View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13426_low_12 (Length: 235)

Name: NF13426_low_12
Description: NF13426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13426_low_12
NF13426_low_12
[»] chr5 (42 HSPs)
chr5 (1-235)||(35445778-35446013)
chr5 (80-235)||(39105444-39105601)
chr5 (80-235)||(7674628-7674783)
chr5 (80-235)||(12425551-12425709)
chr5 (115-235)||(7984984-7985105)
chr5 (119-235)||(10639972-10640089)
chr5 (80-235)||(16937817-16937973)
chr5 (100-235)||(43300878-43301014)
chr5 (81-152)||(10272449-10272520)
chr5 (165-235)||(11064732-11064802)
chr5 (84-235)||(11700146-11700298)
chr5 (87-152)||(36325998-36326063)
chr5 (115-223)||(42500189-42500296)
chr5 (80-145)||(42582892-42582957)
chr5 (87-191)||(2568645-2568749)
chr5 (171-235)||(9107162-9107226)
chr5 (80-180)||(41957441-41957541)
chr5 (80-151)||(7319386-7319457)
chr5 (115-213)||(29925856-29925955)
chr5 (114-229)||(36882055-36882170)
chr5 (80-213)||(16457935-16458069)
chr5 (114-235)||(42100325-42100447)
chr5 (178-235)||(15015922-15015979)
chr5 (87-152)||(36318761-36318826)
chr5 (1-65)||(42500337-42500399)
chr5 (80-235)||(9202682-9202838)
chr5 (81-153)||(29588860-29588932)
chr5 (82-181)||(6587096-6587195)
chr5 (176-235)||(32010022-32010081)
chr5 (165-224)||(32942660-32942719)
chr5 (125-186)||(3977333-3977394)
chr5 (115-152)||(4014442-4014479)
chr5 (170-235)||(7705932-7705997)
chr5 (115-191)||(17368691-17368767)
chr5 (175-228)||(32941545-32941598)
chr5 (115-187)||(37954701-37954774)
chr5 (159-216)||(39248158-39248215)
chr5 (2-61)||(15015748-15015808)
chr5 (82-174)||(25461312-25461404)
chr5 (85-145)||(28776978-28777038)
chr5 (38-86)||(32703601-32703649)
chr5 (80-152)||(39594787-39594859)
[»] chr2 (57 HSPs)
chr2 (80-227)||(18066108-18066256)
chr2 (80-235)||(1625880-1626036)
chr2 (100-227)||(26202028-26202156)
chr2 (118-235)||(7928232-7928351)
chr2 (80-234)||(41851515-41851670)
chr2 (100-227)||(43279469-43279599)
chr2 (87-197)||(43984976-43985086)
chr2 (115-208)||(12313135-12313228)
chr2 (172-235)||(44590097-44590160)
chr2 (80-186)||(680483-680589)
chr2 (83-235)||(29628676-29628830)
chr2 (115-216)||(36534783-36534885)
chr2 (80-233)||(39659445-39659599)
chr2 (165-235)||(42419859-42419929)
chr2 (115-235)||(750685-750806)
chr2 (115-235)||(4606940-4607061)
chr2 (170-235)||(10619154-10619219)
chr2 (170-235)||(27317450-27317515)
chr2 (81-186)||(33941890-33941995)
chr2 (80-152)||(1810645-1810716)
chr2 (126-235)||(2142680-2142790)
chr2 (165-235)||(19608567-19608637)
chr2 (165-235)||(42659145-42659215)
chr2 (170-235)||(15757592-15757657)
chr2 (80-181)||(29316764-29316865)
chr2 (178-227)||(30331830-30331879)
chr2 (83-144)||(35378690-35378750)
chr2 (80-153)||(40279177-40279250)
chr2 (124-235)||(15305698-15305810)
chr2 (100-215)||(16451118-16451234)
chr2 (115-187)||(18179223-18179295)
chr2 (80-144)||(26626853-26626917)
chr2 (171-227)||(31744370-31744426)
chr2 (156-208)||(32837379-32837431)
chr2 (83-191)||(35378511-35378619)
chr2 (1-84)||(41812202-41812283)
chr2 (172-235)||(2416386-2416449)
chr2 (115-186)||(3067363-3067434)
chr2 (133-208)||(6993686-6993761)
chr2 (119-217)||(7035519-7035618)
chr2 (115-186)||(35379000-35379071)
chr2 (88-174)||(1893277-1893363)
chr2 (170-235)||(36125432-36125495)
chr2 (133-191)||(43529837-43529895)
chr2 (159-208)||(5902511-5902560)
chr2 (90-151)||(9477942-9478003)
chr2 (87-152)||(16353848-16353913)
chr2 (115-208)||(24347737-24347830)
chr2 (127-223)||(40682341-40682438)
chr2 (115-227)||(42457963-42458076)
chr2 (1-38)||(42659263-42659300)
chr2 (115-235)||(45229526-45229647)
chr2 (199-235)||(3312177-3312213)
chr2 (81-153)||(11513879-11513951)
chr2 (80-152)||(12464491-12464563)
chr2 (87-187)||(34102005-34102105)
chr2 (120-208)||(41041984-41042072)
[»] chr6 (29 HSPs)
chr6 (82-223)||(20368127-20368268)
chr6 (80-235)||(31624238-31624396)
chr6 (88-235)||(13907573-13907719)
chr6 (81-188)||(34430442-34430550)
chr6 (82-235)||(6536597-6536748)
chr6 (128-235)||(34404660-34404767)
chr6 (118-191)||(31624108-31624181)
chr6 (115-227)||(31813176-31813289)
chr6 (82-235)||(34910343-34910499)
chr6 (121-235)||(2455280-2455395)
chr6 (1-64)||(30536670-30536733)
chr6 (162-235)||(33089568-33089642)
chr6 (82-152)||(35070485-35070555)
chr6 (82-215)||(35099019-35099152)
chr6 (199-235)||(658463-658499)
chr6 (80-152)||(9093574-9093646)
chr6 (165-233)||(9559358-9559426)
chr6 (176-235)||(10645319-10645378)
chr6 (80-137)||(415284-415341)
chr6 (115-152)||(835267-835304)
chr6 (80-153)||(837233-837306)
chr6 (170-235)||(6538585-6538650)
chr6 (119-227)||(9912133-9912242)
chr6 (133-186)||(28641733-28641786)
chr6 (87-191)||(10616692-10616795)
chr6 (160-235)||(26559173-26559249)
chr6 (80-152)||(26694858-26694930)
chr6 (160-235)||(33887890-33887966)
chr6 (199-235)||(35069546-35069582)
[»] chr4 (46 HSPs)
chr4 (82-234)||(1706604-1706757)
chr4 (100-235)||(21731590-21731726)
chr4 (115-231)||(2244066-2244183)
chr4 (115-235)||(17822799-17822920)
chr4 (116-231)||(24169279-24169395)
chr4 (80-235)||(27043764-27043920)
chr4 (93-235)||(54426036-54426179)
chr4 (81-205)||(2996554-2996678)
chr4 (116-223)||(13126522-13126630)
chr4 (80-235)||(41336740-41336896)
chr4 (82-216)||(49202627-49202762)
chr4 (80-214)||(50681044-50681179)
chr4 (170-227)||(15173245-15173302)
chr4 (83-235)||(35571565-35571718)
chr4 (170-235)||(39691083-39691148)
chr4 (115-235)||(52315131-52315252)
chr4 (170-235)||(55437147-55437212)
chr4 (175-235)||(40174633-40174693)
chr4 (171-235)||(49940101-49940165)
chr4 (83-185)||(30066751-30066853)
chr4 (80-209)||(28300260-28300389)
chr4 (85-209)||(23819074-23819198)
chr4 (80-152)||(51630091-51630163)
chr4 (80-219)||(54069367-54069507)
chr4 (115-186)||(18011886-18011957)
chr4 (126-217)||(21523584-21523675)
chr4 (163-205)||(1408285-1408327)
chr4 (38-80)||(2702939-2702981)
chr4 (119-227)||(1312860-1312969)
chr4 (166-219)||(4304100-4304153)
chr4 (165-230)||(20719769-20719834)
chr4 (4-65)||(22030099-22030159)
chr4 (170-235)||(25904157-25904222)
chr4 (170-235)||(29657455-29657520)
chr4 (80-197)||(37863927-37864042)
chr4 (170-235)||(42403957-42404021)
chr4 (194-227)||(44797975-44798008)
chr4 (178-235)||(49003976-49004033)
chr4 (159-203)||(1554975-1555019)
chr4 (199-235)||(8705041-8705077)
chr4 (80-152)||(17884048-17884120)
chr4 (118-174)||(28615541-28615597)
chr4 (80-152)||(29388594-29388666)
chr4 (119-183)||(44249304-44249368)
chr4 (83-143)||(49940018-49940078)
chr4 (80-144)||(56480328-56480392)
[»] chr1 (59 HSPs)
chr1 (100-216)||(14443449-14443565)
chr1 (80-214)||(51695450-51695585)
chr1 (80-235)||(3233949-3234105)
chr1 (159-235)||(38001655-38001731)
chr1 (80-227)||(38018306-38018454)
chr1 (115-235)||(7941621-7941742)
chr1 (80-235)||(37842290-37842445)
chr1 (79-153)||(27820354-27820428)
chr1 (170-235)||(2295167-2295232)
chr1 (174-235)||(24334270-24334331)
chr1 (87-235)||(49938734-49938883)
chr1 (82-142)||(7069283-7069343)
chr1 (80-235)||(473144-473299)
chr1 (172-235)||(37617399-37617462)
chr1 (82-216)||(2777874-2778008)
chr1 (115-197)||(7136971-7137053)
chr1 (170-227)||(6557043-6557100)
chr1 (170-235)||(29904822-29904887)
chr1 (178-235)||(39976144-39976201)
chr1 (115-210)||(27820156-27820251)
chr1 (92-208)||(34290228-34290344)
chr1 (115-186)||(35925705-35925776)
chr1 (82-235)||(1432497-1432651)
chr1 (181-235)||(33204328-33204382)
chr1 (123-208)||(4445731-4445816)
chr1 (170-227)||(13810069-13810126)
chr1 (88-235)||(36514610-36514759)
chr1 (79-152)||(37631577-37631650)
chr1 (115-152)||(45975705-45975742)
chr1 (116-152)||(1232923-1232959)
chr1 (115-191)||(17778972-17779048)
chr1 (80-211)||(24915009-24915141)
chr1 (100-152)||(38503483-38503535)
chr1 (171-235)||(50644189-50644253)
chr1 (81-235)||(6292474-6292628)
chr1 (81-152)||(7218092-7218163)
chr1 (170-221)||(9572049-9572100)
chr1 (80-131)||(41505666-41505717)
chr1 (82-145)||(49888749-49888812)
chr1 (170-216)||(7119891-7119937)
chr1 (165-227)||(10233590-10233652)
chr1 (115-145)||(17778721-17778751)
chr1 (194-232)||(30192038-30192076)
chr1 (81-151)||(39596578-39596648)
chr1 (199-232)||(1684036-1684069)
chr1 (1-38)||(5741583-5741620)
chr1 (81-175)||(5886989-5887085)
chr1 (170-235)||(7244588-7244652)
chr1 (115-235)||(10199342-10199463)
chr1 (80-145)||(17603409-17603474)
chr1 (81-186)||(25479562-25479667)
chr1 (170-227)||(38247398-38247455)
chr1 (80-152)||(2294891-2294963)
chr1 (80-152)||(7472291-7472363)
chr1 (100-200)||(27140478-27140578)
chr1 (112-235)||(27146189-27146313)
chr1 (80-208)||(31517702-31517830)
chr1 (170-234)||(37517101-37517165)
chr1 (80-152)||(47432076-47432147)
[»] chr3 (43 HSPs)
chr3 (80-235)||(402476-402632)
chr3 (80-235)||(21367647-21367803)
chr3 (91-235)||(39602145-39602289)
chr3 (100-234)||(39980729-39980864)
chr3 (80-235)||(30443873-30444029)
chr3 (80-235)||(34610740-34610896)
chr3 (115-234)||(3845498-3845617)
chr3 (175-235)||(18405765-18405825)
chr3 (80-226)||(53789406-53789551)
chr3 (94-235)||(24085272-24085414)
chr3 (194-235)||(25447179-25447220)
chr3 (80-173)||(52618983-52619076)
chr3 (124-235)||(31365243-31365355)
chr3 (115-191)||(49465644-49465720)
chr3 (165-227)||(37389249-37389311)
chr3 (170-234)||(3776325-3776390)
chr3 (115-235)||(22667419-22667539)
chr3 (115-235)||(22724058-22724178)
chr3 (170-235)||(31365122-31365187)
chr3 (119-235)||(46031009-46031126)
chr3 (171-235)||(584118-584182)
chr3 (80-180)||(1217790-1217890)
chr3 (80-235)||(20880456-20880612)
chr3 (176-228)||(42799908-42799960)
chr3 (115-191)||(45541586-45541662)
chr3 (80-152)||(47132311-47132383)
chr3 (127-191)||(53952075-53952139)
chr3 (115-186)||(23808048-23808119)
chr3 (117-235)||(38902083-38902201)
chr3 (178-235)||(20170648-20170706)
chr3 (201-235)||(33405126-33405160)
chr3 (133-186)||(5391912-5391965)
chr3 (170-235)||(24684756-24684821)
chr3 (115-152)||(35394516-35394553)
chr3 (170-227)||(51929299-51929356)
chr3 (159-204)||(54837000-54837045)
chr3 (115-186)||(901939-902011)
chr3 (148-235)||(5436120-5436208)
chr3 (199-235)||(5448544-5448580)
chr3 (207-235)||(26911699-26911727)
chr3 (119-235)||(36507026-36507142)
chr3 (132-184)||(38318992-38319044)
chr3 (115-151)||(38665308-38665344)
[»] chr7 (36 HSPs)
chr7 (80-235)||(19302497-19302649)
chr7 (100-227)||(19022527-19022655)
chr7 (80-227)||(33678760-33678908)
chr7 (81-235)||(44821940-44822094)
chr7 (115-235)||(33601344-33601465)
chr7 (172-235)||(27863659-27863722)
chr7 (115-233)||(33601963-33602082)
chr7 (80-145)||(47177616-47177681)
chr7 (80-227)||(17944285-17944433)
chr7 (80-215)||(39907783-39907917)
chr7 (115-235)||(36517594-36517713)
chr7 (82-234)||(420342-420495)
chr7 (115-235)||(34035932-34036053)
chr7 (166-231)||(48140270-48140335)
chr7 (79-139)||(18350738-18350798)
chr7 (80-152)||(20269556-20269628)
chr7 (115-210)||(21568454-21568550)
chr7 (80-152)||(46280290-46280362)
chr7 (81-144)||(12110341-12110404)
chr7 (38-81)||(28900751-28900794)
chr7 (176-235)||(33266420-33266479)
chr7 (85-152)||(43648225-43648292)
chr7 (79-145)||(5569661-5569727)
chr7 (162-208)||(8094368-8094414)
chr7 (181-235)||(18765366-18765420)
chr7 (98-152)||(18962590-18962644)
chr7 (165-235)||(20526512-20526582)
chr7 (120-233)||(25670522-25670636)
chr7 (166-212)||(27288014-27288060)
chr7 (170-235)||(46280214-46280282)
chr7 (170-235)||(4970726-4970791)
chr7 (133-206)||(31338541-31338614)
chr7 (170-235)||(48470115-48470180)
chr7 (116-192)||(25130067-25130143)
chr7 (44-84)||(28210316-28210356)
chr7 (80-191)||(39967900-39968012)
[»] chr8 (39 HSPs)
chr8 (170-227)||(10758199-10758256)
chr8 (80-232)||(26771245-26771398)
chr8 (80-235)||(27028811-27028967)
chr8 (170-235)||(35534547-35534612)
chr8 (120-235)||(1058011-1058126)
chr8 (92-235)||(30251388-30251532)
chr8 (166-227)||(28763435-28763496)
chr8 (160-235)||(2487942-2488018)
chr8 (81-145)||(8062505-8062569)
chr8 (175-235)||(43717868-43717928)
chr8 (133-203)||(5069730-5069800)
chr8 (173-227)||(38648425-38648479)
chr8 (82-152)||(43504733-43504803)
chr8 (115-227)||(1930050-1930163)
chr8 (115-235)||(3536879-3537000)
chr8 (87-152)||(9956832-9956897)
chr8 (115-235)||(11376718-11376839)
chr8 (172-233)||(35749506-35749567)
chr8 (170-235)||(38750428-38750493)
chr8 (175-235)||(15180616-15180675)
chr8 (134-233)||(32840922-32841022)
chr8 (93-208)||(11415147-11415262)
chr8 (92-187)||(34290861-34290956)
chr8 (135-186)||(43368684-43368735)
chr8 (80-150)||(24558833-24558903)
chr8 (170-235)||(38602400-38602463)
chr8 (99-145)||(42622890-42622936)
chr8 (1-38)||(1058186-1058223)
chr8 (194-235)||(6525912-6525953)
chr8 (194-235)||(9130253-9130294)
chr8 (133-186)||(12851209-12851262)
chr8 (166-235)||(12976279-12976348)
chr8 (178-227)||(13821986-13822035)
chr8 (115-216)||(27754419-27754520)
chr8 (166-235)||(41589653-41589722)
chr8 (115-235)||(44236757-44236878)
chr8 (175-235)||(12497006-12497066)
chr8 (199-235)||(30657711-30657747)
chr8 (176-235)||(37822593-37822653)


Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 35446013 - 35445778
Alignment:
Q  1 taaaaatagcttatgtaatctt-atacattagcgcttatgtgttataagctgcaaataagttgtttgtccgaatagggcctaaattgttttcgtataagt 99  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35446013 taaaaatagcttatgtaagctttatacattagcgcttatgtgttataagctgcaaataagttgtttgtccgaatagggcctaaattgttttcgtataagt 35445914  T
Q  100 tataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaaga 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35445913 tataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaaga 35445814  T
Q  200 gtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||||||||||||||||||||||||    
T  35445813 gtctcacaaaacttatgtcagtagataaactcaaat 35445778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 39105444 - 39105601
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgt 178  Q
    ||||||||||||||||||| |||||  |||| |  ||||||||||||||||| ||||||||||||| | |||||  || |||||| |||| |||||||||    
T  39105444 taaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgt 39105543  T
Q  179 tttcataaattctatc-aaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||||  | ||| ||||||| |||||||||  |  |||||||||||||||    
T  39105544 tttcataaattctcccaaaaaagtctcataaaacttatacccctagataaactcaaat 39105601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 7674628 - 7674783
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtt 179  Q
    |||||||||||| ||||||  ||||  |||| |  |||||||||||||||||||| |||||||||| ||||||  ||| || ||||||| ||||| ||||    
T  7674628 taaattgttttcttataagccataaaatgttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtt 7674727  T
Q  180 ttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    | ||||| ||||  |||  |||||||||||||||| ||  |||||||| |||||||    
T  7674728 tccataagttcttccaagcagtctcacaaaacttaagtaggtagataagctcaaat 7674783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 12425551 - 12425709
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa-tgcctaatgaacatgttataagctgt 178  Q
    ||||||||||||||||||| |||||| |||| |   |||||||||||||||| ||||||||||||| ||||||   | || |||  ||||| || | |||    
T  12425551 taaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaacttattgacaatgttttaggttgt 12425650  T
Q  179 tttc--ataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||  |||| ||||  |||| |||||||||||||||||| |||||||||| |||||||    
T  12425651 tttcatataagttctcccaaacagtctcacaaaacttatgacagtagataagctcaaat 12425709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 7984984 - 7985105
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    ||||||||||||||||||||||||||||||| ||||||   || |||||| | || | ||||||||||| |||  |||  |||| ||||||||||| |||    
T  7984984 taagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaacgtcacaagctgttttcttaagctctcccaaatagtctcacaaagctt 7985083  T
Q  214 atgtcagtagataaactcaaat 235  Q
    ||| |||||||||| |||||||    
T  7985084 atgccagtagataatctcaaat 7985105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 10639972 - 10640089
Alignment:
Q  119 ctatcttggagaatttatgaaaataaggt-gaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgt 217  Q
    |||| |||||||| ||||||||||||| | ||||| || ||   || |||| ||||||||||||||||| ||||  |||| | | |||||||||||||||    
T  10639972 ctattttggagaacttatgaaaataagctagaaaaagcttatgaaaaatgtcataagctgttttcataagttctcccaaacaatatcacaaaacttatgt 10640071  T
Q  218 cagtagataaactcaaat 235  Q
    ||||||||||||||||||    
T  10640072 cagtagataaactcaaat 10640089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 16937973 - 16937817
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgt 178  Q
    ||||||||||| ||||| | |||||| |||| || || ||||| |||||||| ||| ||||||||| ||||||   || |||||  | || |||||||||    
T  16937973 taaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtcataagctgt 16937874  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||| ||||  |||| | ||||||||||||||||  ||||||||| |||||||    
T  16937873 tttcataagttcttccaaacactctcacaaaacttatgctagtagataagctcaaat 16937817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 235
Target Start/End: Original strand, 43300878 - 43301014
Alignment:
Q  100 tataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaa-atgcctaatgaacatgttataagctgttttcataaattctatcaaag 198  Q
    |||||| |||| |||||||||||||||||||| ||||||||||||| ||||| |||| ||   || |||| ||| |||||||| |||| ||||  | ||     
T  43300878 tataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaaacatgcttatataaaatgtcataggctgtttttataacttctccccaac 43300977  T
Q  199 agtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||| |||||||||| || || |||| |||||||    
T  43300978 agtctcataaaacttatgccattatataagctcaaat 43301014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 10272520 - 10272449
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    |||||||||||||||||| |||||| |||| |  ||||| |||||||||| |||||||||||||| ||||||    
T  10272520 aaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaa 10272449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 11064732 - 11064802
Alignment:
Q  165 atgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||| ||||||| ||||||||| |||| ||||| | |||||||||||||||||  ||||||||||||||||    
T  11064732 atgtcataagctattttcataagttctctcaaacaatctcacaaaacttatgttggtagataaactcaaat 11064802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 235
Target Start/End: Original strand, 11700146 - 11700298
Alignment:
Q  84 ttgttttcgtataag-ttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaa--atgcctaatgaaca-tgttataagctgtt 179  Q
    ||||||||||||||| ||||||| |||| |  || |||||| ||||||| ||||||||||||| |||||  ||   | ||||||| ||| ||||| ||||    
