View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13427_high_16 (Length: 324)

Name: NF13427_high_16
Description: NF13427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13427_high_16
NF13427_high_16
[»] chr2 (43 HSPs)
chr2 (16-324)||(45235829-45236135)
chr2 (177-320)||(14530295-14530439)
chr2 (178-320)||(10543676-10543819)
chr2 (177-320)||(23397743-23397883)
chr2 (177-320)||(8455332-8455474)
chr2 (177-320)||(17896236-17896379)
chr2 (177-320)||(44643499-44643642)
chr2 (195-320)||(10546157-10546282)
chr2 (177-324)||(4516363-4516509)
chr2 (177-320)||(11514413-11514554)
chr2 (195-320)||(14444724-14444847)
chr2 (175-323)||(99278-99423)
chr2 (180-320)||(19977730-19977869)
chr2 (177-320)||(25249754-25249895)
chr2 (172-320)||(9671152-9671298)
chr2 (177-316)||(21377093-21377231)
chr2 (177-320)||(39914322-39914464)
chr2 (177-320)||(24200639-24200783)
chr2 (177-305)||(12023950-12024076)
chr2 (178-320)||(5841006-5841149)
chr2 (177-320)||(25079733-25079876)
chr2 (180-320)||(21779277-21779414)
chr2 (177-320)||(17623541-17623683)
chr2 (272-319)||(31158456-31158503)
chr2 (197-316)||(32781308-32781426)
chr2 (177-320)||(7214511-7214655)
chr2 (223-320)||(30826060-30826154)
chr2 (178-302)||(5450263-5450387)
chr2 (177-320)||(14544040-14544185)
chr2 (261-320)||(23488541-23488602)
chr2 (223-320)||(40762250-40762346)
chr2 (264-320)||(24890474-24890530)
chr2 (264-320)||(25632572-25632628)
chr2 (276-320)||(34766330-34766374)
chr2 (264-320)||(36871555-36871610)
chr2 (177-320)||(17667979-17668121)
chr2 (265-323)||(24059009-24059067)
chr2 (231-317)||(26684639-26684725)
chr2 (266-324)||(31525771-31525829)
chr2 (180-316)||(17380257-17380391)
chr2 (275-316)||(33795359-33795400)
chr2 (275-320)||(40579765-40579810)
chr2 (264-320)||(24860004-24860060)
[»] chr7 (48 HSPs)
chr7 (177-320)||(47077871-47078011)
chr7 (176-320)||(10693089-10693230)
chr7 (177-320)||(32758238-32758378)
chr7 (177-320)||(2541035-2541178)
chr7 (177-320)||(35334832-35334972)
chr7 (177-320)||(42805501-42805645)
chr7 (177-320)||(21172025-21172165)
chr7 (172-320)||(40463849-40463995)
chr7 (177-320)||(29907394-29907537)
chr7 (177-320)||(33871926-33872067)
chr7 (177-320)||(42798646-42798788)
chr7 (177-320)||(42476850-42476990)
chr7 (182-320)||(42391116-42391251)
chr7 (205-320)||(7879643-7879757)
chr7 (177-320)||(11617604-11617746)
chr7 (177-320)||(19426906-19427047)
chr7 (177-320)||(23419690-23419832)
chr7 (177-319)||(34626225-34626365)
chr7 (177-316)||(13805079-13805216)
chr7 (198-316)||(16341276-16341394)
chr7 (177-316)||(28362165-28362303)
chr7 (199-316)||(18512473-18512588)
chr7 (180-317)||(28078151-28078286)
chr7 (177-316)||(43557449-43557589)
chr7 (177-320)||(48735138-48735279)
chr7 (195-320)||(38262212-38262336)
chr7 (177-320)||(19265792-19265932)
chr7 (264-316)||(27889336-27889388)
chr7 (179-316)||(47716438-47716576)
chr7 (177-320)||(3469191-3469337)
chr7 (177-320)||(27629611-27629753)
chr7 (177-315)||(19266427-19266564)
chr7 (177-317)||(5180174-5180315)
chr7 (175-218)||(6736865-6736908)
chr7 (177-296)||(8148985-8149104)
chr7 (177-312)||(14099030-14099164)
chr7 (177-312)||(14409047-14409181)
chr7 (177-320)||(22698983-22699128)
chr7 (223-317)||(38604550-38604642)
chr7 (177-316)||(39123867-39124010)
chr7 (177-243)||(44123713-44123779)
chr7 (211-314)||(2662958-2663057)
chr7 (177-242)||(7193062-7193127)
chr7 (195-320)||(18747481-18747606)
chr7 (272-320)||(33500586-33500634)
chr7 (276-320)||(45018939-45018983)
chr7 (177-298)||(46354171-46354293)
chr7 (177-289)||(48123531-48123642)
[»] chr8 (42 HSPs)
chr8 (178-320)||(29521701-29521842)
chr8 (177-320)||(13160679-13160820)
chr8 (177-320)||(28817642-28817784)
chr8 (177-320)||(36720773-36720915)
chr8 (177-320)||(35261656-35261798)
chr8 (177-320)||(12670266-12670406)
chr8 (177-320)||(45071242-45071383)
chr8 (177-320)||(39461010-39461154)
chr8 (177-320)||(44781520-44781664)
chr8 (177-320)||(30454113-30454253)
chr8 (177-317)||(8897783-8897922)
chr8 (177-320)||(20284085-20284231)
chr8 (177-316)||(24365079-24365218)
chr8 (177-320)||(2626496-2626641)
chr8 (206-316)||(5135309-5135418)
chr8 (177-320)||(21070713-21070860)
chr8 (177-320)||(44742534-44742677)
chr8 (177-320)||(12625866-12626009)
chr8 (177-320)||(44530126-44530268)
chr8 (177-320)||(26954109-26954254)
chr8 (177-313)||(20869523-20869654)
chr8 (180-320)||(18164776-18164914)
chr8 (223-320)||(29877117-29877213)
chr8 (196-317)||(36918120-36918240)
chr8 (273-317)||(28407475-28407519)
chr8 (211-318)||(8483956-8484062)
chr8 (223-320)||(19729365-19729459)
chr8 (177-320)||(22598134-22598275)
chr8 (177-320)||(6760799-6760943)
chr8 (177-320)||(7136543-7136687)
chr8 (272-320)||(16013527-16013575)
chr8 (264-320)||(26102580-26102636)
chr8 (177-320)||(17823553-17823695)
chr8 (182-320)||(31457155-31457291)
chr8 (199-320)||(389642-389764)
chr8 (177-320)||(25250499-25250643)
chr8 (177-243)||(28407393-28407459)
chr8 (177-317)||(24245428-24245565)
chr8 (179-252)||(30962857-30962929)
chr8 (223-320)||(20869946-20870044)
chr8 (276-320)||(27507985-27508029)
chr8 (264-320)||(40604922-40604977)
[»] chr1 (50 HSPs)
chr1 (172-320)||(14617033-14617180)
chr1 (177-316)||(18724565-18724703)
chr1 (177-324)||(46247965-46248111)
chr1 (177-320)||(27474281-27474422)
chr1 (177-320)||(23768336-23768478)
chr1 (177-320)||(46991804-46991946)
chr1 (177-320)||(34725114-34725254)
chr1 (177-320)||(47214511-47214651)
chr1 (177-320)||(32632573-32632714)
chr1 (177-320)||(6925100-6925242)
chr1 (195-320)||(35253203-35253325)
chr1 (177-316)||(18944643-18944783)
chr1 (177-320)||(27201647-27201791)
chr1 (176-320)||(38478298-38478439)
chr1 (264-320)||(45402182-45402238)
chr1 (178-320)||(45812553-45812692)
chr1 (177-320)||(18741973-18742119)
chr1 (177-320)||(35117781-35117926)
chr1 (177-312)||(41319830-41319964)
chr1 (177-320)||(20004106-20004250)
chr1 (177-320)||(30395742-30395886)
chr1 (177-320)||(19414439-19414579)
chr1 (177-320)||(2435802-2435945)
chr1 (264-320)||(4349724-4349780)
chr1 (177-316)||(11596513-11596650)
chr1 (198-320)||(45264415-45264537)
chr1 (175-320)||(19701568-19701713)
chr1 (176-314)||(25468285-25468422)
chr1 (179-320)||(9939463-9939606)
chr1 (177-320)||(12126853-12126993)
chr1 (180-324)||(8197046-8197189)
chr1 (195-320)||(10668243-10668369)
chr1 (276-320)||(33594147-33594191)
chr1 (195-320)||(35005141-35005267)
chr1 (177-312)||(20036220-20036355)
chr1 (271-320)||(6358215-6358264)
chr1 (264-317)||(43768225-43768278)
chr1 (175-316)||(44485129-44485269)
chr1 (264-320)||(1517327-1517383)
chr1 (264-316)||(15505650-15505702)
chr1 (264-320)||(23796551-23796607)
chr1 (264-324)||(31382226-31382286)
chr1 (272-320)||(42304223-42304271)
chr1 (272-320)||(50606497-50606545)
chr1 (178-319)||(18335305-18335445)
chr1 (271-320)||(43207589-43207638)
chr1 (264-320)||(10378751-10378807)
chr1 (177-320)||(17470363-17470504)
chr1 (209-316)||(31442409-31442517)
chr1 (264-320)||(35019316-35019371)
[»] chr5 (29 HSPs)
chr5 (177-320)||(24448867-24449009)
chr5 (177-320)||(38879558-38879702)
chr5 (177-320)||(43334179-43334323)
chr5 (177-317)||(27328729-27328870)
chr5 (177-320)||(41014296-41014437)
chr5 (177-320)||(35710290-35710430)
chr5 (195-320)||(32703419-32703541)
chr5 (258-320)||(16957371-16957433)
chr5 (177-312)||(8170008-8170140)
chr5 (205-318)||(43574611-43574723)
chr5 (180-320)||(12006344-12006485)
chr5 (276-320)||(39801591-39801635)
chr5 (172-313)||(2838750-2838890)
chr5 (177-316)||(22600431-22600569)
chr5 (177-320)||(4619120-4619264)
chr5 (271-317)||(10306493-10306539)
chr5 (274-320)||(25622533-25622579)
chr5 (177-243)||(37024646-37024712)
chr5 (178-243)||(22861758-22861823)
chr5 (264-320)||(7097776-7097832)
chr5 (177-320)||(28516449-28516592)
chr5 (248-320)||(30006372-30006444)
chr5 (225-320)||(16880663-16880757)
chr5 (223-320)||(5873338-5873433)
chr5 (211-320)||(19142959-19143066)
chr5 (177-320)||(208943-209085)
chr5 (264-320)||(13774928-13774984)
chr5 (272-320)||(21784348-21784396)
chr5 (264-320)||(34154830-34154886)
[»] chr4 (54 HSPs)
chr4 (223-320)||(25629072-25629168)
chr4 (177-320)||(5648236-5648377)
chr4 (177-318)||(6430644-6430783)
chr4 (177-320)||(30639357-30639498)
chr4 (177-320)||(40915806-40915947)
chr4 (180-317)||(17043413-17043549)
chr4 (177-324)||(14983811-14983957)
chr4 (183-313)||(7385499-7385628)
chr4 (177-324)||(16911539-16911687)
chr4 (177-320)||(21646941-21647085)
chr4 (177-320)||(44363146-44363290)
chr4 (177-320)||(54730226-54730371)
chr4 (177-320)||(20224961-20225101)
chr4 (177-320)||(48598841-48598981)
chr4 (177-320)||(35567147-35567289)
chr4 (177-316)||(47441550-47441688)
chr4 (223-320)||(20639674-20639771)
chr4 (195-320)||(41018810-41018933)
chr4 (177-320)||(11054164-11054304)
chr4 (177-320)||(47528546-47528686)
chr4 (181-320)||(19027829-19027967)
chr4 (177-320)||(16408617-16408761)
chr4 (177-318)||(39029078-39029219)
chr4 (194-320)||(47443951-47444076)
chr4 (190-320)||(29207914-29208041)
chr4 (264-320)||(30690192-30690248)
chr4 (275-318)||(44718641-44718684)
chr4 (179-318)||(49938611-49938746)
chr4 (177-316)||(54966998-54967135)
chr4 (177-283)||(14590814-14590920)
chr4 (274-320)||(33836503-33836549)
chr4 (274-320)||(38755924-38755970)
chr4 (271-320)||(20908652-20908701)
chr4 (178-243)||(23580300-23580365)
chr4 (264-317)||(51865057-51865110)
chr4 (272-324)||(16494290-16494342)
chr4 (177-318)||(25343164-25343306)
chr4 (272-320)||(30352596-30352644)
chr4 (272-316)||(47482870-47482914)
chr4 (180-320)||(54175043-54175184)
chr4 (223-320)||(7909296-7909392)
chr4 (195-320)||(9832329-9832451)
chr4 (273-320)||(11394924-11394971)
chr4 (273-320)||(11404651-11404698)
chr4 (177-320)||(23501770-23501908)
chr4 (265-316)||(32478811-32478862)
chr4 (265-320)||(38786673-38786728)
chr4 (264-315)||(49796860-49796911)
chr4 (274-320)||(8820581-8820627)
chr4 (186-316)||(25463108-25463237)
chr4 (231-320)||(30581481-30581571)
chr4 (271-316)||(21489158-21489203)
chr4 (275-320)||(32484307-32484352)
chr4 (275-320)||(40553953-40553998)
[»] scaffold0057 (3 HSPs)
scaffold0057 (177-320)||(46808-46950)
scaffold0057 (177-320)||(24788-24925)
scaffold0057 (271-317)||(46726-46772)
[»] chr3 (47 HSPs)
chr3 (177-320)||(40272828-40272970)
chr3 (179-320)||(13628806-13628948)
chr3 (177-317)||(46421054-46421195)
chr3 (177-320)||(13730618-13730762)
chr3 (175-320)||(34420659-34420804)
chr3 (177-317)||(8247706-8247847)
chr3 (177-320)||(26573126-26573268)
chr3 (177-315)||(12914056-12914193)
chr3 (177-320)||(29366736-29366880)
chr3 (177-320)||(22122933-22123073)
chr3 (177-320)||(39203515-39203655)
chr3 (223-320)||(54484735-54484832)
chr3 (177-320)||(22609765-22609906)
chr3 (177-316)||(26869706-26869843)
chr3 (177-285)||(45620879-45620987)
chr3 (177-320)||(1217089-1217229)
chr3 (177-320)||(6411838-6411979)
chr3 (177-320)||(16735440-16735581)
chr3 (186-320)||(516417-516553)
