View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13426_high_6 (Length: 239)

Name: NF13426_high_6
Description: NF13426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13426_high_6
NF13426_high_6
[»] chr3 (23 HSPs)
chr3 (86-222)||(44034342-44034479)
chr3 (1-81)||(39616917-39616997)
chr3 (1-92)||(53703792-53703884)
chr3 (1-74)||(45113747-45113820)
chr3 (1-81)||(31376181-31376261)
chr3 (1-45)||(8769196-8769240)
chr3 (1-74)||(50100207-50100280)
chr3 (1-89)||(53284378-53284466)
chr3 (6-81)||(48643610-48643685)
chr3 (1-46)||(25313319-25313364)
chr3 (1-46)||(36191539-36191584)
chr3 (1-41)||(8764294-8764334)
chr3 (8-81)||(19899682-19899755)
chr3 (4-44)||(44118226-44118266)
chr3 (1-37)||(48346500-48346536)
chr3 (1-37)||(19227358-19227394)
chr3 (10-46)||(27302120-27302156)
chr3 (1-37)||(27363211-27363247)
chr3 (6-41)||(6061149-6061184)
chr3 (1-44)||(45746533-45746576)
chr3 (1-44)||(51980450-51980493)
chr3 (1-46)||(16123818-16123863)
chr3 (21-74)||(50659962-50660015)
[»] chr1 (14 HSPs)
chr1 (1-91)||(19998473-19998563)
chr1 (1-44)||(51590492-51590535)
chr1 (1-74)||(13321776-13321849)
chr1 (1-81)||(27687847-27687927)
chr1 (1-89)||(34174884-34174972)
chr1 (4-74)||(31050315-31050385)
chr1 (1-74)||(15699526-15699599)
chr1 (1-45)||(48565589-48565633)
chr1 (11-45)||(29438210-29438244)
chr1 (1-91)||(13770771-13770861)
chr1 (1-46)||(52279275-52279320)
chr1 (1-81)||(22182771-22182851)
chr1 (1-31)||(12175507-12175537)
chr1 (1-91)||(43850945-43851035)
[»] chr7 (22 HSPs)
chr7 (1-81)||(22618225-22618305)
chr7 (1-81)||(40234772-40234852)
chr7 (1-81)||(41487853-41487933)
chr7 (1-91)||(45025656-45025746)
chr7 (1-94)||(47484014-47484107)
chr7 (1-92)||(33901100-33901191)
chr7 (1-46)||(7999489-7999534)
chr7 (1-74)||(10674185-10674258)
chr7 (1-74)||(24164578-24164651)
chr7 (6-74)||(29559450-29559518)
chr7 (6-81)||(41088919-41088994)
chr7 (1-82)||(3633196-3633277)
chr7 (1-44)||(41395705-41395748)
chr7 (1-81)||(47612352-47612432)
chr7 (11-89)||(18064794-18064872)
chr7 (1-91)||(27320356-27320446)
chr7 (1-74)||(14543330-14543403)
chr7 (1-41)||(28248493-28248533)
chr7 (5-74)||(33039573-33039642)
chr7 (1-44)||(7456462-7456505)
chr7 (1-44)||(45123307-45123350)
chr7 (4-41)||(13860264-13860300)
[»] chr8 (16 HSPs)
chr8 (1-92)||(43292630-43292721)
chr8 (1-88)||(29690498-29690585)
chr8 (1-90)||(34604843-34604932)
chr8 (1-89)||(40645708-40645796)
chr8 (1-96)||(35583945-35584040)
chr8 (1-44)||(34745319-34745362)
chr8 (1-81)||(43932055-43932135)
chr8 (1-79)||(38494301-38494379)
chr8 (11-73)||(45180111-45180173)
chr8 (1-45)||(38298543-38298587)
chr8 (1-81)||(7548503-7548583)
chr8 (11-91)||(45372777-45372857)
chr8 (6-81)||(43409840-43409915)
chr8 (1-79)||(13831883-13831961)
chr8 (1-45)||(9633143-9633187)
chr8 (9-44)||(9550152-9550187)
[»] scaffold0767 (1 HSPs)
scaffold0767 (1-74)||(3871-3944)
[»] chr4 (30 HSPs)
chr4 (1-46)||(31853129-31853174)
chr4 (4-81)||(29686406-29686483)
chr4 (1-74)||(54673372-54673445)
chr4 (1-81)||(52136705-52136785)
chr4 (1-46)||(9813497-9813542)
chr4 (4-81)||(4418162-4418239)
chr4 (1-94)||(33615841-33615934)
chr4 (1-45)||(52966437-52966481)
chr4 (1-81)||(25756718-25756798)
chr4 (1-81)||(54864126-54864206)
chr4 (1-73)||(35929072-35929143)
chr4 (11-81)||(32193481-32193551)
chr4 (4-44)||(1140930-1140970)
chr4 (1-44)||(1205144-1205187)
chr4 (1-81)||(7086193-7086273)
chr4 (11-91)||(38208321-38208401)
chr4 (1-44)||(40592755-40592798)
chr4 (1-81)||(43141772-43141852)
chr4 (10-81)||(25874771-25874842)
chr4 (10-81)||(37895261-37895332)
chr4 (1-43)||(42160035-42160077)
chr4 (6-81)||(56491078-56491153)
chr4 (1-91)||(50511241-50511331)
chr4 (16-81)||(1100902-1100967)
chr4 (2-95)||(19350604-19350696)
chr4 (1-41)||(23558952-23558992)
chr4 (1-74)||(35877376-35877449)
chr4 (1-81)||(36196371-36196451)
chr4 (1-31)||(24100821-24100851)
chr4 (1-46)||(8347533-8347578)
[»] chr6 (8 HSPs)
chr6 (1-45)||(8265034-8265078)
chr6 (6-81)||(2913400-2913475)
chr6 (1-46)||(29284539-29284584)
chr6 (1-45)||(359587-359631)
chr6 (1-41)||(9343182-9343222)
chr6 (1-40)||(26484331-26484370)
chr6 (1-46)||(12217532-12217577)
chr6 (10-46)||(30438814-30438850)
[»] chr2 (16 HSPs)
chr2 (1-74)||(15239705-15239778)
chr2 (1-46)||(28143786-28143831)
chr2 (1-46)||(41464776-41464821)
chr2 (4-88)||(6971635-6971719)
chr2 (13-81)||(45076416-45076484)
chr2 (6-81)||(25795244-25795319)
chr2 (1-76)||(27311588-27311663)
chr2 (1-46)||(3365316-3365361)
chr2 (6-41)||(11687521-11687556)
chr2 (1-81)||(40534519-40534599)
chr2 (4-46)||(14329203-14329245)
chr2 (1-45)||(36103435-36103479)
chr2 (1-45)||(38448980-38449024)
chr2 (1-46)||(23464537-23464582)
chr2 (1-37)||(9373444-9373480)
chr2 (1-41)||(11724332-11724372)
[»] chr5 (15 HSPs)
chr5 (1-81)||(20502149-20502229)
chr5 (11-81)||(29874323-29874393)
chr5 (10-91)||(7537092-7537173)
chr5 (1-74)||(38978804-38978877)
chr5 (11-70)||(29002759-29002818)
chr5 (1-74)||(13932523-13932596)
chr5 (1-74)||(29451955-29452027)
chr5 (1-88)||(35204985-35205072)
chr5 (1-88)||(35212087-35212174)
chr5 (1-37)||(19211342-19211378)
chr5 (1-81)||(5355613-5355693)
chr5 (1-40)||(13128255-13128294)
chr5 (1-81)||(13278948-13279028)
chr5 (11-91)||(24173416-24173496)
chr5 (1-44)||(32455182-32455225)
[»] scaffold0533 (1 HSPs)
scaffold0533 (8-74)||(3253-3319)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-46)||(40232-40277)
[»] scaffold0059 (1 HSPs)
scaffold0059 (1-81)||(26592-26672)
[»] scaffold0287 (1 HSPs)
scaffold0287 (1-82)||(12808-12889)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-74)||(112836-112909)
[»] scaffold0200 (1 HSPs)
scaffold0200 (1-81)||(25620-25700)


Alignment Details
Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 44034479 - 44034342
Alignment:
Q  86 gtatattttattatggtttttt-aatgaatgaggatcttaaaaaagtgttgtatctattcaaaattgtcacataattaacctattttcataaaaggttta 184  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44034479 gtatattttattatggtttttttaatgaatgaggatcttaaaaaagtgttgtatctattcaaaattgtcacataattaacctattttcataaaaggttta 44034380  T
Q  185 cacataactagaatgacataacatattcccgcattcat 222  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44034379 cacataactagaatgacataacatattcccgcattcat 44034342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39616997 - 39616917