T  11700146 ttgttttcgtataagcttataagttgttttgatatgctatcgtggagaacttatgaaaataagatgaaacaat---ttatgaacaatgtcataagttgtt 11700242  T
Q  180 ttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    | ||||| |||| | ||| |||||||||||||||||| |||| ||||| |||||||    
T  11700243 tccataagttctgtgaaacagtctcacaaaacttatgccagtggataagctcaaat 11700298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 36325998 - 36326063
Alignment:
Q  87 ttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    |||| |||||||||||||| || | | |||||||||||||||||||||||| ||||||| ||||||    
T  36325998 tttttgtataagttataagttgctttcgtaagctatcttggagaatttatgtaaataagctgaaaa 36326063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 42500296 - 42500189
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    |||||||| |||||||| ||||||||||||| |||||| || || |||| || ||  |||| ||||| ||||| ||||  ||||||||||||||||||||    
T  42500296 taagctatattggagaacttatgaaaataagttgaaaaagctta-tgaaaattgtcgtaagttgtttccataagttctc-caaagagtctcacaaaactt 42500199  T
Q  214 atgtcagtag 223  Q
    ||||||||||    
T  42500198 atgtcagtag 42500189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 42582892 - 42582957
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataag 145  Q
    |||||||| ||||| |||| |||||| |||| ||||||||||| |||||||| |||||||||||||    
T  42582892 taaattgtgttcgtttaaggtataagctgtttttgtaagctatattggagaacttatgaaaataag 42582957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 191
Target Start/End: Original strand, 2568645 - 2568749
Alignment:
Q  87 ttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    |||||||||||| |||||| |||| |  ||||||||| ||||||  | ||||||||||| | |||||  || ||||| |||| |||||||||||||||||    
T  2568645 ttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataa 2568744  T
Q  187 attct 191  Q
     ||||    
T  2568745 gttct 2568749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 9107162 - 9107226
Alignment:
Q  171 taagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||||| | ||||  |||| | ||||||||||||||||||| |||||||||||||||    
T  9107162 taagctgttttcatgagttctcccaaacattctcacaaaacttatgtcactagataaactcaaat 9107226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 41957541 - 41957441
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtt 179  Q
    |||||||||||| | ||||||||||| |||| |  ||||||||| | ||||| ||||||||||||| ||||||   || ||| |||||| ||||||||||    
T  41957541 taaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgtt 41957442  T
Q  180 t 180  Q
    |    
T  41957441 t 41957441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 7319386 - 7319457
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaa 151  Q
    |||||||||||| |||||| |||||  |||| | |||||||||||||||||| |||| |||||||| |||||    
T  7319386 taaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataagctgaaa 7319457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 29925856 - 29925955
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    |||||||| |||||||| ||||||||||||| ||||||   |  ||||||| ||| ||||||||||||||||| ||||  ||||  ||||||||||||||    
T  29925856 taagctatattggagaacttatgaaaataagttgaaaaaaacacatgaacattgtcataagctgttttcataagttctcccaaacggtctcacaaaactt 29925955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 36882170 - 36882055
Alignment:
Q  114 gtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    |||||||||  || ||| |||||| ||||||| |||||||   | |||||||||||||| | ||||||||||  ||||   |||||||||||||||  ||    
T  36882170 gtaagctattatgaagattttatggaaataagatgaaaataggttatgaacatgttatatgttgttttcataggttcttgtaaagagtctcacaaatgtt 36882071  T
Q  214 atgtcagtagataaac 229  Q
    |||||| |||||||||    
T  36882070 atgtcaatagataaac 36882055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 213
Target Start/End: Complemental strand, 16458069 - 16457935
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgt 178  Q
    ||||||||||| ||||| | |||||| |||| || | |||||  |||||||| || |||||||||  ||||||   || ||||| | ||| |||||||||    
T  16458069 taaattgtttttgtatatgctataagttgtttttatgagctaaattggagaacttgtgaaaataaactgaaaagagcttatgaaaactgtcataagctgt 16457970  T
Q  179 tttcataaattctatcaaagagtctcacaaaactt 213  Q
    |||||||| ||||  |||| |||||||||||||||    
T  16457969 tttcataagttctcccaaacagtctcacaaaactt 16457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 42100325 - 42100447
Alignment:
Q  114 gtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctatcaaagagtctcacaaaact 212  Q
    ||||||||| || ||||| ||||||||||||| ||||||  |||  ||||| |||| ||||||| |||||| || |||| ||| | |||| ||||||| |    
T  42100325 gtaagctatttttgagaacttatgaaaataagatgaaaacaccttttgaactatgtcataagctattttcacaagttctctcacacagtcacacaaaatt 42100424  T
Q  213 tatgtcagtagataaactcaaat 235  Q
    |||| || ||||||| |||||||    
T  42100425 tatgccaatagataagctcaaat 42100447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 15015922 - 15015979
Alignment:
Q  178 ttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||| ||||  |||| ||||||||||| ||||||||||||||||| |||||||    
T  15015922 ttttcataagttctcccaaacagtctcacaaagcttatgtcagtagataagctcaaat 15015979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 36318761 - 36318826
Alignment:
Q  87 ttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    |||| ||||||||| |||| |||| |  ||||||||||||||||||||||| ||||||| ||||||    
T  36318761 tttttgtataagttttaagttgttttcataagctatcttggagaatttatgtaaataagctgaaaa 36318826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 42500337 - 42500399
Alignment:
Q  1 taaaaatagcttatgtaatcttatacattagcgcttatgtgttataagctgcaaataagttgttt 65  Q
    ||||||||||||||| || ||||||||||||||||  |||| ||||||||| ||||||| |||||    
T  42500337 taaaaatagcttatgcaagcttatacattagcgct--tgtgctataagctggaaataagctgttt 42500399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 9202838 - 9202682
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgt 178  Q
    |||||||||||| ||||||  ||||| |||| |  |||| ||||||| |||| ||||||||||||| || |||   || |||||| |||| |||||||||    
T  9202838 taaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgt 9202739  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    || ||| | || |   ||| ||||| |||||||||||| ||| |||||| |||||||    
T  9202738 ttccattagttttccgaaatagtcttacaaaacttatgccaggagataagctcaaat 9202682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 29588860 - 29588932
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaat 153  Q
    ||||||||||| |||||| ||||| ||||| | ||||||||| ||| ||| |||||| ||||||| |||||||    
T  29588860 aaattgttttcatataagctataaagtgttttcgtaagctatgttgaagagtttatggaaataagctgaaaat 29588932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 6587195 - 6587096
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtttt 181  Q
    ||||||||||||||||| |||||| |||| |  ||||||||  ||||||| || |||||||||| || |||   || |||||| ||| ||||||||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaacctgtcataagctgtttt 6587096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 32010022 - 32010081
Alignment:
Q  176 tgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||| |||| ||||| ||||| |  |||||||||| |||||||||||||||||    
T  32010022 tgttttcataagttctctcaaacagtctgaagaaacttatgtgagtagataaactcaaat 32010081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 32942660 - 32942719
Alignment:
Q  165 atgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtaga 224  Q
    |||| ||||||||| ||||||||||||  |||| ||||  ||||||||||||||||||||    
T  32942660 atgtcataagctgtattcataaattctcccaaacagtcaaacaaaacttatgtcagtaga 32942719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 3977333 - 3977394
Alignment:
Q  125 tggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    ||||||| ||||||||||||| |||| |   |||| |||||||| |||||||||||||||||    
T  3977333 tggagaaattatgaaaataagctgaagacagctaaggaacatgtcataagctgttttcataa 3977394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 4014479 - 4014442
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  4014479 taagctatcttggagaacttatgaaaataagctgaaaa 4014442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 7705997 - 7705932
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||||| ||||  |||||||  ||||||||||||||  ||||||||  |||||||    
T  7705997 ataagctgttttcataagttctcccaaagagcgtcacaaaacttatgctagtagatatgctcaaat 7705932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 17368691 - 17368767
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaa-tgcctaatgaacatgttataagctgttttcataaattct 191  Q
    ||||||||||||||||  ||||| ||||||| |||||| ||| | |||||||||| ||||| ||||||||||| ||||    
T  17368691 taagctatcttggagaggttatggaaataagctgaaaactgcat-atgaacatgtcataagttgttttcataagttct 17368767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 32941545 - 32941598
Alignment:
Q  175 ctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaa 228  Q
    |||||||||||| ||||  ||||  |||||||| ||||||||||||||||||||    
T  32941545 ctgttttcataagttctcccaaacggtctcacagaacttatgtcagtagataaa 32941598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 37954701 - 37954774
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgtt-ataagctgttttcataaa 187  Q
    |||||||| ||||||||  |||||||||||| ||||||   |||||||| || || ||||||||||||||||||    
T  37954701 taagctatattggagaacatatgaaaataagttgaaaaaagctaatgaaaattttcataagctgttttcataaa 37954774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 39248158 - 39248215
Alignment:
Q  159 atgaacatgttataagctgttttcataaattctatcaaagagtctcacaaaacttatg 216  Q
    ||||||| || |||||||||||| |||| ||||  |||| ||||||||||||||||||    
T  39248158 atgaacaagtcataagctgtttttataagttctcccaaacagtctcacaaaacttatg 39248215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 15015808 - 15015748
Alignment:
Q  2 aaaaatagcttatgtaatcttatacattagcgcttatg-tgttataagctgcaaataagtt 61  Q
    |||||||||||||| || ||||||||| ||| ||| || ||| ||||||||||||||||||    
T  15015808 aaaaatagcttatgcaagcttatacataagcacttgtgctgtaataagctgcaaataagtt 15015748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 25461404 - 25461312
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataag 174  Q
    ||||||||| | ||||| |||||  |||| |  ||| ||||||||| | ||||||||||||||| ||||||   ||||||||||||| |||||    
T  25461404 aattgtttttgcataagctataaactgttttcataacctatcttggcgtatttatgaaaataagctgaaaacagctaatgaacatgtcataag 25461312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 28776978 - 28777038
Alignment:
Q  85 tgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataag 145  Q
    |||||||||||| | |||||| |||| |  ||||||||||||||||| | |||||||||||    
T  28776978 tgttttcgtataggctataagctgttttcataagctatcttggagaactaatgaaaataag 28777038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 32703601 - 32703649
Alignment:
Q  38 tgtgttataagctgcaaataagttgtttgtccgaatagggcctaaattg 86  Q
    |||| ||||||||||||||||||||||| ||  || |||||||||||||    
T  32703601 tgtgctataagctgcaaataagttgtttttctaaacagggcctaaattg 32703649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 39594787 - 39594859
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||||| ||||||| |||| |||| |  |||| |||||||  ||| ||||||||||||| ||||||    
T  39594787 taaattgttttcgcataagttgtaagctgttttcataagatatcttgttgaacttatgaaaataagctgaaaa 39594859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 227
Target Start/End: Original strand, 18066108 - 18066256
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgt 178  Q
    |||||||||||| |||||| |||||| |||| |  ||||||||||||||||| ||| |||||||||||||||||  || |||| | |||| |||||||||    
T  18066108 taaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatgagcaatgtcataagctgt 18066207  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    |||||||| || ||  ||| ||| |||||||||||||||||||||||||    
T  18066208 tttcataagttgtacaaaacagtttcacaaaacttatgtcagtagataa 18066256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 1625880 - 1626036
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgt 178  Q
    |||||||||||||||||||||||||| |||| |  ||||||||||||||||| ||| |||||| || ||||||   || ||||||| ||| |||||||      
T  1625880 taaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcataagctac 1625979  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||| |||| ||||| ||||| ||||||||||||||||  ||||| |||||||    
T  1625980 tttcataagttctctcaaatagtcttacaaaacttatgtcaggggataagctcaaat 1626036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 227
Target Start/End: Original strand, 26202028 - 26202156
Alignment:
Q  100 tataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctatcaaag 198  Q
    |||||| |||| || |||| ||| |||||||| ||||||||||||| ||||||   || ||||| || || ||||| |||| |||||||||||| |||||    
T  26202028 tataagttgtttttataagatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataagttgttctcataaattctagcaaag 26202127  T
Q  199 agtctcacaaaacttatgtcagtagataa 227  Q
    | |||||||||||||||||||| ||||||    
T  26202128 aatctcacaaaacttatgtcagcagataa 26202156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 7928351 - 7928232
Alignment:
Q  118 gctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgtt-ataagctgttttcataaattctatcaaagagtctcacaaaacttat 215  Q
    |||||||||||||| ||||||||||||| ||||||   || ||||||| |||  |||||||||||||| || |||| || || ||||||||| |||||||    
T  7928351 gctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtccataagctgttttcaaaagttctttctaacagtctcacacaacttat 7928252  T
Q  216 gtcagtagataaactcaaat 235  Q
    |||| ||||||| |||||||    
T  7928251 gtcaatagataagctcaaat 7928232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 41851515 - 41851670
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgt 178  Q
    ||||||||||| ||||| | |||||| |||| |   ||||||||||||||||||||||||| |||| ||| ||   || ||||| | ||| ||||| |||    
T  41851515 taaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaaaagtgtcataagttgt 41851614  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaa 234  Q
    || ||||||||||  |||  ||||||||||||||| ||||| ||||||| ||||||    
T  41851615 ttccataaattctcccaatcagtctcacaaaacttttgtcaatagataagctcaaa 41851670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 227
Target Start/End: Complemental strand, 43279599 - 43279469
Alignment:
Q  100 tataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctatc--aa 196  Q
    |||||| |||| || |||||||| |||||||| || |||||||||| ||||||   || ||||| || || |||||||||||||||||||||| ||  ||    
T  43279599 tataagttgtttttataagctatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctctcccaa 43279500  T
Q  197 agagtctcacaaaacttatgtcagtagataa 227  Q
    | ||||||||||||||||||  |||||||||    
T  43279499 acagtctcacaaaacttatgctagtagataa 43279469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 43985086 - 43984976
Alignment:
Q  87 ttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    ||||||||||| ||||||| |||| |  |||||||||||| |||  ||||||||||||| |||||||   |||||||||| |||||||||| ||| | ||    
T  43985086 ttttcgtataaattataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaaatagataatgaacatattataagctgatttaacaa 43984987  T
Q  187 attctatcaaa 197  Q
    ||||| |||||    
T  43984986 attctctcaaa 43984976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 208
Target Start/End: Complemental strand, 12313228 - 12313135
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaa 208  Q
    ||||||||||||||||  |||||||||||||||||||    || |||||||||  ||||||||||||||||||||||  |||| | ||||||||    
T  12313228 taagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctcccaaacaatctcacaa 12313135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 44590097 - 44590160
Alignment:
Q  172 aagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||| |||| |||||  |||||||||||||||||||  |||||||||||||||    
T  44590097 aagctgttttcataagttctttcaaacggtctcacaaaacttatgtctatagataaactcaaat 44590160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 680483 - 680589
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtt 179  Q
    ||||||||||||||||||| |||||| | || |  |||||||||||| |||| || |||||||||| ||||||    | || ||||||| ||||||||||    
T  680483 taaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataagctgtt 680582  T
Q  180 ttcataa 186  Q
    |||||||    
T  680583 ttcataa 680589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 235
Target Start/End: Complemental strand, 29628830 - 29628676
Alignment:
Q  83 attgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataag-ctgttt 180  Q
    |||||||| ||||||| |||||| ||||||  |||||||||||||| |||||||| ||||||| ||||||    | |||||| || |||||||  | |||    
T  29628830 attgtttttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaacaatttatgaacaattttataagatttttt 29628731  T
Q  181 tcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    | |||| ||||  || |  ||||||||||||||||| |||||||||| |||||||    
T  29628730 ttataagttcttccagactgtctcacaaaacttatgacagtagataagctcaaat 29628676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 36534783 - 36534885
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    |||||||| | |||||||| ||||||||||| |||||||   | ||||||| | ||||||||||||||||||| || |  |||| |||||||||||||||    
T  36534783 taagctatataggagaattaatgaaaataagctgaaaatagattatgaacaattttataagctgttttcataagttatcccaaacagtctcacaaaactt 36534882  T
Q  214 atg 216  Q
    |||    
T  36534883 atg 36534885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 233
Target Start/End: Complemental strand, 39659599 - 39659445
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtga-aaatgcctaatgaacatgttataagctgt 178  Q
    ||||||||||| || || |||||||  |||| || |||||||| || ||||| ||||||| ||||||||| ||| || ||   ||  ||| |||||||||    
T  39659599 taaattgtttttgtctatgttataacttgtttttataagctatattagagaacttatgaagataaggtgacaaaagcttagaaaatttgtcataagctgt 39659500  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaa 233  Q
    |||| ||| |||| ||| | || ||||| |||||||||||||||||||| |||||    
T  39659499 tttcgtaagttctctcagacagcctcacgaaacttatgtcagtagataagctcaa 39659445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 42419859 - 42419929
Alignment:
Q  165 atgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||| ||||||||||||| ||| ||||  |||| ||||||| |||||||||||||| ||||||||||||||    
T  42419859 atgtcataagctgttttcgtaagttctcccaaacagtctcaaaaaacttatgtcagaagataaactcaaat 42419929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 750685 - 750806
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    ||||||||||||||||| ||||| ||||||| | ||||   || ||||||| ||| || |||| ||||||||| ||||  |||| | ||||||||||| |    
T  750685 taagctatcttggagaacttatgcaaataagctcaaaacagcttatgaacaatgtcattagctcttttcataagttcttgcaaacactctcacaaaacat 750784  T
Q  214 atgtcagtagataaactcaaat 235  Q
    ||| ||| ||||||||||||||    