chr3 (195-319)||(54374362-54374486)
chr3 (264-320)||(25517186-25517242)
chr3 (175-318)||(25944466-25944609)
chr3 (177-320)||(33235529-33235672)
chr3 (177-320)||(53996581-53996724)
chr3 (181-320)||(7942993-7943131)
chr3 (269-320)||(44403571-44403622)
chr3 (205-320)||(45948854-45948968)
chr3 (177-243)||(7696977-7697043)
chr3 (273-323)||(10300585-10300635)
chr3 (177-243)||(10870043-10870109)
chr3 (264-318)||(52926237-52926291)
chr3 (179-320)||(5173735-5173876)
chr3 (177-319)||(9607202-9607345)
chr3 (206-320)||(10795439-10795554)
chr3 (177-320)||(829458-829600)
chr3 (264-320)||(34771380-34771436)
chr3 (272-320)||(40968611-40968659)
chr3 (210-320)||(43114884-43114995)
chr3 (211-320)||(31592882-31592988)
chr3 (195-320)||(33926100-33926224)
chr3 (224-320)||(45786230-45786327)
chr3 (264-320)||(31904872-31904929)
chr3 (211-320)||(14986990-14987100)
chr3 (264-320)||(15797305-15797361)
chr3 (264-320)||(24577920-24577976)
chr3 (264-320)||(24578010-24578066)
chr3 (177-229)||(53062037-53062089)
[»] scaffold0311 (1 HSPs)
scaffold0311 (177-320)||(10787-10929)
[»] chr6 (22 HSPs)
chr6 (177-316)||(12221935-12222075)
chr6 (177-320)||(1346941-1347081)
chr6 (177-320)||(1354773-1354913)
chr6 (183-320)||(29355871-29356009)
chr6 (177-320)||(3815093-3815235)
chr6 (165-320)||(32728173-32728326)
chr6 (177-320)||(9161100-9161243)
chr6 (272-320)||(12885984-12886032)
chr6 (176-320)||(2166426-2166571)
chr6 (176-320)||(2178059-2178204)
chr6 (264-319)||(32579488-32579543)
chr6 (268-317)||(18277212-18277261)
chr6 (264-320)||(13267788-13267844)
chr6 (177-320)||(15866055-15866195)
chr6 (273-321)||(24097649-24097697)
chr6 (264-315)||(383781-383832)
chr6 (274-320)||(6808468-6808514)
chr6 (271-319)||(10734922-10734970)
chr6 (271-319)||(11395831-11395879)
chr6 (177-314)||(14553489-14553626)
chr6 (264-320)||(23930143-23930199)
chr6 (285-317)||(29016301-29016333)
[»] scaffold0258 (1 HSPs)
scaffold0258 (172-320)||(13040-13186)
[»] scaffold0049 (1 HSPs)
scaffold0049 (177-320)||(58954-59098)
[»] scaffold0168 (1 HSPs)
scaffold0168 (177-320)||(30556-30696)
[»] scaffold0187 (2 HSPs)
scaffold0187 (177-314)||(10072-10206)
scaffold0187 (177-314)||(20400-20534)
[»] scaffold0005 (1 HSPs)
scaffold0005 (177-283)||(226458-226564)
[»] scaffold1176 (1 HSPs)
scaffold1176 (177-320)||(1603-1743)
[»] scaffold0180 (1 HSPs)
scaffold0180 (264-320)||(24149-24205)
[»] scaffold0018 (1 HSPs)
scaffold0018 (205-320)||(72883-72998)
[»] scaffold0015 (1 HSPs)
scaffold0015 (264-320)||(48650-48706)
[»] scaffold0223 (1 HSPs)
scaffold0223 (195-320)||(11126-11248)
[»] scaffold0031 (1 HSPs)
scaffold0031 (177-243)||(43106-43172)
[»] scaffold0254 (1 HSPs)
scaffold0254 (176-245)||(4133-4202)


Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 45236135 - 45235829
Alignment:
Q  16 ttttcaaccttatgcatgcattctctttgatgtttgaagtcctattcannnnnnnatgagagggtctcttctattcacctatactatctcaggagttagg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| |  | | |||    
T  45236135 ttttcaaccttatgcatgcattctctttgatgtttgaagtcctattcattttt--atgagagggtctcttctattcacctatactatctaaaaaataagg 45236038  T
Q  116 gcagggaactatgggcgtccctgcgtgtaaaatgtttttcacattttagttggtgtaaccagtaaagttgttgtcgtgcgactgaaagatcacgagttca 215  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  45236037 gcagggaactatgggcatccctgcgtgtaaaatgtttttcacattttagttggtgtaaccagtaaagttgttctcatgtgactgaaagatcacgagttca 45235938  T
Q  216 agttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctt 315  Q
    ||| ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  45235937 agtcctagaaacagtctcttctgtaaaataatagggtaaggctacgtgtaatacacaaaatggtgggaccccttaccagaccctacgtatgcaggagctt 45235838  T
Q  316 tagtgtacc 324  Q
    |||||||||    
T  45235837 tagtgtacc 45235829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 14530295 - 14530439
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa-- 274  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| | ||||| || ||||||| |||| || |||||||| ||      
T  14530295 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaa-aacagggtaaggctacgtacaatacaccaata 14530393  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||    
T  14530394 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 14530439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 320
Target Start/End: Original strand, 10543676 - 10543819
Alignment:
Q  178 taaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaaa 275  Q
    ||||||||||||| || ||||||||| ||||| |||||||| || ||||| | ||||| ||||||| || ||||||| |||  || ||||||||  ||||    
T  10543676 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaaaa 10543774  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||    
T  10543775 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 10543819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 23397743 - 23397883
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||| | |||||||| || ||||||| ||||| |||||||||   |||||| |||| || |||||||| ||||    
T  23397743 gtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaata---gggtaaggctacgtacaatacaccaaat 23397839  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||| | |||||||| |||||||||||| |||||    
T  23397840 ggtgggaccccttctcggaccctacatatgcgggagctctagtg 23397883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 8455474 - 8455332
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || ||||||| ||||| ||||||| |  ||||||| |||  || |||||||| ||||    
T  8455474 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacac-agggtaaggctgcgtacaatacaccaaat 8455376  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||||||| ||||||||||||    
T  8455375 ggtgggaccccttcccggaccctgcgtatgccggagctttagtg 8455332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 17896236 - 17896379
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||| ||||| |||||  ||||||| |||||||||  ||||| ||||||| |||||||||| |||  || ||||| || ||||    
T  17896236 gtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaaggctgcgtacaatataccaaat 17896335  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||| | |||||| |||||| |||||||||||||    
T  17896336 ggtgggaccccttctcggaccctgcgtatgtgggagctttagtg 17896379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 44643499 - 44643642
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||||||  || || ||||||||| ||||| |||||||||||||||| || |||||| |||||| || || |||| |||  || ||||  || ||||    
T  44643499 gtaaagttgtcatcatgtgactgaaaggtcacgtgttcaagttctagaaagagcctcttccgtaaaaaaacagagtaaggctgcgtacaatgtaccaaat 44643598  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||||    
T  44643599 ggtgggaccccttcccagaccctgcgtatgcgggagccttagtg 44643642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 10546157 - 10546282
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccag 294  Q
    ||||||||| ||||| |||||||| || ||||||  ||||| | ||||| || ||||||| |||  || |||||||| ||||||||||| |||||||| |    
T  10546157 gactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 10546256  T
Q  295 accctacgtatgcgggagctttagtg 320  Q
    ||||| ||||||||||||||||||||    
T  10546257 accctgcgtatgcgggagctttagtg 10546282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 324
Target Start/End: Complemental strand, 4516509 - 4516363
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||||||||||  | ||||||||| ||||   |||||||||||||||||| ||||| ||||||| || |||| || |||  || |||||||| || |    
T  4516509 gtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaa-aacagggcaacgctgcgtacaatacaccaatt 4516411  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtgtacc 324  Q
    ||||||| |||||||| |||||| |||||| || ||||||||||||||    
T  4516410 ggtgggaccccttcccggaccctgcgtatgtggaagctttagtgtacc 4516363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 11514413 - 11514554
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| |||||| | || ||||||| ||||| ||||||| || |  |||| |||  || |||||||| ||||    
T  11514413 gtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaa-aacaaagtaaggctgcgtacaatacaccaaat 11514511  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||    
T  11514512 ggtggga-cccttcccagaccctgcgtatgcgggagctttagtg 11514554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 14444724 - 14444847
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccag 294  Q
    ||||| ||| ||||| |||||||| || ||||||| ||||| |||||||  | ||||||| ||| ||| | |||||| ||||||||||| |||||||| |    
T  14444724 gactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--acagggtaaggctgtgtacgatacaccaaatggtgggaccccttcccgg 14444821  T
Q  295 accctacgtatgcgggagctttagtg 320  Q
    ||||| ||||||||||||||||||||    
T  14444822 accctgcgtatgcgggagctttagtg 14444847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 323
Target Start/End: Complemental strand, 99423 - 99278
Alignment:
Q  175 cagtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa 274  Q
    ||||||||||||||||  | ||||||||| ||||| |||||||| |||||||||| |||||  |||||| || | || || |||  || |||||||| ||    
T  99423 cagtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctctt--gtaaaa-aacatggcaaggctgcgtacaatacaccaa 99327  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtgtac 323  Q
    ||||||| | |||||| ||||||||  ||||||||||||||||||||||    
T  99326 atggtggaaccccttctcagaccctgtgtatgcgggagctttagtgtac 99278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 320
Target Start/End: Complemental strand, 19977869 - 19977730
Alignment:
Q  180 aagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggt 279  Q
    ||||||||||| || ||| ||||| ||||| ||||||||||| ||||||| ||||| ||||||| |||||| ||| | |  || |||||||| |||||||    
T  19977869 aagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaa-aataggataaggttgcgtacaatacaccaaatggt 19977771  T
Q  280 gggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||| ||||||||  ||| |  |||||||||||||||||||    
T  19977770 gggatcccttcccgaaccttgtgtatgcgggagctttagtg 19977730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 25249895 - 25249754
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| ||||||||  | ||||||||||||| |||| ||  | ||||||| |||  || |||||||| ||||    
T  25249895 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtacaa--acagggtaaggctgcgtacaatacaccaaat 25249798  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||||  ||||| |||||||| |||||||||||    
T  25249797 ggtgggatcccttcccgaaccctgcgtatgcgtgagctttagtg 25249754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 320
Target Start/End: Original strand, 9671152 - 9671298
Alignment:
Q  172 aaccagtaaagttgttgtcgtgcgactg-aaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaataca 270  Q
    |||| |||||||||||||| || ||||| |||  ||||| |||||| | || ||||||| ||||| ||||||| |   |||||| |||  || |||||||    
T  9671152 aaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgtaaaaca---gggtaaggctgcgtacaataca 9671248  T