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||       |||| |||||||||||||||| ||||||    
T  39616997 atcttgttataaatatagactagatacatcacttacataatgaaccttaaaagtcaaatgtttcttataataaggaccgga 39616917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 53703792 - 53703884
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaa-ttgtttcttataataagaaccggatgaagtatatt 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       |||| || |||||||||||||| |||||| | ||||||||    
T  53703792 atcttgttataaatatagactagatacatcacttacacaatgaacctaaaaggtcaacttttttcttataataaggaccggagggagtatatt 53703884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 45113820 - 45113747
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||| || |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  45113820 atcttattgtaaatatagactagatacatcacttacacaatgaaccaaaaaaatcaattgtttcttataataag 45113747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31376261 - 31376181
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||       |||| |||||||||||||||| ||||||    
T  31376261 atcttcttataaatatagactagatacatcacttacataatgaacctaaaaagtcaaatgtttcttataataaggaccgga 31376181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8769196 - 8769240
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaac 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  8769196 atcttgttataaatatagattagatacatcacttacacaatgaac 8769240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 50100280 - 50100207
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||    
T  50100280 atcttattataaatatagactagatacatcacttatacaatgaactaaaaaagtcaattgtttcttataataag 50100207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 53284378 - 53284466
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtat 89  Q
    ||||| || ||||| |||||||||||||||||||| ||||| ||||       ||||||||||||||||||||| |||||| |||||||    
T  53284378 atcttattgtaaatgtagactagatacatcacttatacaataaaccaaaaaaatcaattgtttcttataataaggaccggaggaagtat 53284466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 48643685 - 48643610
Alignment:
Q  6 gttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||||||||||||||||||| |||||||| || ||||       ||||||||||||||||||||| ||||||    
T  48643685 gttataaatatagactagatacattacttacacgattaacctaaaaagtcaattgtttcttataataaggaccgga 48643610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25313364 - 25313319
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  25313364 atctcgttataaatatagactaaatacatcacttacacaatgaacc 25313319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36191539 - 36191584
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  36191539 atcttgttatatatatagactagatacatcacttacataatgaacc 36191584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8764294 - 8764334
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaat 41  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  8764294 atcttgttataaatatagattagatacatcacttacacaat 8764334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 19899682 - 19899755
Alignment:
Q  8 tataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||| ||||||||||||||||||| ||||||||||||||       |||||||||| |||||||||| ||||||    
T  19899682 tatatatatagactagatacatcatttacacaatgaacctatagagtcaattgttttttataataaggaccgga 19899755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 44118266 - 44118226
Alignment:
Q  4 ttgttataaatatagactagatacatcacttacacaatgaa 44  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  44118266 ttgttataaatatagactagatacatcatttacacaatgaa 44118226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 48346536 - 48346500
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttaca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  48346536 atcttgttataaatatagactagatacatcacttaca 48346500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19227394 - 19227358
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttaca 37  Q
    ||||||||||||||||||||||||||||||| |||||    
T  19227394 atcttgttataaatatagactagatacatcatttaca 19227358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 27302156 - 27302120
Alignment:
Q  10 taaatatagactagatacatcacttacacaatgaacc 46  Q
    |||||||||||||||||||||||||| ||||||||||    
T  27302156 taaatatagactagatacatcacttatacaatgaacc 27302120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27363247 - 27363211
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttaca 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  27363247 atcttgttataaatatagattagatacatcacttaca 27363211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 6061149 - 6061184
Alignment:
Q  6 gttataaatatagactagatacatcacttacacaat 41  Q
    |||||||||||| |||||||||||||||||||||||    
T  6061149 gttataaatatatactagatacatcacttacacaat 6061184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45746533 - 45746576
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaa 44  Q
    |||| |||||||||||||||||||| ||||||||||||| ||||    
T  45746533 atctcgttataaatatagactagatccatcacttacacattgaa 45746576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51980450 - 51980493
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaa 44  Q
    |||| |||||||||||| |||||||| |||||||||||||||||    
T  51980450 atctcgttataaatataaactagatatatcacttacacaatgaa 51980493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16123818 - 16123863
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    ||||| || |||||||||||||||||||| ||||| ||||||||||    
T  16123818 atcttattgtaaatatagactagatacattacttatacaatgaacc 16123863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 50660015 - 50659962
Alignment:
Q  21 tagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||||||||||||||||||||||||       |||||||||||| ||||||||    
T  50660015 tagatacatcacttacacaatgaaccaaaaaaatcaattgtttctaataataag 50659962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 19998473 - 19998563
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatat 91  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |       ||||||||||||||||||||| ||||||||||||||||    
T  19998473 atcttgttgtaaatatagactagatacatcacttacacaatgaatctaaaaattcaattgtttcttataataaggaccggatgaagtatat 19998563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51590492 - 51590535