T  750785 atgccaggagataaactcaaat 750806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 4606940 - 4607061
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    ||||||||||||||||| ||||||||||||| | |||    || |||||| |||| ||||| |||||||| || ||||  |||| |||||||||||||||    
T  4606940 taagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctcccaaatagtctcacaaaactt 4607039  T
Q  214 atgtcagtagataaactcaaat 235  Q
    || |  |||||||| |||||||    
T  4607040 atattggtagataagctcaaat 4607061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 10619219 - 10619154
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||| | ||||  ||| | |||||||||||||| |||||||||||||||||||||    
T  10619219 ataagctgttttcatgagttctcccaaggggtctcacaaaacttgtgtcagtagataaactcaaat 10619154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 27317450 - 27317515
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||| ||||||||||| |||| ||||| ||||||| |||||||||||| |||||||| |||||||    
T  27317450 ataagttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaat 27317515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 33941890 - 33941995
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttt 180  Q
    |||||||||| |||||||||||||  |||| |  |||||||||||||||| ||||||| |||||| |||||    || |||||| ||| ||||| |||||    
T  33941890 aaattgtttttgtataagttataacttgttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgttt 33941989  T
Q  181 tcataa 186  Q
    ||||||    
T  33941990 tcataa 33941995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 1810645 - 1810716
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||| |||||||||||| | |||| || |||||||||||| ||| |||||||||||||| ||||||    
T  1810645 taaattgtttttgtataagttata-gttgtttttataagctatcttgaagagtttatgaaaataagctgaaaa 1810716  T

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Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 2142680 - 2142790
Alignment:
Q  126 ggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtaga 224  Q
    |||||||||||||||||||| | ||||   ||||||||||| || | ||  ||||||||||| ||||  |||| ||||||| ||||||||||   |||||    
T  2142680 ggagaatttatgaaaataagctaaaaacagctaatgaacattgtcacaacttgttttcataagttctcccaaacagtctcataaaacttatgcatgtaga 2142779  T
Q  225 taaactcaaat 235  Q
    |||||||||||    
T  2142780 taaactcaaat 2142790  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 19608637 - 19608567
Alignment:
Q  165 atgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||| ||||||||| || |||| ||||  |||| ||||||| ||||| |||||||||||||||||||||||    
T  19608637 atgtcataagctgtgtttataagttctcgcaaacagtctcataaaacctatgtcagtagataaactcaaat 19608567  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 42659215 - 42659145
Alignment:
Q  165 atgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||| |||||||||||||| || ||||  |||| |||||||||||||||||| ||||| |||| |||||||    
T  42659215 atgtcataagctgttttcaaaacttctcccaaacagtctcacaaaacttatgccagtaaataagctcaaat 42659145  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 15757657 - 15757592
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||| |||||||||||||||  |||  |||||||||||||||||| ||||| |||| |||||||    
T  15757657 ataagcagttttcataaattctcccaagcagtctcacaaaacttatgccagtaaataagctcaaat 15757592  T

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Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 29316865 - 29316764
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtt 179  Q
    ||||||||||||  ||||  |||||| |||| |  | ||||||||||||||| ||||| ||||||| ||||||   || |||||||||| ||||||||||    
T  29316865 taaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataagctgtt 29316766  T
Q  180 tt 181  Q
    ||    
T  29316765 tt 29316764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 30331830 - 30331879
Alignment:
Q  178 ttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    ||||||||| ||||  |||| |||||||||||||||||||||||||||||    
T  30331830 ttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataa 30331879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 35378750 - 35378690
Alignment:
Q  83 attgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataa 144  Q
    |||||||| ||||||| |||||| |||| |||||| |||||||||||| |||||||||||||    
T  35378750 attgttttagtataagctataagctgtttttgtaa-ctatcttggagagtttatgaaaataa 35378690  T

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Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 40279177 - 40279250
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaat 153  Q
    ||||||||||| ||||||| |||||| |||| |  |||||||| |||||||| |||||||||| || |||||||    
T  40279177 taaattgttttggtataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaat 40279250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 15305698 - 15305810
Alignment:
Q  124 ttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagta 222  Q
    |||||||| ||||||||||||| ||||||   || ||||| || |  ||||| |||| ||| || ||||| |||| ||| ||||||||||||||||| ||    
T  15305698 ttggagaacttatgaaaataagttgaaaaaaacttatgaaaattgccataagttgttgtcaaaagttctaccaaacagtttcacaaaacttatgtcaata 15305797  T
Q  223 gataaactcaaat 235  Q
    ||||| |||||||    
T  15305798 gataagctcaaat 15305810  T

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Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 215
Target Start/End: Original strand, 16451118 - 16451234
Alignment:
Q  100 tataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctatcaaag 198  Q
    |||||| |||| | |||||||||||||||||| |  |||||||||| ||||||   || |||||| |||| ||||| ||||||||||| ||||  ||||     
T  16451118 tataagctgttttcgtaagctatcttggagaactcgtgaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctcccaaac 16451217  T
Q  199 agtctcacaaaacttat 215  Q
     |||||||| |||||||    
T  16451218 ggtctcacagaacttat 16451234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 18179295 - 18179223
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaa 187  Q
    ||||||||| ||||||| ||| ||||||||| |||||||  |||||| ||||||  |||| ||||||||||||    
T  18179295 taagctatcctggagaacttacgaaaataagctgaaaatagctaatggacatgtcttaagatgttttcataaa 18179223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 26626853 - 26626917
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataa 144  Q
    ||||||||||||||||||| || ||| |||| |  |||||||||||| |||| ||||||||||||    
T  26626853 taaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataa 26626917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 31744370 - 31744426
Alignment:
Q  171 taagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    ||||||||||||| || |||| ||||| ||||||| |||||||||||| ||||||||    
T  31744370 taagctgttttcaaaagttctctcaaacagtctcagaaaacttatgtcggtagataa 31744426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 32837379 - 32837431
Alignment:
Q  156 ctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaa 208  Q
    |||||| |||||||||||||||||||||||| ||||  |||| ||||||||||    
T  32837379 ctaatggacatgttataagctgttttcataagttctcccaaacagtctcacaa 32837431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 35378619 - 35378511
Alignment:
Q  83 attgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttc 182  Q
    |||| ||||||||||  ||| || |||| | |||||| |||||||| |  ||||||||||||| |||||||  || ||||||| || || ||||||||||    
T  35378619 attgatttcgtataatctattagctgttttcgtaagcaatcttggatagcttatgaaaataagctgaaaataacttatgaacaagtcatcagctgttttc 35378520  T
Q  183 ataaattct 191  Q
    |||| ||||    
T  35378519 ataagttct 35378511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 41812202 - 41812283
Alignment:
Q  1 taaaaatagcttatgtaatcttatacattagcgcttatgtgttataagctgcaaataagttgtttgtccgaatagggcctaaat 84  Q
    |||||||||||||||||| ||||||||| | | ||  |||| ||||| ||||||||||||||||| ||| || ||| |||||||    
T  41812202 taaaaatagcttatgtaagcttatacataatcact--tgtgctataaactgcaaataagttgtttatccaaacaggccctaaat 41812283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 2416386 - 2416449
Alignment:
Q  172 aagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||| |||| ||||  |||  ||| ||||||||||||||| |||||||||||||||||    
T  2416386 aagctgttttaataagttcttccaagcagtttcacaaaacttatgttagtagataaactcaaat 2416449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 3067434 - 3067363
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    |||||||||||| ||| |||||||||||||| | |||| | || ||  |||| |||||||||||||||||||    
T  3067434 taagctatcttgaagagtttatgaaaataagctaaaaacggcttatatacatattataagctgttttcataa 3067363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 6993761 - 6993686
Alignment:
Q  133 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaa 208  Q
    ||||||||||||| | |||||| || ||| |||||  ||||||| ||| ||||| |||||||||| ||||||||||    
T  6993761 ttatgaaaataagctaaaaatgacttatggacatgccataagctatttacataagttctatcaaacagtctcacaa 6993686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 7035618 - 7035519
Alignment:
Q  119 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgt 217  Q
    |||||||||| || |||||||||||||  |||||  ||| ||||||  ||| ||||||||||| ||||| ||||   ||| |||||||||||||||||||    
T  7035618 ctatcttggaaaacttatgaaaataagcggaaaacaccttatgaactgtgtcataagctgtttccataagttcttcaaaacagtctcacaaaacttatgt 7035519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 35379071 - 35379000
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    ||||||||||||||||  ||||||||||||| ||||||   || ||||||| || || ||||||||||||||    
T  35379071 taagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataa 35379000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 1893363 - 1893277
Alignment:
Q  88 tttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataag 174  Q
    ||||||| ||| |||||| |||| | | |||||||||||||||| || |||||||||| |||||||  || ||| |||||| |||||    
T  1893363 tttcgtaaaagctataagctgttttcggaagctatcttggagaacttgtgaaaataagctgaaaataacttatgtacatgtcataag 1893277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 36125432 - 36125495
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||||||| ||||| |  || | ||||||| |||||||| ||||||||||||||||||    
T  36125432 ataagctgttttcatatattctct--aacactctcacagaacttatgccagtagataaactcaaat 36125495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 43529895 - 43529837
Alignment:
Q  133 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 191  Q
    ||||||||||||  |||||||  || |||||||||  ||||||||||||||||||||||    
T  43529895 ttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcataaattct 43529837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 5902560 - 5902511
Alignment:
Q  159 atgaacatgttataagctgttttcataaattctatcaaagagtctcacaa 208  Q
    |||||||||| ||||||||||||||||| ||||  |||| ||||||||||    
T  5902560 atgaacatgtcataagctgttttcataagttcttccaaacagtctcacaa 5902511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 9477942 - 9478003
Alignment:
Q  90 tcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaa 151  Q
    |||||||||||||||| |||| |  ||||||||| ||||||  ||||||||||||| |||||    
T  9477942 tcgtataagttataagttgttttcataagctatcctggagaggttatgaaaataagttgaaa 9478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 16353848 - 16353913
Alignment:
Q  87 ttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||| |||||| |||||| |||| || ||||||||||||||||  || ||||||||| |||||||    
T  16353848 ttttcatataagctataagctgtttttataagctatcttggagatcttgtgaaaataaagtgaaaa 16353913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 24347737 - 24347830
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaa 208  Q
    |||| ||| |||||||| ||||||||||||| |||| ||| || |||||| | | ||||| || |||||||| |||| | ||| ||||||||||    
T  24347737 taagatatattggagaacttatgaaaataagctgaatatggcttatgaacctatcataagttgctttcataagttctctgaaatagtctcacaa 24347830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 40682438 - 40682341
Alignment:
Q  127 gagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtag 223  Q
    ||||| ||||||||||||| ||||||   || ||||||| ||| ||||||| |||| | || ||||  |||| | |||||||||||||||||||||||    
T  40682438 gagaacttatgaaaataagttgaaaacaacttatgaacaatgtcataagctattttaacaagttctcccaaacaatctcacaaaacttatgtcagtag 40682341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 42457963 - 42458076
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaa-tgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    ||||||||||| |||||  |||||||||||| ||||||   | || |||| ||||| |||| |||||||||||| |||   ||| | |||||||||||||    
T  42457963 taagctatcttagagaacatatgaaaataagctgaaaacaacttattgaaaatgttttaagttgttttcataaactctcctaaacactctcacaaaactt 42458062  T
Q  214 atgtcagtagataa 227  Q
    ||| ||||| ||||    
T  42458063 atgccagtaaataa 42458076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42659263 - 42659300
Alignment:
Q  1 taaaaatagcttatgtaatcttatacattagcgcttat 38  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  42659263 taaaaatagcttatgtaagcttatacataagcgcttat 42659300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 45229526 - 45229647
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatg-aacatgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    ||||||||||| ||||| ||||||||||||| ||||||   |||||| || |||| ||||| | ||||||||| ||||  ||||  || |  || |||||    
T  45229526 taagctatcttcgagaacttatgaaaataagctgaaaaaagctaatgaaaaatgtcataaggtcttttcataagttctcccaaacggtgtggcataactt 45229625  T
Q  214 atgtcagtagataaactcaaat 235  Q
    ||| |||||||||| |||||||    
T  45229626 atgccagtagataagctcaaat 45229647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 3312177 - 3312213
Alignment:
Q  199 agtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||||||| |||||||||||| |||||||    
T  3312177 agtctcacaaaacttacgtcagtagataagctcaaat 3312213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 11513879 - 11513951
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaat 153  Q
    ||||||||||| |||||| |||||| |||| |  ||||||||| ||||||| || || ||||||| |||||||    
T  11513879 aaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaat 11513951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 12464563 - 12464491
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||| ||||| | |||||| | || |  ||||||||||||||||| || |||||||||| ||||||    
T  12464563 taaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaa 12464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 34102005 - 34102105
Alignment:
Q  87 ttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    |||| ||||||||||| || |||| || ||||||||| |||| | |||| || |||||| |||||||     ||| ||||||||||||||||||| ||||    
T  34102005 tttttgtataagttattagttgtttttataagctatcctggatagtttacgagaataagttgaaaatagagtatgtacatgttataagctgtttttataa 34102104  T
Q  187 a 187  Q
    |    
T  34102105 a 34102105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 41042072 - 41041984
Alignment:
Q  120 tatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaa 208  Q
    ||||||||||| |||||| ||||||| ||||||   || ||| |||||| ||||| |||||  ||||||||| | ||| ||||||||||    
T  41042072 tatcttggagagtttatggaaataagttgaaaacagctgatggacatgtaataagttgtttctataaattctctgaaacagtctcacaa 41041984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 6e-27; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 82 - 223
Target Start/End: Complemental strand, 20368268 - 20368127
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtttt 181  Q
    ||||||||| |||| ||||||||| |||| |  |||||| |||||||||| ||||||||||||| ||||| |  || |||||||||| ||||| ||||||    
T  20368268 aattgtttttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgtttt 20368169  T
Q  182 cataaattctatcaaagagtctcacaaaacttatgtcagtag 223  Q
    ||||| ||||  |||| ||||| |||||||||||||||||||    
T  20368168 cataagttctcccaaatagtcttacaaaacttatgtcagtag 20368127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 31624238 - 31624396
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtt 179  Q
    ||||||||||||||||||  ||| || |||| |  |||||| |||||| ||| ||||||||||||  | |||||  || ||| |||||| || |||||||    
T  31624238 taaattgttttcgtataatctattagctgttttaataagctgtcttggtgaaattatgaaaataacattaaaataacttatggacatgtcatgagctgtt 31624337  T
Q  180 ttcataaattctatcaaagagtctcacaaaa---cttatgtcagtagataaactcaaat 235  Q
    ||||||||||||| |||| |||||| |||||   |||||||||||| |||| |||||||    
T  31624338 ttcataaattctaccaaacagtctctcaaaacagcttatgtcagtatataagctcaaat 31624396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 13907573 - 13907719
Alignment:
Q  88 tttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataa 186  Q
    ||||||||||  |||||| |||| |  ||||| ||||||||||| ||||||||||||  |||||||  ||  ||||| |||| | |||||||||||||||    
T  13907573 tttcgtataacctataagttgttttcataagccatcttggagaaattatgaaaataaactgaaaataacttgtgaacaatgtcagaagctgttttcataa 13907672  T
Q  187 attctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||| |||||  ||||  ||||||||||| || |||||||||||||||    
T  13907673 attctctcaaaccgtct--caaaacttatgccactagataaactcaaat 13907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 34430550 - 34430442
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatga-acatgttataagctgtt 179  Q
    |||||||||| ||||| ||||||||||||| |  ||||||||||||||||| ||||||||||||| ||||||   || |||| | |||| ||||||||||    
T  34430550 aaattgtttttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtt 34430451  T
Q  180 ttcataaat 188  Q
    |||| ||||    
T  34430450 ttcacaaat 34430442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 82 - 235
Target Start/End: Original strand, 6536597 - 6536748
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttt 180  Q
    ||||||||| ||||| | |||||| |||| ||  ||||||| |||||||||||||||||||||| ||||||   || ||||| | || | ||||||| ||    
T  6536597 aattgtttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaaaagcttatgaaaattgctgtaagctg-tt 6536695  T
Q  181 tcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    | |||||||||  |||| ||  ||||||||||||||||||||| |||||||||||    
T  6536696 tgataaattctcccaaacag--tcacaaaacttatgtcagtaggtaaactcaaat 6536748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 34404767 - 34404660
Alignment:
Q  128 agaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    |||||||||||||||| | ||||||   || ||| |||||| ||||| | ||||||||| ||||  |||||| || |||||||||||||||||| |||||    
T  34404767 agaatttatgaaaatatgctgaaaacagcttatgtacatgtcataagatattttcataagttctcccaaagactcacacaaaacttatgtcagttgataa 34404668  T
Q  228 actcaaat 235  Q
    ||||||||    
T  34404667 actcaaat 34404660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 31624108 - 31624181
Alignment:
Q  118 gctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 191  Q
