911669 - 26911619
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcata 360  Q
    |||||| |||||||||||| ||||||||| || ||||||||||||| ||||    
T  26911669 tgaaaacagcttatgacaattttcataagtttttttcaacttatttccata 26911619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 387
Target Start/End: Complemental strand, 32582885 - 32582751
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||||||||||| |||||||||| ||||||||||   | ||||||||  ||||||  |||||| ||    |||||   |||| ||| || |||    
T  32582885 ttggattgacttatttgagtttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacattgttcaaaagatttttt 32582793  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||||||| ||||||||||||||  |||| ||| ||||||    
T  32582792 caacttatttccataagttctccaaaatagcttatgaaaaca 32582751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 512
Target Start/End: Complemental strand, 39442375 - 39442321
Alignment:
Q  458 tgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaa 512  Q
    |||||||||| ||||||||||  || |||| |||||||||||| |||||||||||    
T  39442375 tgcttatcataataagcacttaagccataagctgcaaataagctgtttatccaaa 39442321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 46478815 - 46478773
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgt 288  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||    
T  46478815 ttggattgacttatttgagcatatctactaacgtaagttttgt 46478773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 50211875 - 50211813
Alignment:
Q  254 acttatttgagcttatctactaacataag-ttttgtaaaactgtttgatagaacttttgaaaa 315  Q
    |||||||| ||||||||||||||||||||   |||||| ||||||||| ||||||| ||||||    
T  50211875 acttattttagcttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaa 50211813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 367
Target Start/End: Complemental strand, 20170587 - 20170550
Alignment:
Q  330 tttcataagcttatttcaacttattttcataagttctc 367  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  20170587 tttcataagcttttttcaacttattttcattagttctc 20170550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 507
Target Start/End: Complemental strand, 23816002 - 23815941
Alignment:
Q  446 cttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttat 507  Q
    |||||| || |||||||||||||||||||||||  || ||||  ||||||||||| ||||||    
T  23816002 cttatacataagtgcttatcatgataagcactttggctataagatgcaaataagcagtttat 23815941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 33405114 - 33405155
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttg 287  Q
    |||| |||||||||||||| ||||||||| ||||||||||||    
T  33405114 ttggattgacttatttgagtttatctactgacataagttttg 33405155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 37795743 - 37795690
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttg 299  Q
    |||| ||||||||||| |||||||| ||| |||||||| |||||| ||||||||    
T  37795743 ttggattgacttatttaagcttatccactgacataagtcttgtaagactgtttg 37795690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 42747704 - 42747773
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaa 315  Q
    ||||||||||||||||||| |||||||||  ||||||| |||| | |||||||   ||||||| ||||||    
T  42747704 ttggtttgacttatttgagtttatctacttccataagtattgtgagactgtttttgagaacttatgaaaa 42747773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 356
Target Start/End: Original strand, 53762326 - 53762426
Alignment:
Q  256 ttatttgagcttatctactaacataagt-tttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||||||||||||| ||||| |   ||||| |||||| |  |||| ||||||||| |||||||||| |  ||||||||||  ||||||||||||    
T  53762326 ttatttgagcttatctactagcataaatgcctgtaagactgttagggagaaattttgaaaacagcttatgac-atgttcataagctgttttcaacttatt 53762424  T
Q  355 tt 356  Q
    ||    
T  53762425 tt 53762426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 515
Target Start/End: Original strand, 53789564 - 53789661
Alignment:
Q  418 cttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    ||||| ||||| || || | |||| ||||||| | || ||||||||||||||||||| ||| ||  |||| |||||| |||| |||||| ||||||||    
T  53789564 cttttcctatagaaatagcttatgtaagcttacacataagtgcttatcatgataagcgcttgtggcataagctgcaattaagtcgtttacccaaacag 53789661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 7301403 - 7301363
Alignment:
Q  330 tttcataagcttatttcaacttattttcataagttctccaa 370  Q
    |||||||| ||| |||||||||||||||| |||||||||||    
T  7301403 tttcataaacttttttcaacttattttcacaagttctccaa 7301363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 7814226 - 7814319
Alignment:
Q  402 tttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataag 499  Q
    ||||||||||||||   ||||||||||||| || | |||    ||||||| || ||||||||| ||||||||||||| | | |||| |||||||||||    
T  7814226 tttaacgttattttctattttgctataaaaatagcttat----gcttataaataagtgcttattatgataagcacttatactataagctgcaaataag 7814319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 26911739 - 26911699
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagtttt 286  Q
    |||| |||||||||||||| ||||||||| |||||||||||    
T  26911739 ttggattgacttatttgagtttatctactgacataagtttt 26911699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 31403502 - 31403470
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagt 283  Q
    |||||||| ||||||||||||||||||||||||    
T  31403502 ttgacttacttgagcttatctactaacataagt 31403470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 35574862 - 35574913
Alignment:
Q  318 gcttatgacaaatttcataagcttatttcaacttattttcataagttctccaa 370  Q
    ||||||||||| ||||||||| || ||||  ||||||||||||||||||||||    
T  35574862 gcttatgacaattttcataagttt-tttctgcttattttcataagttctccaa 35574913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 514
Target Start/End: Original strand, 35959543 - 35959655
Alignment:
Q  402 tttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagcc 501  Q
    |||||| |||||||| | ||| ||||| || || | ||||  |||||||| || ||  ||||||||||||||  ||| ||  |||| ||||||||||||     
T  35959543 tttaactttattttatccttttctatagaaatagcttatgtgagcttatacataagctcttatcatgataagagcttgtgatataagctgcaaataagct 35959642  T
Q  502 gtttatccaaaca 514  Q
    |||||||||||||    
T  35959643 gtttatccaaaca 35959655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 246 - 371
Target Start/End: Complemental strand, 15305822 - 15305697
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||||||||||||| | ||||||||||||| |||||||||| |||||||||||| || | |||||| ||| ||||||||| || |||    
T  15305822 ttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatggcaattttcataagttttttt 15305723  T
Q  346 caacttattttcataagttctccaat 371  Q
    ||||||||||||||||||||||||||    
T  15305722 caacttattttcataagttctccaat 15305697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 254 - 487
Target Start/End: Complemental strand, 26202168 - 26201926
Alignment:
Q  254 acttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttat 353  Q
    |||||||||| ||||||| || ||||||||||||| | | | |||| ||||| || ||| || | |||||||||| |||||||||||| |||||||||||    
T  26202168 acttatttgaacttatctgctgacataagttttgtgagattctttgctagaatttatgagaacaacttatgacaattttcataagcttttttcaacttat 26202069  T
Q  354 tttcataagttctccaatgtagcctataaaaacattt--------tactagaacagtttaacgttattttacct-tttgctataaaagtaacatatgcaa 444  Q
    |||||||||||||||||| || | ||||||||||  |        ||| ||| || ||||||||||||||| || |||||||||||| || | |||||||    
T  26202068 tttcataagttctccaatatatcttataaaaacaacttatagcagtacgagaccaatttaacgttattttatctctttgctataaaaatagcttatgcaa 26201969  T
Q  445 gcttatagatgagtgcttatcatgataagcacttctgcaataa 487  Q
    ||||||| || || |||||||||||||||| ||| ||| ||||    
T  26201968 gcttatatataagggcttatcatgataagcgcttgtgctataa 26201926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 263 - 515
Target Start/End: Original strand, 43279466 - 43279729
Alignment:
Q  263 agcttatctactaacataagttttgtaaaactgtttg--atagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcata 360  Q
    ||||||||||||| |||||||||||| | ||||||||  | |||| || |||||| |||||||||||| |||||||||||| |||||||||||||||| |    
T  43279466 agcttatctactagcataagttttgtgagactgtttgggagagaatttatgaaaacagcttatgacaattttcataagcttttttcaacttattttcaca 43279565  T
Q  361 agttctccaatgtagcctataaaaacattt-------tactagaacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttataga 453  Q
    ||||||||||| |||| ||||||||||  |       ||| | |||| ||| || |||||||| |||||| ||||||| || | |||||||||||| | |    
T  43279566 agttctccaatatagcttataaaaacaacttatagcatacaaaaacaatttcacattattttatcttttgatataaaaatagcttatgcaagcttagaaa 43279665  T
Q  454 tgagtgcttatcatgataagcacttctgcaat--aaactgcaaataagccgtttatccaaacag 515  Q
    | || ||||| |||||||||  |||  |  ||  ||||||||||||||| ||||||||||||||    
T  43279666 ttagcgcttaacatgataagtgcttgagttataaaaactgcaaataagctgtttatccaaacag 43279729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 243 - 370
Target Start/End: Original strand, 31561661 - 31561788
Alignment:
Q  243 tacttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagctta 342  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||||||||| ||| ||||||   ||||||||| ||     
T  31561661 tacttggattgacttatttgagattatctactaacataagttttgtaaaactgtttgggaaaacttttgaaaacagcatatgacgtttttcataagattg 31561760  T
Q  343 tttcaacttattttcataagttctccaa 370  Q
    ||| | |||| |||||||||||||||||    
T  31561761 tttaagcttactttcataagttctccaa 31561788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 246 - 387
Target Start/End: Complemental strand, 20952503 - 20952362
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||||||||||||||||||| ||||  || ||||||||| | ||| ||| | ||||||| |||||| || ||||| ||| |||||| | ||| |||    
T  20952503 ttggattgacttatttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaactttttt 20952404  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||||||||||||||||||||||| ||||  |||||||||    
T  20952403 caacttattttcataagttctccaatatagctaataaaaaca 20952362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 515
Target Start/End: Original strand, 39659445 - 39659708
Alignment:
Q  260 ttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcat 359  Q
    ||||||||||||||| |||||||||| || |  |||| ||| |||||||  ||||| ||||||||||||||||  ||||||| | ||| ||||| |||||    
T  39659445 ttgagcttatctactgacataagtttcgtgaggctgtctgagagaacttacgaaaacagcttatgacaaattttctaagcttttgtcaccttatcttcat 39659544  T
Q  360 aagttctccaatgtagcctataaaaacatttt---------actagaacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttat 450  Q
    |||||||| ||| |||| ||||||||||  ||         || | |||| |||||||||||| || |||||| ||||||| ||   ||| ||| |||||    
T  39659545 aagttctctaatatagcttataaaaacaagttataacatagacaaaaacaatttaacgttattgtatcttttgttataaaa-tagtgtatccaaacttat 39659643  T
Q  451 agatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    | || || ||||||||||||||||| || |||  ||| |||||||||||  ||||||||||||||    
T  39659644 acataagcgcttatcatgataagcatttgtgctctaagctgcaaataagttgtttatccaaacag 39659708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 302 - 387
Target Start/End: Complemental strand, 32592678 - 32592593
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||| ||||||||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||| | || ||||||||||    
T  32592678 agaacttatgaaaatagcttacgacaattttcataagcttttctcaacttattttcataagttctccaatattgcttataaaaaca 32592593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 246 - 385
Target Start/End: Original strand, 7928220 - 7928360
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttat-gacaaatttcataagcttatt 344  Q
    |||| ||| |||||||||||||||||| | ||||||||| ||| | |||||| || |||||||||||||| ||||||| ||||   |||||||| |  ||    
T  7928220 ttggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttatggacattgttcataagttgttt 7928319  T
Q  345 tcaacttattttcataagttctccaatgtagcctataaaaa 385  Q
    ||| ||||||||||||||||||||||  |||||| ||||||    
T  7928320 tcagcttattttcataagttctccaagatagcctgtaaaaa 7928360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 387
Target Start/End: Complemental strand, 1626038 - 1625907
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    |||||||||||||||  || ||||||||||||||| ||| ||||| ||||||| ||||| |||||||||||||  |||||||| |  ||||| || ||||    
T  1626038 ttatttgagcttatcccctgacataagttttgtaagactatttgagagaacttatgaaagtagcttatgacaatgttcataagatgttttcagctgattt 1625939  T
Q  356 tcataagttctccaatgtagcctataaaaaca 387  Q
    || ||||||||||||  |||| ||| ||||||    
T  1625938 tcgtaagttctccaagatagcttatgaaaaca 1625907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 276 - 371
Target Start/End: Complemental strand, 12289915 - 12289820
Alignment:
Q  276 acataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaat 371  Q
    |||||||||| |||| ||||||||  |||||| || |||| || |||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  12289915 acataagtttcgtaatactgtttgggagaactattaaaaacagtttatgacaatattcataagcttttttcaacttattttcataagttctccaat 12289820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 263 - 387
Target Start/End: Complemental strand, 18066259 - 18066135
Alignment:
Q  263 agcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataag 362  Q
    |||||||||||| ||||||||||||| |||||||||  || ||||| |||||| |||||||||||    |||||||||  ||||| ||||||||| ||||    
T  18066259 agcttatctactgacataagttttgtgaaactgttttgtacaacttatgaaaacagcttatgacattgctcataagctattttcaccttattttcttaag 18066160  T
Q  363 ttctccaatgtagcctataaaaaca 387  Q
    ||||||||  |||| ||| ||||||    
T  18066159 ttctccaagatagcttatgaaaaca 18066135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 341
Target Start/End: Complemental strand, 30331899 - 30331804
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagctt 341  Q
    |||| ||||||||||| |||||||||||| ||||||||||||| | ||||||||  ||||||| |||||| | |||||||||| ||||| ||||||    
T  30331899 ttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttcacaagctt 30331804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 364
Target Start/End: Complemental strand, 449987 - 449877
Alignment:
Q  254 acttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttat 353  Q
    |||||||||||||||||||||| |||||||||| | | | ||||||  || ||||||||||| |||||||||||  |||||||||||  ||| ||||||     
T  449987 acttatttgagcttatctactagcataagttttatgagattgtttgggaggacttttgaaaacagcttatgacatttttcataagctatttttaacttaa 449888  T
Q  354 tttcataagtt 364  Q
    ||| |||||||    
T  449887 tttgataagtt 449877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 370
Target Start/End: Original strand, 33319738 - 33319858
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||||||||| ||||||  |||||||| ||  | ||||||||  |||||||||  |||||||||||||||  ||| |||||||| |||    
T  33319738 ttggattggcttatttgagcttgtctactggcataagttgtg--agactgtttgggagaacttttataaatagcttatgaca--tttaataagctttttt 33319833  T
Q  346 caacttattttcataagttctccaa 370  Q
    || ||||||||||||||||||||||    
T  33319834 cagcttattttcataagttctccaa 33319858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 515
Target Start/End: Complemental strand, 41407289 - 41407171
Alignment:
Q  397 aacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaat 496  Q
    |||| |||||| |||||||| |||||| || | || || | |||| ||||||||| || ||||||||||||||||||| ||| ||| |||| |||||||     
T  41407289 aacaatttaactttattttatcttttggtacagaaatagcttatgtaagcttatacataagtgcttatcatgataagcgcttgtgctataagctgcaaac 41407190  T
Q  497 aagccgtttatccaaacag 515  Q
    |||| ||||||||||||||    