Q  271 caaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    | ||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  9671249 ccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 9671298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 316
Target Start/End: Complemental strand, 21377231 - 21377093
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| | ||||||||||||  ||||||||  ||||| ||||||| || ||||||| |||  || |||| ||| ||||    
T  21377231 gtaaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaa-aacagggtaaggctgggtacaatgcaccaaat 21377133  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||| ||||||||  ||||| |||||| |||||||||    
T  21377132 ggtgggaccccttcccgaaccctgcgtatgtgggagcttt 21377093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 39914464 - 39914322
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| | |||||| || ||||||  ||||| ||||||| || ||||||| | | ||| ||||||||  |||    
T  39914464 gtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaaacagggtaaggatgtgtacaatacaccgaat 39914365  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||| || |||||| ||||||||||||||||||||    
T  39914364 ggtgggacccctt-cctgaccctgcgtatgcgggagctttagtg 39914322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 24200783 - 24200639
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||||||  ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| |||  || ||||||||  |||    
T  24200783 gtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaaa 24200685  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| ||||||  ||||| | |||||||||||    
T  24200684 atggtgggaacccttcccggaccctgagtatgtgagagctttagtg 24200639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 305
Target Start/End: Complemental strand, 12024076 - 12023950
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| ||||||  || ||||||| |||  || |||||||| ||||    
T  12024076 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaa--aacagggtaaggctgcgtacaatacaccaaat 12023979  T
Q  277 ggtgggagcccttcccagaccctacgtat 305  Q
    ||||||| ||| |||| |||||| |||||    
T  12023978 ggtgggaccccctcccggaccctgcgtat 12023950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 320
Target Start/End: Original strand, 5841006 - 5841149
Alignment:
Q  178 taaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaataca-caa-aa 275  Q
    ||||||||||||| || ||||| ||| ||||| |||||||| |||||||||| || || ||||||| |||||||||| | |  || ||||||| ||| ||    
T  5841006 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaa-aatagggtaaggatgcgtacaatacatcaataa 5841104  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| |||||||| |||||  | ||||||||||||||||||    
T  5841105 tggtgggaccccttcccggaccccgcatatgcgggagctttagtg 5841149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 25079876 - 25079733
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| ||||||||  ||||||||  ||||| ||||||| || | ||||| | |  || ||||||||  |||    
T  25079876 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaaacaaggtaaggatgcgtacaatacaccgaat 25079777  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| |||||||  |||||||||||    
T  25079776 ggtgggaccccttcccggaccctgcgtatgcaagagctttagtg 25079733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 320
Target Start/End: Complemental strand, 21779414 - 21779277
Alignment:
Q  180 aagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggt 279  Q
    ||||||||||| || ||||||||| ||||| |||||||| || || |||| ||||| ||||||| |   |||||| | |  || |||||||| |||||||    
T  21779414 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgtaaaaca---gggtaaggttgcgtacaatacaccaaatggt 21779318  T
Q  280 gggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||| |||||||| |||||| | |||||||||||| |||||    
T  21779317 gggaccccttcccggaccctgcatatgcgggagctctagtg 21779277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 17623541 - 17623683
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| |||||||| ||| ||||| |||||||| || ||||||  ||||| ||||||| |  ||||||| |||  || |||||||| ||||    
T  17623541 gtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaa-atcagggtaaggctgcgtacaatacaccaaat 17623639  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||| | ||||||||  | ||| |||||| || ||||||||||    
T  17623640 ggtggaaccccttcccgaatcctgcgtatgtggaagctttagtg 17623683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 319
Target Start/End: Complemental strand, 31158503 - 31158456
Alignment:
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagt 319  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  31158503 aaaatggtgggaccccttcccagaccctgcgtatgcgggagctttagt 31158456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 316
Target Start/End: Complemental strand, 32781426 - 32781308
Alignment:
Q  197 ctgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagac 296  Q
    ||||||| ||||||||||||||    ||||||  ||||| ||||||| || |||||||  ||  || |||||||| ||||||||||| ||||||||||||    
T  32781426 ctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaa-aacagggtaagactgcgtacaatacaccaaatggtgggaccccttcccagac 32781328  T
Q  297 cctacgtatgcgggagcttt 316  Q
    |||  |||||||||||||||    
T  32781327 cctgtgtatgcgggagcttt 32781308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 7214511 - 7214655
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||||||| ||| | ||||||||  | ||||||||||||| |||||||| | ||||||| |||  || ||||||||  |||    
T  7214511 gtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaat-acagggtaaggctgcgtacaatacacaaaaa 7214609  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||| || |||||| | ||| || |||||||| ||| |||||||    
T  7214610 atggtgagatcccttctcggacactgcgtatgcgagagttttagtg 7214655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 320
Target Start/End: Original strand, 30826060 - 30826154
Alignment:
Q  223 gaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||| |||||||  ||||||||| | |  || |||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  30826060 gaaacagcctcttgtgtaaaa--atagggtaaggttgcgtacaatacaccaaatggtggaa-cccttcccagaccctacatatgcgggagctttagtg 30826154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 302
Target Start/End: Original strand, 5450263 - 5450387
Alignment:
Q  178 taaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatg 277  Q
    ||||||||||||| || ||||||||| ||||| |||||| | || ||||||  ||||| ||||||| || | ||||| |||  || |||||||| ||| |    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggtaaggctgcgtacaatacaccaaagg 5450362  T
Q  278 gtgggagcccttcccagaccctacg 302  Q
    |||||| |||||||  |||||||||    
T  5450363 gtgggaccccttcctggaccctacg 5450387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 14544040 - 14544185
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaata--cacaaa 274  Q
    |||||||||||||| || ||||||||| | ||  || || || || ||||||| ||||| |||| || || |||||||  ||  ||||||||  || |||    
T  14544040 gtaaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgtagaaaaacagggtaagactgcgtgcaataaccaaaaa 14544139  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||| ||| |||||||  |||||| ||||||||||||||||||||    
T  14544140 atggtcggaccccttccgggaccctgcgtatgcgggagctttagtg 14544185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 23488541 - 23488602
Alignment:
Q  261 gtgcaatacacaaaa--tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||||||||  |||||||| |||||||| |||||| |||||||| |||||||||||    
T  23488541 gtgcaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgagagctttagtg 23488602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 320
Target Start/End: Complemental strand, 40762346 - 40762250
Alignment:
Q  223 gaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||| ||||||| | | |||||| |||| || |||||||| ||||||||||| || ||||  |||||| |||||| |||||||||||||    
T  40762346 gaaacagcctcttgtgtaaaaaact-gggtaaggctacgtacaatacaccaaatggtgggaccctttcctggaccctgcgtatgtgggagctttagtg 40762250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 24890474 - 24890530
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| || |||||||| |||||||| |||||| ||||||| ||||||||||||    
T  24890474 caatacaccaattggtgggaccccttcccggaccctgcgtatgcaggagctttagtg 24890530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 25632572 - 25632628
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| |||||||||||  |||||||  ||| ||||||||||||||||||||||    
T  25632572 caatacaccaaatggtgggattccttcccgaaccttacgtatgcgggagctttagtg 25632628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 34766330 - 34766374
Alignment:
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||    
T  34766330 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 34766374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 36871555 - 36871610
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| |||||||| || ||| ||||||||||||||||||||    
T  36871555 caatacaccaaatggtgggaccccttcccgga-cctgcgtatgcgggagctttagtg 36871610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 17667979 - 17668121
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || |||| |  ||||| ||||||| |  ||||||| |||  || |||||||| ||||    
T  17667979 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaa-atcagggtaaggctgcgtacaatacaccaaat 17668077  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||| | |||||| |  ||||| |||||  |||||||||||||    
T  17668078 ggtggaaccccttctcgaaccctgcgtatatgggagctttagtg 17668121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 323
Target Start/End: Complemental strand, 24059067 - 24059009
Alignment:
Q  265 aatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtgtac 323  Q
    ||||||| | ||||||||| ||||| || |||||| |||||| ||||||||||||||||    
T  24059067 aatacaccatatggtgggacccctttccggaccctgcgtatgtgggagctttagtgtac 24059009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 26684725 - 26684639
Alignment:
Q  231 ctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    ||||| ||||||| |||| ||||| |||  || ||||| || ||||||||||| | ||||||  ||||| |||||||||||||||||    
T  26684725 ctcttgtgtaaaaaaatatggtaaggctgcgtacaatatactaaatggtgggacctcttcccgaaccctgcgtatgcgggagcttta 26684639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 31525771 - 31525829
Alignment:
Q  266 atacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtgtacc 324  Q
    |||||| ||||| ||||| || || ||||||||| | ||||||||||||||||||||||    
T  31525771 atacaccaaatgatgggaccctttgccagaccctgcatatgcgggagctttagtgtacc 31525829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 316
Target Start/End: Complemental strand, 17380391 - 17380257
Alignment:
Q  180 aagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggt 279  Q
    ||||||||||| || ||| ||||| ||||| ||||||||  | ||||||  ||||| |||| ||  | ||||||| | | |||||||||||| ||||| |    
T  17380391 aagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataa--acagggtaaggttgtgtgcaatacaccaaatgat 17380294  T