    |||||||||||||| ||||||||||||| ||||||   || |||||||||| ||||||||||||||||| ||||    
T  31624108 gctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttct 31624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 31813176 - 31813289
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    |||||||||||||||||  |||||||||||| |||||| | || |||||| || | ||||||  ||||||||| ||||  |||| |||||||||||||||    
T  31813176 taagctatcttggagaacatatgaaaataagctgaaaacggcttatgaacaatctcataagcaattttcataagttctcccaaatagtctcacaaaactt 31813275  T
Q  214 atgtcagtagataa 227  Q
    ||| ||||| ||||    
T  31813276 atgccagtaaataa 31813289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 235
Target Start/End: Complemental strand, 34910499 - 34910343
Alignment:
Q  82 aattgttttcgtata--agttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgt 178  Q
    |||||||||||||||  || |||||| ||||||  ||| || | |||||||| |||||||| ||||  |||||   || ||||||| ||| |||||||||    
T  34910499 aattgttttcgtatataagctataagttgttctcataatctgttttggagaacttatgaaagtaagcggaaaacaactcatgaacaatgtcataagctgt 34910400  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||  ||||  |||| | |||| ||||||| || |||||||||||||||||||    
T  34910399 tttcatagtttcttccaaacaatctcccaaaactgatatcagtagataaactcaaat 34910343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 2455280 - 2455395
Alignment:
Q  121 atcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtca 219  Q
    ||||||||||| || |||||||||| ||||||   || || |||| ||| ||||| ||||||||||| |||| ||||| ||| |||| ||||||||||      
T  2455280 atcttggagaagttgtgaaaataagctgaaaacaacttataaacaatgtaataagttgttttcataagttctctcaaatagtttcaccaaacttatgttt 2455379  T
Q  220 gtagataaactcaaat 235  Q
    |||||||| |||||||    
T  2455380 gtagataagctcaaat 2455395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30536670 - 30536733
Alignment:
Q  1 taaaaatagcttatgtaatcttatacattagcgcttatgtgttataagctgcaaataagttgtt 64  Q
    ||||||||||||||| || ||||||||| ||| ||| || ||||||||||||||||||| ||||    
T  30536670 taaaaatagcttatgcaagcttatacataagcacttgtgggttataagctgcaaataagctgtt 30536733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 33089568 - 33089642
Alignment:
Q  162 aacatgttataagctgttttcataaattctatcaaagagtctcacaaa-acttatgtcagtagataaactcaaat 235  Q
    |||||||  |||||||||||||||| |||| | ||| ||||||||||| || ||||||||||||||| |||||||    
T  33089568 aacatgtcctaagctgttttcataagttctctgaaatagtctcacaaatacatatgtcagtagataagctcaaat 33089642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 35070555 - 35070485
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||| ||| |||||||||| |||| ||||||||||| || ||||  ||||||||||||| ||||||    
T  35070555 aattgtttttgtacaagttataagctgtttttgtaagctatgtttgagagcttatgaaaataagttgaaaa 35070485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 215
Target Start/End: Original strand, 35099019 - 35099152
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtttt 181  Q
    ||||||||| ||||| |||||||| |||| |  ||||||||||| ||| |||| |||||||||| ||||||  | ||   || |||| || |||||||||    
T  35099019 aattgtttttgtatatgttataagttgttttcataagctatcttagagtatttttgaaaataagttgaaaaaacttacgaaaaatgtcattagctgtttt 35099118  T
Q  182 cataaattctatcaaagagtctcacaaaacttat 215  Q
    | ||||||||  |||| || |||| |||||||||    
T  35099119 cctaaattctcccaaacagcctcagaaaacttat 35099152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 658499 - 658463
Alignment:
Q  199 agtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||||||||| |||||||||||||||    
T  658499 agtctcacaaaacttatgtcaatagataaactcaaat 658463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 9093646 - 9093574
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||||||||||| |||||| |||| |  |||||| |||| ||||| ||| ||||||||| ||||||    
T  9093646 taaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaa 9093574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 9559426 - 9559358
Alignment:
Q  165 atgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaa 233  Q
    ||||| |||||||||||||||| ||||   ||| |||||||||||||||||| || ||||||| |||||    
T  9559426 atgttgtaagctgttttcataacttctcctaaacagtctcacaaaacttatgccaatagataatctcaa 9559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 10645378 - 10645319
Alignment:
Q  176 tgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||| ||||  |||| ||||| ||||||||||||||| ||||||| |||||||    
T  10645378 tgttttcataagttctcccaaacagtcttacaaaacttatgtcattagataacctcaaat 10645319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 415284 - 415341
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatg 137  Q
    ||||||||||||||||||| |||||| |||| || ||||||||  ||||||| |||||    
T  415284 taaattgttttcgtataagctataagttgtttttataagctatagtggagaacttatg 415341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 835304 - 835267
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  835304 taagctatcttggagaacttatgaaaataagctgaaaa 835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 837306 - 837233
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaat 153  Q
    ||||||||||| || |||| ||||||  ||| |  | ||||||||||||||| ||||||||||||| |||||||    
T  837306 taaattgttttggtgtaagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaat 837233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 6538585 - 6538650
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||| ||||||  | || |||||||| ||||||||| || || ||||||||||||    
T  6538585 ataagctgttttcatcaattctcccgaacagtctcaccaaacttatgccactacataaactcaaat 6538650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 9912242 - 9912133
Alignment:
Q  119 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgt 217  Q
    |||| |||||||| ||||||||||||| | ||||   || ||||||| ||| |||||||| |||||||| ||||   ||| |||| | |||||||||| |    
T  9912242 ctatattggagaacttatgaaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttctccgaaacagtcgcccaaaacttatat 9912143  T
Q  218 cagtagataa 227  Q
    ||||||||||    
T  9912142 cagtagataa 9912133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 28641786 - 28641733
Alignment:
Q  133 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    ||||||||||||| | ||||   || ||||||||||||||||||||||||||||    
T  28641786 ttatgaaaataagctaaaaacagcttatgaacatgttataagctgttttcataa 28641733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 191
Target Start/End: Complemental strand, 10616795 - 10616692
Alignment:
Q  87 ttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    |||||||||||| |||||| |||| || |||| |||||| ||| |||||| |||||||  ||||||   || |||||||||| ||||| |||||| ||||    
T  10616795 ttttcgtataagctataagctgtt-ttttaagttatcttagaggatttataaaaataaactgaaaacagcttatgaacatgtcataaggtgttttgataa 10616697  T
Q  187 attct 191  Q
     ||||    
T  10616696 gttct 10616692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 26559249 - 26559173
Alignment:
Q  160 tgaacatgttataagctgttttcataaattctatcaaagagtctcacaaa-acttatgtcagtagataaactcaaat 235  Q
    ||||||| | ||||| ||||||||||| ||||  |||| |||||||||||  |||||| |||||| |||||||||||    
T  26559249 tgaacatatcataagttgttttcataagttcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaat 26559173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 26694858 - 26694930
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    |||||||||| |||||| |||||||  |||| |  ||| |||||||| |||| ||||||||||||| ||||||    
T  26694858 taaattgtttccgtatatgttataaattgttttcataaactatcttgaagaacttatgaaaataagctgaaaa 26694930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 33887890 - 33887966
Alignment:
Q  160 tgaacatgttataagctgttttcataaattctatcaaagagtctcacaa-aacttatgtcagtagataaactcaaat 235  Q
    ||||||||| ||||||| |||||||||||||| ||||| | | ||||||   || ||||||||| ||||||||||||    
T  33887890 tgaacatgtcataagctattttcataaattctctcaaacaatgtcacaagtgctaatgtcagtaaataaactcaaat 33887966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 35069582 - 35069546
Alignment:
Q  199 agtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  35069582 agtcttacaaaacttatgtcagtagataagctcaaat 35069546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 82 - 234
Target Start/End: Original strand, 1706604 - 1706757
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttt 180  Q
    ||||||||||||| ||| |||||| |||| |  ||| |||||||||| |  ||||||||||||| || ||||  || ||||||| ||  |||||||||||    
T  1706604 aattgttttcgtagaagctataagctgttttcataaactatcttggacagcttatgaaaataagttggaaatagcttatgaacaatgccataagctgttt 1706703  T
Q  181 tcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaa 234  Q
    |||||| |||| |||||  |||||||||||||||||||||||||||||||||||    
T  1706704 tcataatttctctcaaaccgtctcacaaaacttatgtcagtagataaactcaaa 1706757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 21731726 - 21731590
Alignment:
Q  100 tataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctatcaaag 198  Q
    |||||| |||| || |||||||| ||||||||||||||||| |||| ||||||    | ||||| || || ||||||||||||||||| ||||  ||||     
T  21731726 tataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttcataagttctcccaaac 21731627  T
Q  199 agtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    | ||||||||||||||||||||||||||  |||||||    
T  21731626 aatctcacaaaacttatgtcagtagatatgctcaaat 21731590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 2244066 - 2244183
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    |||||||| |||||||| ||||||||||||||||||||    | ||||| || || |||||||||||| | |||||||  |||| ||| ||| |||||||    
T  2244066 taagctatattggagaacttatgaaaataaggtgaaaaaagtttatgaatattgtcataagctgtttttaaaaattctcccaaacagtttcaaaaaactt 2244165  T
Q  214 atgtcagtagataaactc 231  Q
    ||||||||||||||||||    
T  2244166 atgtcagtagataaactc 2244183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 17822920 - 17822799
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatg-aacatgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    ||||||||||||||||| ||||||||||||| | ||||   || ||| || |||| ||||||||||||||||  ||||   ||| ||||||||| |||||    
T  17822920 taagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttctcctaaatagtctcacagaactt 17822821  T
Q  214 atgtcagtagataaactcaaat 235  Q
    |||||||||||||| |||||||    
T  17822820 atgtcagtagataagctcaaat 17822799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 24169279 - 24169395
Alignment:
Q  116 aagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaactta 214  Q
    |||||||||||||||  ||||||||||||| ||||||   || ||||| | ||| ||||||| |||| | || |||| ||||| ||||||||||||||||    
T  24169279 aagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttctctcaaatagtctcacaaaactta 24169378  T
Q  215 tgtcagtagataaactc 231  Q
    || ||||||||||||||    
T  24169379 tgccagtagataaactc 24169395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 27043920 - 27043764
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgt 178  Q
    ||||||||||||||||||| |||||| |||| || ||| |||||||||||||  |||||| ||||| | ||||    | ||| || |||  ||||||| |    
T  27043920 taaattgttttcgtataagctataagatgtttttataaactatcttggagaacgtatgaatataagctaaaaacaatttatggacgatgccataagctat 27043821  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    || ||||| ||||  |||| ||| ||||||||||||||||||||||||| |||||||    
T  27043820 ttgcataacttcttccaaacagtttcacaaaacttatgtcagtagataagctcaaat 27043764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 235
Target Start/End: Original strand, 54426036 - 54426179
Alignment:
Q  93 tataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattct 191  Q
    |||| |||||||| |||| || ||| |||| |||||||| ||||||||||||  ||||||   || ||||| || || ||||||||||||| ||| ||||    
T  54426036 tatatgttataagttgtttttataatctatattggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttct 54426135  T
Q  192 atcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
      |||  |||||||||||||||||| |||||||||| |||||||    
T  54426136 cccaagcagtctcacaaaacttatgccagtagataagctcaaat 54426179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 2996554 - 2996678
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttt 180  Q
    ||||||||||  ||||||||||||| |||| |  ||||||||||||||||   |||||||||||| ||||||   || ||| |||||| ||||| |||||    
T  2996554 aaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttt 2996653  T
Q  181 tcataaattctatcaaagagtctca 205  Q
    ||||||  ||| ||||| |||||||    
T  2996654 tcataagctctctcaaacagtctca 2996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 13126630 - 13126522
Alignment:
Q  116 aagctatcttggagaatttatgaaaataaggtgaaaatgcctaatga-acatgttataagctgttttcataaattctatcaaagagtctcacaaaactta 214  Q
    |||||||||| ||||| ||||||||||||| ||||||   || |||| | |||| |||||||||||| |||| ||||  |||| ||||||||||||||||    
T  13126630 aagctatcttcgagaacttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaaacagtctcacaaaactta 13126531  T
Q  215 tgtcagtag 223  Q
    ||| |||||    
T  13126530 tgttagtag 13126522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 41336740 - 41336896
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgt 178  Q
    ||||||||||| ||||| |||||||  |||| || |||||||   || |||||||| ||||||||| ||||||   || ||||| | ||| |||||||||    
T  41336740 taaattgtttttgtatatgttataaattgtttttctaagctagggtgaagaatttacgaaaataagttgaaaaaagcttatgaaaactgtcataagctgt 41336839  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||| ||| ||||  | ||   ||||||||||||||||| |||||||||||||||||    
T  41336840 tttcttaagttcttcctaactatctcacaaaacttatgtgagtagataaactcaaat 41336896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 216
Target Start/End: Original strand, 49202627 - 49202762
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttt 180  Q
    ||||||||  ||||||| |||||| |||| | ||||||||||||||| || | ||||||||||| ||||||   || |||||| |||| |||| ||| ||    
T  49202627 aattgtttcggtataagctataagttgttttcgtaagctatcttggataactaatgaaaataagttgaaaacaacttatgaacaatgtgataatctggtt 49202726  T
Q  181 tcataaattctatcaaagagtctcacaaaacttatg 216  Q
    | |||| ||||  |||| ||||||||||||||||||    
T  49202727 ttataagttcttccaaacagtctcacaaaacttatg 49202762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 214
Target Start/End: Complemental strand, 50681179 - 50681044
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgt 178  Q
    ||||||||||| ||||| | |||||| ||||  | |||||||| |||||||| ||||||||||||  ||||||   || ||||| | ||| || | ||||    
T  50681179 taaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaattgaaaaaagcttatgaaaattgtcattaactgt 50681080  T
Q  179 tttcataaattctatcaaagagtctcacaaaactta 214  Q
    |||||||| |||| ||||| ||||||||||||||||    
T  50681079 tttcataagttctctcaaacagtctcacaaaactta 50681044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 15173302 - 15173245
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    ||||||| |||||||||| |||  |||| |||||||||||||||||||||||||||||    
T  15173302 ataagctattttcataaagtctcccaaacagtctcacaaaacttatgtcagtagataa 15173245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 235
Target Start/End: Complemental strand, 35571718 - 35571565
Alignment:
Q  83 attgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgtttt 181  Q
    |||||||||||||||| |||||| |||| |  ||||||||||| ||||| || |||||||||| |||||    || ||||||| ||| ||||||||||||    
T  35571718 attgttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaacagtgtaataagctgtttt 35571619  T
Q  182 cataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
     | || ||||  ||||   || |||||||||||||  ||||||||| |||||||    
T  35571618 taaaagttctcccaaactatcccacaaaacttatgctagtagataagctcaaat 35571565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 39691148 - 39691083
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||  |||||||||| ||||| ||||||||||||||||||  ||||||||| |||||||    
T  39691148 ataagctgttcccataaattctctcaaacagtctcacaaaacttatgctagtagataagctcaaat 39691083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 52315252 - 52315131
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    |||||||| ||||| || ||||||||||||| |||||    || ||||| | ||| ||||| |||||| |||| ||||  |||| | |||||||||||||    
T  52315252 taagctattttggaaaacttatgaaaataagctgaaagcaacttatgaataatgtgataagttgttttgataagttcttccaaacaatctcacaaaactt 52315153  T
Q  214 atgtcagtagataaactcaaat 235  Q
    | ||||||||||||||||||||    
T  52315152 acgtcagtagataaactcaaat 52315131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 55437147 - 55437212
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||| ||||||||||| |||| ||||| | | |||||||||||||| ||||||||||||||||||    
T  55437147 ataagttgttttcataagttctttcaaacaatttcacaaaacttatggcagtagataaactcaaat 55437212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 40174633 - 40174693
Alignment:
Q  175 ctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||| || |  |||| ||||||||||||||||||| |||||||||||||||||    
T  40174633 ctgttttcataagttatcccaaacagtctcacaaaacttatgttagtagataaactcaaat 40174693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 49940165 - 49940101
Alignment:
Q  171 taagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||| || || ||| |||||||    
T  49940165 taagctgttttcataagttctctcaaacagtctcacaaaacttatgttagcaggtaagctcaaat 49940101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 30066853 - 30066751
Alignment:
Q  83 attgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttc 182  Q
    |||||||||||||||  | |||| ||||||  ||||||||||||||||  |||| |||| ||| ||||||    | |||||||| |||||||||||||||    
T  30066853 attgttttcgtataaactgtaagctgttctcataagctatcttggagagcttataaaaacaagctgaaaacagattatgaacatattataagctgttttc 30066754  T
Q  183 ata 185  Q
    |||    
T  30066753 ata 30066751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 209
Target Start/End: Complemental strand, 28300389 - 28300260
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtt 179  Q
    ||||||||||| ||||||| |||||  | || |  || ||||||||| |||  ||||||||||||| ||||||   || | |||||||| ||| ||||||    
T  28300389 taaattgtttttgtataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctgtt 28300290  T
Q  180 ttcataaattctatcaaagagtctcacaaa 209  Q
    |||||||||||| ||||  |||| ||||||    
T  28300289 ttcataaattctctcaatcagtcacacaaa 28300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 23819074 - 23819198
Alignment:
Q  85 tgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcat 184  Q
    ||||||| ||||||||||||  |||| |  |||||||||||| |||  ||||  ||||||| ||||||   || ||| |||||| ||||||||||||| |    
T  23819074 tgttttcatataagttataacatgttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagctgttttctt 23819173  T
Q  185 aaattctatcaaagagtctcacaaa 209  Q
    ||| |||  |||| |||||||||||    
T  23819174 aaactcttccaaacagtctcacaaa 23819198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 51630091 - 51630163
