View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13426_low_5 (Length: 271)
Name: NF13426_low_5
Description: NF13426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13426_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 259
Target Start/End: Complemental strand, 47494120 - 47493871
Alignment:
| Q |
15 |
caaagttctatcttttttcggagattgagatgaaatttgatgcattt--------gtgaatttttatgtacgaaaaaggaaagtgaagcagaagaggaat |
106 |
Q |
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| T |
47494120 |
caaagttctatcttttttcggagattgagatgaaatttgatgcattttattaattgtgaatttgtatgtacgaaaaaggaaagtgaagcggaagaggaat |
47494021 |
T |
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| Q |
107 |
ttaaggaagctttcagggtgttcgacaaagataaagatggttacatatcacccagtgaggtataattaattcaacatatataatttgttttgtcgtaccg |
206 |
Q |
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| T |
47494020 |
ttaaggaagctttcagggtgttcgacaaagataaagatggttacatatcacccagtgaggtataattaattcaacatatataatttgttttgttgtaccg |
47493921 |
T |
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| Q |
207 |
taatattgaactatataattgatattacgtgtgagcccagttgaggtcagtat |
259 |
Q |
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| T |
47493920 |
taa---tgaactatataattgatattacgtgtgagcccagttgaggtcagtat |
47493871 |
T |
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