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaa 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  51590492 atcttgttataaatatagactagatacatcacttacacaatgaa 51590535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13321776 - 13321849
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |       |||| ||||||||||||||||    
T  13321776 atcttgttataaatatagactagatacatcacttacataatgaatctaaaaaatcaaatgtttcttataataag 13321849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 27687927 - 27687847
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||| || |||||||||||||||||||||||||||| |||||||        |||||| |||||||||||||||||||||    
T  27687927 atcttattgtaaatatagactagatacatcacttacataatgaactaaaaaattcaattatttcttataataagaaccgga 27687847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34174972 - 34174884
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtat 89  Q
    ||||||||  ||||||| |||| |||||||||||||||||||||||       ||||||||||||||||||||| | |||||| |||||    
T  34174972 atcttgttgcaaatataaactaaatacatcacttacacaatgaacctaaaaagtcaattgtttcttataataaggatcggatggagtat 34174884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 31050315 - 31050385
Alignment:
Q  4 ttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||       |||||||||||||||||||||    
T  31050315 ttgttgtaaatatagactaaatacatcacttacacaataaacctaaaaagtcaattgtttcttataataag 31050385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15699526 - 15699599
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||       ||||||||||| |||||||||    
T  15699526 atcttgttgtaaatatagactagatacatcacttatacaataaacctaaaaattcaattgtttcatataataag 15699599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48565589 - 48565633
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaac 45  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||    
T  48565589 atcttgttataaatatagactaaatacatcacctacacaatgaac 48565633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 29438210 - 29438244
Alignment:
Q  11 aaatatagactagatacatcacttacacaatgaac 45  Q
    |||||||||||||||||||||||||||||||||||    
T  29438210 aaatatagactagatacatcacttacacaatgaac 29438244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13770771 - 13770861
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatat 91  Q
    ||||| || |||||||||||||||||||||||||||||||| ||         | || ||||||||||||||||||||||| | |||||||    
T  13770771 atcttattgtaaatatagactagatacatcacttacacaataaattaaaaaagtaaactgtttcttataataagaaccggagggagtatat 13770861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 52279320 - 52279275
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    ||||| || |||||||||||| ||||||||||||||||||||||||    
T  52279320 atcttattgtaaatatagacttgatacatcacttacacaatgaacc 52279275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22182851 - 22182771
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||| ||||||||||| | |||||||||||||||||||||| || |       ||||||||| ||||||||||| ||||||    
T  22182851 atctcgttataaatatgggctagatacatcacttacacaataaatctaaaaagtcaattgttacttataataaggaccgga 22182771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 12175537 - 12175507
Alignment:
Q  1 atcttgttataaatatagactagatacatca 31  Q
    |||||||||||||||||||||||||||||||    
T  12175537 atcttgttataaatatagactagatacatca 12175507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 43851035 - 43850945
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatat 91  Q
    ||||||||||||||||| | ||||||||||||||||| ||| || |       ||||  ||||||||||||||  |||||| |||||||||    
T  43851035 atcttgttataaatatatattagatacatcacttacataataaatctaaaaagtcaaaagtttcttataataaagaccggaggaagtatat 43850945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22618225 - 22618305
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||||    
T  22618225 atcttgttgtaaatatagactagatacatcacttacacaatgaacctaaaaagtcaattgtttcttataataaggaccgga 22618305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40234852 - 40234772
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||| |||||||||||||||||||||| |||||||||||| |       ||||||||||||||||||||||||||||    
T  40234852 atcttgttgtaaatatagactagatacatcagttacacaatgaatctaaaaagtcaattgtttcttataataagaaccgga 40234772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41487853 - 41487933
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||| || |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||||    
T  41487853 atcttattgtaaatatagactagatacatcacttacacaatgaaccaaaaaaatcaattgtttcttataataaggaccgga 41487933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 45025656 - 45025746
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatat 91  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |       |||| |||||||||||||||  |||||| |||||||||    
T  45025656 atcttgttataaatatagactagatacatcacttacataatgaatctaaaaaatcaaatgtttcttataataaagaccggaggaagtatat 45025746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 47484107 - 47484014
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatatttt 94  Q
    ||||| || ||||||||||||||||||||||||||| |||||||         ||||||||||||||||||||| |||||||||||| ||||||    
T  47484107 atcttattgtaaatatagactagatacatcacttacgcaatgaataaaaaaaatcaattgtttcttataataaggaccggatgaagtgtatttt 47484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33901100 - 33901191
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatatt 92  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |       |||| |||||||||||||||  |||||| ||||||||||    
T  33901100 atcttgttataaatatagactagatacatcatttacataatgaatctaaaaagtcaaatgtttcttataataaagaccggaggaagtatatt 33901191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7999534 - 7999489
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  7999534 atctcgttataaatatagactagatacatcacttacacaatgaacc 7999489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10674185 - 10674258
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| |       |||||||||||||||||||||    
T  10674185 atcttgttataaatatagattagatacatcacttacataatgaatctaaaaagtcaattgtttcttataataag 10674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24164578 - 24164651
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||       |||| ||||||||||||||||    