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    |||||||||||  |||||| |||||| | || |  |||||||||||| |||||||||||||||||| ||||||    
T  51630091 taaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaa 51630163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 219
Target Start/End: Complemental strand, 54069507 - 54069367
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgt 178  Q
    ||||||||||| ||||| | |||||  |||| || |||| ||| ||| ||||  |||||||||||| | ||||   || ||||| || ||| ||||||||    
T  54069507 taaattgtttttgtatatgctataatttgtttttataagttatattgaagaacatatgaaaataagttaaaaacagcttatgaaaattgttgtaagctgt 54069408  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtca 219  Q
    ||||| |||| ||| |||| |||| ||||||||||||||||    
T  54069407 tttcaaaaatcctaccaaacagtcccacaaaacttatgtca 54069367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 18011886 - 18011957
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    |||||||||||| ||| |||||||||||||| | |||| | || ||  |||| |||||||||||||||||||    
T  18011886 taagctatcttgaagagtttatgaaaataagctaaaaacggcttatatacatattataagctgttttcataa 18011957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 21523584 - 21523675
Alignment:
Q  126 ggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgt 217  Q
    |||||| ||||||||||||| |||||| || ||   || |||| ||||| ||||||||||||||||  |||| ||| |||||||| ||||||    
T  21523584 ggagaagttatgaaaataagctgaaaaagcttatgaaaaatgtcataagttgttttcataaattcttccaaacagtgtcacaaaatttatgt 21523675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 1408327 - 1408285
Alignment:
Q  163 acatgttataagctgttttcataaattctatcaaagagtctca 205  Q
    |||||| |||||||||||||||||||||| ||||| |||||||    
T  1408327 acatgtaataagctgttttcataaattctctcaaacagtctca 1408285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 2702981 - 2702939
Alignment:
Q  38 tgtgttataagctgcaaataagttgtttgtccgaatagggcct 80  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||    
T  2702981 tgtgttataagctggaaataagttgtttatccaaatagggcct 2702939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 1312860 - 1312969
Alignment:
Q  119 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcaca-aaacttatgt 217  Q
    |||||||||||| |||||| ||||||| ||||||    | ||||| |||| ||||| ||||||| |||| ||||||||| |||| |||| |  ||||||     
T  1312860 ctatcttggagagtttatggaaataagctgaaaacagtttatgaatatgtaataagttgttttcgtaaactctatcaaacagtcacacacatgcttatgc 1312959  T
Q  218 cagtagataa 227  Q
    ||||||||||    
T  1312960 cagtagataa 1312969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 4304153 - 4304100
Alignment:
Q  166 tgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtca 219  Q
    ||||||||  ||||||||||| |||| ||||| ||| |||||||||||||||||    
T  4304153 tgttataaattgttttcataagttctctcaaacagtttcacaaaacttatgtca 4304100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 20719769 - 20719834
Alignment:
Q  165 atgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaact 230  Q
    |||| ||||||||||||| ||| ||||  |||| |||| |||||||||||||  ||||||||||||    
T  20719769 atgtcataagctgttttcttaagttcttccaaatagtcgcacaaaacttatgctagtagataaact 20719834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 22030159 - 22030099
Alignment:
Q  4 aaatagcttatgtaatcttatacattagcgcttatgtgttataagctgcaaataagttgttt 65  Q
    ||||||||||||| | ||||||||| |||||||||   | ||||||||||||||||||||||    
T  22030159 aaatagcttatgtgagcttatacataagcgcttat-catgataagctgcaaataagttgttt 22030099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 25904222 - 25904157
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||||||||  |||  |||| |||||||||||| |||||||| | ||||| |||||||    
T  25904222 ataagctgttttcataagctctcccaaacagtctcacaaaatttatgtcattggataagctcaaat 25904157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 29657455 - 29657520
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||||| |||| ||||  | ||||||||||||| |||  |||||||| |||||||    
T  29657455 ataagctgttttcataagttctctcaagcaatctcacaaaacttgtgttggtagataagctcaaat 29657520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 197
Target Start/End: Complemental strand, 37864042 - 37863927
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtt 179  Q
    ||||||||||| || |||| |||||| |||| |  ||||||||||||| ||  |||||||  |||||||||||   || |||||| ||| ||||||||||    
T  37864042 taaattgtttttgtttaagatataagctgtt-tcataagctatcttggtgaggttatgaat-taaggtgaaaacaacttatgaacgtgtcataagctgtt 37863945  T
Q  180 ttcataaattctatcaaa 197  Q
    ||||||| |||| |||||    
T  37863944 ttcataagttctctcaaa 37863927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 42404021 - 42403957
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||||| |||||||  |||| || | |||||||||||||||||| ||||| |||||||    
T  42404021 ataagctgttttcagaaattctcccaaatag-cacacaaaacttatgtcagttgataagctcaaat 42403957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 44797975 - 44798008
Alignment:
Q  194 caaagagtctcacaaaacttatgtcagtagataa 227  Q
    |||| |||||||||||||||||||||||||||||    
T  44797975 caaacagtctcacaaaacttatgtcagtagataa 44798008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 49004033 - 49003976
Alignment:
Q  178 ttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||| |||| ||||| |||||||||||||||| |  ||||||||| |||||||    
T  49004033 ttttcataagttctctcaaatagtctcacaaaacttaagctagtagataagctcaaat 49003976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 1555019 - 1554975
Alignment:
Q  159 atgaacatgttataagctgttttcataaattctatcaaagagtct 203  Q
    |||||||||| ||||||| |||||||||||||| ||||| |||||    
T  1555019 atgaacatgtcataagctattttcataaattctctcaaacagtct 1554975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 8705041 - 8705077
Alignment:
Q  199 agtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  8705041 agtctcacaaaacttatgtcaatagataagctcaaat 8705077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 17884048 - 17884120
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||| ||||||||||| || |||| |  |||||||| |||||||  |||||||||| || ||||||    
T  17884048 taaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattagctgaaaa 17884120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 28615541 - 28615597
Alignment:
Q  118 gctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataag 174  Q
    |||||||||||||  ||||| |||||||||||||||  |||||| |||||| |||||    
T  28615541 gctatcttggagagcttatggaaataaggtgaaaatatctaatggacatgtcataag 28615597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 29388594 - 29388666
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||| ||| | || |||||  ||| || ||||||||  ||||||||||||||||||||| ||||||    
T  29388594 taaattgtttttgtagatgtgataagtagtttttataagctatactggagaatttatgaaaataagttgaaaa 29388666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 44249304 - 44249368
Alignment:
Q  119 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttca 183  Q
    |||||||||||| |||||||||||||| |||| |   || || ||||||| ||||||||||||||    
T  44249304 ctatcttggagagtttatgaaaataagctgaagaaaacttatcaacatgtcataagctgttttca 44249368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 49940078 - 49940018
Alignment:
Q  83 attgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaata 143  Q
    |||||||||||||||| ||| || |||| |  ||||||||||||||| |||||||| ||||    
T  49940078 attgttttcgtataagctattagctgttttcataagctatcttggagcatttatgataata 49940018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 56480328 - 56480392
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataa 144  Q
    ||||||||||  |||||||||||||| |||| |  ||| ||||||||||||  ||||||||||||    
T  56480328 taaattgtttatgtataagttataagctgttttcataaactatcttggagagcttatgaaaataa 56480392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 14443449 - 14443565
Alignment:
Q  100 tataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaaga 199  Q
    ||||||||||| || |||||||  |||||||||||||||||||||||||||||   || | |||||||||| |||||||||||||||||||| ||| | |    
T  14443449 tataaggtgtttttataagctacattggagaatttatgaaaataaggtgaaaacaacttacgaacatgttaaaagctgttttcataaattctttcatata 14443548  T
Q  200 gtctcacaaaacttatg 216  Q
    ||||||||||| |||||    
T  14443549 gtctcacaaaatttatg 14443565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 80 - 214
Target Start/End: Complemental strand, 51695585 - 51695450
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgt 178  Q
    ||||||||||||||||||||||| || |||| |  ||||||||||||||||||||||||||||||| |||||||  || |||||| |||| ||||| |||    
T  51695585 taaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgt 51695486  T
Q  179 tttcataaattctatcaaagagtctcacaaaactta 214  Q
    ||  |||| ||||  |||| |||||||||| |||||    
T  51695485 ttatataagttcttccaaacagtctcacaagactta 51695450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 3234105 - 3233949
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgt 178  Q
    ||||||||||| ||||| | |||||| |||| || |||||||| |||||||| |||||||||||||  |||||   || ||||| | ||||||||| |||    
T  3234105 taaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttgt 3234006  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||| ||||  | || |||||||||||||||| | || ||||||| |||||||    
T  3234005 tttcataagttctccctaacagtctcacaaaacttacggcactagataagctcaaat 3233949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 38001655 - 38001731
Alignment:
Q  159 atgaacatgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||| || ||||||||||||||||| ||||  |||| ||||||||||||||||||||||| |||||||||||||    
T  38001655 atgaacaggtcataagctgttttcataagttctcccaaacagtctcacaaaacttatgtcagttgataaactcaaat 38001731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 227
Target Start/End: Complemental strand, 38018454 - 38018306
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgt 178  Q
    ||||||||||||||||||| || ||| |||| |  ||   |||||||||||||| ||||||||||| ||||||| |||||||||| ||||  ||| |||     
T  38018454 taaattgttttcgtataagctagaagctgttttcatacattatcttggagaattcatgaaaataagctgaaaatacctaatgaacaatgtcctaatctgc 38018355  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    |||||||| || |  |||  |||||||||||||||||| ||||||||||    
T  38018354 tttcataagttttcccaaccagtctcacaaaacttatgccagtagataa 38018306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 7941621 - 7941742
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    |||||||| | |||||| ||||||||||||| |||||||  ||   |||| |||| ||||||||||||||||||||||  |||| ||||||||||||||     
T  7941621 taagctatttcggagaacttatgaaaataagttgaaaatagcttcggaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactc 7941720  T
Q  214 atgtcagtagataaactcaaat 235  Q
    | || || ||||||||||||||    
T  7941721 acgttagcagataaactcaaat 7941742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 37842445 - 37842290
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtt 179  Q
    |||| ||| |||| ||||| |||||| |||| |  |||||||||||| |||| |||| |||||||| ||||||   || |||||||||| || || ||||    
T  37842445 taaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcattagatgtt 37842346  T
Q  180 ttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||| |||||   || ||| |||| |||||||| ||||||||||| |||||||    
T  37842345 ttcataagttctactgaacagtgtcaccaaacttatatcagtagataagctcaaat 37842290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 27820428 - 27820354
Alignment:
Q  79 ctaaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaat 153  Q
    |||||||||||  ||||||| |||| | |||| || ||||||||||||||||||||||||||||||| |||||||    
T  27820428 ctaaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaat 27820354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 2295167 - 2295232
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||||| ||||  |||| |||||||||||||||||| |||||||||| |||||||    
T  2295167 ataagctgttttcataagttctcccaaacagtctcacaaaacttatgccagtagataagctcaaat 2295232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 24334270 - 24334331
Alignment:
Q  174 gctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||| || |||||||||||||    
T  24334270 gctgtttttataaattctctcaaatagtctcacaaaacttatgtccgttgataaactcaaat 24334331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 49938734 - 49938883
Alignment:
Q  87 ttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcata 185  Q
    |||| ||||| |||||||| |||| || |||||||| || ||||| ||||||||||||| ||||||   ||  |||| | ||| ||||||||||||||||    
T  49938734 tttttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcata 49938833  T
Q  186 aattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    | ||||  |||| | |||||||||||||||| ||  | ||||||||||||    
T  49938834 agttctcccaaacaatctcacaaaacttatgccacgatataaactcaaat 49938883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 7069283 - 7069343
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaat 142  Q
    ||||||||||||||||| |||||| || | |||||||||||||||||||| ||||||||||    
T  7069283 aattgttttcgtataagctataagctgcttttgtaagctatcttggagaacttatgaaaat 7069343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 473144 - 473299
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtt 179  Q
    |||||||||||||| || | |||||| |||| || |||| | | |||||||| ||||||||||||| ||||||   || ||||| ||  |||||||| ||    
T  473144 taaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtataagctttt 473243  T
Q  180 ttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||| ||||  ||||  || ||||| |||||||| |||||||||  |||||||    
T  473244 ttcataagttctcccaaaatgtttcacagaacttatgccagtagataggctcaaat 473299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 37617462 - 37617399
Alignment:
Q  172 aagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||||||||  |||| |||||||||||||||| | || |||||||||||||||    
T  37617462 aagctgttttcataaattctcgcaaacagtctcacaaaacttacggcaatagataaactcaaat 37617399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 216
Target Start/End: Original strand, 2777874 - 2778008
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtttt 181  Q
    |||||| || ||||||| |||||| |||| |  |||| || ||||||||| ||||||||||||| |||||| | || ||||| | || ||||| || |||    
T  2777874 aattgtctttgtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaatacgtcataagttggttt 2777973  T
Q  182 cataaattctatcaaagagtctcacaaaacttatg 216  Q
    ||||| ||||   ||| ||||||||||||||||||    
T  2777974 cataagttctcctaaacagtctcacaaaacttatg 2778008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 7137053 - 7136971
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaa 197  Q
    ||||||||||||||||| ||||||||||||| |||||||  || ||||| |||| ||||||  ||||||||| |||| |||||    
T  7137053 taagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataagcgattttcataagttctttcaaa 7136971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 6557043 - 6557100
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    ||||||| ||||||||| |||| ||||| ||||||||||||||||||| |||||||||    
T  6557043 ataagctattttcataagttctctcaaatagtctcacaaaacttatgttagtagataa 6557100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 29904822 - 29904887
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||| |||| |||| ||||| ||||||||||||||||||  ||||||||| |||||||    
T  29904822 ataagctgtttttataagttctctcaaacagtctcacaaaacttatgcaagtagataagctcaaat 29904887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 39976201 - 39976144
Alignment:
Q  178 ttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||| |||| ||||| ||| ||||||||||||||||||||||||| |||||||    
T  39976201 ttttcataagttctctcaaacagtttcacaaaacttatgtcagtagataatctcaaat 39976144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 27820251 - 27820156
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctatcaaagagtctcacaaaa 210  Q
    |||||||||||  |||||||||||||||||| |||||||  || |||||| |||| ||||||| ||||||||||||||   ||| ||||||||||||    
T  27820251 taagctatcttaaagaatttatgaaaataagctgaaaatagcttatgaacaatgtaataagct-ttttcataaattctccaaaacagtctcacaaaa 27820156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 34290228 - 34290344
Alignment:
Q  92 gtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 191  Q
    ||||||| |||||| |||| |  |||||||||||| |||| ||||||||||||| ||||||   || ||||| |||| ||||||| |||| |||||||||    
T  34290228 gtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataagcttttttaataaattct 34290327  T
Q  192 atcaaagagtctcacaa 208  Q
      |||| ||| ||||||    
T  34290328 cccaaatagtttcacaa 34290344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 35925705 - 35925776
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    ||||||||| |||||| |||||| ||||||| ||||||   || |||||||||| |||||||||||||||||    
T  35925705 taagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataa 35925776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 235
Target Start/End: Original strand, 1432497 - 1432651
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttt 180  Q
    |||||||||  |||||| |||||  |||| |  ||| ||||||||||||| |||||||| |||| | |  ||| || ||||||| ||| ||| ||| |||    
T  1432497 aattgtttttttataagctataaattgttttcataaactatcttggagaacttatgaaagtaagctaagtatgtcttatgaacaatgtcatacgctattt 1432596  T
Q  181 tcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||| ||||  |||| |||||||||||| ||||||| || ||||| |||||||    
T  1432597 tcataagttcttccaaacagtctcacaaaatttatgtcggtggataagctcaaat 1432651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 33204382 - 33204328
Alignment:
Q  181 tcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||| ||||  |||| ||||||||||||||||||||||||||||| |||||||    
T  33204382 tcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctcaaat 33204328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 4445731 - 4445816
Alignment:
Q  123 cttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaa 208  Q
    ||||||||  || |||||||||| ||||||   ||  |||||||||||||||||| |||||||||||||  |||| ||||||||||    
T  4445731 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 4445816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 13810069 - 13810126
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    |||| |||| ||||||| |||| | |||||||||||||||||||| ||||||||||||    
T  13810069 ataaactgtattcataagttctctaaaagagtctcacaaaacttacgtcagtagataa 13810126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 36514759 - 36514610
Alignment:
Q  88 tttcgtataagttataaggtgttctt-gtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcata 185  Q
    |||||||||||||||||| |||| || | ||| |||||||||  | ||||||||| ||| ||||||   ||  | |||| ||| ||||| | ||||||||    
T  36514759 tttcgtataagttataagttgtttttcgcaagttatcttggattacttatgaaaaaaagctgaaaacagcttctaaacaatgtcataagttattttcata 36514660  T