Q  280 gggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    || | |||||||  |||||| || |||||||||||||    
T  17380293 ggaaccccttcctggaccctgcggatgcgggagcttt 17380257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 33795359 - 33795400
Alignment:
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||||| |||||||||||||||  |||||||||||||||    
T  33795359 atggtgggaccccttcccagaccctgtgtatgcgggagcttt 33795400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 40579810 - 40579765
Alignment:
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| ||||||  |||||||||||||||||||    
T  40579810 atggtgggaccccttcccggaccctgagtatgcgggagctttagtg 40579765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 24860060 - 24860004
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||| | | |||||| | |||||| ||||||||||||||||||||    
T  24860060 caatacaccaaatggtagaaccccttctcggaccctgcgtatgcgggagctttagtg 24860004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 4e-29; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 47078011 - 47077871
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||||||||| |||||||||   | |||||| |  || |||||||||||||    
T  47078011 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaata---gagtaaagttgcgtacaatacacaaaat 47077915  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||||| ||||||| |||||||||||| |||||    
T  47077914 ggtgggaccccttcccaaaccctacatatgcgggagctctagtg 47077871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 320
Target Start/End: Complemental strand, 10693230 - 10693089
Alignment:
Q  176 agtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaa 275  Q
    ||||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| |||||   || ||||||| |||  || |||||||| |||    
T  10693230 agtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa---aagagggtaaggctgcgtacaatacaccaaa 10693134  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| |||||||| |||||| | |||||||||||| |||||    
T  10693133 tggtgggaccccttcccggaccctgcatatgcgggagctctagtg 10693089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 32758238 - 32758378
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||  |||||||| || ||||||| ||||| ||||||| |   |||||| ||| ||| |||||||| ||||    
T  32758238 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaca---gggtaaggctgtgtacaatacaccaaat 32758334  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| | |||||||||||| |||||    
T  32758335 ggtgggaccccttcccggaccctgcatatgcgggagctctagtg 32758378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 2541178 - 2541035
Alignment:
Q  177 gtaaagttgttgtcgtgcgactg-aaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaa 275  Q
    |||||||||||||| || ||||| |||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| |||  || | |||||| |||    
T  2541178 gtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtactatacaccaaa 2541080  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| |||||||| | |||| ||||||||||||||||||||    
T  2541079 tggtgggaccccttcccggtccctgcgtatgcgggagctttagtg 2541035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 35334972 - 35334832
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| |||||||||||||| || ||||||||||| |  |||||| || |||||||  || ||| ||||||||  |||    
T  35334972 gtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacagtctcgt--gtaaaa-aacagggtaagactgtgtacaatacaccgaat 35334876  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||||||| ||||||||||||    
T  35334875 ggtgggaccccttcccggaccctgcgtatgcaggagctttagtg 35334832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 42805501 - 42805645
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| ||| ||| ||||||||  | |    
T  42805501 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgtgtacaatacaccaata 42805599  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||||  | ||||||||||||||||||    
T  42805600 atggtgggaccccttcccggaccccgcatatgcgggagctttagtg 42805645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 21172165 - 21172025
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| ||  |||||||| ||||| |||||||| || ||||||| ||||| ||||||| |   |||||| |||  || |||||||| ||||    
T  21172165 gtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaat 21172069  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| | |||||||||||| |||||    
T  21172068 ggtgggaccccttcccggaccctgcatatgcgggagctctagtg 21172025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 320
Target Start/End: Original strand, 40463849 - 40463995
Alignment:
Q  172 aaccagtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac 271  Q
    |||| |||||||||||||| || ||||| ||| ||||| ||||||||  ||||||||||||||| ||||||  ||  |||||| |||  ||  |||||||    
T  40463849 aaccggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgtaaa--aactgggtaaggctgcgtataatacac 40463946  T
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
     ||||||||||| |||||| | |||||| ||||||||||||||| ||||    
T  40463947 caaatggtgggaccccttctcggaccctgcgtatgcgggagcttcagtg 40463995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 29907394 - 29907537
Alignment:
Q  177 gtaaagttgttgt--cgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aa 273  Q
    |||||||||||||  | || ||||||||| ||||| |||||||| |||||||||| ||||| ||||||| ||||| |||| |||  || |||||||| ||    
T  29907394 gtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaa-aatagtgtaaggctgcgttcaatacaccaa 29907492  T
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||| ||| |||| ||||||  |||||||||||||||||||    
T  29907493 aatggtgggaccccatcccggaccct--gtatgcgggagctttagtg 29907537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 33872067 - 33871926
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| || || |||||||| || ||||||  ||||| |||||||  | ||| ||| |||  || |||||||| ||||    
T  33872067 gtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaa--acaggataaggctgcgtacaatacaccaaat 33871970  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||||||||||  ||||||| |||||||||||    
T  33871969 ggtgggaccccttcccagaccctgtgtatgcgagagctttagtg 33871926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 42798646 - 42798788
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| ||||||||  | ||||||||||||| ||||||| || | ||||| |||  || |||||||| ||||    
T  42798646 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaa-aacaaggtaaggctgcgtacaatacaccaaat 42798744  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| || ||||| |||||| | |||||||||||| |||||    
T  42798745 ggtgggaccctttcccggaccctgcatatgcgggagctatagtg 42798788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 42476850 - 42476990
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || |||| |||| |||||  |||||||||| ||||||||||||| ||||||| ||   ||||| |||  || |||||||| ||||    
T  42476850 gtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaaaacaa---ggtaaggctgcgtacaatacaccaaat 42476946  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||| || | || | |||||||||||| |||||    
T  42476947 ggtgggaccccttcctaggctctgcatatgcgggagctctagtg 42476990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 320
Target Start/End: Complemental strand, 42391251 - 42391116
Alignment:
Q  182 gttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgg 281  Q
    ||||||||| || ||||||||| ||||| |||||||| || |||||||  |||| ||||||| |   |||||| |||  || |||||||| |||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaatggtgg 42391155  T
Q  282 gagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    || |||||||| |||||| | |||||||||||| |||||    
T  42391154 gaccccttcccggaccctgcatatgcgggagctctagtg 42391116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 320
Target Start/End: Original strand, 7879643 - 7879757
Alignment:
Q  205 tcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgta 304  Q
    ||||| |||||||| || |||||| |||||| ||||||| || | ||||| |||  || |||||||| ||||||||||| |||||||| |||||| ||||    
T  7879643 tcacgggttcaagtcctggaaacaatctcttgtgtaaaa-aacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgta 7879741  T
Q  305 tgcgggagctttagtg 320  Q
    ||||||||||| ||||    
T  7879742 tgcgggagcttcagtg 7879757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 11617746 - 11617604
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||  |||||||| || ||||||  ||||| ||||||| || |||||||  ||  || |||||||| ||||    
T  11617746 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaa-aacagggtaagactgcgtacaatacaccaaat 11617648  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||  |||||| ||||||| ||| ||||||||    
T  11617647 ggtgggaccccttcctggaccctgcgtatgcaggacctttagtg 11617604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 19427047 - 19426906
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||| ||||| ||||| |||||||| || ||||||| ||||| ||||||| ||||||||||  ||  || |||||||| ||||    
T  19427047 gtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aatagggtaagactgcgtacaatacaccaaat 19426949  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||| | |||||| | |||||| |||||| ||||    
T  19426948 ggtggga-cccttctcggaccctgcatatgcgagagcttcagtg 19426906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 23419832 - 23419690
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||||| |||| || |||| |||| ||||  ||||||||||| ||||||| ||||| ||||||| || |||||||  ||  || |||||||| ||||    
T  23419832 gtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaa-aacagggtaagactgcgtacaatacaccaaat 23419734  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||| ||||| | ||| |||||| |||||||||    
T  23419733 ggtgggaccccttcctagaccttgcgtgtgcgggggctttagtg 23419690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 319
Target Start/End: Complemental strand, 34626365 - 34626225
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || || ||||||  |||   ||||||| || ||||||| ||| | |||||||  | ||||||| |||  || |||||||| ||||    
T  34626365 gtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgtaaaa--acagggtaaggctgcgttcaatacaccaaat 34626268  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagt 319  Q
    ||||||| |||||||| |||||| |||||||||||||||||||    
T  34626267 ggtgggatcccttcccggaccctgcgtatgcgggagctttagt 34626225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 316
Target Start/End: Original strand, 13805079 - 13805216
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| | ||| |||||||| || |||| || ||||  ||||||| |   |||||| ||| ||| |||||||| ||||    
T  13805079 gtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgtaaaacag--gggtaaggctgtgtacaatacaccaaat 13805176  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||| | |||||  |||||| ||||||||||||||||    
T  13805177 ggtgggaccacttcctggaccctgcgtatgcgggagcttt 13805216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 16341276 - 16341394
Alignment:
Q  198 tgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaataca-caaaatggtgggagcccttcccagac 296  Q
    |||||| ||||| ||||||||||||||||||| ||||| ||||||| || ||||||| |||| || ||||||| ||||||||||||  | |||||| |||    
T  16341276 tgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaa-aacagggtaaggctacgtacaatacaccaaaatggtgggccctcttcccggac 16341374  T
Q  297 cctacgtatgcgggagcttt 316  Q
    |   | ||||||||||||||    
T  16341375 ctatcatatgcgggagcttt 16341394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 316
Target Start/End: Complemental strand, 28362303 - 28362165
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || | ||||||| ||||  |||||||| |||||||| | ||||| ||||||| | | || ||| |||  || |||||||| ||||    
T  28362303 gtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttgg-taaggctgcgtacaatacaccaaat 28362205  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||| ||||||||||||| | | |||| |||||||||    
T  28362204 ggtgggaccccttcccagaccttgcatatgtgggagcttt 28362165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 316
Target Start/End: Complemental strand, 18512588 - 18512473
Alignment:
Q  199 gaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccc 298  Q
    ||||| ||||| |||||||| || ||||||   |||| |||||||  ||||||||| |||  || ||||||||  |||||||||| |||||||| |||||    
T  18512588 gaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaa--atagggtaaggctgcgtacaatacaccgaatggtgggaccccttcccggaccc 18512491  T
Q  299 tacgtatgcgggagcttt 316  Q
    | ||||||||||||||||    
T  18512490 tgcgtatgcgggagcttt 18512473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 28078286 - 28078151
Alignment:
Q  180 aagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggt 279  Q
    ||||||||||| || ||||| ||| ||||| |||||||| ||||||||||||||   ||||||| || ||||||| | |   |||||||||| |||||||    
T  28078286 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagtctc--gtgtaaaaaaacagggtaaggttgcatgcaatacaccaaatggt 28078189  T
Q  280 gggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    |||| ||||||||  | ||| | |||||| ||||||||    
T  28078188 gggaccccttcccgaatcctgcatatgcgagagcttta 28078151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 316
Target Start/End: Original strand, 43557449 - 43557589
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||||||| ||| | |||||||| || ||||||| ||||| ||||||| || || |||| |||  || ||||||||  | |    
T  43557449 gtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagagtaaggctgcgtacaatacaccaata 43557547  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||||| ||| |||| ||| || ||||||||||||||||    
T  43557548 atggtgggaccccctcccggactctgcgtatgcgggagcttt 43557589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 48735279 - 48735138
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctag-aaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaa 275  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || | |||||  ||||| ||||||| |    ||||| |||  || |||||||| |||    
T  48735279 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgtaaaacac---ggtaaggctgcgtacaatacaccaaa 48735183  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| |||||||| |||||| | |||||||||||| |||||    
T  48735182 tggtgggaccccttcccggaccctgcatatgcgggagctctagtg 48735138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 320
Target Start/End: Complemental strand, 38262336 - 38262212
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccag 294  Q
    ||||| ||| ||||| |||||||| || ||||||||||||| ||||||| |||| ||||| | |   | |||||||| ||||| ||||| ||||||||      
T  38262336 gactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa-aatatggtaatgttgcatacaatacaccaaatgatgggaccccttcccga 38262238  T
Q  295 accctacgtatgcgggagctttagtg 320  Q
    || || ||||||||||||||||||||    
T  38262237 acactgcgtatgcgggagctttagtg 38262212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 19265792 - 19265932
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||||||||||  | ||||||||| ||||| ||||||||  | || |||| | ||| ||||||  || ||||||| |||  || |||||||| ||||    
T  19265792 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaaa--aagagggtaaggctgcgtacaatacaccaaat 19265889  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| || ||||| |||| |||||||||||||    
T  19265890 ggtgggaccccttcccgga-cctacatatgtgggagctttagtg 19265932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 27889388 - 27889336
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    |||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  27889388 caatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttt 27889336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 316
Target Start/End: Original strand, 47716438 - 47716576
Alignment:
Q  179 aaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa--at 276  Q
    |||||||||| | || ||||| ||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| |||  || |||||||| ||  ||    
T  47716438 aaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaataat 47716536  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||| |||||||| |||||  | ||||||||||||||    
T  47716537 ggtgggaccccttcccggaccccgcatatgcgggagcttt 47716576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 3469337 - 3469191
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataat-agggtaaagctatgtgcaatacac--aa 273  Q
    |||||||||||||| || ||||||||| ||||    |||||| ||||||||| |||||| ||||||| ||  ||||||  | |  || ||||||||  ||    
T  3469337 gtaaagttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaaaaaaaacagggtacggttgcgtacaatacaccaaa 3469238  T
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||| |||| ||||||| |||||||  |||||||||||||||||||    
T  3469237 aatggcgggaccccttcctagaccctgtgtatgcgggagctttagtg 3469191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 27629611 - 27629753
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| |  ||| ||||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| | |  ||  ||||||| ||||    
T  27629611 gtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggttgcgtaaaatacaccaaat 27629709  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| | |||| | ||||||| ||||| ||||    
T  27629710 ggtgggaccccttcccgggccctgcatatgcggtagcttcagtg 27629753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 315
Target Start/End: Original strand, 19266427 - 19266564
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||  | |||||||| ||  ||| || | |||  |||||| || ||||||| |||  || |||||||| ||||    
T  19266427 gtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaa-aacagggtaaggctgcgtacaatacaccaaat 19266525  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctt 315  Q
     |||||| |||||||| |||||| |||||||||||||||    
T  19266526 tgtgggatcccttcccggaccctgcgtatgcgggagctt 19266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 317
Target Start/End: Complemental strand, 5180315 - 5180174
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||||||| ||| | |||||| |||| ||||||| ||||| ||| ||| || |||||||  || ||| ||| ||||  |||    
T  5180315 gtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaa-aacagggtaagactgtgtacaacacaccaaaa 5180217  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    ||| | ||| ||||| ||| | ||||||||||| |||||||||    
T  5180216 atgattggacccctttccaaatcctacgtatgcaggagcttta 5180174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 6736865 - 6736908
Alignment:
Q  175 cagtaaagttgttgtcgtgcgactgaaagatcacgagttcaagt 218  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||    
T  6736865 cagtaaagttgttgtcatgcgactgaaaggtcacgggttcaagt 6736908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 296
Target Start/End: Complemental strand, 8149104 - 8148985
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||| ||||||||| || ||||| ||  |||||||||||||| ||  ||||   ||||| ||| ||| |||||||||| | |  || |||||||| ||||    
T  8149104 gtaatgttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaaggttgcgtacaatacaccaaat 8149005  T
Q  277 ggtgggagcccttcccagac 296  Q
    ||||||| ||||||||||||    
T  8149004 ggtgggaccccttcccagac 8148985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 312
Target Start/End: Complemental strand, 14099164 - 14099030
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||| | ||| |||| || |||| || || || ||||||| || ||| |||  ||  || |||||||| ||||    
T  14099164 gtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaa-aacaggttaagactgcgtacaatacaccaaat 14099066  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggag 312  Q
    ||||||| ||||||||  ||||||||||||| ||||    
T  14099065 ggtgggaccccttcccgaaccctacgtatgcaggag 14099030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 312
Target Start/End: Complemental strand, 14409181 - 14409047
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||| | ||| |||| || |||| || || || ||||||| || ||| |||  ||  || |||||||| ||||    
T  14409181 gtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaa-aacaggttaagactgcgtacaatacaccaaat 14409083  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggag 312  Q
    ||||||| ||||||||  ||||||||||||| ||||    
T  14409082 ggtgggaccccttcccgaaccctacgtatgcaggag 14409047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 22699128 - 22698983
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||||||| | | | |||||||| || |||| |||||||| ||||||| || |||||||  ||  || ||||||||  |||    
T  22699128 gtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaa-aacagggtaagactgcgtacaatacaccaaaa 22699030  T
Q  275 atggtgggagcc-cttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| ||  ||||| ||||||  ||||||||||||| |||||    
T  22699029 atggtgggacccttttcccggaccctgtgtatgcgggagctatagtg 22698983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 317
Target Start/End: Original strand, 38604550 - 38604642
Alignment:
Q  223 gaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    ||||||| ||||| |||||||  | ||||||| |||  || |||||||| |||||||| || ||||| || |||||| |||||||||||||||||    
T  38604550 gaaacagcctcttgtgtaaaa--acagggtaaggctgcgtacaatacaccaaatggtgagacccctttccggaccctgcgtatgcgggagcttta 38604642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 316
Target Start/End: Original strand, 39123867 - 39124010
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataa---tagggtaaagctatgtgcaatacac-- 271  Q
    |||||||||||||| || ||||||||   |||| |||||||| |||||||| ||||||| |||||||  |   ||||| || |||  ||  |||||||      
T  39123867 gtaaagttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacacca 39123965  T
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    |||||||||||| |||||||| |||||| |||||| |||||||||    
T  39123966 aaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 39124010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 44123779 - 44123713
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaa 243  Q
    ||||||||| |||| || ||||||||||| ||| |||||||| || ||||||| ||||| |||||||    