T  24164578 atcttgttagaaatatagactagatacatcacttacataatgaacctaaaaagtcaaatgtttcttataataag 24164651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 29559518 - 29559450
Alignment:
Q  6 gttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    |||||||||||||||||||||||| |||||||| |||||||       |||||||||||||||||||||    
T  29559518 gttataaatatagactagatacattacttacacgatgaacctaaaaagtcaattgtttcttataataag 29559450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 41088919 - 41088994
Alignment:
Q  6 gttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||||||||||||||||||| |||||||| || ||||       ||||||||||||||||||||| ||||||    
T  41088919 gttataaatatagactagatacattacttacacgattaacctaaaaagtcaattgtttcttataataaggaccgga 41088994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3633277 - 3633196
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggat 82  Q
    |||| ||||||||| |||||||||||||||||||| | ||||||||       |||| |||||||||||||||| |||||||    
T  3633277 atctcgttataaatgtagactagatacatcacttaaataatgaacctaaaaagtcaaatgtttcttataataaggaccggat 3633196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41395748 - 41395705
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaa 44  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||    
T  41395748 atcttattataaatatagactagatacatcacttatacaatgaa 41395705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47612352 - 47612432
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||       ||||||| | ||||||||||| ||||||    
T  47612352 atctcgttataaatatagactagatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccgga 47612432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 18064794 - 18064872
Alignment:
Q  11 aaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtat 89  Q
    ||||||||||||||||||||||||| |||||||||        |||| ||||||||||| |||| |||||||| |||||    
T  18064794 aaatatagactagatacatcacttaaacaatgaactaaaaatgtcaactgtttcttatattaaggaccggatggagtat 18064872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 27320356 - 27320446
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatat 91  Q
    ||||| || ||||||||||||||| |||| ||||| ||||||||||       ||||||||||||||||||||| ||| || | |||||||    
T  27320356 atcttattgtaaatatagactagaaacattacttatacaatgaaccaaaaaaatcaattgtttcttataataaggaccagagggagtatat 27320446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14543330 - 14543403
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    |||||| | |||||||||||||||||||||||||||| ||| |||        |||||||||||||||||||||    
T  14543330 atcttgatgtaaatatagactagatacatcacttacataataaacttaaacaatcaattgtttcttataataag 14543403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28248493 - 28248533
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaat 41  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  28248493 atctcgttataaatatagactatatacatcacttacacaat 28248533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 33039642 - 33039573
Alignment:
Q  5 tgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    |||| ||||||||||||||||||||| || ||||||||||||       ||||||||||||| |||||||    
T  33039642 tgttgtaaatatagactagatacatccctaacacaatgaacctaaaaagtcaattgtttcttttaataag 33039573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7456505 - 7456462
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaa 44  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||    
T  7456505 atcttgttgtaaatatagactagatacatcatttatacaatgaa 7456462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45123307 - 45123350
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaa 44  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||    
T  45123307 atcttattataaatatagattagatacatcacttatacaatgaa 45123350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 13860300 - 13860264
Alignment:
Q  4 ttgttataaatatagactagatacatcacttacacaat 41  Q
    |||||||||||||||||||||||||||| |||||||||    
T  13860300 ttgttataaatatagactagatacatca-ttacacaat 13860264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 43292630 - 43292721
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatatt 92  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||       |||| |||||||||||||||| ||| |||| ||||||||    
T  43292630 atcttgttataaatatagactagatacatcacttacataatgaacctaaaaagtcaaatgtttcttataataaggaccagatggagtatatt 43292721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29690498 - 29690585
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagta 88  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||       | ||||||||||||||||||| |||||| ||||||    
T  29690498 atcttattataaatatagactagatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaagta 29690585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 34604843 - 34604932
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtata 90  Q
    ||||| || |||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||| |||||| | ||||||    
T  34604843 atcttattgtaaatatagactagatacatcacttatacaatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagtata 34604932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 40645796 - 40645708
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtat 89  Q
    ||||||||||||||||||||||||||||||||||||| |||||||        |||| |||||||||||||||| || ||| |||||||    
T  40645796 atcttgttataaatatagactagatacatcacttacataatgaacttaaaaagtcaaatgtttcttataataaggactggaggaagtat 40645708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 35583945 - 35584040
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatattttat 96  Q
    ||||| || |||||||||| ||||||||||||||| ||||||||||       | ||||||||||||||||||| |||||| | ||||||||||||    
T  35583945 atcttattgtaaatatagattagatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccggagggagtatattttat 35584040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34745319 - 34745362
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaa 44  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  34745319 atcttgttataaatatagactagatacatcacttacataatgaa 34745362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43932135 - 43932055
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||||||||||||||||| ||||||||||| ||  ||||||||||       ||||||||||||||||||||| ||||||    