T  41407189 aagctgtttatccaaacag 41407171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 367
Target Start/End: Complemental strand, 2416456 - 2416340
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| |||  ||||||| | |||| ||||| || ||   |||| ||||| |||||| |     
T  2416456 ttgacttatttgagtttatctactaacataagttttgtgaaactgcttggaagaacttattaaaacagcttttgtcattgttcacaagctaatttcagca 2416357  T
Q  351 tattttcataagttctc 367  Q
    || ||||||||||||||    
T  2416356 tactttcataagttctc 2416340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 370
Target Start/End: Complemental strand, 4607073 - 4606949
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||||||||||||||| || ||||||||||| | ||| ||||  ||||||| |||||| | |||||||||   ||||| ||||  |||    
T  4607073 ttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatgagctgcttt 4606974  T
Q  346 caacttattttcataagttctccaa 370  Q
     | ||||||||||||||||||||||    
T  4606973 tagcttattttcataagttctccaa 4606949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 371
Target Start/End: Complemental strand, 12195071 - 12194975
Alignment:
Q  276 acataagttttgtaaaactgtttgatagaacttttgaaaatagctt-atgacaaatttcataagcttatttcaacttattttcataagttctccaat 371  Q
    |||||||||| || | ||||||||  |||||| || |||| ||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||||    
T  12195071 acataagtttcgtcatactgtttgggagaactattaaaaacagctttatgacaattttcataagcttttttcaacttattttcacaagttctccaat 12194975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 370
Target Start/End: Original strand, 12464395 - 12464519
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||||||| ||||||||||  |||||||||||||||||||||| | | ||||||  | | |||   |||| |||||| |||| |||||| |||||| |||    
T  12464395 ttggtttggcttatttgagtgtatctactaacataagttttgtgagaatgtttgggacatcttacaaaaaaagcttacgacatatttcacaagctttttt 12464494  T
Q  346 caacttattttcataagttctccaa 370  Q
    || |||||||||| |||||||||||    
T  12464495 cagcttattttcacaagttctccaa 12464519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 1633691 - 1633746
Alignment:
Q  460 cttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||    
T  1633691 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 1633746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 15757590 - 15757701
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    |||||||||||||| ||||  |||||||||||| | |||| |||  |||| || ||||||  ||||||||||| ||||| |||||| ||||| |||||||    
T  15757590 ttatttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttatgacaattttcagaagcttttttcagcttattt 15757689  T
Q  356 tcataagttctc 367  Q
    ||||| ||||||    
T  15757690 tcatacgttctc 15757701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 367
Target Start/End: Original strand, 40682314 - 40682438
Alignment:
Q  246 ttggtttgacttatttgagcttatctacta---acataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagctta 342  Q
    |||| ||| |||||||||| || |||||||   ||||||||||||| | | ||||||  ||||||| | ||||||||||||||||   |||||||| |      
T  40682314 ttggattggcttatttgagtttgtctactactgacataagttttgtgagattgtttgggagaacttgttaaaatagcttatgacattgttcataagttgt 40682413  T
Q  343 tttcaacttattttcataagttctc 367  Q
    |||||||||||||||||||||||||    
T  40682414 tttcaacttattttcataagttctc 40682438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 456 - 513
Target Start/End: Complemental strand, 12795721 - 12795664
Alignment:
Q  456 agtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaac 513  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||    
T  12795721 agtgcttatcatgataagcacttatgctataaactgcaaataaactgtttatccaaac 12795664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 381
Target Start/End: Complemental strand, 20926616 - 20926516
Alignment:
Q  280 aagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagccta 379  Q
    ||||||||| | ||| ||| | ||||||| ||||| ||| ||||||||| |||||| ||||| ||||||||||||||||||||||||| ||| |||| ||    
T  20926616 aagttttgttagactatttaagagaacttatgaaa-tagtttatgacaattttcattagcttttttcaacttattttcataagttctctaatatagctta 20926518  T
Q  380 ta 381  Q
    ||    
T  20926517 ta 20926516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 355
Target Start/End: Original strand, 41812014 - 41812123
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||||||||||||| |   || |||||| || |  |||||||  |||||||||||||| |||||||||||  |||||||||||| |||    
T  41812014 ttggattggcttatttgagcttatctgcagtcaaaagtttagtgaggctgtttgggagaacttttgaaaacagcttatgacatttttcataagctttttt 41812113  T
Q  346 caacttattt 355  Q
    ||||||||||    
T  41812114 caacttattt 41812123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 367
Target Start/End: Complemental strand, 45229647 - 45229538
Alignment:
Q  258 atttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttc 357  Q
    |||||||||||||||||  |||||||| ||  | || |||||  ||||||| |||||| | |||||||||  |||||| ||||| ||||| |||||||||    
T  45229647 atttgagcttatctactggcataagttatgccacaccgtttgggagaacttatgaaaagaccttatgacatttttcattagcttttttcagcttattttc 45229548  T
Q  358 ataagttctc 367  Q
    ||||||||||    
T  45229547 ataagttctc 45229538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 253 - 392
Target Start/End: Complemental strand, 24101069 - 24100929
Alignment:
Q  253 gacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagc-ttatttcaactt 351  Q
    ||||||||||| ||||| || || |||||||||||| | ||||||||  ||||||| || ||| | ||||||||||  ||||||||| || |||| ||||    
T  24101069 gacttatttgaacttatatattatcataagttttgtgagactgtttgggagaacttatggaaacaccttatgacaatattcataagctttttttctactt 24100970  T
Q  352 attttcataagttctccaatgtagcctataaaaacatttta 392  Q
     |||| ||||||||| |||| |||| ||| |||||| ||||    
T  24100969 gtttttataagttcttcaatatagcttattaaaacaattta 24100929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 33981262 - 33981146
Alignment:
Q  255 cttatttgagcttatctactaacataagtt-ttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttat 353  Q
    |||||||||||||| |||||| | ||||   |||| | ||||| ||| | ||||| ||||||  |||||||||| ||||||||||||| ||||||||||     
T  33981262 cttatttgagcttacctactagcttaagcacttgtgagactgtctgaaaaaacttatgaaaacggcttatgacacatttcataagcttttttcaacttaa 33981163  T
Q  354 tttcataagttctccaa 370  Q
    |||||||| ||||||||    
T  33981162 tttcataaattctccaa 33981146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 7043659 - 7043733
Alignment:
Q  253 gacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    ||||| || |||||||| |||| ||||||||||||| | ||||||||| ||||||| |||||||| |||||||||    
T  7043659 gacttgttggagcttatatacttacataagttttgtgatactgtttgaaagaacttatgaaaataacttatgaca 7043733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 453 - 511
Target Start/End: Original strand, 10619343 - 10619401
Alignment:
Q  453 atgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaa 511  Q
    ||||| |||||||||||||||||||||| | ||||||| ||||||||| ||||||||||    
T  10619343 atgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 10619401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 310 - 371
Target Start/End: Original strand, 11201367 - 11201429
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaactta-ttttcataagttctccaat 371  Q
    ||||||||| ||||||||| |||||||||||| |||||||| | |||||||||||||||||||    
T  11201367 tgaaaatagtttatgacaactttcataagcttttttcaactcatttttcataagttctccaat 11201429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 18179097 - 18179055
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgt 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  18179097 ttggattgacttatttgagcttatctactaacataagttttgt 18179055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 27317527 - 27317449
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatg 324  Q
    |||| |||||||||||||||||||||||  ||||||||||| | | ||||||||| ||||||| |||||| | ||||||    
T  27317527 ttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 370
Target Start/End: Original strand, 7035496 - 7035613
Alignment:
Q  253 gacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaactta 352  Q
    ||||| ||||| ||||| | |||||||||||||||| | |||||||   ||||||| || ||| ||||||||||| | |||||||| |  ||||  ||||    
T  7035496 gacttgtttgatcttatatgctaacataagttttgtgagactgttttgaagaacttatggaaacagcttatgacacagttcataaggtgttttccgctta 7035595  T
Q  353 ttttcataagttctccaa 370  Q
    |||||||||||| |||||    
T  7035596 ttttcataagttttccaa 7035613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 31744446 - 31744365
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||| ||| |||||||| ||||||||||  ||||||||||| | | ||||||||| |||||||||||||| |||||| ||||    
T  31744446 ttggattggcttatttgggcttatctaccgacataagttttctgagactgtttgagagaacttttgaaaacagcttaagaca 31744365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 383
Target Start/End: Complemental strand, 36125445 - 36125372
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaa 383  Q
    |||||| |||||||  ||| |||| ||||||| ||| ||||||||||||||||||||||||| |||| ||||||    
T  36125445 tgaaaacagcttattgcaattttcgtaagctttttttaacttattttcataagttctccaatttagcttataaa 36125372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 327
Target Start/End: Original strand, 42659133 - 42659214
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||| ||| ||||||||||||||| ||||  |||||||||||| | ||||||||  |||| ||||||||| |||||||||||    
T  42659133 ttgggttggcttatttgagcttatttactggcataagttttgtgagactgtttgggagaagttttgaaaacagcttatgaca 42659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 367
Target Start/End: Complemental strand, 13325709 - 13325597
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||||||||| | | | ||||||||| | | | |||| |  |||||||||||||| |||||||||||  |  ||||||||| ||||| || |||    
T  13325709 cttatttgagcttatcaattgatataagttttatgagattgttcgggagaacttttgaaaacagcttatgacatttcacataagcttttttcagctcatt 13325610  T
Q  355 ttcataagttctc 367  Q
    |||||||||||||    
T  13325609 ttcataagttctc 13325597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 1875210 - 1875156
Alignment:
Q  253 gacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaact 307  Q
    |||||||||||| ||||||| ||| | ||||||||| ||||||||||||||||||    
T  1875210 gacttatttgagattatctaataatacaagttttgtgaaactgtttgatagaact 1875156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 368
Target Start/End: Complemental strand, 2142802 - 2142680
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    ||||||||||||||||||| ||||||||   |||||||||| | | ||||||||  ||||||| |||||| |  || ||||||  ||||| ||||  |||    
T  2142802 ttggtttgacttatttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaacaagttgtgacaatgttcattagctgtttt 2142703  T
Q  346 caacttattttcataagttctcc 368  Q
     | ||||||||||||| ||||||    
T  2142702 tagcttattttcataaattctcc 2142680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 7033231 - 7033305
Alignment:
Q  253 gacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    ||||| ||||||||||| |||||||||||||||| | | ||||||| | ||||||| |||||| | |||||||||    
T  7033231 gacttgtttgagcttatatactaacataagttttatgatactgtttaaaagaacttatgaaaacaacttatgaca 7033305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 39073684 - 39073750
Alignment:
Q  319 cttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaa 385  Q
    |||||||||| ||||||||| ||  |||||||||||||||  ||||||||||| |||| ||||||||    
T  39073684 cttatgacaattttcataagtttcgttcaacttattttcactagttctccaatatagcttataaaaa 39073750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 10619142 - 10619279
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||| ||||||| ||||||||| ||| ||||||||| | ||   |||  ||||||  |||||| |||||||| ||| ||||   ||| | |||    
T  10619142 ttggattgactcatttgagtttatctactgacacaagttttgtgagaccccttgggagaactcatgaaaacagcttatgtcaattttctcgagcattttt 10619241  T
Q  346 caacttattttcataagttctccaatgtagcctataaa 383  Q
    || ||||||||||||||| ||||||| |||| ||||||    
T  10619242 cagcttattttcataagtactccaatctagcttataaa 10619279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 42419941 - 42419860
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||| |||||||||||||| |||||| || ||||||||||| | | ||||||||  |||||||  ||||| |||||||||||    
T  42419941 ttggattgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgaca 42419860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 15757810 - 15757866
Alignment:
Q  459 gcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||||||||||||||| ||| ||| |||| ||| |||||||| ||||||||||||||    
T  15757810 gcttatcatgataagcgcttgtgctataagctgaaaataagctgtttatccaaacag 15757866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 384
Target Start/End: Original strand, 23956036 - 23956092
Alignment:
Q  328 aatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaa 384  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||  ||| |||||||    
T  23956036 aatttcataagcttttttcaacttattttcataaattcttcaatacagcttataaaa 23956092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 40279458 - 40279414
Alignment:
Q  343 tttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||    
T  40279458 tttcaacttattttcataagttctccaatatagcttatgaaaaca 40279414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 750809 - 750694
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||| |||||| ||  |||| ||||||| | | ||||||  ||||||| |||||| |||| ||||||   ||||||||||  ||| | ||||||    
T  750809 cttatttgagtttatctcctggcatatgttttgtgagagtgtttgcaagaacttatgaaaagagctaatgacattgttcataagctgttttgagcttatt 750710  T
Q  355 ttcataagttctccaa 370  Q
    | ||||||||||||||    
T  750709 tgcataagttctccaa 750694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 5745771 - 5745842
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctata 381  Q
    |||||| |||||||||||| |||||||||||| || ||||| |||||| ||||| ||| ||| |||| ||||    
T  5745771 tgaaaacagcttatgacaattttcataagctttttccaactaattttcctaagtcctcaaatatagcttata 5745842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 36534723 - 36534668
Alignment:
Q  460 cttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    ||||||||||||||||||| ||  |||||||| |||||||  ||||||||||||||    
T  36534723 cttatcatgataagcacttatgttataaactgaaaataagttgtttatccaaacag 36534668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 370
Target Start/End: Complemental strand, 41851670 - 41851559
Alignment:
Q  259 tttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttca 358  Q
    |||||||||||||| | ||| ||||||||| | |||| |||  |||| || || ||| | |||||||||  |||||||||||| | ||| |||| |||||    
T  41851670 tttgagcttatctattgacaaaagttttgtgagactgattgggagaatttatggaaacaacttatgacacttttcataagcttttctcagcttaatttca 41851571  T
Q  359 taagttctccaa 370  Q
    ||| ||||||||    
T  41851570 taaattctccaa 41851559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 499
Target Start/End: Original strand, 5599180 - 5599234
Alignment:
Q  445 gcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataag 499  Q
    ||||||| || ||||||||| ||||||||||||| ||| |||| |||||||||||    
T  5599180 gcttataaataagtgcttattatgataagcacttatgctataagctgcaaataag 5599234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 1633430 - 1633491
Alignment:
Q  254 acttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaa 315  Q
    ||||||||||| |||||||||| |||||||||||| | |||||| |  ||||||| ||||||    
T  1633430 acttatttgagtttatctactagcataagttttgttatactgttagggagaacttatgaaaa 1633491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 376