T  44123779 gtaaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaacagcctcttgtgtaaaa 44123713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 314
Target Start/End: Complemental strand, 2663057 - 2662958
Alignment:
Q  211 gttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcggg 310  Q
    |||||||| || ||||||| ||||| |||||||||   |||||| |||  || |||||||| ||||||||||| |||||  |||||||| | ||||||||    
T  2663057 gttcaagtcctggaaacagcctcttgtgtaaaata---gggtaaggctgcgtacaatacaccaaatggtggga-cccttttcagaccctgcatatgcggg 2662962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 7193062 - 7193127
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaa 242  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||  ||||| ||||||    
T  7193062 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaa 7193127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 18747481 - 18747606
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccag 294  Q
    ||||||||| ||||| | ||||||  | ||||||| || || ||||||| |  ||||||| |||  ||  ||||||| || |||||||| |||||||       
T  18747481 gactgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggtaaggctgcgtataatacaccaattggtgggaccccttcctga 18747580  T
Q  295 accctacgtatgcgggagctttagtg 320  Q
    ||||| ||||||||||||||||||||    
T  18747581 accctgcgtatgcgggagctttagtg 18747606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 33500586 - 33500634
Alignment:
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||||| |||||||| |||||| ||||||||||| ||| ||||    
T  33500586 aaaatggtgggaccccttcccggaccctgcgtatgcgggatcttcagtg 33500634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 45018983 - 45018939
Alignment:
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||| | |||||||| |||||| ||||||||||||||||||||    
T  45018983 tggtggaaccccttcccggaccctgcgtatgcgggagctttagtg 45018939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 298
Target Start/End: Original strand, 46354171 - 46354293
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || || || ||| ||||| |||||||| || ||||||  ||||| ||||||| || ||||||| |||  || ||||||||  | |    
T  46354171 gtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaata 46354269  T
Q  275 atggtgggagcccttcccagaccc 298  Q
    ||||||||| |||||||| |||||    
T  46354270 atggtgggaccccttcccggaccc 46354293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 289
Target Start/End: Complemental strand, 48123642 - 48123531
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||||||| || || | ||||||| ||| | |||||||| || ||||||| ||||| ||| |||||| |||||||| ||   | |||||||| ||||    
T  48123642 gtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgt-aaataacagggtaaaactgcatacaatacaccaaat 48123544  T
Q  277 ggtgggagccctt 289  Q
    ||||||| |||||    
T  48123543 ggtgggacccctt 48123531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 320
Target Start/End: Complemental strand, 29521842 - 29521701
Alignment:
Q  178 taaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatg 277  Q
    |||||||||||||||| ||||| ||| ||||| |||||||| || ||||||| ||||| | ||||| || ||||||| |||  || |||||||| |||||    
T  29521842 taaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaa-aacagggtaaggctgcgtacaatacaccaaatg 29521744  T
Q  278 gtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||| ||| ||||||||||| ||||||||||||||||||||    
T  29521743 gtgggaacccatcccagaccctgcgtatgcgggagctttagtg 29521701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 13160679 - 13160820
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| |||||||||| ||||| |||||||  | ||||||| |||  || |||||||| ||||    
T  13160679 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaa--acagggtaaggctgcgtacaatacaccaaat 13160776  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||||||||||||||| ||||    
T  13160777 ggtgggaccccttcccggaccctgcgtatgcgggagcttcagtg 13160820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 28817784 - 28817642
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| |||  || ||||||||  |||    
T  28817784 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacacccaat 28817686  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||    
T  28817685 ggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 28817642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 36720773 - 36720915
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| |||  || |||||||| ||||    
T  36720773 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaat 36720871  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||||||||| ||||||||||    
T  36720872 ggtgggaccccttcccggaccctgcgtatgcggaagctttagtg 36720915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 35261656 - 35261798
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| |||||||  || ||||||||||||| ||||||| || ||||||| | |  || |||||||| ||||    
T  35261656 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaa-aacagggtaaggttgcgtacaatacaccaaat 35261754  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||  |||||| ||||||||||||||||||||    
T  35261755 ggtgggaccccttcctggaccctgcgtatgcgggagctttagtg 35261798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 12670406 - 12670266
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| |||||   || ||||||| |||  || |||||||| ||||    
T  12670406 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa---aacagggtaaggctgcgtacaatacaccaaat 12670310  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| | |||||||||||| |||||    
T  12670309 ggtgggaccccttcccggaccctgcatatgcgggagctctagtg 12670266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 45071242 - 45071383
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || || || ||| ||||| ||||||||||| ||||||| ||||| |||||||  | ||||||| |||  || |||||||| ||||    
T  45071242 gtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaa--acagggtaaggctgcgtacaatacaccaaat 45071339  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||| | ||||||||||||||| ||||    
T  45071340 ggtgggaccccttcccggaccttgcgtatgcgggagcttcagtg 45071383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 39461154 - 39461010
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| ||||||| || || |||| |||  || ||||||||  | |    
T  39461154 gtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagagtaaggctgcgtacaatacaccaata 39461056  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||| || |||||||| |||||| ||||||||||||||||||||    
T  39461055 atggtgagaccccttcccggaccctgcgtatgcgggagctttagtg 39461010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 44781664 - 44781520
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    ||||||||||||||  | ||||||||| ||||| |||||||| || ||||||  ||||| ||||||| |  ||||||| ||| ||| ||||||||  |||    
T  44781664 gtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagac-agggtaaggctgtgtacaatacaccaaaa 44781566  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||| ||||| ||| ||||||||||| ||||||||||||||||||||    
T  44781565 atgttgggaccccgtcccagaccctgcgtatgcgggagctttagtg 44781520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 30454253 - 30454113
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| ||||||| ||   ||||| |||  || | |||||| ||||    
T  30454253 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacaa---ggtaaggctgcgtacgatacaccaaat 30454157  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| | |||||||||||| |||||    
T  30454156 ggtgggaccccttcccggaccctgcatatgcgggagctctagtg 30454113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 317
Target Start/End: Complemental strand, 8897922 - 8897783
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||| | ||| ||||| ||| |||| || ||||||  | ||| ||||||| |||||||||| |||| || |||||||| ||||    
T  8897922 gtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaa-aatagggtaaggctacgtacaatacaccaaat 8897824  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    ||||||| |||||||| |||||| | |||||||||||||||    
T  8897823 ggtgggaccccttcccggaccctgcatatgcgggagcttta 8897783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 20284231 - 20284085
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataata-gggtaaagctatgtgcaatacacaaa- 274  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| | ||||| || | |||||| |||  || |||||||| ||     
T  20284231 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtacaatacaccaat 20284132  T
Q  275 -atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
     ||||||||| |||||||| |||||| |||||||||||| |||||||    
T  20284131 aatggtgggaccccttcccggaccctgcgtatgcgggagttttagtg 20284085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 316
Target Start/End: Complemental strand, 24365218 - 24365079
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || |||| |||  ||||| |||||||  |||||||||| ||||| ||||||| |  ||||||| |||  |  |||||||| ||||    
T  24365218 gtaaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggtaaggctgcgaacaatacaccaaat 24365119  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||| |||||||| |||||| |||||| |||||||||    
T  24365118 ggtgggaccccttcccggaccctgcgtatgtgggagcttt 24365079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 2626496 - 2626641
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataata--gggtaaagctatgtgcaatacacaaa 274  Q
    |||||||||||||| || ||| ||||| ||||| |||||||| || ||||||| ||||| ||||||| || |  ||||||  ||  || |||||||| ||    
T  2626496 gtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaa 2626595  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||| ||||| ||||||||||||||| | ||||||||||||| ||||    
T  2626596 atgatgggaccccttcccagaccctgcatatgcgggagcttcagtg 2626641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 5135418 - 5135309
Alignment:
Q  206 cacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtat 305  Q
    |||| |||||||| || ||||||| ||||| ||||||| || ||||||| ||| ||| |||||||| ||||||||||| |||||||| |||||| |||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaa-aagagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcgtat 5135320  T
Q  306 gcgggagcttt 316  Q
    || ||||||||    
T  5135319 gcaggagcttt 5135309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 21070860 - 21070713
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgt--aaaataatagggtaaagctatgtgcaatacac--a 272  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| | |  |||| || ||||||| |||  || ||||||||  |    
T  21070860 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaa 21070761  T
Q  273 aaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
     |||||||||| |||||||| |||||| |||||||||||| |||||||    
T  21070760 taatggtgggaccccttcccggaccctgcgtatgcgggagttttagtg 21070713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 44742677 - 44742534
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaataca-caaaa 275  Q