T  43932135 atcttgttataaatatagattagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccgga 43932055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38494301 - 38494379
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccg 79  Q
    ||||||||||||||||| | |||||||| |||||||||||| ||||       |||||| |||||||||||||||||||    
T  38494301 atcttgttataaatataaattagatacaccacttacacaataaacctaaaaaatcaattttttcttataataagaaccg 38494379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 45180111 - 45180173
Alignment:
Q  11 aaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataa 73  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||    
T  45180111 aaatatagactagatacatcacttacacaatgaaccaaaaaagtcaattgttttttataataa 45180173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38298587 - 38298543
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaac 45  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||    
T  38298587 atctcgttataaatataggctagatacatcacttacacaatgaac 38298543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7548583 - 7548503
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||| || ||||||||| ||| |||||||||||||||||||||||       | ||||||||||||||||||| ||||||    
T  7548583 atcttattgtaaatatagtctaaatacatcacttacacaatgaaccaaaaaaattaattgtttcttataataaggaccgga 7548503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 45372777 - 45372857
Alignment:
Q  11 aaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatat 91  Q
    ||||||||||||||||||||||||||||| |||| |       ||||||||| ||||||||||| |||||| | |||||||    
T  45372777 aaatatagactagatacatcacttacacattgaatcaaaaaagtcaattgttacttataataaggaccggagggagtatat 45372857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 43409915 - 43409840
Alignment:
Q  6 gttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||||||||||||||||||| ||||| ||||||||||       ||||||| | ||||||||||| ||||||    
T  43409915 gttataaatatagactagatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccgga 43409840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13831961 - 13831883
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccg 79  Q
    ||||| || ||||||||||||| |||||||||||| ||||||||||       | ||||||||||||||||||| ||||    
T  13831961 atcttattgtaaatatagactatatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccg 13831883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9633143 - 9633187
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaac 45  Q
    |||||||||||||||||||||||||||||   |||||||||||||    
T  9633143 atcttgttataaatatagactagatacattgtttacacaatgaac 9633187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 9550187 - 9550152
Alignment:
Q  9 ataaatatagactagatacatcacttacacaatgaa 44  Q
    |||||||||||||||||||||||||||| |||||||    
T  9550187 ataaatatagactagatacatcacttacccaatgaa 9550152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3871 - 3944
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  3871 atctcgttataaatatagactagatacatcacttacacaatgaacctaaaaagtcaattgtttcttataataag 3944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31853129 - 31853174
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31853129 atcttgttataaatatagactagatacatcacttacacaatgaacc 31853174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 29686483 - 29686406
Alignment:
Q  4 ttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||||||||||||||||||||||| ||||||||||||||       |||| |||||||||||||||| ||||||    
T  29686483 ttgttataaatatagactagatacatcatttacacaatgaacctaaaaagtcaaatgtttcttataataaggaccgga 29686406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 54673372 - 54673445
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||    
T  54673372 atctcgttataaatatagactagatacatcacttacataatgaacctaaaaagtcaattgtttcttataataag 54673445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 52136785 - 52136705
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||||||||||||||||| |||||||||||||||||||||||       | |||| |||||||||||||| ||||||    
T  52136785 atcttgttataaatatagactaaatacatcacttacacaatgaacctaaaaagttaattttttcttataataaggaccgga 52136705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9813542 - 9813497
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  9813542 atctcgttataaatatagactagatacatcacttacacaatgaacc 9813497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 4418162 - 4418239
Alignment:
Q  4 ttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||||||||| |||| |||||||||||||||||||||||       |||||| |||||||||||||| ||||||    
T  4418162 ttgttataaatataaactaaatacatcacttacacaatgaacctaaaaaatcaattttttcttataataaggaccgga 4418239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33615841 - 33615934
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatatttt 94  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |       |||||||||| |||||||||| |||||| | ||||| ||||    
T  33615841 atcttattgtaaatatagactagatacatcacttacacaatgaatctaaaaattcaattgttttttataataaggaccggagggagtatgtttt 33615934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 52966481 - 52966437
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaac 45  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  52966481 atcttgttataaatatagactagatacatcacttatacaatgaac 52966437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25756798 - 25756718
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||       |||||| |||||||||||||| ||||||    
T  25756798 atctcgttataaatagagactagatacatcacttacacagtgaacctaaaaagtcaattatttcttataataaggaccgga 25756718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 54864126 - 54864206
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||| || |||||||||||||||||||||||||| ||||||||||       | ||||||||||||||||||| ||||||    
T  54864126 atcttattgtaaatatagactagatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccgga 54864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35929072 - 35929143
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataa 73  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||       ||||||||||||||||||||    
T  35929072 atcttattataaatatagattagatacatcacttacacaatgaacc-aaaaaatcaattgtttcttataataa 35929143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 32193551 - 32193481
Alignment:
Q  11 aaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||||||||||||||||| ||||||| ||||||||       ||||||||||||||||||||| ||||||    
T  32193551 aaatatagactagatacattacttacataatgaaccaaaaaagtcaattgtttcttataataaggaccgga 32193481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 1140930 - 1140970
Alignment:
Q  4 ttgttataaatatagactagatacatcacttacacaatgaa 44  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  1140930 ttgttataaatatagaccagatacatcacttacacaatgaa 1140970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1205144 - 1205187
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaa 44  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||    
T  1205144 atcttattataaatatagactagatacatcacttagacaatgaa 1205187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7086193 - 7086273
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||| ||||||||| ||||| |||||||||||||| ||||||||||       |||| |||||||||||||||| ||||||    
T  7086193 atctcgttataaatgtagaccagatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccgga 7086273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 38208321 - 38208401
Alignment:
Q  11 aaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatat 91  Q
    ||||||||||||||||||||||||| |||||||||        |||||||||||||||| |||| |||||| | |||||||    
T  38208321 aaatatagactagatacatcacttaaacaatgaactaaaaatgtcaattgtttcttatattaaggaccggagggagtatat 38208401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40592798 - 40592755
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaa 44  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||    
T  40592798 atcttgttataaatataaactagatacatcacttatacaatgaa 40592755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43141852 - 43141772
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||| || |||||||||| ||||||||||||||| ||||||||||       | ||||||||||||||||||| ||||||    
T  43141852 atcttattgtaaatatagattagatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccgga 43141772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 25874771 - 25874842
Alignment:
Q  10 taaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||||||||||||||||||||| ||||||||||       | |||| |||||||||||||| ||||||    
T  25874771 taaatatagactagatacatcacttatacaatgaaccaaaaaaattaattctttcttataataaggaccgga 25874842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 37895332 - 37895261
Alignment:
Q  10 taaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||| |||||||||||||||||||| ||||||||||       |||| |||||||||||||||| ||||||    
T  37895332 taaatgtagactagatacatcacttatacaatgaaccaaaaaaatcaactgtttcttataataaggaccgga 37895261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42160035 - 42160077
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatga 43  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  42160035 atcttgttataaatatagactaaatacatcacttacataatga 42160077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 56491153 - 56491078
Alignment:
Q  6 gttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||||||||||||||||||| ||||| ||||||||||       ||||||| | ||||||||||| ||||||    
T  56491153 gttataaatatagactagatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccgga 56491078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 50511331 - 50511241
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatat 91  Q
    ||||| || ||||||||| ||| |||||||||||||||||||||||       | ||||||||||||||||||  |||||| ||| |||||    
T  50511331 atcttattgtaaatatagtctaaatacatcacttacacaatgaaccaaaaaagttaattgtttcttataataaagaccggaagaaatatat 50511241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 1100967 - 1100902
Alignment:
Q  16 tagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||||||||||||||| ||||||||||       |||| |||||||||||||||| ||||||    
T  1100967 tagactagatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccgga 1100902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 19350696 - 19350604
Alignment:
Q  2 tcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatatttta 95  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||       | ||||||||||||||||||  | |||| ||||||| |||||    
T  19350696 tcttattataaataaagactagatac-tcacttacacaatgaaccaaaaaaattaattgtttcttataataaagatcggaggaagtatttttta 19350604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23558992 - 23558952
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaat 41  Q
    |||| |||||||||||||||||||||||||| |||||||||    
T  23558992 atctcgttataaatatagactagatacatcagttacacaat 23558952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35877376 - 35877449
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||| || ||||||||| ||| |||||||||||||||||||||||       | |||||||||||||||||||    
T  35877376 atcttattgtaaatatagtctaaatacatcacttacacaatgaaccaaaaaaattaattgtttcttataataag 35877449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36196451 - 36196371
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||| || ||||| ||||||| |||||||||||| | ||||||||       ||||||||||||||||||||| ||||||    
T  36196451 atcttattgtaaatgtagactatatacatcacttataaaatgaaccaaaaaaatcaattgtttcttataataaggaccgga 36196371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 24100821 - 24100851
Alignment:
Q  1 atcttgttataaatatagactagatacatca 31  Q
    |||||||||||||||||||||||||||||||    
T  24100821 atcttgttataaatatagactagatacatca 24100851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8347578 - 8347533
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    ||||| || |||||||||||||||||||||| ||| ||||||||||    
T  8347578 atcttattgtaaatatagactagatacatcatttatacaatgaacc 8347533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8265034 - 8265078
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaac 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8265034 atcttgttataaatatagactagatacatcacttacacaatgaac 8265078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 2913400 - 2913475
Alignment:
Q  6 gttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||||||||||||||||||| ||||| ||||||||||       ||||||||| ||||||||||| ||||||    
T  2913400 gttataaatatagactagatacattacttatacaatgaacctaaaaagtcaattgttgcttataataaggaccgga 2913475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29284584 - 29284539
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||    
