View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13425_low_31 (Length: 323)
Name: NF13425_low_31
Description: NF13425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13425_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 16 - 312
Target Start/End: Complemental strand, 48372985 - 48372688
Alignment:
| Q |
16 |
tcatttaccgtcggtcgtgnnnnnnncaagttgtttgattgcaaaacacattacatttgaagtttttatgctgaacggatcagaactacaggagggaaaa |
115 |
Q |
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| T |
48372985 |
tcatttaccgtcggtcgtgtttttttcaagttgtttgattgcaaaacacattacatttgaagtttttatgctgaacggatcagaactacaggagggaaaa |
48372886 |
T |
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| Q |
116 |
aatgttaaacacaacaaaaatagactcaaagacagagatcaattattaatgtgtgtatagtttattga-nnnnnnnattggatagtaacaatttcaaaga |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
48372885 |
aatgttaaacacaacaaaaatagactcaaagacagagatcaattattaatgtgtgtatagtttattgatttcttttattggatagtaacaatttcaaaga |
48372786 |
T |
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| Q |
215 |
cagagatcaaaatcacataagtgactaaaacatgtttcatccgcaaaccaatctaaaaaagcgacctttcannnnnnngtgcttcttcttgatccctt |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
48372785 |
cagagatcaaaatcacataagtgactaaaacatgtttcatccgcaaaccaatctaaaaaagcgacctttcatttttctgtgcttcttcttgatccctt |
48372688 |
T |
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