    ||||||||||||||| | || || ||| ||| ||||||||||||| |||||| |||| | ||||||| || ||||||| |||  || ||||||| |||||    
T  44742677 gtaaagttgttgtcgcgtgattgtaaggtcatgagttcaagttctggaaacaatctcctgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaaa 44742579  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||   ||||||||| |||||||||| ||||||    
T  44742578 tggtgggaccccttcttggaccctacggatgcgggagcattagtg 44742534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 12625866 - 12626009
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||||||||||||| ||||   || ||||| | |||||| || ||||||  ||||| ||||||| || |||||||  ||   | |||||||| ||||    
T  12625866 gtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgcatacaatacaccaaat 12625965  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||| |||| |||||| ||||||||||||||||||||    
T  12625966 ggtgggaccccctcccggaccctgcgtatgcgggagctttagtg 12626009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 44530126 - 44530268
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||||| |||| || ||||  ||| ||||| ||||||||  | ||||||  ||||| ||||||| || ||||||| |||  || |||||||| ||||    
T  44530126 gtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaat 44530224  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||  |||||| ||||||||||||||||||||    
T  44530225 ggtgggaccccttcctggaccctgcgtatgcgggagctttagtg 44530268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 26954109 - 26954254
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || || |  ||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| |||  || ||||||||  | |    
T  26954109 gtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaata 26954208  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||||||||   | ||||||||||||||||||    
T  26954209 atggtgggaccccttcccagacctcgcatatgcgggagctttagtg 26954254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 313
Target Start/End: Complemental strand, 20869654 - 20869523
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| |||||   || ||||||| ||| ||| |||||||| ||      
T  20869654 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa---aacagggtaaggctgtgtacaatacaccaa-- 20869560  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagc 313  Q
    |||| || |||||||| |||||| | |||||||||||    
T  20869559 ggtgagaccccttcccggaccctgcatatgcgggagc 20869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 320
Target Start/End: Complemental strand, 18164914 - 18164776
Alignment:
Q  180 aagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggt 279  Q
    ||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| ||||||  || ||||||| | |  || |||||||| ||| | |    
T  18164914 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaa--aacagggtaaggttgcgtacaatacaccaaaggat 18164817  T
Q  280 gggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    | || |  ||||| |||||| ||||||||||||||||||||    
T  18164816 gtgaccatttcccggaccctgcgtatgcgggagctttagtg 18164776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 320
Target Start/End: Original strand, 29877117 - 29877213
Alignment:
Q  223 gaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| || || ||||||| || ||||||| |||  || |||||||| ||||||||||| |||||||| |||||| ||||||||||||| ||||||    
T  29877117 gaaacagccttttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcgttagtg 29877213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 317
Target Start/End: Original strand, 36918120 - 36918240
Alignment:
Q  196 actgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccaga 295  Q
    |||||||| ||||  ||||||||||| |||||| | |||| ||||||| || ||||||| ||| ||| |||||||| |||| || |||  |||||||| |    
T  36918120 actgaaaggtcacatgttcaagttctggaaacaatttcttatgtaaaa-aacagggtaaggctgtgtacaatacaccaaatagtaggattccttcccaaa 36918218  T
Q  296 ccctacgtatgcgggagcttta 317  Q
    ||||| ||||||| ||||||||    
T  36918219 ccctatgtatgcgagagcttta 36918240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 28407475 - 28407519
Alignment:
Q  273 aaatggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||    
T  28407475 aaatggtgggaccccttcccggaccctacgtatgcgggagcttta 28407519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 318
Target Start/End: Complemental strand, 8484062 - 8483956
Alignment:
Q  211 gttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcggg 310  Q
    |||||||| || ||||||  ||||| ||||||| || |||| || |||  || |||||||| || |||||||| ||| ||||||||||| ||||||||||    
T  8484062 gttcaagtcctggaaacaacctcttgtgtaaaa-aacagggcaaggctgcgtacaatacaccaattggtgggaccccatcccagaccctgcgtatgcggg 8483964  T
Q  311 agctttag 318  Q
    ||||||||    
T  8483963 agctttag 8483956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 320
Target Start/End: Original strand, 19729365 - 19729459
Alignment:
Q  223 gaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||||||| ||||||| |   |||||| ||| ||| |||||||| ||||||||||| |||||||| |||||| | ||| |||||||| |||||    
T  19729365 gaaacagtctcttatgtaaaaca---gggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcatatacgggagctctagtg 19729459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 22598134 - 22598275
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||||||||||    ||||||||| ||||| |||||| | || ||||||  ||||| ||||||| || ||||||| ||||||| |||||||| || |    
T  22598134 gtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaa-aacagggtaaggctatgtacaatacaccaatt 22598232  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||| || || ||||| |||| | ||||||||||| ||||||||    
T  22598233 ggtgagaccctttcccggaccttgcgtatgcggga-ctttagtg 22598275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 6760799 - 6760943
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| |  ||||  ||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| |||  || ||||||||  | |    
T  6760799 gtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggcttcgtacaatacaccaata 6760897  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||| | |||||  | ||||||||||||||||||    
T  6760898 atggtgggaccccttctcggaccccgcatatgcgggagctttagtg 6760943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 7136687 - 7136543
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa-- 274  Q
    |||||||||||||| || ||||| ||| ||| | |||||||| || ||||||  ||||| ||||||| |  ||||||| |||  || |||||||| ||      
T  7136687 gtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaa-accagggtaaggctgcgtacaatacaccaata 7136589  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||||  | ||||||||||||||||||    
T  7136588 atggtgggaccccttcccggaccccgcatatgcgggagctttagtg 7136543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 16013527 - 16013575
Alignment:
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| || ||||||||||||||| | ||||||||||||||||||    
T  16013527 aaaatggtgcgaccccttcccagaccctgcctatgcgggagctttagtg 16013575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 26102580 - 26102636
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| |||||||| |||||| | |||||||||||| |||||    
T  26102580 caatacaccaaatggtgggaccccttcccggaccctgcttatgcgggagctctagtg 26102636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 17823553 - 17823695
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||| ||||| ||||| |||||||| || ||||||| ||||| ||||||| |  ||| |||  ||  ||  ||||||| ||||    
T  17823553 gtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-accaggataagactgcgtaaaatacaccaaat 17823651  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||| | ||||||||  ||||| | ||||| ||||||||||||    
T  17823652 ggtggaaccccttcccgaaccctgcatatgcaggagctttagtg 17823695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 320
Target Start/End: Original strand, 31457155 - 31457291
Alignment:
Q  182 gttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgg 281  Q
    ||||||||| || | ||||||| ||||| |||||||| ||  |||||  ||||| |||||||  |||||  || |||  || |||||||  ||||||| |    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaa--ataggaaaaggctgcgtacaatacatcaaatggtag 31457252  T
Q  282 gagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    || ||||||||| ||||| |||||||||||||| |||||    
T  31457253 gaccccttcccaaaccctgcgtatgcgggagctctagtg 31457291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 320
Target Start/End: Original strand, 389642 - 389764
Alignment:
Q  199 gaaagatcacgagttcaagttctagaaacagtctcttctgt-aaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagacc 297  Q
    ||||| ||||| |||||||| || ||||||  ||||| ||| |||| || ||||||| | |  || |||||||| ||||| ||||| ||||| || ||||    
T  389642 gaaaggtcacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggtaaggttgcgtacaatacaccaaatgatgggatccctttcctgacc 389741  T
Q  298 ctacgtatgcgggagctttagtg 320  Q
    || |||||||| |||||||||||    
T  389742 ctgcgtatgcgagagctttagtg 389764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 25250499 - 25250643
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||| ||| ||||  |||||||| || ||||||| || || ||||||| |||||||||  |||  || ||||||||  | |    
T  25250499 gtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaa-aatagggtatggctgcgtacaatacaccaata 25250597  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| ||||||||  ||||  | |||||||||| |||||||    
T  25250598 atggtgggaccccttcccgaaccccgcatatgcgggagatttagtg 25250643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 28407393 - 28407459
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaa 243  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || ||||||| ||||| |||||||    
T  28407393 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 28407459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 317
Target Start/End: Original strand, 24245428 - 24245565
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac---aa 273  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||| ||||||| ||     ||| |||||||  ||| || |||| |||   ||    
T  24245428 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac-gtctcttatg-----taacagggtaagactacgtacaatgcaccaaaa 24245521  T
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    ||| |||||| |||||||  |||||| |||||||||||||||||    
T  24245522 aattgtgggaccccttcctggaccctgcgtatgcgggagcttta 24245565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 30962929 - 30962857
Alignment:
Q  179 aaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggt 252  Q
    |||||||||||| || || |||||| |||||| ||||||| || ||||||| ||||| ||||||| ||||||||    
T  30962929 aaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaa-aatagggt 30962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 320
Target Start/End: Original strand, 20869946 - 20870044
Alignment:
Q  223 gaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa--atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||||||| ||||||| || ||||||| |||  || |||||||| ||  ||||||||| |||||||  |||||  | ||||||||||||||||||    