Target Start/End: Original strand, 9877958 - 9877991
Alignment:
Q  343 tttcaacttattttcataagttctccaatgtagc 376  Q
    ||||||||||||||||||||||||| ||||||||    
T  9877958 tttcaacttattttcataagttctctaatgtagc 9877991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 40776024 - 40776101
Alignment:
Q  251 ttgacttatttgagcttatctactaacataag-ttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||||||| ||||| |||||||||||||||||   || |||| |||||||  ||||||| |||||| |||||||||||    
T  40776024 ttgacttacttgagtttatctactaacataagcacttataaacctgtttggaagaacttatgaaaacagcttatgaca 40776101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 362
Target Start/End: Complemental strand, 9174955 - 9174847
Alignment:
Q  254 acttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttat 353  Q
    ||||||||||||||||||| |  |||||||| ||| | |||||||||  |  ||| | |||| | |||||||||   ||||||||||  ||||| |||||    
T  9174955 acttatttgagcttatctattggcataagttatgtgagactgtttgagggggcttgttaaaacaacttatgacattgttcataagctattttcagcttat 9174856  T
Q  354 tttcataag 362  Q
    |||||||||    
T  9174855 tttcataag 9174847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 14220763 - 14220807
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttg 299  Q
    ||||||| | |||||||||||||||||||||||| | ||||||||    
T  14220763 cttatttcaccttatctactaacataagttttgtgagactgtttg 14220807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 21828101 - 21828041
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaa 315  Q
    ||||||||| ||||||||||  |||||||||||| | |||||||   ||||||||||||||    
T  21828101 cttatttgaccttatctactggcataagttttgtgagactgtttagaagaacttttgaaaa 21828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 30990361 - 30990397
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataag 282  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  30990361 ttggattggcttatttgagcttatctactaacataag 30990397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 473
Target Start/End: Complemental strand, 32592575 - 32592499
Alignment:
Q  397 aacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataag 473  Q
    |||| |||||| |||||||| ||||| |||||||| ||   |||||||||||||| || || |||||| ||||||||    
T  32592575 aacaatttaacattattttatctttttctataaaaatagtttatgcaagcttatacataagcgcttataatgataag 32592499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 282
Target Start/End: Complemental strand, 43142012 - 43141984
Alignment:
Q  254 acttatttgagcttatctactaacataag 282  Q
    |||||||||||||||||||||||||||||    
T  43142012 acttatttgagcttatctactaacataag 43141984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 371
Target Start/End: Original strand, 35534541 - 35534660
Alignment:
Q  252 tgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaactt 351  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |||||||||||| ||| | |||||| ||||  |||    
T  35534541 tgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaagcttttttcggctt 35534640  T
Q  352 attttcataagttctccaat 371  Q
    | ||||||||||||||||||    
T  35534641 actttcataagttctccaat 35534660  T

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Target: chr8; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 10758184 - 10758297
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    ||||||||||||| ||||||| |||||||||||||||| | |||||||||||||| || |||||| |||||||||||| ||||| |||||| ||||| ||    
T  10758184 ttgacttatttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttatgacaattttcaaaagcttttttcagct 10758283  T
Q  351 tattttcataagtt 364  Q
    | ||||||||||||    
T  10758284 tgttttcataagtt 10758297  T

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Target: chr8; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 239 - 387
Target Start/End: Complemental strand, 12976367 - 12976220
Alignment:
Q  239 ggcatacttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataag 338  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||| ||||| | |||||||  |||||||| ||| || ||||| | |||| ||||| |||    
T  12976367 ggcatgcttggtttggcttatttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagcttctaacaattttcaaaag 12976268  T
Q  339 cttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||| ||||| |||| |||||||||||||| ||| |||| ||||||||||    
T  12976267 cttttttcagctta-tttcataagttctctaatatagcttataaaaaca 12976220  T

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Target: chr8; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 255 - 371
Target Start/End: Original strand, 35643919 - 35644035
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||| |||||||||||  ||||| |||||| | ||||||||  | ||||| ||||||||| ||||||||| |||||||||||| ||||||||||||    
T  35643919 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttatt 35644018  T
Q  355 ttcataagttctccaat 371  Q
    |||||||| ||||||||    
T  35644019 ttcataagctctccaat 35644035  T

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Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 256 - 385
Target Start/End: Complemental strand, 26771403 - 26771274
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    |||| |||||||||||||   |||||||||||| | ||||||||  ||||||| |||||| |||||||||||| ||||| |||| | |||||||||||||    
T  26771403 ttatctgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattt 26771304  T
Q  356 tcataagttctccaatgtagcctataaaaa 385  Q
    |||||||||||| ||| || | ||||||||    
T  26771303 tcataagttctctaatatatcttataaaaa 26771274  T

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Target: chr8; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 1058008 - 1058122
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||||||||||||| ||||||||||||| | ||||||||  ||||||||||||||  ||||||||||  |||||| || || ||||  ||||||    
T  1058008 cttatttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttatgacatttttcattag-ttttttccgcttatt 1058106  T
Q  355 ttcataagttctccaa 370  Q
    ||||||||||||||||    
T  1058107 ttcataagttctccaa 1058122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 255 - 384
Target Start/End: Complemental strand, 18133795 - 18133666
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    ||||||| |||||||||||||  ||||||||||| | ||||||||  ||| ||| |||||  ||||||| |||| ||||| |||||| ||||| ||||||    
T  18133795 cttatttaagcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcagcttatt 18133696  T
Q  355 ttcataagttctccaatgtagcctataaaa 384  Q
    ||||||||||||||||| |||  |||||||    
T  18133695 ttcataagttctccaatatagtttataaaa 18133666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 246 - 371
Target Start/End: Original strand, 43045647 - 43045772
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||| ||||||||||||| |||||| ||||| | |||||||   ||| ||| |||||| ||||||  |||| ||| |||||||| |||    
T  43045647 ttggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagcttacaacaattttaataagctttttt 43045746  T
Q  346 caacttattttcataagttctccaat 371  Q
    ||||||||||||||||||||||||||    
T  43045747 caacttattttcataagttctccaat 43045772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 264 - 387
Target Start/End: Complemental strand, 28763498 - 28763375
Alignment:
Q  264 gcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagc-ttatttcaacttattttcataag 362  Q
    ||||||||| ||||||||||||||| | ||||||||  ||||||| |||||| ||||||| |||| |||||||||| || |||||||||| |||||||||    
T  28763498 gcttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctttttttcaactta-tttcataag 28763400  T
Q  363 ttctccaatgtagcctataaaaaca 387  Q
    |||  |||| |||| ||||||||||    
T  28763399 ttcagcaatatagcttataaaaaca 28763375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 16825516 - 16825578
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttc 365  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  16825516 agaacttatgaaaatagcttatgacaattttcataagctt-tttcaacttattttcataagttc 16825578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 514
Target Start/End: Original strand, 14956377 - 14956494
Alignment:
Q  397 aacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaat 496  Q
    |||| ||||| ||||||| | ||||| | |||||| || | |||||||||||||| || |||||||||||||||||||  || ||| |||| ||||||||    
T  14956377 aacaatttaatgttatttcatcttttacaataaaaatagcttatgcaagcttatacataagtgcttatcatgataagcgattgtgctataagctgcaaat 14956476  T
Q  497 aagccgtttatccaaaca 514  Q
    |||  |||||||||||||    
T  14956477 aagttgtttatccaaaca 14956494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 363
Target Start/End: Original strand, 30251376 - 30251493
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||||||||||||||| |||||||||| || | ||||||||  |||||||  ||||| |||||||  ||  |||||||||||| ||     
T  30251376 ttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcataagcttttta 30251475  T
Q  346 caacttattttcataagt 363  Q
    || |||||||||||||||    
T  30251476 cagcttattttcataagt 30251493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 35749500 - 35749612
Alignment:
Q  254 acttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttat 353  Q
    ||||| ||||||||||||| | ||||||||||||  |  |||||||| ||||||| |||||| ||||| |  ||  |||||||| ||| ||||||| |||    
T  35749500 acttaattgagcttatctattgacataagttttgcgaggctgtttgagagaacttatgaaaacagcttgtagcatttttcataaacttttttcaacatat 35749599  T
Q  354 tttcataagttct 366  Q
    |||||||||||||    
T  35749600 tttcataagttct 35749612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 371
Target Start/End: Complemental strand, 10120858 - 10120779
Alignment:
Q  292 actgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaat 371  Q
    ||||||||| ||||||| |||||| |||||||||||  | ||||| |||  ||||| |||||||||||||||||||||||    
T  10120858 actgtttgagagaacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataagttctccaat 10120779  T

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Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 515
Target Start/End: Original strand, 1058156 - 1058274
Alignment:
Q  397 aacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaat 496  Q
    ||||| ||||| ||||||||   |||||||||||| || | |||| ||||||||| || || |||||||||  ||||| ||| ||| |||| ||||||||    
T  1058156 aacagattaactttattttatgatttgctataaaaatagcttatgtaagcttatacataagcgcttatcatagtaagcgcttgtgctataagctgcaaat 1058255  T
Q  497 aagccgtttatccaaacag 515  Q
    |||| |||||| |||||||    
T  1058256 aagctgtttattcaaacag 1058274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 246 - 356
Target Start/End: Original strand, 36963276 - 36963386
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||||||| |||||||  |||||||||||| | ||||||||  |||||||   |||| ||||| |||||| ||||| |||||| ||     
T  36963276 ttggattggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaacttacaaaaacagcttttgacaattttcaaaagcttttta 36963375  T
Q  346 caacttatttt 356  Q
    |||||||||||    
T  36963376 caacttatttt 36963386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 387
Target Start/End: Complemental strand, 27028971 - 27028838
Alignment:
Q  254 acttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttat 353  Q
    ||||||||||| ||||| |||  ||||||||| || | | ||||||  |||| || |||||| |||||| ||||  |||||||||||  ||||| |||||    
T  27028971 acttatttgagtttatccactggcataagtttagtgagattgtttgggagaaattctgaaaacagcttaggacatttttcataagctattttcagcttat 27028872  T
Q  354 tttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||| |||||||  |||| ||| ||||||    
T  27028871 tttcataagctctccaagatagcttatgaaaaca 27028838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 32840913 - 32841022
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    |||||||| ||||||||||||||| ||| ||||||||  | ||||||||  ||||||| |||||| | |||||||||   |||||||| |  ||||| ||    
T  32840913 ttgacttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatgacattgttcataagttgttttcagct 32841012  T
Q  351 tattttcata 360  Q
    ||||||||||    
T  32841013 tattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 387
Target Start/End: Complemental strand, 37945688 - 37945603
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||| |||||| |||||||||||| || ||||||| | ||| |||||||||||| ||||| | |||| |||| ||||||||||    
T  37945688 agaacttctgaaaacagcttatgacaatttccataagcattttttaacttattttcagaagttgtacaatatagcttataaaaaca 37945603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 387
Target Start/End: Complemental strand, 6525956 - 6525824
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||| |||||||||||||||||||||||   ||||||||  | ||||| |||  |  | ||||||||| |||||||| |||    | |||| ||    
T  6525956 cttatttgagtttatctactaacataagttttgtgtgactgtttgggaaaacttatgatgactgtttatgacaattttcataaactttcaactacttgtt 6525857  T
Q  355 ttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||||||| ||| |||| ||||||||||    
T  6525856 ttcataagttctcaaatatagcttataaaaaca 6525824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 387
Target Start/End: Complemental strand, 38648490 - 38648358
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    ||||||| || ||||||||| ||||||||||||| | ||||||||  ||| ||| |||||| |||| ||||||  | |||||||||| ||| | | || |    
T  38648490 cttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatgacagttctcataagcttttttaagcgtaat 38648391  T
Q  355 ttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||||||||| |||  |||| ||| ||||||    
T  38648390 ttcataagttctacaagatagcttatgaaaaca 38648358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 40859705 - 40859796
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataag 338  Q
    |||| ||| ||||||||||||||||| |||||||||||||||| |  ||||||   || |||| |||||| |||||||||||| |||||||||    
T  40859705 ttggattggcttatttgagcttatctgctaacataagttttgtgaggctgttttggag-acttatgaaaacagcttatgacaattttcataag 40859796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 31716158 - 31716273
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||||||||||| |  ||||  |||| | | |||||||   |||||||||||||| |||||||||||   ||||||||||| ||||| ||||||    
T  31716158 cttatttgagcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatgacattcttcataagcttttttcagcttatt 31716257  T
Q  355 ttcataagttctccaa 370  Q
    |  |||| ||||||||    
T  31716258 tctataacttctccaa 31716273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 38602475 - 38602433
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgt 288  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  38602475 ttggattgacttatttgagcttatctactgacataagttttgt 38602433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 515
Target Start/End: Complemental strand, 40981057 - 40981000
Alignment:
Q  458 tgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    ||||||||| ||||||| ||| ||| |||| |||||||||||| ||||||||||||||    
T  40981057 tgcttatcaagataagcgcttgtgctataagctgcaaataagctgtttatccaaacag 40981000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 41589724 - 41589627
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttat 353  Q
    |||||||||||| |||||| ||||||| ||| | | |||||||   ||||||| |||||| | ||||| |||| ||||| |||||||||| |||||||    
T  41589724 ttatttgagcttgtctactgacataagctttttgagactgttttggagaacttatgaaaacaacttataacaattttcaaaagcttatttgaacttat 41589627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 500
Target Start/End: Complemental strand, 41821501 - 41821444
Alignment:
Q  441 gcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagc 500  Q
    ||||||||||| || ||||||||||||||||||||||| |||  ||| ||||||||||||    