Q  186 aattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    | ||||  | || ||||||| |||||||||| ||||||||||||||||||    
T  36514659 agttctccctaacagtctcaaaaaacttatggcagtagataaactcaaat 36514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 37631650 - 37631577
Alignment:
Q  79 ctaaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    |||||||||||| || || | ||| || |||| ||||||||||| |||||||| ||||||||||||| ||||||    
T  37631650 ctaaattgtttttgtgtatgatattagctgtttttgtaagctatattggagaacttatgaaaataagctgaaaa 37631577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 45975705 - 45975742
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  45975705 taagctatcttggagaatttatgaaaataagctgaaaa 45975742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 1232959 - 1232923
Alignment:
Q  116 aagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    |||||||||||||||||||||||||||||| ||||||    
T  1232959 aagctatcttggagaatttatgaaaataagctgaaaa 1232923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 17778972 - 17779048
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 191  Q
    |||||||||||||||||||| || ||||||||||||||    | ||||||| |||||||| |||||| |||| ||||    
T  17778972 taagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgttataagttgtttttataagttct 17779048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 211
Target Start/End: Complemental strand, 24915141 - 24915009
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatg-aacatgttataagctgt 178  Q
    ||||||||||| ||||| | |||||| |||| |  |||||| |||||||||| || |||||||||| ||||||   || ||| || |||| ||||| |||    
T  24915141 taaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcataagttgt 24915042  T
Q  179 tttcataaattctatcaaagagtctcacaaaac 211  Q
    ||||||||||| |  |||| || ||||||||||    
T  24915041 tttcataaattgtcccaaacagcctcacaaaac 24915009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 38503535 - 38503483
Alignment:
Q  100 tataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    |||||| |||| |||| ||||||||||||||| ||||||||||||| ||||||    
T  38503535 tataagttgtttttgttagctatcttggagaacttatgaaaataagctgaaaa 38503483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 50644253 - 50644189
Alignment:
Q  171 taagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||| ||||||||||| ||||  |||| ||||||||||||| ||||| ||||||||| |||||||    
T  50644253 taagttgttttcataagttctcccaaacagtctcacaaaacatatgttagtagataagctcaaat 50644189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 235
Target Start/End: Original strand, 6292474 - 6292628
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttt 180  Q
    ||||| |||||  |||| ||||||| | || | |||| |||| |||||||  ||||||||||||| ||||||   || |||||||||| |||||||||||    
T  6292474 aaattattttcacataacttataagctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgttt 6292573  T
Q  181 tcataaattctatcaaagagtctcacaa-aacttatgtcagtagataaactcaaat 235  Q
    | | |||||||  |||| | ||||| ||   ||||||||||||||||| |||||||    
T  6292574 t-aaaaattctcccaaacaatctcaaaagtgcttatgtcagtagataagctcaaat 6292628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 7218163 - 7218092
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||| |||||| |||||| |||| |  ||| ||||| ||||||| ||||||||||||| ||||||    
T  7218163 aaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaa 7218092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 9572100 - 9572049
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagt 221  Q
    ||||||||||||||||| ||||  |||| ||||||||||| |||||||||||    
T  9572100 ataagctgttttcataagttctcccaaacagtctcacaaatcttatgtcagt 9572049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 41505666 - 41505717
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaa 131  Q
    ||||||||||||||||| |||||||| |||| || |||||||| ||||||||    
T  41505666 taaattgttttcgtatatgttataagctgtttttataagctatattggagaa 41505717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 49888749 - 49888812
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataag 145  Q
    ||||||||||||||||| ||| || |||| |  ||||||||||| ||||| |||||||||||||    
T  49888749 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 49888812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 7119937 - 7119891
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatg 216  Q
    ||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  7119937 ataagttgttttcataaattcttgcaaacagtctcacaaaacttatg 7119891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 10233652 - 10233590
Alignment:
Q  165 atgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    |||| ||||||||||||||||| ||||  |||| ||||| ||||||| ||||||||| |||||    
T  10233652 atgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataa 10233590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 145
Target Start/End: Original strand, 17778721 - 17778751
Alignment:
Q  115 taagctatcttggagaatttatgaaaataag 145  Q
    |||||||||||||||||||||||||||||||    
T  17778721 taagctatcttggagaatttatgaaaataag 17778751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 232
Target Start/End: Original strand, 30192038 - 30192076
Alignment:
Q  194 caaagagtctcacaaaacttatgtcagtagataaactca 232  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  30192038 caaagagtctcataaaacttatgtcaatagataaactca 30192076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 39596578 - 39596648
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaa 151  Q
    |||||||||| ||||||| |||||| || | || ||||||||||||||||  |||| |||||||| |||||    
T  39596578 aaattgtttttgtataagctataagatggttttataagctatcttggagagcttataaaaataagttgaaa 39596648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 232
Target Start/End: Complemental strand, 1684069 - 1684036
Alignment:
Q  199 agtctcacaaaacttatgtcagtagataaactca 232  Q
    ||||||||||||||||||||||||||||| ||||    
T  1684069 agtctcacaaaacttatgtcagtagataagctca 1684036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5741620 - 5741583
Alignment:
Q  1 taaaaatagcttatgtaatcttatacattagcgcttat 38  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  5741620 taaaaatagcttatgtaaacttatacataagcgcttat 5741583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 5887085 - 5886989
Alignment:
Q  81 aaattgttttcgtataa--gttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagc 175  Q
    |||||||||||||| ||  |||||||| ||||  | ||||| ||||||||||| ||| ||||||||| ||||||   || |||||||||| ||||||    
T  5887085 aaattgttttcgtacaaaagttataagctgtttctataagccatcttggagaacttacgaaaataagctgaaaacaacttatgaacatgtcataagc 5886989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 7244652 - 7244588
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||| ||||||||||| |||  | ||| ||||||||||||||||| ||| |||||||||||||||    
T  7244652 ataagttgttttcataagttcc-taaaatagtctcacaaaacttatatcaatagataaactcaaat 7244588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 10199463 - 10199342
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaa-aactt 213  Q
    |||||||| || ||||  ||||||||||||| ||||||   || |||||||||| ||||||| ||||||| | ||||  |||| ||| ||||||   |||    
T  10199463 taagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaagtgctt 10199364  T
Q  214 atgtcagtagataaactcaaat 235  Q
    |||| ||||||||| |||||||    
T  10199363 atgttagtagataagctcaaat 10199342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 17603474 - 17603409
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataag 145  Q
    ||||||||||| ||||| | |||||| |||| || |||||||| |||||||| || ||||||||||    
T  17603474 taaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataag 17603409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 25479562 - 25479667
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttt 180  Q
    ||||||| ||| |||| | |||||| |||| |  ||||||||| | ||||  ||||||||||||| ||||||   ||||||||||||| |||| || |||    
T  25479562 aaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataatctattt 25479661  T
Q  181 tcataa 186  Q
    ||||||    
T  25479662 tcataa 25479667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 38247398 - 38247455
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    ||||||||||||||||| ||||  |||| |||  ||||||||||||| ||||||||||    
T  38247398 ataagctgttttcataagttctcccaaacagtgacacaaaacttatgccagtagataa 38247455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 2294891 - 2294963
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||| | ||||| |||||| | || |  ||| ||||||||||||| ||| ||||||||||||||||    
T  2294891 taaattgtttttggataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaa 2294963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 7472291 - 7472363
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||| ||||||  |||||| ||||    ||||||||||||||||  ||||||||||||| ||||||    
T  7472291 taaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaa 7472363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 27140478 - 27140578
Alignment:
Q  100 tataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaaga 199  Q
    |||||| |||| || ||||||||| ||||||  ||||| ||||||| ||||||   || ||| |||||| ||||||||||| | |||| ||| |||||||    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttccttaaactctctcaaaga 27140577  T
Q  200 g 200  Q
    |    
T  27140578 g 27140578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 27146313 - 27146189
Alignment:
Q  112 ttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaa 210  Q
    |||||| |||||||| |||| ||| |||| |||| ||||||   || ||||||| ||| ||||| ||||| | ||| ||||  |||  ||||||||||||    
T  27146313 ttgtaaactatcttgaagaacttacgaaagtaagttgaaaacagcttatgaacaatgtcataagttgtttccttaagttcttccaacaagtctcacaaaa 27146214  T
Q  211 cttatgtcagtagataaactcaaat 235  Q
    |||||| || ||||||| |||||||    
T  27146213 cttatgccaatagataagctcaaat 27146189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 208
Target Start/End: Complemental strand, 31517830 - 31517702
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtt 179  Q
    ||||||| |||| |||||| |||||| |||  |  ||| || |||||||||  ||||||||||||| ||||||   || |||||||||| || || ||||    
T  31517830 taaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgtt 31517731  T
Q  180 ttcataaattctatcaaagagtctcacaa 208  Q
    || |||| ||||  |||| ||||||||||    
T  31517730 ttgataagttctcccaaacagtctcacaa 31517702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 37517165 - 37517101
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaa 234  Q
    ||||||||||||| ||| |||| ||| | ||||||||||||||||||  |||| |||| ||||||    
T  37517165 ataagctgttttcgtaagttctttcatacagtctcacaaaacttatgcaagtatataagctcaaa 37517101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 47432076 - 47432147
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||| | ||| | ||||||||||| || |||| ||| ||| |||||||||||||||||| ||||||    
T  47432076 taaattgtttttgaatatgctataaggtgtt-ttataagttatattgaagaatttatgaaaataagctgaaaa 47432147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 402632 - 402476
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgt 178  Q
    |||||||||||||||||||||||||| |||| || ||| |||||||| |||| || ||||| |||| ||||||   || |||||| |||| |||||||||    
T  402632 taaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctgt 402533  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||  ||||  |||| |||||  |||||||||||| ||| |||||||||||||    
T  402532 tttcatacgttctcccaaacagtcttgcaaaacttatgttagttgataaactcaaat 402476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 21367647 - 21367803
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgt 178  Q
    ||||||||||||||||||  |||||| |||| |  ||||||||||||||||| ||||||||||||| ||||||   ||  ||||| |||| |||||||||    
T  21367647 taaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgt 21367746  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||| ||||  |||| |||| |||||||||||||   |||||||| |||||||    
T  21367747 tttcataagttctcccaaacagtcccacaaaacttatgctggtagataatctcaaat 21367803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 235
Target Start/End: Complemental strand, 39602289 - 39602145
Alignment:
Q  91 cgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattc 190  Q
    ||||||||||||||| |||| |  ||||||||||| ||||| ||||||||||||| ||||||    | |||||||||| ||||||||| |||||||  ||    
T  39602289 cgtataagttataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtcttcataagctc 39602190  T
Q  191 tatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |  |||| || ||||||||||| ||| |||||| ||| |||||||    
T  39602189 ttccaaatagcctcacaaaactgatgccagtagctaagctcaaat 39602145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 100 - 234
Target Start/End: Original strand, 39980729 - 39980864
Alignment:
Q  100 tataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaa-catgttataagctgttttcataaattctatcaaag 198  Q
    |||||| |||| || |||||||| |||||||| ||||||||||||| ||||||   || ||||| |  || ||||||||||||||||| |||| | |||     
T  39980729 tataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctcttaaac 39980828  T
Q  199 agtctcacaaaacttatgtcagtagataaactcaaa 234  Q
    ||||||||||||||||||  ||||||||| ||||||    
T  39980829 agtctcacaaaacttatgctagtagataagctcaaa 39980864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 30443873 - 30444029
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgt 178  Q
    ||||||| ||| ||||| | |||||| |||| || ||| |||| |||||||| ||||||||||||| ||||||   ||  |||| || || |||||||||    
T  30443873 taaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctgt 30443972  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||  |||| |||| |||||||| ||| ||||| |||||||||| |||||||    
T  30443973 tttcataagctctaccaaacagtctcaccaaatttatgccagtagataagctcaaat 30444029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 34610896 - 34610740
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgt 178  Q
    |||||| |||| ||| |||||||||| || | |  ||||||||||||| ||| |||||||||| || ||||||   || ||||||| ||| |||||| ||    
T  34610896 taaattatttttgtacaagttataagttgctttcataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaacaatgtcataagcagt 34610797  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||| ||||  |||| |||   ||||||||||||||||||||||| |||||||    
T  34610796 tttcataagttctcccaaatagttgtacaaaacttatgtcagtagataagctcaaat 34610740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 234
Target Start/End: Complemental strand, 3845617 - 3845498
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaaaactta 214  Q
    |||| |||||||||||| ||||||||||||| ||||||    | || || |||| |||| |||| |||| |  |||||||||| ||||||||||||||||    
T  3845617 taagttatcttggagaacttatgaaaataagctgaaaaaagattataaaaatgtcataatctgtcttcagatgttctatcaaacagtctcacaaaactta 3845518  T
Q  215 tgtcagtagataaactcaaa 234  Q
    || |||||||||| ||||||    
T  3845517 tgccagtagataagctcaaa 3845498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 18405825 - 18405765
Alignment:
Q  175 ctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||| ||||  |||| ||||||||||||||||||||||||||||| |||||||    
T  18405825 ctgttttcataagttcttgcaaacagtctcacaaaacttatgtcagtagataagctcaaat 18405765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 226
Target Start/End: Complemental strand, 53789551 - 53789406
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgt 178  Q
    |||| |||||| ||||| | |||||| |||| |  ||||||||| ||||||| |||||||| |||| ||||||   || ||||| | ||| |||||||||    
T  53789551 taaaatgttttggtatatgctataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaaaagtgtcataagctgt 53789452  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagata 226  Q
    || || || |||| ||||||  ||||||||||||||||||||||||||    
T  53789451 ttccaaaagttctctcaaag--tctcacaaaacttatgtcagtagata 53789406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 235
Target Start/End: Complemental strand, 24085414 - 24085272
Alignment:
Q  94 ataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattcta 192  Q
    ||||| |||||  |||| |||||||||||||||||||| || |||||||||| ||||||   |  ||||||| |   ||||||||||||||||| ||||     
T  24085414 ataagctataatttgtttttgtaagctatcttggagaacttgtgaaaataagctgaaaacagcgtatgaacagtaccataagctgttttcataagttctc 24085315  T
Q  193 tcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
      ||  |||||||||||||||||| | |||||||| |||||||    
T  24085314 caaaccagtctcacaaaacttatgccggtagataagctcaaat 24085272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 25447220 - 25447179
Alignment:
Q  194 caaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  25447220 caaacagtctcacaaaacttatgtcagtagataaactcaaat 25447179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 52618983 - 52619076
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataa 173  Q
    |||||||||||| ||||||||||||| |||| |   ||||||||||| |||  || ||||||||||||||||||  || |||||||||| ||||    
T  52618983 taaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatgaacatgtcataa 52619076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 31365355 - 31365243
Alignment:
Q  124 ttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagta 222  Q
    ||||||||||||||||||| || |||||| |  | ||||| || || ||||||||| ||||||| ||||  |||| ||| |||||||| ||||| || ||    
T  31365355 ttggagaatttatgaaaatgagttgaaaaagatttatgaaaattgtcataagctgtattcataagttctcccaaacagtgtcacaaaaattatgccaata 31365256  T
Q  223 gataaactcaaat 235  Q
    |||||||||||||    
T  31365255 gataaactcaaat 31365243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 49465720 - 49465644
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 191  Q
    ||||||||  ||||||| ||||| ||||||| | ||||  |||||||||||||| ||||||||||||||||| ||||    
T  49465720 taagctatactggagaacttatggaaataagcttaaaaaacctaatgaacatgtaataagctgttttcataagttct 49465644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 37389249 - 37389311
Alignment:
Q  165 atgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    |||| ||||| ||||||||||| ||||  | ||||||||||||||||||||||| ||||||||    
T  37389249 atgtcataagttgttttcataagttctcccgaagagtctcacaaaacttatgtctgtagataa 37389311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 3776390 - 3776325
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaa-aacttatgtcagtagataaactcaaa 234  Q
    ||||||||||||||||| |||| ||||| | ||||||||  ||||||| |||||||||||||||||    
T  3776390 ataagctgttttcataagttctctcaaacattctcacaattacttatgccagtagataaactcaaa 3776325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 22667419 - 22667539
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaaaa-ctt 213  Q