T  29284584 atctcgttataaatatagactagatacatcacttacataatgaacc 29284539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 359631 - 359587
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaac 45  Q
    |||| |||||||||||||| |||||||||||||||||||||||||    
T  359631 atctcgttataaatatagattagatacatcacttacacaatgaac 359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9343182 - 9343222
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaat 41  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  9343182 atcttgttataaatatagactagatacattatttacacaat 9343222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26484370 - 26484331
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaa 40  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  26484370 atcttgttataaatatagactacatacatcatttacacaa 26484331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12217577 - 12217532
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    ||||| || |||||||||||||||||||||||||| ||||| ||||    
T  12217577 atcttattgtaaatatagactagatacatcacttatacaataaacc 12217532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 30438814 - 30438850
Alignment:
Q  10 taaatatagactagatacatcacttacacaatgaacc 46  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  30438814 taaatatagactagatacatcacttatacaataaacc 30438850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15239778 - 15239705
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||| || |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  15239778 atcttattgtaaatatagactagatacatcacttacacaatgaaccaacaaaatcaattgtttcttataataag 15239705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28143831 - 28143786
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  28143831 atcttattataaatatagactagatacatcacttacacaatgaacc 28143786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41464776 - 41464821
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  41464776 atctcgttataaatatagactagatacatcacttacacaatgaacc 41464821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 6971635 - 6971719
Alignment:
Q  4 ttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagta 88  Q
    |||||||||||||||| ||||||||||| ||||||||||||||       |||| |||||||||||||||| || ||| ||||||    
T  6971635 ttgttataaatatagattagatacatcatttacacaatgaacctaaaaagtcaaatgtttcttataataaggacaggaggaagta 6971719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 45076416 - 45076484
Alignment:
Q  13 atatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||||||||||||||||||||||||||||||||       |||||||||| |||||||||| ||||||    
T  45076416 atatagactagatacatcacttacacaatgaaccaaaaaagtcaattgttttttataataaggaccgga 45076484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 25795319 - 25795244
Alignment:
Q  6 gttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||||||||||||||||||| |||||||| || ||||       ||||||||||||||||||||| ||||||    
T  25795319 gttataaatatagactagatacattacttacacgattaacctaaaaagtcaattgtttcttataataaggaccgga 25795244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27311663 - 27311588
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaa 76  Q
    |||||||||||||||||||||||||| |||| ||  ||||||||||       |||||||||||||||||||||||    
T  27311663 atcttgttataaatatagactagatatatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagaa 27311588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3365361 - 3365316
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  3365361 atcttgttataaatatagattagatacatcacttatacaatgaacc 3365316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 11687556 - 11687521
Alignment:
Q  6 gttataaatatagactagatacatcacttacacaat 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  11687556 gttataaatatagactagatacatcacttacacaat 11687521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40534599 - 40534519
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||| || |||||||||||||||||||||| ||| |||||||||        ||||||||||||||||||||| ||||||    
T  40534599 atcttattgtaaatatagactagatacatcatttatacaatgaactaaaaaaatcaattgtttcttataataaggaccgga 40534519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 14329203 - 14329245
Alignment:
Q  4 ttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  14329203 ttgttataaatatagatcagatacatcacttacacaatgaacc 14329245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36103479 - 36103435
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaac 45  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||    
T  36103479 atcttattgtaaatatagtctagatacatcacttacacaatgaac 36103435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38449024 - 38448980
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaac 45  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||    
T  38449024 atcttgtgataaatatagatcagatacatcacttacacaatgaac 38448980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23464582 - 23464537
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    ||||| || ||||||||||||||||||||| |||| ||||||||||    
T  23464582 atcttattgtaaatatagactagatacatctcttatacaatgaacc 23464537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9373480 - 9373444
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttaca 37  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  9373480 atcttgttgtaaatatagactacatacatcacttaca 9373444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11724332 - 11724372
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaat 41  Q
    |||| ||||||||||||||||||||| || |||||||||||    
T  11724332 atctcgttataaatatagactagatatattacttacacaat 11724372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20502149 - 20502229
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||| || |||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||| ||||||    
T  20502149 atcttattgtaaatatagactagatacatcacttacacaatgaaccaaaaaaattaattgtttcttataataaggaccgga 20502229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 29874393 - 29874323
Alignment:
Q  11 aaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||||||||||||||||||||||| ||||||||||       |||||||||||||||| |||||||||||    
T  29874393 aaatatagactagatacatcacttaaacaatgaaccaaaaaagtcaattgtttcttatattaagaaccgga 29874323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 7537092 - 7537173