T  41821501 gcaagcttatacataagtgcttatcatgataagcacttgtgc--taagctgcaaataagc 41821444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 514
Target Start/End: Original strand, 2833465 - 2833520
Alignment:
Q  460 cttatcatgataagcacttctgcaataaactgc-aaataagccgtttatccaaaca 514  Q
    ||||||||||||||||||| ||| |||| |||| |||||||| |||||||||||||    
T  2833465 cttatcatgataagcacttatgctataagctgcaaaataagcagtttatccaaaca 2833520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 27695021 - 27694930
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttc 346  Q
    ||||||||| |||||||||| | |||||| ||||   ||| ||| | |||||||||||||| | |||||||||| |||||| ||||| ||||    
T  27695021 cttatttgaacttatctactgatataagtgttgtgtgactatttaaaagaacttttgaaaacatcttatgacaattttcattagcttttttc 27694930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 472
Target Start/End: Complemental strand, 32976040 - 32975973
Alignment:
Q  405 aacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataa 472  Q
    |||||||||||| |||||||||||||| || | |||||||||||||| || ||  |||||||| ||||    
T  32976040 aacgttattttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatcataataa 32975973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 387
Target Start/End: Complemental strand, 1930164 - 1930042
Alignment:
Q  265 cttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagtt 364  Q
    |||||||||| ||||||||||||| | | | ||||  ||||||| |||||| || ||||||||   ||||||||||  ||||| |||||||||| ||| |    
T  1930164 cttatctactgacataagttttgtgacattatttgggagaacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttcacaaggt 1930065  T
Q  365 ctccaatgtagcctataaaaaca 387  Q
    | ||||  |||| ||| ||||||    
T  1930064 caccaagatagcttatgaaaaca 1930042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 9130394 - 9130506
Alignment:
Q  402 tttaacgttattttac---cttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataa 498  Q
    |||||||||||||||    |||| |||| |||| || | ||||| |||||||| || |||| |||||||||| | ||||| ||| |||| ||||||||||    
T  9130394 tttaacgttattttattatctttagctacaaaaatagcttatgcgagcttatacataagtgattatcatgatgaccacttgtgctataagctgcaaataa 9130493  T
Q  499 gccgtttatccaa 511  Q
    ||  |||||||||    
T  9130494 gctatttatccaa 9130506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 308
Target Start/End: Original strand, 12496994 - 12497056
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaactt 308  Q
    |||| |||| |||||||||||||||| ||  |||||||||||| | ||||||||| |||||||    
T  12496994 ttggattgatttatttgagcttatctcctggcataagttttgtgagactgtttgagagaactt 12497056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 515
Target Start/End: Original strand, 29819026 - 29819080
Alignment:
Q  461 ttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||||||||||||| ||| ||| |||| |||||||||||  ||||||||||||||    
T  29819026 ttatcatgataagcccttttgctataagctgcaaataagttgtttatccaaacag 29819080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 388
Target Start/End: Original strand, 30657798 - 30657836
Alignment:
Q  350 ttattttcataagttctccaatgtagcctataaaaacat 388  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  30657798 ttattttcataagttctccaatatagcttataaaaacat 30657836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 34771016 - 34770934
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataag-ttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    ||||||||||||||||||| |||||| ||| ||||||   |||| ||||||||||| ||| | | |||||| |||||||||||    
T  34771016 ttggtttgacttatttgagtttatctgctagcataagcacttgtgaaactgtttgagagatcctatgaaaacagcttatgaca 34770934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 478
Target Start/End: Complemental strand, 38353330 - 38353257
Alignment:
Q  404 taacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcactt 478  Q
    |||| |||||||| ||||||| |||||| || | |||||||||||||| || || | ||||||||||||||||||    
T  38353330 taacattattttatcttttgc-ataaaaatagcttatgcaagcttatacataagcgattatcatgataagcactt 38353257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 499
Target Start/End: Original strand, 40637423 - 40637477
Alignment:
Q  445 gcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataag 499  Q
    ||||||| || ||||||||| ||||||||||||| ||| |||| |||||||||||    
T  40637423 gcttataaataagtgcttattatgataagcacttatgctataagctgcaaataag 40637477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 11376842 - 11376769
Alignment:
Q  255 cttatttgagcttatctactaacataagtt-ttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||||||||||||||||||| | ||||||| |||| | ||| ||||  ||||||| |||||||||||| |||||    
T  11376842 cttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaatagcttgtgaca 11376769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 29818877 - 29818918
Alignment:
Q  257 tatttgagcttatctactaacataagttttgtaaaactgttt 298  Q
    ||||||||||||||||||| |||||||||||| | |||||||    
T  29818877 tatttgagcttatctactatcataagttttgtgagactgttt 29818918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 43717856 - 43717925
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaa 315  Q
    |||| ||| |||||||||||||||||| | ||||||||||||| | ||| ||||  ||||||| ||||||    
T  43717856 ttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaa 43717925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 18331862 - 18331826
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataag 282  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  18331862 ttggattgacttatttgatcttatctactaacataag 18331826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 23775175 - 23775131
Alignment:
Q  343 tttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| ||||||||||||||| ||||||||||| ||| ||||||    
T  23775175 tttcaaattattttcataagttttccaatgtagcttatgaaaaca 23775131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 370
Target Start/End: Complemental strand, 29205943 - 29205832
Alignment:
Q  258 atttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttc 357  Q
    |||||||||||| |||   |||||||| ||| | ||||| ||| ||||||| | |||| ||| |||||||  |||||||||||| ||| ||| || ||||    
T  29205943 atttgagcttatgtacatgcataagttctgtgatactgtctgagagaacttattaaaacagcgtatgacatttttcataagctt-ttttaacctactttc 29205845  T
Q  358 ataagttctccaa 370  Q
    |||| ||||||||    
T  29205844 ataaattctccaa 29205832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 475
Target Start/End: Original strand, 42043441 - 42043505
Alignment:
Q  411 attttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagca 475  Q
    |||||| ||||||||||| || || |||||| ||||||||| || |||||||||| | |||||||    
T  42043441 attttatcttttgctatagaaatagcatatgtaagcttatacataagtgcttatcgtaataagca 42043505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 43368622 - 43368658
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataag 282  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  43368622 ttggattgacttatttgatcttatctactaacataag 43368658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 19302490 - 19302605
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    |||||||||||||||||||||||| ||||||||||||| | | | ||||  |||| || |||||| |||||||||||| |||||||| ||| ||||||||    
T  19302490 ttgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaacttttttcaact 19302589  T
Q  351 tattttcataagttct 366  Q
    ||||||||||||||||    
T  19302590 tattttcataagttct 19302605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 246 - 387
Target Start/End: Original strand, 11619080 - 11619221
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||||||||||||||| ||||||| ||  | |||| | |||  |||| || |||||| | |||||||||| |||||||||||| |||    
T  11619080 ttggattggcttatttgagcttatctactgacataagcttcatgaaacagattgggagaatttatgaaaacaacttatgacaattttcataagctttttt 11619179  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||    
T  11619180 caacttaatttcataagttctccaacgtagcttataaaaaca 11619221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 418 - 515
Target Start/End: Original strand, 21568731 - 21568828
Alignment:
Q  418 cttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||||||||||||| || | |||||||||||||| || ||||||||||||||||||||||| ||| |||| ||||||| |||| ||||||||||||||    
T  21568731 cttttgctataaaaatagcttatgcaagcttatacataagtgcttatcatgataagcacttatgctataagctgcaaacaagctgtttatccaaacag 21568828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 258 - 387
Target Start/End: Complemental strand, 34744164 - 34744035
Alignment:
Q  258 atttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttc 357  Q
    ||||||||||||||||||||||||| ||||| | ||||||||  ||||||  |||||| | |||||||||| ||||| |||||| ||||  ||||||||     
T  34744164 atttgagcttatctactaacataagatttgtgagactgtttggaagaactaatgaaaagaacttatgacaattttcacaagcttttttcgccttattttt 34744065  T
Q  358 ataagttctccaatgtagcctataaaaaca 387  Q
    |||||||||||||| |||| ||| ||||||    
T  34744064 ataagttctccaatatagcttatgaaaaca 34744035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 255 - 366
Target Start/End: Original strand, 3927941 - 3928052
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    ||||||||||  ||||||||| |||||||||||| | ||| ||||| |||| |||| |||| |  ||||||||| |||||||||||| ||||||||||||    
T  3927941 cttatttgaggctatctactagcataagttttgtgagactatttgagagaattttttaaaacaatttatgacaattttcataagcttttttcaacttatt 3928040  T
Q  355 ttcataagttct 366  Q
    ||||||||||||    
T  3928041 ttcataagttct 3928052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 263 - 387
Target Start/End: Original strand, 19022524 - 19022648
Alignment:
Q  263 agcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataag 362  Q
    |||||||||||| |||| |||||||| | | ||||||  |||| || |||||| | |||||||||| ||||||||| |   |||||||||||||||||||    
T  19022524 agcttatctactgacatgagttttgtgagattgtttgggagaatttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataag 19022623  T
Q  363 ttctccaatgtagcctataaaaaca 387  Q
    ||||||||| |||| ||||||||||    
T  19022624 ttctccaatatagcttataaaaaca 19022648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 21568454 - 21568558
Alignment:
Q  283 ttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataa 382  Q
    |||||| | ||||||||  ||||||| |||||| ||||||| |||| |||||||||||  |||||||||| || ||||||||||||||| |||| |||||    
T  21568454 ttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataa 21568553  T
Q  383 aaaca 387  Q
    |||||    
T  21568554 aaaca 21568558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 30570909 - 30570992
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaa 385  Q
    ||||||| |||||| |||||||||||| |||||||||||| |||||  ||| ||||||||||||||||||||||  ||||||||    
T  30570909 agaacttgtgaaaacagcttatgacaattttcataagcttttttcatgttaatttcataagttctccaatgtaggttataaaaa 30570992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 387
Target Start/End: Original strand, 19214359 - 19214469
Alignment:
Q  277 cataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagc 376  Q
    |||||||||||| | | ||||||  ||||||| |||||| |||  ||||||| |||||||| ||| |||||||||||||||||||||||| |||| ||||    
T  19214359 cataagttttgtgagattgtttgggagaacttatgaaaacagcaaatgacaattttcataaacttgtttcaacttattttcataagttctacaatatagc 19214458  T
Q  377 ctataaaaaca 387  Q
     |||| |||||    
T  19214459 ttatacaaaca 19214469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 384
Target Start/End: Original strand, 33601342 - 33601470
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    ||||||||||||||||| |  |||||||||||| | ||| |||   ||||||| |||||| |||||||||||  |||||||||||| ||||| ||||  |    
T  33601342 ttatttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttcagcttaaat 33601441  T
Q  356 tcataagttctccaatgtagcctataaaa 384  Q
    |||||||||||| ||  |||| |||||||    
T  33601442 tcataagttctctaagatagcttataaaa 33601470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 256 - 387
Target Start/End: Complemental strand, 21196406 - 21196276
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    |||||||||||||| ||||| |||||||||||| | |||||||   |||| || || ||| |||| ||||||| ||||||| |||| ||| |||||||||    
T  21196406 ttatttgagcttatatactagcataagttttgtgagactgtttagaagaatttatgcaaacagct-atgacaattttcatatgctttttttaacttattt 21196308  T
Q  356 tcataagttctccaatgtagcctataaaaaca 387  Q
    || |||||||| ||||  ||| ||||||||||    
T  21196307 tcttaagttctgcaataaagcttataaaaaca 21196276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 261 - 364
Target Start/End: Complemental strand, 35056808 - 35056706
Alignment:
Q  261 tgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcata 360  Q
    |||||||||||||||||||| |||| |||||||||||||  ||||||| | |||| || ||||||||  ||  |||||||| |||||||||| |||||||    
T  35056808 tgagcttatctactaacatacgtttagtaaaactgtttgggagaacttataaaaacagattatgacactttcaataagcttttttcaactta-tttcata 35056710  T
Q  361 agtt 364  Q
    ||||    
T  35056709 agtt 35056706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 27566680 - 27566734
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagtt 364  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  27566680 tgaaaatagcttatgacaactttcacaagcttttttcaacttattttcataagtt 27566734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 387
Target Start/End: Original strand, 39629942 - 39630020
Alignment:
Q  309 ttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||| |||||||||||| |||||||||||| |||||||||||  ||||||||||| |||| |||| || |||||||    
T  39629942 ttgaaaacagcttatgacaattttcataagcttttttcaacttatagtcataagttcttcaatatagcttaaaaaaaca 39630020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 392
Target Start/End: Complemental strand, 34036060 - 34035919
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    |||||||||||||||||||||||| ||||| || |||| | |||  |||  ||||||| |||||||| |||||||||   |||||||| |  ||||||||    
T  34036060 ttgacttatttgagcttatctactgacatatgtattgtgagactacttggaagaacttatgaaaataacttatgacattgttcataagttgttttcaact 34035961  T
Q  351 tattttcataagttctccaatgtagcctataaaaacatttta 392  Q
    |||||||  |||||||| ||  |||| ||| |||||| ||||    
T  34035960 tattttcgcaagttctctaagatagcttatgaaaacaattta 34035919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 367
Target Start/End: Original strand, 27863656 - 27863768
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||||||||| |||  |||||||||||| | ||| ||||| ||||||| |||||| |||||  || || ||||| || ||| ||||| |||||     
T  27863656 cttatttgagcttatccactggcataagttttgtgagactatttgagagaacttatgaaaacagcttgagaaaattttcaaaaacttttttcagcttatg 27863755  T
Q  355 ttcataagttctc 367  Q
    |||||||||||||    
T  27863756 ttcataagttctc 27863768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 38499891 - 38499959
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaa 370  Q
    ||||||||| |||| |||||||||||  |||||||||||| || || ||||||||||||||||||||||    
T  38499891 agaacttttcaaaacagcttatgacatttttcataagctttttccagcttattttcataagttctccaa 38499959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 387
Target Start/End: Original strand, 38138475 - 38138542
Alignment:
Q  320 ttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||  |||| ||||  |||||||||    
T  38138475 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaaca 38138542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 370
Target Start/End: Original strand, 17944271 - 17944389
Alignment:
Q  252 tgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaactt 351  Q