    ||||||||||||||||  ||| | ||||||| | |||||  ||  |||| |||||||| ||||||| |||||| ||| ||||| ||||||||||   |||    
T  22667419 taagctatcttggagagcttacggaaataagctaaaaataacttctgaa-atgttatatgctgtttccataaactctctcaaacagtctcacaagtgctt 22667517  T
Q  214 atgtcagtagataaactcaaat 235  Q
    |||||||||||||| |||||||    
T  22667518 atgtcagtagataagctcaaat 22667539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 22724058 - 22724178
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaaaa-ctt 213  Q
    ||||||||||||||||  ||| | ||||||| | |||||  ||  |||| |||||||| ||||||| |||||| ||| ||||| ||||||||||   |||    
T  22724058 taagctatcttggagagcttacggaaataagctaaaaataacttctgaa-atgttatatgctgtttccataaactctctcaaacagtctcacaagtgctt 22724156  T
Q  214 atgtcagtagataaactcaaat 235  Q
    |||||||||||||| |||||||    
T  22724157 atgtcagtagataagctcaaat 22724178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 31365187 - 31365122
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||| |||||||| ||||  |||| |||||||||||||||||| || ||||||| |||||||    
T  31365187 ataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagctcaaat 31365122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 46031009 - 46031126
Alignment:
Q  119 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgt 217  Q
    ||||||||||||| |||| |||||||| ||||||   || ||||| | ||| ||| ||||||||| ||| |||| | ||| ||||||| |||||||||      
T  46031009 ctatcttggagaacttattaaaataagctgaaaacagcttatgaataatgtcataggctgttttcgtaagttctctgaaacagtctcataaaacttataa 46031108  T
Q  218 cagtagataaactcaaat 235  Q
    || |||||||||||||||    
T  46031109 caatagataaactcaaat 46031126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 584118 - 584182
Alignment:
Q  171 taagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||||||||||||   ||| ||||||||| ||||||||  ||||||||| |||||||    
T  584118 taagctgttttcataaattctccaaaacagtctcacagaacttatgctagtagataagctcaaat 584182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 1217890 - 1217790
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtt 179  Q
    |||||||||||| | ||||||||||| |||| |  ||||||||| | ||||| |||||||| |||| ||||||   || ||| |||||| ||||||||||    
T  1217890 taaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgtt 1217791  T
Q  180 t 180  Q
    |    
T  1217790 t 1217790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 20880456 - 20880612
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgt 178  Q
    ||||||||||| ||||| | |||||  |||| ||  ||||||| |||||||| ||||||||||||| | ||||   || ||||| | ||| |||||||||    
T  20880456 taaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctgt 20880555  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||  ||||  |||| ||||| |  |||||||||  ||||||||| |||||||    
T  20880556 tttcataggttctcccaaatagtctaaggaaacttatgcaagtagataagctcaaat 20880612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 42799960 - 42799908
Alignment:
Q  176 tgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaa 228  Q
    ||||||||||| ||||  |||||||| ||||||||| ||||||||||||||||    
T  42799960 tgttttcataagttctcccaaagagtttcacaaaacatatgtcagtagataaa 42799908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 45541586 - 45541662
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 191  Q
    |||||||||||||| || |||||| |||||  ||||||   || |||||||||| ||||||||||||||||| ||||    
T  45541586 taagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgttttcataagttct 45541662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 47132311 - 47132383
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||| ||||| | |||| | |||| || |||||||| |||||||| ||||||||||||| ||||||    
T  47132311 taaattgtttttgtatatgctataggttgtttttataagctatattggagaagttatgaaaataagttgaaaa 47132383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 53952075 - 53952139
Alignment:
Q  127 gagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 191  Q
    |||| |||||||||||||| ||||||   || ||||||||||||| |||||||||||||| ||||    
T  53952075 gagagtttatgaaaataagctgaaaacagctcatgaacatgttatcagctgttttcataagttct 53952139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 23808119 - 23808048
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    |||||||||||||||| |||||||||||||| ||||||    |  ||||||||| |||||||| ||||||||    
T  23808119 taagctatcttggagagtttatgaaaataagatgaaaacaatttgtgaacatgtcataagctgctttcataa 23808048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 38902083 - 38902201
Alignment:
Q  117 agctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaacttat 215  Q
    |||||||||| |||| | ||||||||||| ||||||   |  ||||||| ||| ||| ||||||||||||||||||  |||| ||| |  ||||||||||    
T  38902083 agctatcttgaagaactcatgaaaataagttgaaaacaacgtatgaacaatgtcatatgctgttttcataaattcttccaaacagtttg-caaaacttat 38902181  T
Q  216 gtcagtagataaactcaaat 235  Q
    | |||||||||| |||||||    
T  38902182 gccagtagataagctcaaat 38902201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 20170706 - 20170648
Alignment:
Q  178 ttttcataaa-ttctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||| ||||| |||| |||||||| |||||||||||| ||||||| |||||||    
T  20170706 ttttcataaagttctaacaaacagtctcactaaacttatgtcactagataagctcaaat 20170648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 235
Target Start/End: Complemental strand, 33405160 - 33405126
Alignment:
Q  201 tctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||| ||||||||||||||||||||||||||||||    
T  33405160 tctcccaaaacttatgtcagtagataaactcaaat 33405126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 5391912 - 5391965
Alignment:
Q  133 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    ||||||||||||| ||||||   || |||||||||| |||||||||||||||||    
T  5391912 ttatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataa 5391965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 24684821 - 24684756
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||| ||||||||||| ||| | ||||  |||||| |||||||||| |||||||||| |||||||    
T  24684821 ataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaat 24684756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 35394553 - 35394516
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  35394553 taagctatcttgaagaatttatgaaaataagttgaaaa 35394516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 51929356 - 51929299
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    |||| ||||||||| ||||||| ||||| ||| |||||||||||||| ||||| ||||    
T  51929356 ataatctgttttcagaaattctctcaaatagtatcacaaaacttatgccagtaaataa 51929299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 54837045 - 54837000
Alignment:
Q  159 atgaacatgttataagctgttttcataaattctatcaaagagtctc 204  Q
    |||||||||| ||||||||||||||||||||||  |||| ||||||    
T  54837045 atgaacatgtcataagctgttttcataaattcttccaaacagtctc 54837000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 901939 - 902011
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtg-aaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    |||||||| |||||||| ||||||||||||| || |||| || ||  ||| ||||||| ||||||||||||||    
T  901939 taagctatattggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataa 902011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 5436120 - 5436208
Alignment:
Q  148 gaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||| || ||||||| ||| ||||| |||||||| || ||||   ||| ||| |||||||||||||| |||| |||||||||||||    
T  5436120 gaaaatggcttatgaacaatgtcataagttgttttcagaagttcttcaaaacagtgtcacaaaacttatgacagttgataaactcaaat 5436208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 5448544 - 5448580
Alignment:
Q  199 agtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  5448544 agtcttacaaaacttatgtcagtagataagctcaaat 5448580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 235
Target Start/End: Original strand, 26911699 - 26911727
Alignment:
Q  207 aaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||||||||||||||||||||    
T  26911699 aaaacttatgtcagtagataaactcaaat 26911727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 235
Target Start/End: Complemental strand, 36507142 - 36507026
Alignment:
Q  119 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaaa--acttatg 216  Q
    |||| ||||||||||||| |||||||| ||||||   || || |||| || ||||||| |||||| || | ||  |||| |||||||||||   |||||     
T  36507142 ctattttggagaatttataaaaataagctgaaaa--acttataaacacgtcataagctattttcagaagtcctcccaaacagtctcacaaagctcttata 36507045  T
Q  217 tcagtagataaactcaaat 235  Q
    |||||||||||||||||||    
T  36507044 tcagtagataaactcaaat 36507026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 38318992 - 38319044
Alignment:
Q  132 tttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcat 184  Q
    |||||| ||||||| |||||||  || |||||||||||||||| |||||||||    
T  38318992 tttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 38319044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 38665344 - 38665308
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaa 151  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  38665344 taagctatcttggagaatttatgaaaagaagttgaaa 38665308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 19302649 - 19302497
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgt 178  Q
    ||||||||||| ||||| |||||||| |||| || ||||||||     |||| ||||||||||||| ||||||    | ||||| || || |||||||||    
T  19302649 taaattgtttttgtatatgttataagttgtttttataagctata----agaacttatgaaaataagttgaaaaaagtttatgaaaattgtcataagctgt 19302554  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||||  |||| | ||||||||||||||||||||||||||| |||||||    
T  19302553 tttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctcaaat 19302497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 227
Target Start/End: Complemental strand, 19022655 - 19022527
Alignment:
Q  100 tataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctatcaaag 198  Q
    |||||| |||| || |||||||| |||||||| ||||||||||||| |||| |   || ||||| || || ||||| ||||||||||||||||  ||||     
T  19022655 tataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttgttttcataaattctcccaaac 19022556  T
Q  199 agtctcacaaaacttatgtcagtagataa 227  Q
    | |||||||||||| ||||||||||||||    
T  19022555 aatctcacaaaactcatgtcagtagataa 19022527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 227
Target Start/End: Original strand, 33678760 - 33678908
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgt 178  Q
    ||||| ||||| ||| ||| |||||| |||| |  |||||||||||||| || || |||||||||| ||||||   || ||||||| ||||||||| |||    
T  33678760 taaatggtttttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttataagttgt 33678859  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    |||||||| ||||  ||||  |||||||||||||||||  |||||||||    
T  33678860 tttcataagttctcccaaattgtctcacaaaacttatgcaagtagataa 33678908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 235
Target Start/End: Original strand, 44821940 - 44822094
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttt 180  Q
    |||||||||| |||||||||||||| |||| |  ||||||||  ||||||| ||||||||||||| ||||||   || ||  |||| || |||| |||||    
T  44821940 aaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaacttattgacattttttaagttgttt 44822039  T
Q  181 tcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    || | |  |||   ||| | |||||||||||||||||||| ||||||||||||||    
T  44822040 tcgtgaggtctgctaaacaatctcacaaaacttatgtcagcagataaactcaaat 44822094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 33601465 - 33601344
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    ||||||||||| ||||| |||||||  |||| ||||||   || ||||| | ||| ||||||||||||||||| ||||   |||||||||||||||||||    
T  33601465 taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaagagtctcacaaaactt 33601366  T
Q  214 atgtcagtagataaactcaaat 235  Q
    ||| || ||||||| |||||||    
T  33601365 atgccaatagataagctcaaat 33601344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 27863722 - 27863659
Alignment:
Q  172 aagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||| |||| ||||| |||||||    
T  27863722 aagctgttttcataagttctctcaaatagtctcacaaaacttatgccagtggataagctcaaat 27863659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 33602082 - 33601963
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    ||||||||||| ||||| |||||||  |||| |||||| | || ||||| | ||| ||||||||||||||||| || |   ||||||||||| |||||||    
T  33602082 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaactt 33601983  T
Q  214 atgtcagtagataaactcaa 233  Q
    ||| |||||||||| |||||    
T  33601982 atgccagtagataagctcaa 33601963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 47177616 - 47177681
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataag 145  Q
    |||||||||||| |||||| |||||| |||| |   ||||||||||||||||||||||||||||||    
T  47177616 taaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaataag 47177681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 227
Target Start/End: Complemental strand, 17944433 - 17944285
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgt 178  Q
    ||||||||||| ||||| ||| |||| |||| |  |||| ||||||||| ||||||||||| |||| ||||||   |  ||||| | ||| |||||||||    
T  17944433 taaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaaaagcatatgaaaagtgtcataagctgt 17944334  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    ||| |||| || | | ||| ||||||||||| |||||| ||||||||||    
T  17944333 ttttataagttgtctgaaacagtctcacaaagcttatgccagtagataa 17944285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 39907783 - 39907917
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtt 179  Q
    ||||||||||| ||||||| |||||  |||| |  ||| ||||||| ||||| | ||||||||||| ||||||   ||||||||||||  |||||||  |    
T  39907783 taaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaacatg-cataagctcat 39907881  T
Q  180 ttcataaattctatcaaagagtctcacaaaacttat 215  Q
    || | || |||| ||||| |||||||||||||||||    
T  39907882 tttacaagttctctcaaacagtctcacaaaacttat 39907917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 36517594 - 36517713
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    ||||||||||||||||| ||||||||||||  |||||||  || |||||| ||||   |||||||||| |||| ||||  |||| ||||| | |||||||    
T  36517594 taagctatcttggagaaattatgaaaataaactgaaaatagcttatgaacaatgt--caagctgttttaataagttctcccaaacagtcttagaaaactt 36517691  T
Q  214 atgtcagtagataaactcaaat 235  Q
    ||| |||||| ||| |||||||    
T  36517692 atgccagtagctaagctcaaat 36517713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 234
Target Start/End: Original strand, 420342 - 420495
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttt 180  Q
    ||||||||| ||||| | |||||| ||||   ||||||||| |||||||| ||||||||||||| |||||| | ||   ||| | ||| ||||  |||||    
T  420342 aattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataagttgaaaaaggctttagaaaactgtcataaattgttt 420441  T
Q  181 tcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaa 234  Q
    |||||| ||||  |||| ||||||||||| |||| | ||||||| || ||||||    
T  420442 tcataagttctcccaaacagtctcacaaagcttaagccagtagacaagctcaaa 420495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 34035932 - 34036053
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    ||||||||||| ||||| ||  ||||||||| ||||||   || ||||||| ||| ||||| | ||||||||| ||||  |||  |||||||||| || |    
T  34035932 taagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttcttccaagtagtctcacaatacat 34036031  T
Q  214 atgtcagtagataaactcaaat 235  Q
    |||||||||||||| |||||||    
T  34036032 atgtcagtagataagctcaaat 34036053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 48140270 - 48140335
Alignment:
Q  166 tgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactc 231  Q
    ||||| |||||||||||||| |||||  |||| ||||||||| |||||||| || |||||||||||    
T  48140270 tgttacaagctgttttcatacattctcccaaacagtctcacataacttatgccaatagataaactc 48140335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 18350798 - 18350738
Alignment:
Q  79 ctaaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaa 139  Q
    ||||||||||||||||||||||||||| |||| |  ||||||||| ||||||  |||||||    
T  18350798 ctaaattgttttcgtataagttataagctgttttcataagctatcatggagagcttatgaa 18350738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 20269556 - 20269628
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||| ||| | |||||||| |||| |  |||||| | |||||||||||||||||||||| ||||||    
T  20269556 taaattgtttttgtaaatgttataagttgttttactaagctgtattggagaatttatgaaaataagttgaaaa 20269628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 21568550 - 21568454
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctatcaaagagtctcacaaaa 210  Q
    |||||||| |||||||| ||||| || |||| ||||||   || ||||| || |||||||||||||||||||| ||||  |||| ||||||||||||    
T  21568550 taagctatattggagaacttatggaactaagttgaaaagagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaaaa 21568454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 46280362 - 46280290
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||| ||||| | |||||| |||| || |||||||| |||||||| ||||||||||| | ||||||    
T  46280362 taaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaa 46280290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 12110341 - 12110404
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataa 144  Q
    |||||||||| ||||||| |||||| |||| |  |||||||||||| |||| ||||||||||||    
T  12110341 aaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaataa 12110404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 28900794 - 28900751
Alignment:
Q  38 tgtgttataagctgcaaataagttgtttgtccgaatagggccta 81  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||    
T  28900794 tgtgttataagctgcaaataagttgtttatccaaataggtccta 28900751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 33266479 - 33266420
Alignment:
Q  176 tgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||| ||||||||  |||| ||| |||||||||||||||| |||||||| |||||||    
T  33266479 tgttttcgtaaattctcccaaatagtttcacaaaacttatgtcggtagataagctcaaat 33266420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 43648225 - 43648292
Alignment:
Q  85 tgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    |||||||||||| | |||||| |||| |  |||||||||||||||||  |||||||||||| ||||||    
T  43648225 tgttttcgtatatgatataagctgttttcataagctatcttggagaaaatatgaaaataagttgaaaa 43648292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 5569727 - 5569661
Alignment:
Q  79 ctaaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataag 145  Q
    |||||||||||| |||||||||||||| |||| |  |||| ||||||| |||| | |||||||||||    