Alignment:
Q  10 taaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatat 91  Q
    |||||||| ||||||||||||||||||||||||||||       |||||||||| |||||||||| |||||| | |||||||    
T  7537092 taaatatatactagatacatcacttacacaatgaaccaaaaaaatcaattgttttttataataaggaccggagggagtatat 7537173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38978804 - 38978877
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||| || |||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||    
T  38978804 atcttattgtaaatatagactagatacatcacttacacaatgaaccaaaaaaattaattgtttcttataataag 38978877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 29002818 - 29002759
Alignment:
Q  11 aaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataa 70  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  29002818 aaatatagactagatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 29002759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13932523 - 13932596
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||       |||||| ||||||||||||||    
T  13932523 atctcgttataaatagagactagatacatcacttacacagtgaacctaaaaagtcaattatttcttataataag 13932596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29451955 - 29452027
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  29451955 atcttattgtaaatatatactagatacatcacttacacaatgaacc-aaaaaatcaattgtttcttataataag 29452027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35204985 - 35205072
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagta 88  Q
    ||||| || ||||||||| ||||||||||| ||||||||||||||        ||||||||||||||||||||  | |||||||||||    
T  35204985 atcttattgtaaatatagtctagatacatcccttacacaatgaactaaaaaagtcaattgtttcttataataaagatcggatgaagta 35205072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 35212174 - 35212087
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagta 88  Q
    ||||| || ||||||||| ||||||||||| ||||||||||||||        ||||||||||||||||||||  | |||||||||||    
T  35212174 atcttattgtaaatatagtctagatacatcccttacacaatgaactaaaaaagtcaattgtttcttataataaagatcggatgaagta 35212087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19211342 - 19211378
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttaca 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  19211342 atcttgttgtaaatatagactagatacatcacttaca 19211378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5355613 - 5355693
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||| || |||||||| |||| ||||||||||||||||||||||        |||| |||||||||||||||| ||||||    
T  5355613 atcttattgtaaatataaactaaatacatcacttacacaatgaactaaaaaagtcaactgtttcttataataaggaccgga 5355693  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13128255 - 13128294
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaa 40  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  13128255 atctcgttataaatatagactagatgcatcacttacacaa 13128294  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13278948 - 13279028
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||| |||||||||||| | ||||||||||||||||||||| || |       |||| |||||||||||||||| ||||||    
T  13278948 atctcgttataaatataaattagatacatcacttacacaataaatctaaaaagtcaactgtttcttataataaggaccgga 13279028  T

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Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 24173496 - 24173416
Alignment:
Q  11 aaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggatgaagtatat 91  Q
    ||||||||| |||||||||||||||||||||||||        |||||| |||||||||||||| || ||| | |||||||    
T  24173496 aaatatagattagatacatcacttacacaatgaactaaaaaaatcaattatttcttataataaggactggagggagtatat 24173416  T

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Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32455225 - 32455182
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaa 44  Q
    ||||| || ||||||||||||||||||||||||| |||||||||    
T  32455225 atcttattgtaaatatagactagatacatcacttccacaatgaa 32455182  T

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Target: scaffold0533 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 3319 - 3253
Alignment:
Q  8 tataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  3319 tataaatatagactagatacatcacttacacaatgaacataaaaagtcaattgtttcttataataag 3253  T

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Target: scaffold0110 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40277 - 40232
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaacc 46  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  40277 atcttgttgtaaatatagactagatacatcacttacacaatgaacc 40232  T

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Target: scaffold0059 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26672 - 26592
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||       |||||  |||||||||||||| ||||||    
T  26672 atcttgttgtaaatatagactagatacatcacttacataatgaacctaaaaagtcaatcctttcttataataaggaccgga 26592  T

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Target: scaffold0287 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12808 - 12889
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccggat 82  Q
    |||| ||||||||| |||||||||||||||||||| | ||||||||       |||| |||||||||||||||| |||||||    
T  12808 atctcgttataaatgtagactagatacatcacttaaataatgaacctaaaaagtcaaatgtttcttataataaggaccggat 12889  T

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Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 112909 - 112836
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataag 74  Q
    ||||||||||||||||||| ||||||||||| ||  ||||||||||       |||||||||||||||||||||    
T  112909 atcttgttataaatatagattagatacatcatttgtacaatgaacctaaaacgtcaattgtttcttataataag 112836  T

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Target: scaffold0200 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25700 - 25620
Alignment:
Q  1 atcttgttataaatatagactagatacatcacttacacaatgaaccnnnnnnntcaattgtttcttataataagaaccgga 81  Q
    ||||| ||||||||||||||||||||||||||||| | ||| ||||       | |||||||| |||||||||| ||||||    
T  25700 atcttattataaatatagactagatacatcacttatataataaaccaaaaaagttaattgttttttataataaggaccgga 25620  T

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