    |||||||||| ||||||||||||  |||||| ||||| | ||||||| | | ||||| | |||| |||||||||||  ||||||| |||| ||||| |||    
T  17944271 tgacttatttaagcttatctactggcataagctttgtgagactgtttcagacaacttataaaaacagcttatgacacttttcatatgcttttttcagctt 17944370  T
Q  352 attttcataagttctccaa 370  Q
    | |||||||| || |||||    
T  17944371 aatttcataaattatccaa 17944389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 495
Target Start/End: Original strand, 45806559 - 45806657
Alignment:
Q  397 aacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaa 495  Q
    |||| ||||||||||||||  |||||||||||||  || | |||||||||||||| || ||||||||| ||||||||  ||| ||| |||| |||||||    
T  45806559 aacaatttaacgttattttctcttttgctataaacatagcttatgcaagcttatacataagtgcttattatgataagtgcttttgctataagctgcaaa 45806657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 420495 - 420378
Alignment:
Q  259 tttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttca 358  Q
    ||||||||| ||||||  | |||| ||||| | ||||||||  ||||||| |||||| |  ||||||||  ||||  |||| | ||||||||||||||||    
T  420495 tttgagcttgtctactggcttaagctttgtgagactgtttgggagaacttatgaaaacaatttatgacagttttctaaagcctttttcaacttattttca 420396  T
Q  359 taagttctccaatgtagc 376  Q
    ||||||||||||| ||||    
T  420395 taagttctccaatatagc 420378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 371
Target Start/End: Complemental strand, 33128899 - 33128776
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||||||||||||||||||| | ||||| |||||||||||| | ||||||  | || || ||||||  ||| ||||| ||||| |||||||| |||    
T  33128899 ttggattgacttatttgagcttatatgctaacttaagttttgtaagattgtttggga-aagttatgaaaactgctgatgac-aattttataagctttttt 33128802  T
Q  346 caacttattttcataagttctccaat 371  Q
     | |||||||||| ||||||||||||    
T  33128801 tagcttattttcacaagttctccaat 33128776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 387
Target Start/End: Original strand, 45790404 - 45790488
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||| |||||||| |||||||||| ||| | |||||| ||||| |||||||||||||||| |||||| |||  ||||||||||    
T  45790404 agaacttatgaaaataacttatgacaatttttaaaagctt-tttcagcttattttcataagttatccaatatagtttataaaaaca 45790488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 364
Target Start/End: Complemental strand, 48470183 - 48470074
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    ||||||||||||||||||   ||||||||||| | | | ||||||  ||||||| |||||| |||||||| ||  |||||||||||| ||| | |||||     
T  48470183 cttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataagcttttttgagcttatg 48470084  T
Q  355 ttcataagtt 364  Q
    ||||||||||    
T  48470083 ttcataagtt 48470074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 367
Target Start/End: Original strand, 3308219 - 3308295
Alignment:
Q  292 actgtttgatagaacttttgaaaatagcttatgacaaatt-tcataagcttatttcaacttattttcataagttctc 367  Q
    ||||||||  ||||||||||||||||||||||| ||  || |||||||||| ||||| |||||||| ||||||||||    
T  3308219 actgtttgggagaacttttgaaaatagcttatgccattttctcataagcttttttcagcttattttaataagttctc 3308295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 38500062 - 38500118
Alignment:
Q  459 gcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||||||||||||||| ||| ||| ||||||||||||||||| ||||||| ||||||    
T  38500062 gcttatcatgataagcgcttgtgctataaactgcaaataagctgtttatctaaacag 38500118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 451
Target Start/End: Original strand, 45806406 - 45806462
Alignment:
Q  395 agaacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttata 451  Q
    |||||| ||||||||||||||| |||||||||||||| || | ||||||||||||||    
T  45806406 agaacaatttaacgttattttatcttttgctataaaaatagcttatgcaagcttata 45806462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 49020017 - 49019877
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttg-aaaatagcttatgacaaatttcataagcttatt 344  Q
    |||| ||||||||||  ||||||||| || ||||| ||||||| | ||||||||  ||||||| || |||| ||||||||| || ||||| || ||| ||    
T  49020017 ttggattgacttattgtagcttatctgctgacatatgttttgtgagactgtttgggagaacttgtggaaaaaagcttatgaaaattttcacaatcttttt 49019918  T
Q  345 tcaacttattttcataagttctccaatgtagcctataaaaa 385  Q
    ||   ||||||||||||||||| |||| || | ||||||||    
T  49019917 tcggtttattttcataagttctacaatataacttataaaaa 49019877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 512
Target Start/End: Original strand, 4970882 - 4970985
Alignment:
Q  409 ttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatc 508  Q
    |||||||| ||||||||||| || || | |||| ||||||||| || |  |||||||||| || | |||| | | |||| ||||||||||||||||||||    
T  4970882 ttattttatcttttgctatagaaatagcttatgtaagcttatacataaccgcttatcatggtagggactttttctataagctgcaaataagccgtttatc 4970981  T
Q  509 caaa 512  Q
    ||||    
T  4970982 caaa 4970985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 370
Target Start/End: Original strand, 3836605 - 3836728
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagtt-ttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatt 344  Q
    |||| ||| ||||||||||||||||||||  | ||||   |||| ||||||||||  ||||||| |||||||||||||||||  ||| |||||||    |    
T  3836605 ttggattgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgac--attacataagccgtct 3836702  T
Q  345 tcaacttattttcataagttctccaa 370  Q
    ||||||||||||||| || |||||||    
T  3836703 tcaacttattttcattagctctccaa 3836728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 23989471 - 23989572
Alignment:
Q  274 taacataagttttgtaaaactgtttg--atagaacttttgaaaatagcttatgaca-aatttcataagcttatttcaactta-ttttcataagttctcca 369  Q
    ||||||||||||||||| ||||||||  | |||| ||  ||||| ||||||  | | |||||||||||||| |||||||||| |||||||||||||||||    
T  23989471 taacataagttttgtaagactgtttgcgagagaagttacgaaaacagcttaaaagataatttcataagcttttttcaacttatttttcataagttctcca 23989570  T
Q  370 at 371  Q
    ||    
T  23989571 at 23989572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 355
Target Start/End: Complemental strand, 5947389 - 5947280
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||||||||||||| |   ||||||||| | | ||||||||  |||||||||||||  |||||||||||  ||||||| |||| ||     
T  5947389 ttggattggcttatttgagcttatctattggtataagttttatgagactgtttggaagaacttttgaaaccagcttatgacatttttcatatgcttttta 5947290  T
Q  346 caacttattt 355  Q
    || |||||||    
T  5947289 cagcttattt 5947280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 387
Target Start/End: Complemental strand, 20526594 - 20526453
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||||||||||| ||||||| |   | || |||||| | ||||||||| ||||||| |||||| || |||| |||  |||| ||||||  |||    
T  20526594 ttggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgtttt 20526495  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
     | ||||||||||| ||||||||||  |||| ||| ||||||    
T  20526494 tagcttattttcattagttctccaaaatagcttatgaaaaca 20526453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 33266408 - 33266461
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttg 299  Q
    |||| |||||||||||||||||||||||  ||||||||||||| ||||| ||||    
T  33266408 ttggattgacttatttgagcttatctaccgacataagttttgtgaaactatttg 33266461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 367
Target Start/End: Complemental strand, 39968068 - 39967947
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||||||| |||||| || |||||||| | | || |||||||| |  ||| |||  ||||||| |||||| |||||||| ||   ||||||||||  |||    
T  39968068 ttggtttggcttattagaacttatctattgatatgagttttgtgattctggttgcgagaacttatgaaaacagcttatggcattgttcataagctgtttt 39967969  T
Q  346 caacttattttcataagttctc 367  Q
    |||||||||||||| |||||||    
T  39967968 caacttattttcattagttctc 39967947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 334
Target Start/End: Original strand, 4970714 - 4970802
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttca 334  Q
    |||| |||||||||||||||||||||  | |||||||| |||| | ||||||||  ||||||| |||||| | |||||| ||| |||||    
T  4970714 ttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaacaacttatggcaattttca 4970802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 368
Target Start/End: Complemental strand, 5947282 - 5947210
Alignment:
Q  296 tttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctcc 368  Q
    |||| ||||||||||||||  |||||||| ||  |||||||||||  ||||| ||||||||||||| ||||||    
T  5947282 tttggtagaacttttgaaaccagcttatggcatttttcataagctcttttcagcttattttcataacttctcc 5947210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 33601963 - 33602087
Alignment:
Q  260 ttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcat 359  Q
    |||||||||||||||  |||||||||| | | ||| |||   | ||||| |||||| |||||||||||  |||||||||| | ||||| ||||  |||||    
T  33601963 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 33602062  T
Q  360 aagttctccaatgtagcctataaaa 384  Q
    |||||||| ||  |||| |||||||    
T  33602063 aagttctctaagatagcttataaaa 33602087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 370
Target Start/End: Complemental strand, 36517715 - 36517603
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    ||||||||||||| |||||  |||||||||| ||| ||||||||  ||||||| | |||| ||||  |||||   ||||||||||  |||||  ||||||    
T  36517715 ttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagct--tgacattgttcataagctattttcagtttattt 36517618  T
Q  356 tcataagttctccaa 370  Q
    |||||| ||||||||    
T  36517617 tcataatttctccaa 36517603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 387
Target Start/End: Original strand, 46280284 - 46280335
Alignment:
Q  336 aagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| ||||| | ||||||||||||||||||||| |||| ||||||||||    
T  46280284 aagcttttttcagcctattttcataagttctccaatatagcttataaaaaca 46280335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 47795905 - 47795838
Alignment:
Q  447 ttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaaca 514  Q
    ||||| || |||| |||||||||||||| ||| ||| |||| |||||||||||| ||||||| |||||    
T  47795905 ttatacataagtggttatcatgataagcgcttatgctataagctgcaaataagctgtttatctaaaca 47795838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 515
Target Start/End: Original strand, 27863843 - 27863897
Alignment:
Q  461 ttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||||||||||||||||| ||| |||| || ||||||||  ||||||||||||||    
T  27863843 ttatcatgataagcacttgtgctataagctacaaataagttgtttatccaaacag 27863897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 514
Target Start/End: Complemental strand, 33678717 - 33678663
Alignment:
Q  460 cttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaaca 514  Q
    ||||||||||||||||||| ||| ||||  ||||||||||| |||| ||||||||    
T  33678717 cttatcatgataagcacttgtgctataagatgcaaataagctgtttgtccaaaca 33678663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 471
Target Start/End: Complemental strand, 46078135 - 46078061
Alignment:
Q  397 aacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgata 471  Q
    |||| |||||| || ||||| ||||| |||||||| |||| |||| ||||||||| || || |||||||||||||    
T  46078135 aacaatttaactttgttttatctttttctataaaaataacttatgtaagcttatacataagcgcttatcatgata 46078061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 8427161 - 8427124
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagt 283  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  8427161 ttggattgatttatttgagcttatctactaacataagt 8427124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 9210969 - 9210916
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttg 299  Q
    |||| |||||||||||||||||||||||| | ||||||||| | | ||||||||    
T  9210969 ttggattgacttatttgagcttatctactgatataagttttctgagactgtttg 9210916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 20882354 - 20882403
Alignment:
Q  266 ttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaa 315  Q
    ||||||||| |||||||||||||||||||||||   ||||||| ||||||    
T  20882354 ttatctactgacataagttttgtaaaactgtttttgagaacttatgaaaa 20882403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 515
Target Start/End: Complemental strand, 33128740 - 33128627
Alignment:
Q  402 tttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagcc 501  Q
    |||||| |||||||| || || |||||||| |||| || | ||||||||  || ||  ||||||||||||||   || |||  ||| ||||||||||||     
T  33128740 tttaactttattttatctctttctataaaaataacgtaagtaagcttatgcataagcacttatcatgataagtgtttgtgctgtaagctgcaaataagct 33128641  T
Q  502 gtttatccaaacag 515  Q
    ||||||||||||||    
T  33128640 gtttatccaaacag 33128627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 371
Target Start/End: Original strand, 40377774 - 40377899
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||| ||||||||||||||| |  ||||||| || | ||||||  | | |  ||||||||| ||||| |||| | ||| |||||||| |||    
T  40377774 ttggattggcttagttgagcttatctactgaattaagtttagtgagactgttgaagaaattttttgaaaacagcttttgactattttaataagctttttt 40377873  T
Q  346 caacttattttcataagttctccaat 371  Q
     |  ||||||||||||||||||||||    
T  40377874 gagtttattttcataagttctccaat 40377899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 328
Target Start/End: Original strand, 43694495 - 43694572
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaa 328  Q
    |||| ||||||||| ||||||||||| |||||||||   | ||||||||  ||||| | ||||||||| |||||||||    
T  43694495 ttgatttatttgagtttatctactaatataagttttacgagactgtttgggagaacctgtgaaaatagtttatgacaa 43694572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 45338523 - 45338466
Alignment:
Q  319 cttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagc 376  Q
    |||||||||| ||| || || || ||||||||||||||||| ||||||||||| ||||    
T  45338523 cttatgacaatttttattagtttttttcaacttattttcatcagttctccaatatagc 45338466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 515
Target Start/End: Original strand, 46280382 - 46280459
Alignment:
Q  438 tatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||| ||||||||  |||||||||||||||||||| | ||| ||| |||| ||  |||||| | ||||||||||||||    
T  46280382 tatgtaagcttatgcatgagtgcttatcatgataaacgcttgtgctataagctataaataaactgtttatccaaacag 46280459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 529720 - 529688
Alignment:
Q  250 tttgacttatttgagcttatctactaacataag 282  Q
    ||||||||||||||||||||||||||| |||||    
T  529720 tttgacttatttgagcttatctactaagataag 529688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 18765422 - 18765370
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaactt 308  Q
    ||||||||||||||||| | ||||||||||||| | ||||||||  |||||||    
T  18765422 ttatttgagcttatctattgacataagttttgtgagactgtttgggagaactt 18765370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 255 - 385
Target Start/End: Complemental strand, 2295235 - 2295105
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    ||||||||||||||||||||  |||||||||||| | ||||||||  ||||||| |||||| |||||||||||| |||||||||||   |||||||||||    
T  2295235 cttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataagctctattcaacttatt 2295136  T
Q  355 ttcataagttctccaatgtagcctataaaaa 385  Q
    |||| ||||||||  || |||| ||||||||    
T  2295135 ttcacaagttctctgatatagcttataaaaa 2295105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 387
Target Start/End: Complemental strand, 49938890 - 49938754
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    |||||||||||||| |||| |  |  |||||||||||| | | ||||||  ||||||| |||||| |||||||||||| ||||| |||||| ||||||||    