T  5569727 ctaaattgttttggtataagttataagttgttttcataagttatcttgaagaactaatgaaaataag 5569661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 8094368 - 8094414
Alignment:
Q  162 aacatgttataagctgttttcataaattctatcaaagagtctcacaa 208  Q
    ||||||| |||||||||||||||||| ||| ||||| ||||||||||    
T  8094368 aacatgtcataagctgttttcataaaatctctcaaatagtctcacaa 8094414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 18765366 - 18765420
Alignment:
Q  181 tcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||| ||||  |||| ||||||||||||||||||||| ||||||| |||||||    
T  18765366 tcataagttctcccaaacagtctcacaaaacttatgtcaatagataagctcaaat 18765420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 18962644 - 18962590
Alignment:
Q  98 gttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||||||| |  |||||||||||||||   ||||||||||||||||||||    
T  18962644 gttataaggtgttttcataagctatcttggaggccttatgaaaataaggtgaaaa 18962590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 20526512 - 20526582
Alignment:
Q  165 atgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||| |||| |||||||||||| |||| ||||| |||||||||||| || |  || |||||||||||||||    
T  20526512 atgtgataaactgttttcataagttctctcaaacagtctcacaaaatttctaccaatagataaactcaaat 20526582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 233
Target Start/End: Complemental strand, 25670636 - 25670522
Alignment:
Q  120 tatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaa-aacttatgtc 218  Q
    |||||||||||  || |||||||||| ||||||    | || ||||||| ||||| ||||||||||| || | ||||| |||||||||| | ||||||||    
T  25670636 tatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcataagttttctcaaacagtctcacaagagcttatgtc 25670537  T
Q  219 agtagataaactcaa 233  Q
    | ||||||| |||||    
T  25670536 aatagataagctcaa 25670522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 27288014 - 27288060
Alignment:
Q  166 tgttataagctgttttcataaattctatcaaagagtctcacaaaact 212  Q
    ||||||||||||||||||||| ||||  |||| ||||||||||||||    
T  27288014 tgttataagctgttttcataagttcttccaaatagtctcacaaaact 27288060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 46280282 - 46280214
Alignment:
Q  170 ataagctgttttcataaa---ttctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||||||||    ||||  |||| ||||||||||||| |||||||| ||||||||||||||    
T  46280282 ataagctgttttcataataagttctcccaaacagtctcacaaaacatatgtcagcagataaactcaaat 46280214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 4970791 - 4970726
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||| ||||||||||| ||||  |||| |||||||||| ||||||||||  |||||| |||||||    
T  4970791 ataagttgttttcataagttctcccaaacagtctcacaagacttatgtcacgagataagctcaaat 4970726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 31338541 - 31338614
Alignment:
Q  133 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcac 206  Q
    |||||||||||||||||||| | || ||||| |||| | ||| | ||| |||||| ||| ||||||||||||||    
T  31338541 ttatgaaaataaggtgaaaacggctgatgaatatgtcaaaagttatttccataaactctctcaaagagtctcac 31338614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 48470115 - 48470180
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||||| ||||  |||| | ||||| ||||||||||||  ||||||| |||||||    
T  48470115 ataagctgttttcataagttctcccaaacaatctcataaaacttatgtctatagataagctcaaat 48470180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 25130143 - 25130067
Alignment:
Q  116 aagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattcta 192  Q
    ||||||||||||| ||||| |||||||| | ||||||   || |||||||||| |||| ||||||| | ||||||||    
T  25130143 aagctatcttggaaaatttctgaaaatatgctgaaaacagcttatgaacatgtcataaactgttttaaaaaattcta 25130067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 28210356 - 28210316
Alignment:
Q  44 ataagctgcaaataagttgtttgtccgaatagggcctaaat 84  Q
    |||||||||||||||||||||| ||| || |||||||||||    
T  28210356 ataagctgcaaataagttgtttatccaaacagggcctaaat 28210316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 191
Target Start/End: Original strand, 39967900 - 39968012
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgt 178  Q
    |||||||||||||||  || |||||| |||| |  ||||||||||  ||||| | ||||||||||| ||||||   || |||||| |||  |||||||||    
T  39967900 taaattgttttcgtactagctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaacaatgccataagctgt 39967999  T
Q  179 tttcataaattct 191  Q
    |||||||| ||||    
T  39968000 tttcataagttct 39968012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 10758256 - 10758199
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  10758256 ataagctgttttcataaattctatcaaacagtctcacaaaacttatgttagcagataa 10758199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 26771245 - 26771398
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgt 178  Q
    ||||||||||| ||||| | |||||| | || || |||| ||| || ||||| ||||||||||||| |||||| | ||  |||| || || |||||||||    
T  26771245 taaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataagttgaaaaaggcttttgaaaattgtcataagctgt 26771344  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactca 232  Q
    |||||||| ||||  |||| |||||||||||||||||| | |||||||| ||||    
T  26771345 tttcataagttctcccaaacagtctcacaaaacttatgcccgtagataagctca 26771398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 27028811 - 27028967
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatg-aacatgttataagctgt 178  Q
    ||||||||||  ||||| | |||||| |||| |  ||||||||||||||||  ||||||||||||| |||||||  || ||| || ||||  ||||||||    
T  27028811 taaattgtttgtgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctgt 27028910  T
Q  179 tttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||| || ||||  |||| | |||||| ||||||||| |||| |||||||||||||    
T  27028911 tttcagaatttctcccaaacaatctcactaaacttatgccagtggataaactcaaat 27028967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 35534612 - 35534547
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||||| || |||| ||||| ||||||||||||||||||| ||||||||| |||||||    
T  35534612 ataagctgttttcacaagttctctcaaacagtctcacaaaacttatgttagtagataagctcaaat 35534547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 1058126 - 1058011
Alignment:
Q  120 tatcttggagaatttatgaaaataaggtgaaaatgcctaatg-aacatgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtc 218  Q
    |||||||||||| |||||||||||||  |||||   |||||| || |||| |||||| ||||||| || ||||  |||| |||||||||||||||||||     
T  1058126 tatcttggagaacttatgaaaataagcggaaaa-aactaatgaaaaatgtcataagcagttttcaaaagttctcccaaacagtctcacaaaacttatgta 1058028  T
Q  219 agtagataaactcaaat 235  Q
    ||||||||| |||||||    
T  1058027 agtagataagctcaaat 1058011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 30251532 - 30251388
Alignment:
Q  92 gtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattc 190  Q
    ||||| |||||||| |||| |  ||||||||||||||  | ||||||||||||| || |||   || ||||| | ||  ||||||||||||| ||| |||    
T  30251532 gtatatgttataagctgttttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatgaaaaatgcaataagctgttttcgtaagttc 30251433  T
Q  191 tatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |  |||| |||||||| |||||||||||||||||||| |||||||    
T  30251432 tcccaaacagtctcacgaaacttatgtcagtagataagctcaaat 30251388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 28763435 - 28763496
Alignment:
Q  166 tgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    ||||||||||||||||||||| ||||  |||| ||||||||||||||||||| | |||||||    
T  28763435 tgttataagctgttttcataagttctcccaaacagtctcacaaaacttatgttactagataa 28763496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 2488018 - 2487942
Alignment:
Q  160 tgaacatgttataagctgttttcataaattctatcaaagagtctcacaa-aacttatgtcagtagataaactcaaat 235  Q
    ||||||||||||||| ||||||||||| ||||  |||| ||||||||||   ||||||||||||||| |||||||||    
T  2488018 tgaacatgttataagttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaat 2487942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 8062505 - 8062569
Alignment:
Q  81 aaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataag 145  Q
    ||||||||||| |||||| |||||| ||||||  ||||||||||| |||| ||||||||||||||    
T  8062505 aaattgttttcatataagctataagatgttctcataagctatcttagagagtttatgaaaataag 8062569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 43717928 - 43717868
Alignment:
Q  175 ctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||| ||||  |||| ||||||||||||||||||||| ||||||| |||||||    
T  43717928 ctgttttcataagttctcccaaatagtctcacaaaacttatgtcaatagataagctcaaat 43717868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 5069730 - 5069800
Alignment:
Q  133 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtct 203  Q
    ||||||||||||| |||||||| || |||||||||||||||| ||||| |||||  ||| ||||| |||||    
T  5069730 ttatgaaaataagctgaaaatgacttatgaacatgttataagatgtttccataagctctctcaaacagtct 5069800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 38648425 - 38648479
Alignment:
Q  173 agctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    ||||||||||||||  |||  |||| |||||||||||||||||||||||||||||    
T  38648425 agctgttttcataaggtctcccaaacagtctcacaaaacttatgtcagtagataa 38648479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 43504733 - 43504803
Alignment:
Q  82 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||||||| ||| ||| |||||| |||| || ||||||||||||||||| ||||| ||||||| ||||||    
T  43504733 aattgttttagtagaagctataagatgtttttataagctatcttggagaacttatggaaataagctgaaaa 43504803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 1930050 - 1930163
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    ||||||||||||| ||  || |||||||||| ||||||   || ||||||| ||| |||| ||||||||| || ||||  |||| | | |||||||||||    
T  1930050 taagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaaataatgtcacaaaactt 1930149  T
Q  214 atgtcagtagataa 227  Q
    ||||||||||||||    
T  1930150 atgtcagtagataa 1930163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 3537000 - 3536879
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaactt 213  Q
    |||| |||||||||||| ||||| ||||||| ||||||    | ||||||| ||| |||||||||||   |||||||| || || |||| |||||| |||    
T  3537000 taagatatcttggagaacttatggaaataagctgaaaacaatttatgaacaatgtcataagctgtttctgtaaattctctcgaatagtcacacaaagctt 3536901  T
Q  214 atgtcagtagataaactcaaat 235  Q
    ||| |||||||||| |||||||    
T  3536900 atgccagtagataagctcaaat 3536879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 9956897 - 9956832
Alignment:
Q  87 ttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaa 152  Q
    ||||| ||||||||||||| |||| |  ||| ||||||||||||| ||||||||||||| ||||||    
T  9956897 ttttcctataagttataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaa 9956832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 11376718 - 11376839
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaa-aactt 213  Q
    |||||||| || |||||| |||||||||||| ||||||      || ||||||| | ||||| ||||||||| ||||  |||| |||||||||| |||||    
T  11376718 taagctattttagagaatctatgaaaataagctgaaaacaagatattaacatgtcacaagctattttcataagttctcccaaatagtctcacaagaactt 11376817  T
Q  214 atgtcagtagataaactcaaat 235  Q
    || ||||||||||| |||||||    
T  11376818 atatcagtagataagctcaaat 11376839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 35749567 - 35749506
Alignment:
Q  172 aagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaa 233  Q
    ||||||||||||||| |||| ||||| || ||| |||||||||||||| ||||||| |||||    
T  35749567 aagctgttttcataagttctctcaaacagcctcgcaaaacttatgtcaatagataagctcaa 35749506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 38750428 - 38750493
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||| |||| |||||| |||| ||||| | ||||||||||||||||  |||||||||||||||||    
T  38750428 ataaggtgttctcataagttctttcaaataatctcacaaaacttatgcaagtagataaactcaaat 38750493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 15180616 - 15180675
Alignment:
Q  175 ctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||| |||||||  |||| ||||||| |||||||||| ||||||||||||||||||    
T  15180616 ctgttttcagaaattctc-caaaaagtctcataaaacttatggcagtagataaactcaaat 15180675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 233
Target Start/End: Complemental strand, 32841022 - 32840922
Alignment:
Q  134 tatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactca 232  Q
    |||||||||||| ||||||   || ||||||| ||| ||||| ||||||||||| ||||  |||| |||||| |||||||| ||| ||||||||| ||||    
T  32841022 tatgaaaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaacagtctcgcaaaacttgtgtgagtagataagctca 32840923  T
Q  233 a 233  Q
    |    
T  32840922 a 32840922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 11415147 - 11415262
Alignment:
Q  93 tataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattcta 192  Q
    ||||||||||| | |||| |  ||||||||| | |||| ||| |||||||||| ||| |||  || ||| |||||||||||||||||| |||||| |||     
T  11415147 tataagttatacgctgttttcataagctatcctagagagtttgtgaaaataagctgagaatagcttatggacatgttataagctgtttccataaactctc 11415246  T
Q  193 tcaaagagtctcacaa 208  Q
    | ||| | ||||||||    
T  11415247 taaaacaatctcacaa 11415262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 34290861 - 34290956
Alignment:
Q  92 gtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaa 187  Q
    ||||| |||||||| |||| || ||| ||||| |||||| || ||||||||||| |||||| | || ||| |||||| ||||||||| | ||||||    
T  34290861 gtatatgttataagttgtttttctaatctatcctggagagttaatgaaaataagctgaaaaaggcttatggacatgtaataagctgtctccataaa 34290956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 43368735 - 43368684
Alignment:
Q  135 atgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    ||||||||||| |||||||  ||||||||||||| ||||| |||||||||||    
T  43368735 atgaaaataagttgaaaatagctaatgaacatgtcataagttgttttcataa 43368684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 24558833 - 24558903
Alignment:
Q  80 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaa 150  Q
    |||||| |||||||||||| |||||| |||| |  |||||||||||||||| || ||| ||||||| ||||    
T  24558833 taaattattttcgtataagctataagttgttttcataagctatcttggagacttaatgtaaataagttgaa 24558903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 38602400 - 38602463
Alignment:
Q  170 ataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||  |||| ||||  |||| || |||||||||||||||||||||||||| |||||||    
T  38602400 ataagctgttt--ataagttctcccaaacagcctcacaaaacttatgtcagtagataagctcaaat 38602463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 42622890 - 42622936
Alignment:
Q  99 ttataaggtgttcttgtaagctatcttggagaatttatgaaaataag 145  Q
    ||||||| |||| || |||||||||||||||||||||| ||||||||    
T  42622890 ttataagttgtttttctaagctatcttggagaatttataaaaataag 42622936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 1058186 - 1058223
Alignment:
Q  1 taaaaatagcttatgtaatcttatacattagcgcttat 38  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  1058186 taaaaatagcttatgtaagcttatacataagcgcttat 1058223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 6525912 - 6525953
Alignment:
Q  194 caaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||| |||| |||||||||||||| |||||||||||||||||    
T  6525912 caaacagtcacacaaaacttatgttagtagataaactcaaat 6525953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 9130294 - 9130253
Alignment:
Q  194 caaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||| |||||||||||||||||| |||||||||| |||||||    
T  9130294 caaatagtctcacaaaacttatgccagtagataagctcaaat 9130253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 12851209 - 12851262
Alignment:
Q  133 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 186  Q
    |||||||||||||  |||||   || ||||||||||||||||||||||||||||    
T  12851209 ttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcataa 12851262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 12976279 - 12976348
Alignment:
Q  166 tgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||| |||||||| |||||| |||||  ||| ||||||||||| ||||||  ||||||||| |||||||    
T  12976279 tgttagaagctgttctcataagttctactaaacagtctcacaaaccttatgctagtagataagctcaaat 12976348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 13822035 - 13821986
Alignment:
Q  178 ttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataa 227  Q
    |||| ||||||| | ||||| ||||||||||||||||||||| |||||||    
T  13822035 tttttataaattttctcaaacagtctcacaaaacttatgtcactagataa 13821986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 27754419 - 27754520
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaaaactta 214  Q
    |||||||| |||||||  ||||||||||||| ||||     || || | ||||| |||| |||||||||||| ||||  |||| ||||||||||||||||    
T  27754419 taagctattttggagagcttatgaaaataagctgaacgcaacttataatcatgtcataaactgttttcataagttctcccaaatagtctcacaaaactta 27754518  T
Q  215 tg 216  Q
    ||    
T  27754519 tg 27754520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 41589653 - 41589722
Alignment:
Q  166 tgttataagctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||||| ||||||||||| ||||   ||| ||||||| ||| |||||||||||||| || |||||||    
T  41589653 tgttataagttgttttcataagttctccaaaacagtctcaaaaagcttatgtcagtagacaagctcaaat 41589722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 44236878 - 44236757
Alignment:
Q  115 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctatcaaagagtctcacaa-aactt 213  Q
    |||||||| |||||||  ||||||||||||| |||||||  || | || |||||  | |||| |||||||| |||||  | || ||||||||||   |||    
T  44236878 taagctatattggagagcttatgaaaataagctgaaaataacttaagagcatgtcgtgagctattttcatagattctcccgaacagtctcacaagtgctt 44236779  T
Q  214 atgtcagtagataaactcaaat 235  Q
    ||| ||||||||||||||||||    
T  44236778 atgccagtagataaactcaaat 44236757  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 12497066 - 12497006
Alignment:
Q  175 ctgttttcataaattctatcaaagagtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    ||||||| | || |||| ||||| |||||||||||||||||| ||| |||||| |||||||    
T  12497066 ctgtttttagaagttctctcaaacagtctcacaaaacttatgccaggagataagctcaaat 12497006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 30657747 - 30657711
Alignment:
Q  199 agtctcacaaaacttatgtcagtagataaactcaaat 235  Q
    |||||||||||| |||||||| |||||||||||||||    
T  30657747 agtctcacaaaatttatgtcattagataaactcaaat 30657711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 37822653 - 37822593
Alignment:
Q  176 tgttttcataaattctatcaaagagtctcacaaa-acttatgtcagtagataaactcaaat 235  Q
    |||||| ||||||| | ||||| ||||||||||| | |||||||| |||||||||||||||    
T  37822653 tgttttaataaattttctcaaacagtctcacaaataattatgtcattagataaactcaaat 37822593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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