T  49938890 ttgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaact 49938791  T
Q  351 tattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||||||||||| ||| |||| ||||||||||    
T  49938790 tattttcataagttctctaatatagcttataaaaaca 49938754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 366
Target Start/End: Complemental strand, 29904890 - 29904779
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    ||||||||||||||||||||  |||||||||||| | ||||||||| ||||||| | |||| |||||||| ||| ||||| |||||| ||||| ||||||    
T  29904890 cttatttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcaccttatt 29904791  T
Q  355 ttcataagttct 366  Q
    ||||||||||||    
T  29904790 ttcataagttct 29904779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 246 - 387
Target Start/End: Original strand, 3233937 - 3234078
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||||||||||||||||||| |  | |||||||||| | |||||| |  ||||||| |||||| | ||||| |||  ||||||||| || |||    
T  3233937 ttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagttttttt 3234036  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    | |||||||||||||||||||||||| |||| ||||||||||    
T  3234037 ctacttattttcataagttctccaatatagcttataaaaaca 3234078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 371
Target Start/End: Complemental strand, 473302 - 473187
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    ||||||||||| ||||||||  |||||||| ||| ||||  ||||  ||||||| |||||| ||||||| |||| |||||||||||| ||||||||||||    
T  473302 cttatttgagcctatctactggcataagttctgtgaaacattttgggagaacttatgaaaaaagcttat-acaattttcataagcttttttcaacttatt 473204  T
Q  355 ttcataagttctccaat 371  Q
    |||||||||||||||||    
T  473203 ttcataagttctccaat 473187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 268 - 371
Target Start/End: Original strand, 41184594 - 41184697
Alignment:
Q  268 atctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctc 367  Q
    |||||||||| |||| || || | |||||||  |||||||| ||||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||    
T  41184594 atctactaacgtaagcttggtgagactgtttactagaacttatgaaaatagcttatgacaattttcataagtttttttcaacttattttcataagttttc 41184693  T
Q  368 caat 371  Q
    ||||    
T  41184694 caat 41184697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 252 - 387
Target Start/End: Complemental strand, 6557114 - 6556978
Alignment:
Q  252 tgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataa-gcttatttcaact 350  Q
    |||||||||||| |||||||||||||||||||||||| | ||| ||||| ||||||| ||||||||||||||||||  ||||| || | || ||| | ||    
T  6557114 tgacttatttgaacttatctactaacataagttttgtgagactatttgagagaacttatgaaaatagcttatgacagttttcaaaaggttttttttagct 6557015  T
Q  351 tattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||| |||||||||||  ||| || | ||||||||||    
T  6557014 tattgtcataagttctttaatataacttataaaaaca 6556978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 387
Target Start/End: Original strand, 51929525 - 51929602
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||| |||  ||||||||||    
T  51929525 tgaaaacagcttatgacaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaaaaca 51929602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 5741754 - 5741615
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataag-cttatt 344  Q
    |||| ||| |||||||||||||| |||||  ||||||||||||  |||||||||  ||||||| |||||| | |||||||| |||||||||||  || ||    
T  5741754 ttggattggcttatttgagcttaactacttgcataagttttgttgaactgtttgggagaacttatgaaaacaacttatgac-aatttcataagtattttt 5741656  T
Q  345 tcaacttattttcataagttctccaatgtagcctataaaaa 385  Q
    ||| || |||||||||||||||| ||| |||| ||||||||    
T  5741655 tcagctgattttcataagttctctaatatagcttataaaaa 5741615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 403 - 515
Target Start/End: Complemental strand, 37473381 - 37473269
Alignment:
Q  403 ttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccg 502  Q
    ||||| || ||||| | |||||||||||| || | |||| ||||||||| || ||||||| |||||||||| |||| |||||||| |||||||||||  |    
T  37473381 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 37473282  T
Q  503 tttatccaaacag 515  Q
    |||||||||||||    
T  37473281 tttatccaaacag 37473269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 259 - 363
Target Start/End: Original strand, 37517101 - 37517205
Alignment:
Q  259 tttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttca 358  Q
    ||||||||||| ||||  |||||||||||| | ||||| ||| |||||||  ||||| |||||||||||| ||||| |||||| |||||| |||||||||    
T  37517101 tttgagcttatatacttgcataagttttgtgagactgtatgaaagaacttacgaaaacagcttatgacaattttcaaaagcttttttcaatttattttca 37517200  T
Q  359 taagt 363  Q
    |||||    
T  37517201 taagt 37517205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 246 - 366
Target Start/End: Original strand, 37617387 - 37617506
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||||||||||| ||||||| |  | |||||||||| | ||||||||  |||| || |||||| ||||| ||||||||||||||||||| | |    
T  37617387 ttggattgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagcttttgacaaatttcataagctt-tgt 37617485  T
Q  346 caacttattttcataagttct 366  Q
    ||||||||||||| |||||||    
T  37617486 caacttattttcacaagttct 37617506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 385
Target Start/End: Original strand, 14576576 - 14576714
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||||||||||||||||  | ||| ||||||   ||||||||  | ||||| |||||| |||||||||||| ||||| |||||| |||    
T  14576576 ttggattggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaagctttttt 14576675  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaa 385  Q
    || |||||||||| |||||||| ||| |||| ||||||||    
T  14576676 cagcttattttca-aagttctctaatatagcttataaaaa 14576714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 327
Target Start/End: Original strand, 39976138 - 39976213
Alignment:
Q  252 tgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||| ||||||||  ||||||||    
T  39976138 tgacttatttgagattatctactgacataagttttgtgaaactgtttgagagaacttatgaaaataatttatgaca 39976213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 50644177 - 50644263
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaattt 332  Q
    |||| |||||||||||||||||||||||||||||| ||||||| | ||||||||  ||||||| |||||| | |||| |||||||||    
T  50644177 ttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaacttacgacaaattt 50644263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 255 - 515
Target Start/End: Original strand, 1510241 - 1510509
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||| |||| ||  | |||||||||||| | |||||||| | || |||||| ||  || || || ||| |||||||||||| ||||||||||||    
T  1510241 cttatttgagtttatatatcagcataagttttgtgatactgtttggtggagcttttggaagcagtttttgccaattttcataagcttttttcaacttatt 1510340  T
Q  355 ttcataagttctccaatgtagcctataaaaaca---------ttttactagaacagtttaacgttattttaccttttgctataaaagtaacatatgcaag 445  Q
    ||| |||||||||||||  ||| ||||||||||          | ||| | |||| || ||| ||| |||| |||||| | ||||| || | | ||||||    
T  1510341 ttcgtaagttctccaatagagcttataaaaacaacttataacctatacaaaaacaattgaacatta-tttatcttttgttttaaaaatagcttttgcaag 1510439  T
Q  446 cttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||||| || ||||||||||| ||||||| ||| ||| ||||  | ||||||||| ||||||||||||||    
T  1510440 cttatatataagtgcttatcaagataagcgcttgtgctataagatacaaataagctgtttatccaaacag 1510509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 387
Target Start/End: Original strand, 17603362 - 17603447
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||||  ||||| |||||||||||| |||||||| ||| || ||||||||||||| |||||||||||| |||| ||||||||||    
T  17603362 agaacttacgaaaacagcttatgacaattttcataaactttttacaacttattttcagaagttctccaatatagcttataaaaaca 17603447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 387
Target Start/End: Original strand, 37631481 - 37631622
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||||||| ||||| || ||||||||| || |||| ||     | ||||| |||||| ||||| |||||| ||||| |||||| |||    
T  37631481 ttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctttttt 37631580  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    || ||||||||||||||||||||||| |||| || |||||||    
T  37631581 cagcttattttcataagttctccaatatagcttacaaaaaca 37631622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 5721073 - 5720934
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataag-cttatt 344  Q
    |||| ||| |||||||||||||| |||||  ||||||||||||   ||||||||  ||||||| |||||| |||||||||| |||||||||||  || ||    
T  5721073 ttggattggcttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttatgac-aatttcataagtattttt 5720975  T
Q  345 tcaacttattttcataagttctccaatgtagcctataaaaa 385  Q
    ||| || ||||||||| |||||| ||| |||| ||||||||    
T  5720974 tcagctgattttcatatgttctctaatatagcttataaaaa 5720934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 5709728 - 5709634
Alignment:
Q  292 actgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||  |||| || |||||||||||| || ||| |||||||||||| |||||||||||||||| |||||||||||| |||| | ||||||||    
T  5709728 actgtttgggagaatttatgaaaatagcttttggcaattttcataagctt-tttcaacttattttcacaagttctccaatatagcttctaaaaaca 5709634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 276 - 359
Target Start/End: Complemental strand, 27976721 - 27976639
Alignment:
Q  276 acataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcat 359  Q
    ||||||||||||| | ||||||||  | ||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||    
T  27976721 acataagttttgttagactgtttggaa-aacttttgaaaatagcttatgacatttttcataagcttttttcagcttattttcat 27976639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 368
Target Start/End: Original strand, 3887554 - 3887676
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||||||||||||||  ||| |   |||||||||||||  |||||||  ||||||| |||||| | |||||||||   ||||||||||  |||    
T  3887554 ttggattgacttatttgagctttactattggtataagttttgtaaggctgtttggaagaacttatgaaaacatcttatgacattgttcataagctgtttt 3887653  T
Q  346 caacttattttcataagttctcc 368  Q
     ||||||||||||||||||||||    
T  3887654 taacttattttcataagttctcc 3887676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 299
Target Start/End: Complemental strand, 15784458 - 15784412
Alignment:
Q  253 gacttatttgagcttatctactaacataagttttgtaaaactgtttg 299  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  15784458 gacttatttgagcttatctactaacataagttttgtaagactgtttg 15784412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 423 - 513
Target Start/End: Original strand, 33541816 - 33541906
Alignment:
Q  423 gctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaac 513  Q
    ||||||||| || | ||| |||||||||| || || |||||||||||||| ||||| ||| ||||||||||||||||  ||||||||||||    
T  33541816 gctataaaaatatcttattcaagcttatacataagcgcttatcatgataaacacttgtgctataaactgcaaataagttgtttatccaaac 33541906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 370
Target Start/End: Original strand, 41195129 - 41195239
Alignment:
Q  257 tatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatttt 356  Q
    ||||||||||| ||||||  |||||||| ||  | ||||||||  |||||||||  |||||||||||||||  ||| |||||||| ||||| ||||||||    
T  41195129 tatttgagcttgtctactggcataagttgtg--atactgtttgggagaacttttataaatagcttatgacat-tttaataagcttttttcagcttatttt 41195225  T
Q  357 cataagttctccaa 370  Q
    ||||||||||||||    
T  41195226 cataagttctccaa 41195239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 387
Target Start/End: Complemental strand, 42174932 - 42174862
Alignment:
Q  317 agcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||||||||| |||||||||||  ||| ||||||||||||||||||||||||| || | ||||||||||    
T  42174932 agcttatgacaattttcataagctgtttttaacttattttcataagttctccaatataacttataaaaaca 42174862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 370
Target Start/End: Complemental strand, 7069553 - 7069440
Alignment:
Q  257 tatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatttt 356  Q
    |||||||||||||||||||| || |||||||||| ||| ||||  ||||||| | |||| |||||||| ||   |||||||| || |||||| |||||||    
T  7069553 tatttgagcttatctactaaaattagttttgtaagactatttggaagaacttatcaaaacagcttatgccattgttcataagtttttttcaaattatttt 7069454  T
Q  357 cataagttctccaa 370  Q
    ||  ||||||||||    
T  7069453 cactagttctccaa 7069440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 368
Target Start/End: Complemental strand, 7941744 - 7941632
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    ||||||||| |||||| ||||| | |||||||| | ||||||||  |||| || |||||| |||||||||||   |||  |||||  |||||||||||||    
T  7941744 ttatttgagtttatctgctaacgtgagttttgtgagactgtttggaagaatttatgaaaacagcttatgacattgttccgaagctattttcaacttattt 7941645  T
Q  356 tcataagttctcc 368  Q
    |||||||||||||    
T  7941644 tcataagttctcc 7941632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 37473495 - 37473427
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaa 370  Q
    |||||||||||||| | |||||||||  |||||||||||| || || ||||||||||||||||||||||    
T  37473495 agaacttttgaaaacaacttatgacatttttcataagctttttccagcttattttcataagttctccaa 37473427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 246 - 358
Target Start/End: Original strand, 42575391 - 42575503
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||||||||||||||||| ||||| |||||| |  |||||||| | || || | |||| | |||||||||  |||||||||||| |||    
T  42575391 ttggattgccttatttgagcttatctactagcataaattttgtgaggctgtttgagaaaatttataaaaacaacttatgacagttttcataagctttttt 42575490  T
Q  346 caacttattttca 358  Q
    |||||| ||||||    
T  42575491 caacttcttttca 42575503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 515
Target Start/End: Original strand, 5894282 - 5894353
Alignment:
Q  444 agcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||||||| || || |||||||||||||||||||| ||| |||| || ||||||||| ||||||||||||||    
T  5894282 agcttatacataagcgcttatcatgataagcacttgtgctataagcttcaaataagctgtttatccaaacag 5894353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 387
Target Start/End: Complemental strand, 36872876 - 36872739
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||| |||||| |||  |||||||||||||  | |||||||   |||| || ||||||   |||||||||| ||| |||||||| |||    
T  36872876 ttggattggcttatttaagcttaactaacaacataagttttgcgagactgttttggagaatttatgaaaa---cttatgacaattttgataagctt-ttt 36872781  T
Q  346 caacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||||||||||||||| |||| |||| | ||||||||    
T  36872780 caacttattttcataagttctgcaatatagcttgtaaaaaca 36872739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 246 - 367
Target Start/End: Original strand, 10199330 - 10199451
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataag-ttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatt 344  Q
    |||| ||||||||||||||||||||||||||||||||   |||| | ||| ||||  ||||||  ||||||||||||||||| |  |||||||| |  ||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgac-atgttcataagttgttt 10199428  T
Q  345 tcaacttattttcataagttctc 367  Q
    ||| |||||||||||||| ||||    
T  10199429 tcagcttattttcataagctctc 10199451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 517
Target Start/End: Original strand, 47498977 - 47499035
Alignment:
Q  459 gcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacagtg 517  Q
    |||||||||||||||||||| ||| |||| |||||||||||  ||||||||||||||||    
T  47498977 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtg 47499035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 11941405 - 11941296
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaact 350  Q
    ||||||||||||| ||| ||||||| |||| ||| ||| | ||||||||  ||| ||| |||||||||||||| |||   ||||||||||  ||||| ||    
T  11941405 ttgacttatttgaacttttctactagcatatgttatgtgagactgtttgggagagcttatgaaaatagcttataacattgttcataagctgttttcagct 11941306  T
Q  351 tattttcata 360  Q
    ||||||||||    
T  11941305 tattttcata 11941296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 15477657 - 15477592
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctc 367  Q
    ||||||| |||||| |||||||||||| ||||| |||||| ||||| ||||| |||||||||||||    
T  15477657 agaacttatgaaaacagcttatgacaattttcaaaagcttttttcagcttatattcataagttctc 15477592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 387
Target Start/End: Original strand, 43230780 - 43230833
Alignment:
Q  334 ataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||    
T  43230780 ataagcttttttcaacttattttcattagttctccaatatagcctataagaaca 43230833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 387
Target Start/End: Complemental strand, 1509850 - 1509758
Alignment:
Q  295 gtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||| ||||||||||| ||| ||||||||  || | |||||||||| ||||||||||||| || |||||||||||   ||| ||||||||||    
T  1509850 gtttggtagaacttttggaaacagcttatggaaattctcataagcttttttcaacttatttacacaagttctccaacagagcttataaaaaca 1509758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 387
Target Start/End: Original strand, 7136970 - 7137061
Alignment:
Q  295 gtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| ||||||| ||||||| |||||||||| ||| |||||| |  ||||| ||||||||||||||||||||||  |||| ||| ||||||    
T  7136970 gtttgaaagaacttatgaaaatcgcttatgacatatt-cataagttattttcagcttattttcataagttctccaagatagcttatgaaaaca 7137061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 10233579 - 10233651
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||||| ||||||||| ||| ||||| ||||||||| ||||||||  ||||||| |||||| |||||||||||    
T  10233579 cttattagagcttatccactgacatatgttttgtaagactgtttggaagaacttatgaaaacagcttatgaca 10233651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 387
Target Start/End: Complemental strand, 13810137 - 13810005
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||| ||||||||||| || |||||||||| | ||| ||| | ||||||| |||| | || ||||||||| ||||| ||| || | | | ||||||    
T  13810137 cttatttgtgcttatctactgacgtaagttttgtgagactcttttagagaacttatgaatacagtttatgacaattttcaaaagtttttcttagcttatt 13810038  T
Q  355 ttcataagttctccaatgtagcctataaaaaca 387  Q
    |||| |||||||| ||| |||  ||||||||||    
T  13810037 ttcacaagttctctaatatagtttataaaaaca 13810005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 370
Target Start/End: Original strand, 24915037 - 24915097
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaa 370  Q
    |||||| | |||||||||  |||||||||||| |||||||||||||||| |||||||||||    
T  24915037 tgaaaacaacttatgacatttttcataagcttttttcaacttattttcacaagttctccaa 24915097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 514
Target Start/End: Complemental strand, 6556944 - 6556889
Alignment:
Q  459 gcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaaca 514  Q
    |||||||||||||||||||| ||| ||||||| |||| |||| |||||||||||||    
T  6556944 gcttatcatgataagcacttgtgctataaactacaaagaagctgtttatccaaaca 6556889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 33204323 - 33204378
Alignment:
Q  253 gacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaactt 308  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||||  |||||||    
T  33204323 gacttatttgagcttatctactgacataagttttgtgagactgtttgggagaactt 33204378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 38001734 - 38001663
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgac 326  Q
    |||||||||| ||||| ||| ||||||||||||| | ||||||||  ||||||| |||||| ||||||||||    
T  38001734 cttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttatgac 38001663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 1432663 - 1432582
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||| ||| |||||||||||||||| ||  |||||| |||||| | ||||||||  ||||||| |||||||||| |||||||    
T  1432663 ttggattggcttatttgagcttatccaccgacataaattttgtgagactgtttggaagaacttatgaaaatagcgtatgaca 1432582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 489333 - 489257
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    ||||||||||| || |||||||||||||||| |||||||| |||||||   | ||||| |||||| | |||||||||    
T  489333 ttgacttatttcagattatctactaacataatttttgtaagactgtttagaaaaacttatgaaaacaacttatgaca 489257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 370
Target Start/End: Complemental strand, 2778039 - 2777916
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| ||||||| |||||||||| |  |||||||||||| | |||||||   ||||||| |||||  | ||||||||  ||| |||||||   |||    
T  2778039 ttggattggcttattttagcttatctatttgcataagttttgtgagactgtttaggagaacttatgaaaccaacttatgacgtatt-cataagccgtttt 2777941  T
Q  346 caacttattttcataagttctccaa 370  Q
    || ||||||||||||||||||||||    
T  2777940 cagcttattttcataagttctccaa 2777916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 14443500 - 14443456
Alignment:
Q  343 tttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||| ||||||||||||| |||||||||||||| ||||||||||    
T  14443500 tttcaccttattttcataaattctccaatgtagcttataaaaaca 14443456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 515
Target Start/End: Complemental strand, 14331730 - 14331659
Alignment:
Q  444 agcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    |||||||| || |||||||||||||| |||| ||| ||| |||| || ||||||||| ||||||| ||||||    
T  14331730 agcttatacataagtgcttatcatgagaagcgcttgtgctataagcttcaaataagctgtttatctaaacag 14331659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 24562452 - 24562503
Alignment:
Q  464 tcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    ||||||||||||| | ||| |||| |||||||||||| ||||||||||||||    
T  24562452 tcatgataagcacatgtgctataagctgcaaataagctgtttatccaaacag 24562503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 27820475 - 27820530
Alignment:
Q  460 cttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    ||||||||||||||| ||| ||| |||| |||||||||||  ||||||||||||||    
T  27820475 cttatcatgataagcgcttatgctataagctgcaaataagttgtttatccaaacag 27820530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 387
Target Start/End: Original strand, 30286499 - 30286582
Alignment:
Q  304 aacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||| |||||| |||||||||||| |||||||||||| |||||||| | |||  | |||||| |||  |||| ||||||||||    
T  30286499 aacttatgaaaacagcttatgacaattttcataagcttttttcaactaaattttcttagttcttcaaaatagcttataaaaaca 30286582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 387
Target Start/End: Complemental strand, 36872662 - 36872595
Alignment:
Q  320 ttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| || |||||||| ||| ||||||||||||||||| |||||| ||||||| | | ||||||||    
T  36872662 ttatgaaaattttcataatcttttttcaacttattttcattagttctacaatgtaccttgtaaaaaca 36872595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 596311 - 596201
Alignment:
Q  258 atttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttc 357  Q
    |||||| ||| |||| | |||||||||||||||  |||||||  |||| | ||||||| | || ||||||| | ||  ||| || |||||||||||||||    
T  596311 atttgatcttttctattgacataagttttgtaaggctgtttggaagaagtgttgaaaacaactcatgacaattatcgcaagtttttttcaacttattttc 596212  T
Q  358 ataagttctcc 368  Q
    || ||||||||    
T  596211 attagttctcc 596201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 487
Target Start/End: Original strand, 3234105 - 3234195
Alignment:
Q  397 aacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataa 487  Q
    |||| ||||||||| ||||| |||||||||| ||  || | |||||| ||||||| || || |||||||||||||||| ||| ||| ||||    
T  3234105 aacaatttaacgttgttttatcttttgctatgaatatagcttatgcacgcttatatataagcgcttatcatgataagcgcttgtgctataa 3234195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 370
Target Start/End: Complemental strand, 6292640 - 6292517
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataag---ttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagctta 342  Q
    |||| |||||||||||||||||||||||| |||||||   |||||  | | ||||||  |||| |||| |||| |||||||||| |  ||||||||||      
T  6292640 ttggattgacttatttgagcttatctactgacataagcacttttg--agattgtttgggagaa-tttttaaaacagcttatgac-atgttcataagctgt 6292545  T
Q  343 tttcaacttattttcataagttctccaa 370  Q
    ||||| |||||||||||||| |||||||    
T  6292544 tttcagcttattttcataagctctccaa 6292517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 7069427 - 7069385
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgt 288  Q
    |||| |||||||||||||||||||| |||||| ||||||||||    
T  7069427 ttggattgacttatttgagcttatcaactaacgtaagttttgt 7069385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 473
Target Start/End: Complemental strand, 17830136 - 17830066
Alignment:
Q  403 ttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataag 473  Q
    ||||| |||||||| | |||||||||||| || | |||| || | ||||||| ||||||||||||||||||    
T  17830136 ttaactttattttatcatttgctataaaaatagcttatgtaatcgtatagataagtgcttatcatgataag 17830066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 513
Target Start/End: Complemental strand, 30191973 - 30191863
Alignment:
Q  403 ttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccg 502  Q
    ||||| ||||||||  ||||||||||||| || | || | |  |||||| |  |||||||||||| |||||||||||||| ||||  || ||||||||      
T  30191973 ttaactttattttattttttgctataaaaatagcttaggtatacttatacacaagtgcttatcataataagcacttctgctataagttgtaaataagcta 30191874  T
Q  503 tttatccaaac 513  Q
    |||||||||||    
T  30191873 tttatccaaac 30191863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 514
Target Start/End: Complemental strand, 51688630 - 51688576
Alignment:
Q  460 cttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaaca 514  Q
    ||||||||||||||||||| | | |||| |||||||||||  |||||||||||||    
T  51688630 cttatcatgataagcacttgtactataagctgcaaataagttgtttatccaaaca 51688576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 376
Target Start/End: Complemental strand, 10799513 - 10799480
Alignment:
Q  343 tttcaacttattttcataagttctccaatgtagc 376  Q
    ||||| ||||||||||||||||||||||||||||    
T  10799513 tttcagcttattttcataagttctccaatgtagc 10799480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 370
Target Start/End: Original strand, 27970247 - 27970340
Alignment:
Q  277 cataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaa 370  Q
    |||||||||||| | ||| ||||  ||||||| | ||||  | ||||||||  |||||||||||| |||||  |||||||||||||||| ||||    
T  27970247 cataagttttgtgatactctttgggagaacttataaaaacggtttatgacatttttcataagcttttttcagtttattttcataagttccccaa 27970340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 36514606 - 36514679
Alignment:
Q  254 acttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    ||||||||||| |||||||||  |||||||||| | | |||||| |  ||||||| |||||||| |||||||||    
T  36514606 acttatttgagtttatctactgccataagttttttgagactgttagggagaacttatgaaaataacttatgaca 36514679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 38116004 - 38116041
Alignment:
Q  251 ttgacttatttgagcttatctactaacataagttttgt 288  Q
    |||||||||||||||||||||||| || ||||||||||    
T  38116004 ttgacttatttgagcttatctactgacgtaagttttgt 38116041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 17830227 - 17830179
Alignment:
Q  317 agcttatgacaaatttcataagcttatttcaacttattttcataagttc 365  Q
    |||| ||||||  |||||||||||| |||||||||||||||| ||||||    
T  17830227 agctaatgacatttttcataagcttttttcaacttattttcaaaagttc 17830179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 24225253 - 24225297
Alignment:
Q  343 tttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| ||||||||||||||| ||||||||||| ||| ||||||    
T  24225253 tttcaaattattttcataagttttccaatgtagcttatgaaaaca 24225297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 366
Target Start/End: Original strand, 27146177 - 27146297
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||| ||||||||||||||| |  |||||||||||| | |||  |||  |||||||  | ||| | |||||||||   ||||||||||  |||    
T  27146177 ttggattgactgatttgagcttatctattggcataagttttgtgagacttgttggaagaacttaaggaaacaacttatgacattgttcataagctgtttt 27146276  T
Q  346 caacttattttcataagttct 366  Q
    ||||||| |||| ||||||||    
T  27146277 caacttactttcgtaagttct 27146297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 387
Target Start/End: Original strand, 27820344 - 27820400
Alignment:
Q  331 ttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||||  ||||| ||||||||||||| ||||||||  |||| ||||||||||    
T  27820344 ttcataagctattttcagcttattttcataaattctccaagatagcttataaaaaca 27820400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 31774128 - 31774221
Alignment:
Q  402 tttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataag 499  Q
    ||||||||||||||   ||||||||||||| || | |||    ||||||| || ||||||||| ||||||||||||| | | |||| |||||||||||    
T  31774128 tttaacgttattttctattttgctataaaaatagcttat----gcttataaataagtgcttattatgataagcacttatactataagctgcaaataag 31774221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 387
Target Start/End: Original strand, 37842287 - 37842418
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttatt 354  Q
    |||||||||||||||||||| | |||||||| || | ||||||   |||||||| |||||| | || ||||| |  |||||||||   ||||| ||||||    
T  37842287 cttatttgagcttatctactgatataagtttggtgacactgttcagtagaacttatgaaaacatctaatgac-atgttcataagcagttttcagcttatt 37842385  T
Q  355 ttcataagttctccaatgtagcctataaaaaca 387  Q
    || ||||||||| |||  |||| ||| ||||||    
T  37842386 tttataagttcttcaagatagcttatgaaaaca 37842418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 38247465 - 38247397
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatg 324  Q
    |||||||| ||||||||||  ||||||||||||   ||||||||  ||||||| |||||| ||||||||    
T  38247465 ttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagcttatg 38247397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 51190977 - 51190905
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    ||||||||||||||| |||| ||||| ||||||  | ||||||| | ||||||| | ||||| ||||||||||    
T  51190977 cttatttgagcttatatactgacatatgttttgcgagactgtttaagagaacttataaaaatggcttatgaca 51190905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 498
Target Start/End: Complemental strand, 18076184 - 18076083
Alignment:
Q  397 aacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaat 496  Q
    |||| |||||| |||||||  |||||||||||||| |||| |||||||||||||| || ||||||||| ||||||||| ||| ||| |||| ||||||||    
T  18076184 aacaatttaaccttattttctcttttgctataaaaataacttatgcaagcttatacataagtgcttattatgataagcgcttgtgctataagctgcaaat 18076085  T
Q  497 aa 498  Q
    ||    
T  18076084 aa 18076083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 370
Target Start/End: Complemental strand, 2455126 - 2455015
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    |||||||| |||||||||||||||||||||||| | ||||||||  ||||||| ||||||   |||||||||   ||||||| ||  ||||| |||||||    
T  2455126 ttatttgaacttatctactaacataagttttgtgagactgtttgggagaacttctgaaaa---cttatgacattgttcataacctgttttcagcttattt 2455030  T
Q  356 tcataagttctccaa 370  Q
    |||| ||||||||||    
T  2455029 tcattagttctccaa 2455015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 370
Target Start/End: Original strand, 20368127 - 20368226
Alignment:
Q  270 ctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctcca 369  Q
    ||||| ||||||||||||||| ||| ||||  ||||||| |||||| | |||||||||  || ||||||||  |||||||||||||||||||||||||||    
T  20368127 ctactgacataagttttgtaagactatttgggagaacttatgaaaacaacttatgacatgtt-cataagctagtttcaacttattttcataagttctcca 20368225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 246 - 361
Target Start/End: Complemental strand, 848136 - 848022
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||||||||||||| || |||||||||||| | ||||||||  ||||||| | ||||  ||||||||||  |||| ||||||| |||    
T  848136 ttggattgccttatttgagcttatcta-tagcataagttttgtgagactgtttggaagaacttataaaaactgcttatgacatttttcttaagctttttt 848038  T
Q  346 caacttattttcataa 361  Q
    || |||||||||||||    
T  848037 cagcttattttcataa 848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 515
Target Start/End: Complemental strand, 6538484 - 6538387
Alignment:
Q  418 cttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    ||||||||| |||| |||| |||||||||||||| || || ||||||||| |||||  ||| ||| |||| ||||||||||||  |||||||||||||    
T  6538484 cttttgctaaaaaactaacttatgcaagcttatacataagcgcttatcattataagtgcttgtgctataagctgcaaataagctatttatccaaacag 6538387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 246 - 366
Target Start/End: Complemental strand, 34430862 - 34430743
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||| |||||||||||||||| ||| | ||||||||||||| | ||||||  | || || |||||| | |||||||||| ||||||| |||| ||     
T  34430862 ttggattggcttatttgagcttatcaactga-ataagttttgtaagattgtttgggataatttatgaaaacaacttatgacaattttcatatgctttttc 34430764  T
Q  346 caacttattttcataagttct 366  Q
     ||||||||||||||||||||    
T  34430763 aaacttattttcataagttct 34430743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 256 - 370
Target Start/End: Complemental strand, 2455397 - 2455283
Alignment:
Q  256 ttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattt 355  Q
    |||||||||||||||||| ||||||||||| || ||||| ||||| ||||||| |||||| | ||||| |||   || ||||| |  ||||| |||||||    
T  2455397 ttatttgagcttatctacaaacataagtttggtgaaactatttgagagaacttatgaaaacaacttattacattgtttataagttgttttcagcttattt 2455298  T
Q  356 tcataagttctccaa 370  Q
    ||| || ||||||||    
T  2455297 tcacaacttctccaa 2455283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 6536679 - 6536622
Alignment:
Q  330 tttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||||||||| ||||||||||||||||||| ||||||||| |||| | ||||||||    
T  6536679 tttcataagcttttttcaacttattttcataaattctccaatatagcttctaaaaaca 6536622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 387
Target Start/End: Complemental strand, 9763644 - 9763567
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| |||||||||||  ||| |||||||| |||||||||| ||||||||||||| |||| |||| ||| ||||||    
T  9763644 tgaaaacagcttatgacacttttgataagcttttttcaacttaatttcataagttctacaatatagcttatgaaaaca 9763567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 387
Target Start/End: Complemental strand, 31624181 - 31624097
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||| |||||| |||||||||||  || ||||||||  ||||||||||||||||||| ||||||||  |||||||| ||||||    
T  31624181 agaacttatgaaaacagcttatgacatgtt-cataagctgttttcaacttattttcataatttctccaagatagcctatgaaaaca 31624097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 370
Target Start/End: Complemental strand, 24982853 - 24982729
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| |||||| ||| || |||||||||||||||||||||||| | |||||||   ||||| ||||| || |||||||||||  ||| || ||||| |||    
T  24982853 ttggattgactaattagatcttatctactaacataagttttgtgagactgttttggagaacatttgagaacagcttatgacatttttaatgagctttttt 24982754  T
Q  346 caacttattttcataagttctccaa 370  Q
     | ||||   |||||||||||||||    
T  24982753 tagcttaccctcataagttctccaa 24982729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 6538562 - 6538519
Alignment:
Q  344 ttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||||||| |||||||||||||| |||||||||||||||    
T  6538562 ttcaacttattttaataagttctccaatatagcctataaaaaca 6538519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 263 - 376
Target Start/End: Complemental strand, 30536634 - 30536528
Alignment:
Q  263 agcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataag 362  Q
    ||||||||||||  | |||||||||| | ||||||||  || |||| |||||||||||||||||| |       ||||| |||||||||||||||||||     
T  30536634 agcttatctactggcgtaagttttgtgagactgtttgggaggacttatgaaaatagcttatgacaga-------agcttttttcaacttattttcataaa 30536542  T
Q  363 ttctccaatgtagc 376  Q
    ||||||||| ||||    
T  30536541 ttctccaatatagc 30536528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 35069543 - 35069585
Alignment:
Q  255 cttatttgagcttatctactaacataagttttgtaaaactgtt 297  Q
    |||||||||||||||||||| ||||||||||||||| ||||||    
T  35069543 cttatttgagcttatctactgacataagttttgtaagactgtt 35069585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 387
Target Start/End: Original strand, 34430447 - 34430524
Alignment:
Q  310 tgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    |||||| |||||||||||  | |||||||||| ||||| ||||||||||||| ||||||||  |||| ||| ||||||    
T  34430447 tgaaaacagcttatgacatttatcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaaca 34430524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 514
Target Start/End: Complemental strand, 34430663 - 34430587
Alignment:
Q  438 tatgcaagcttatagatgagtgcttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaaca 514  Q
    |||| ||||||||| || || || ||||||||||||||||| ||| |||| |||||||||||  ||||||| |||||    
T  34430663 tatggaagcttatacataagcgcctatcatgataagcacttgtgctataagctgcaaataagatgtttatcgaaaca 34430587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 366
Target Start/End: Original strand, 34882343 - 34882463
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||||||||||| | |||||||||||  |||||||||||   |||||||   |||| || ||||||||  ||||||||   |||||||| |  |||    
T  34882343 ttggattgacttatttcatcttatctactagtataagttttgttggactgtttaggagaatttatgaaaataagttatgacattgttcataagttgtttt 34882442  T
Q  346 caacttattttcataagttct 366  Q
    | |||||||||||||||||||    
T  34882443 ccacttattttcataagttct 34882463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 264306 - 264251
Alignment:
Q  460 cttatcatgataagcacttctgcaataaactgcaaataagccgtttatccaaacag 515  Q
    ||||||||||||||||||| ||| |||| |||||||| ||| ||| ||||||||||    
T  264306 cttatcatgataagcacttgtgctataagctgcaaattagctgttaatccaaacag 264251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 371
Target Start/End: Original strand, 9912131 - 9912238
Alignment:
Q  264 gcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagt 363  Q
    ||||||||||| | ||||||||||    |||||||   ||||||| |||||  |||||||||||   ||||||||||  ||| | |||||||||||||||    
T  9912131 gcttatctactgatataagttttgggcgactgtttcggagaacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataagt 9912230  T
Q  364 tctccaat 371  Q
    ||||||||    
T  9912231 tctccaat 9912238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 349
Target Start/End: Original strand, 21405076 - 21405179
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||| ||||||||||||||||||| |||| ||||||||||||| | | | ||||   |||||  ||||||||| |||||| |  ||||| |||||| |||    
T  21405076 ttggattgacttatttgagcttatatactgacataagttttgtgagaatatttgggggaactaatgaaaataggttatgatagttttcaaaagctttttt 21405175  T
Q  346 caac 349  Q
    ||||    
T  21405176 caac 21405179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 381
Target Start/End: Complemental strand, 30926667 - 30926533
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttattt 345  Q
    |||||||| ||||||||||||||| | ||  ||||| |||  | | ||||||||  ||||||| |||||| |||||||||||| ||||||  | || |||    
T  30926667 ttggtttggcttatttgagcttattttctggcataaatttgatgagactgtttggaagaacttatgaaaacagcttatgacaattttcat-gggtttttt 30926569  T
Q  346 caacttattttcataagttctccaatgtagcctata 381  Q
    |||||| |||||| |||| ||| ||| |||| ||||    
T  30926568 caactttttttcacaagtcctctaatatagcgtata 30926533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 835183 - 835225
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagttttgt 288  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||    
T  835183 ttggattgccttatttgagcttatctactagcataagttttgt 835225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 19411491 - 19411589
Alignment:
Q  266 ttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagtt 364  Q
    |||||||||  |||||||||| ||  | ||||||  |||||||||| ||| |||||||||||  | |||||||||| ||||  ||||||||| ||||||    
T  19411491 ttatctacttgcataagttttatatgaatgtttgggagaacttttgtaaacagcttatgacagttctcataagcttttttcggcttattttcgtaagtt 19411589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 30536640 - 30536694
Alignment:
Q  397 aacagtttaacgttattttaccttttgctataaaagtaacatatgcaagcttata 451  Q
    |||| ||||||||||| ||| |||||||||||||| || | ||||||||||||||    
T  30536640 aacaatttaacgttatcttatcttttgctataaaaatagcttatgcaagcttata 30536694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 31813291 - 31813185
Alignment:
Q  264 gcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagt 363  Q
    |||||| ||||  |||||||||||| | ||| ||||  ||||||| ||||||| |||||||| |   |||||||||   ||||| |||||||||||| ||    
T  31813291 gcttatttactggcataagttttgtgagactatttgggagaacttatgaaaattgcttatgagattgttcataagccgttttcagcttattttcatatgt 31813192  T
Q  364 tctccaa 370  Q
    |||||||    
T  31813191 tctccaa 31813185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 33089654 - 33089572
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataagt-tttgtaaaactgtttgatagaacttttgaaaatagcttatgaca 327  Q
    |||| |||||||||||||||||||||||| ||||| || ||||| | ||| ||| | ||||||| |||||| |||||| ||||    
T  33089654 ttgggttgacttatttgagcttatctactgacatatgtatttgtgagactatttcagagaacttatgaaaacagcttaggaca 33089572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 387
Target Start/End: Original strand, 6016381 - 6016438
Alignment:
Q  330 tttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||| || |||||||||||||| ||| |||||||||| |||  ||||||||||    
T  6016381 tttcataagtttttttcaacttatttttatatgttctccaatatagtttataaaaaca 6016438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 10645319 - 10645376
Alignment:
Q  258 atttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaa 315  Q
    ||||||| ||||||| | ||||||||||||||| ||||||||  ||||||| ||||||    
T  10645319 atttgaggttatctaatgacataagttttgtaagactgtttgggagaacttatgaaaa 10645376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 18076280 - 18076231
Alignment:
Q  317 agcttatgacaaatttcataagcttatttcaacttattttcataagttct 366  Q
    |||||||||||| |||||| ||||  ||||||||||| ||||||||||||    
T  18076280 agcttatgacaattttcatgagctgttttcaacttatattcataagttct 18076231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 366
Target Start/End: Original strand, 23063468 - 23063577
Alignment:
Q  258 atttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttc-ataagcttatttcaacttatttt 356  Q
    |||||| ||||||||||  |||||||||||  | |||||||   ||||||| ||||||||||||||| ||   ||| |||||||  | |||||||| |||    
T  23063468 atttgaacttatctactggcataagttttgatacactgtttagaagaacttatgaaaatagcttatgccattgttcaataagctactctcaacttaattt 23063567  T
Q  357 cataagttct 366  Q
    ||||||||||    
T  23063568 cataagttct 23063577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 2735171 - 2735099
Alignment:
Q  292 actgtttgatagaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagtt 364  Q
    ||||||||| | ||||| ||||||  ||||||||||  |||||||||||  ||||  ||||||||||||||||    
T  2735171 actgtttgagataacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataagtt 2735099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 12111115 - 12111079
Alignment:
Q  246 ttggtttgacttatttgagcttatctactaacataag 282  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  12111115 ttggattgacttatttgagcttatctactagcataag 12111079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 35070628 - 35070696
Alignment:
Q  302 agaacttttgaaaatagcttatgacaaatttcataagcttatttcaacttattttcataagttctccaa 370  Q
    |||||||  ||||| |||||||||||| ||||| |||||| |||   ||| ||||||||||||||||||    
T  35070628 agaacttacgaaaacagcttatgacaattttcacaagcttttttgggcttgttttcataagttctccaa 35070696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 478
Target Start/End: Original strand, 207670 - 207744
Alignment:
Q  404 taacgttattttaccttttgctataaaagtaacatatgcaagcttatagatgagtgcttatcatgataagcactt 478  Q
    ||||||||||||| |||||| ||  ||| || | |||||||||||||| || |||||||||||||||||||||||    
T  207670 taacgttattttatcttttgttactaaaatagcttatgcaagcttatacataagtgcttatcatgataagcactt 207744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 374
Target Start/End: Original strand, 207582 - 207627
Alignment:
Q  329 atttcataagcttatttcaacttattttcataagttctccaatgta 374  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||    
T  207582 atttcatacgcttttttcaacttatttttataagttctccaatgta 207627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 320 - 387
Target Start/End: Complemental strand, 58816 - 58749
Alignment:
Q  320 ttatgacaaatttcataagcttatttcaacttattttcataagttctccaatgtagcctataaaaaca 387  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||||| |||  |||| ||| ||||||    
T  58816 ttatgacaattttcataagcttttttcaacttaatttcataagttcttcaacatagcttatgaaaaca 58749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 22308 - 22255
Alignment:
Q  317 agcttatgacaaatttcataagcttatttcaacttattttcataagttctccaa 370  Q
    |||||||||||| |||| ||||||| ||||| |||||||||||||||| |||||    
T  22308 agcttatgacaattttcgtaagcttttttcagcttattttcataagttttccaa 22255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 386
Target Start/End: Complemental strand, 23682 - 23639
Alignment:
Q  343 tttcaacttattttcataagttctccaatgtagcctataaaaac 386  Q
    |||||||||||||||| |||||||||||| |||| |||||||||    
T  23682 tttcaacttattttcacaagttctccaatatagcttataaaaac 23639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 366
Target Start/End: Complemental strand, 52052 - 52005
Alignment:
Q  319 cttatgacaaatttcataagcttatttcaacttattttcataagttct 366  Q
    ||||||| || ||||| |||||| ||||||||||||||||||||||||    
T  52052 cttatgataattttcaaaagcttttttcaacttattttcataagttct 52005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 918 - 999
Alignment:
Q  260 ttgagcttatctactaacataagttttgtaaaactgtttgatagaacttttgaaaatagcttatgacaaatttcataagctt 341  Q
    ||||||||||||||   |||||||||||| | |||||||   | ||||| | ||||||||||||||||  ||||||||||||    
T  918 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctt 999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 431
Target Start/End: Original strand, 21311 - 21394
Alignment:
Q  350 ttattttcataagttctccaatgtagcctataaaaaca--ttttactagaacagtttaacgttattttaccttttgctataaaa 431  Q
    |||||||||||| ||||||||| |||| ||| ||||||  || ||| | |||| |||||| |||||||| ||||| ||||||||    
T  21311 ttattttcataatttctccaatatagcttatgaaaacagcttatacgaaaacaatttaactttattttatcttttcctataaaa 21394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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