T  20869946 gaaacagtctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggagctttagtg 20870044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 27507985 - 27508029
Alignment:
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||  ||||| ||||||||||||||||||||    
T  27507985 tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtg 27508029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 40604977 - 40604922
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||| ||| | ||||||| | ||||||||||||||||||||||||||    
T  40604977 caatacactaaatgatgg-atcccttccgaaaccctacgtatgcgggagctttagtg 40604922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 172 - 320
Target Start/End: Original strand, 14617033 - 14617180
Alignment:
Q  172 aaccagtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac 271  Q
    |||| |||||||||||||| || ||||||||| |||||||||||||| || ||||||| ||||| ||| |||||| | ||||| | |  || ||||||||    
T  14617033 aaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgt-aaataacaaggtaaggttgcgtacaatacac 14617131  T
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
     ||||||||||| |||||||| |||||| | ||||||||||||||||||    
T  14617132 caaatggtgggatcccttcccggaccctgcatatgcgggagctttagtg 14617180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 316
Target Start/End: Complemental strand, 18724703 - 18724565
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| ||| ||| |||||||| ||||    
T  18724703 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgtgtacaatacaccaaat 18724605  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
      ||||| |||||||| |||||||| ||||||||||||||    
T  18724604 cttgggaccccttcccggaccctacatatgcgggagcttt 18724565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 324
Target Start/End: Complemental strand, 46248111 - 46247965
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||  ||||| ||||||||  | ||||||| ||||| ||||||| || |||||||  ||  || |||||||| ||||    
T  46248111 gtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaa-aacagggtaagactgcgtacaatacaccaaat 46248013  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtgtacc 324  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  46248012 ggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtacc 46247965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 27474281 - 27474422
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||  ||||||||  | ||||||||||||| |||||||  | |||| ||||||  || ||||||||  |||    
T  27474281 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaa--acagggcaaagctgcgtacaatacactgaat 27474378  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||    
T  27474379 ggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 27474422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 23768478 - 23768336
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||  ||||||||  | ||||||| ||||| ||||||| || ||||||| |||  || |||||||| ||||    
T  23768478 gtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaat 23768380  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  23768379 ggtgggacaccttcccagaccctgcgtatgcgggagctttagtg 23768336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 46991804 - 46991946
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || ||||||  ||||| ||||||| || ||||||| ||| ||| ||||||||  |||    
T  46991804 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa-aacagggtaaggctgtgtacaatacaccgaat 46991902  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| |||||| |||||||||||||    
T  46991903 ggtgggaccccttcccggaccctgcgtatgtgggagctttagtg 46991946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 34725254 - 34725114
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| |||||   || ||||||| |||  || |||||||| ||||    
T  34725254 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa---aacagggtaaggctgcgtacaatacactaaat 34725158  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| | |||||||||||| |||||    
T  34725157 ggtgggaccccttcccggaccctgcatatgcgggagctctagtg 34725114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 47214511 - 47214651
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||||||||| | ||||| |   |||||| | |  || |||||||| ||||    
T  47214511 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtttaaaaca---gggtaaggttgcgtacaatacaccaaat 47214607  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||||||||||| | |||||||||||| |||||    
T  47214608 ggtgggaccccttcccagaccctgcatatgcgggagctctagtg 47214651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 32632714 - 32632573
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| |  ||||||||| ||||| |||||||| || ||||||| ||||| |||||||  | ||||||| |||  || |||||||| ||||    
T  32632714 gtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--acagggtaaggctgcgtacaatacaccaaat 32632617  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||||| ||||| | ||||||||||||| ||||    
T  32632616 ggtgggaccccttcccaaaccctgcatatgcgggagcttgagtg 32632573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 6925100 - 6925242
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || |||| || ||||| ||||||| |||||||||| |||  |  ||||||||  |||    
T  6925100 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaa-aatagggtaaggctgcggacaatacaccgaat 6925198  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| | |||| ||||||||||||||||||||    
T  6925199 ggtgggaccccttcccggtccctgcgtatgcgggagctttagtg 6925242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 320
Target Start/End: Complemental strand, 35253325 - 35253203
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccag 294  Q
    ||||||||||||||| |||||||| || ||||||| ||||| ||||||| |   |||||| |||  || |||||||| ||||||||||| |||||||| |    
T  35253325 gactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 35253229  T
Q  295 accctacgtatgcgggagctttagtg 320  Q
    ||||| | |||||||||||| |||||    
T  35253228 accctgcatatgcgggagctctagtg 35253203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 316
Target Start/End: Original strand, 18944643 - 18944783
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa-- 274  Q
    |||||||||||||| || ||||||||| ||||  |||||||  || ||||||| ||||| ||||||| || ||||||| |||  || |||||||| ||      
T  18944643 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaca 18944741  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||||| |||||||| |||||| ||||||||||||||||    
T  18944742 atggtgggaccccttcccggaccctgcgtatgcgggagcttt 18944783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 27201647 - 27201791
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||||||| ||| | |||||||| || ||||||| ||||| ||| | | || ||||||| |||  || ||||||||  |||    
T  27201647 gtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcaga-aacagggtaaggctgcgtacaatacaccaaaa 27201745  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||| | ||||||||||||||||||||    
T  27201746 atggtgggaccccttcccggaccttgcgtatgcgggagctttagtg 27201791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 176 - 320
Target Start/End: Complemental strand, 38478439 - 38478298
Alignment:
Q  176 agtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaa 275  Q
    |||||| |||||||| || ||||||||| ||||| |||||||| |||||||||| ||||| ||||||| |   |||||| |||  || |||||||| |||    
T  38478439 agtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaa 38478343  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||| | |||||| | |||||| | |||||||||||| |||||    
T  38478342 tggtggaaccccttctcggaccctgcatatgcgggagctctagtg 38478298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 45402182 - 45402238
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  45402182 caatacaccaaatggtgggaccccttcccagaccctgcgtatgcgggagctttagtg 45402238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 320
Target Start/End: Complemental strand, 45812692 - 45812553
Alignment:
Q  178 taaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatg 277  Q
    ||||||||||||| || ||||||||| ||||  |||||||| ||  |||||||||||| ||||||| |   |||||| |||   | |||||||| |||||    
T  45812692 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgtaaaaga---gggtaaggctgcatacaatacaccaaatg 45812596  T
Q  278 gtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||| ||||||||| ||||| | |||||||||||| |||||    
T  45812595 gtgggaccccttcccaaaccctgcatatgcgggagctctagtg 45812553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 18742119 - 18741973
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctag-aaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aa 273  Q
    |||||||||||||| || ||||||||| ||| | |||||| |  | | ||||||||| || | ||||| || ||||||| |||  || ||||||||  ||    
T  18742119 gtaaagttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtcttttgtataaaaaaacagggtaaggctgcgtacaatacaccaaa 18742020  T
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||    
T  18742019 aatggtgggaccccttcccagaccctgcgtatgcgagagctttagtg 18741973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 35117926 - 35117781
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    ||||||||||||||  | ||||||||| ||||| |||||||| || |||| || ||||| |||||||| | ||||||| ||| ||| ||||||||  |||    
T  35117926 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaat-acagggtaaggctgtgtacaatacaccaaaa 35117828  T
Q  275 atggtgggagcccttcccagaccctacgt-atgcgggagctttagtg 320  Q
    ||| ||||| |||||||| |||||| ||| |||| ||||||||||||    
T  35117827 atgatgggaccccttcccggaccctgcgtaatgcaggagctttagtg 35117781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 312
Target Start/End: Complemental strand, 41319964 - 41319830
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||  ||| |||| || ||||||||||||| ||||||| || ||||||| |||  || |||||||| ||||    
T  41319964 gtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaat 41319866  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggag 312  Q
    | ||||| ||||||||  ||||| | ||||||||||    
T  41319865 gatgggaccccttcccgaacccttcatatgcgggag 41319830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 20004250 - 20004106
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa-- 274  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || ||||||| ||||  ||||||| || | ||||| |||  || |||||||| ||      
T  20004250 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaa-aacaaggtaaggctgcgtacaatacaccaata 20004152  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| ||||||||||||||  | ||||||||||||||||||    
T  20004151 atggtgggaccccttcccagaccccgcatatgcgggagctttagtg 20004106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 30395886 - 30395742
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa-- 274  Q
    |||||||||||||| || ||||  ||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| |||  || |||||||| ||      
T  30395886 gtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaata 30395788  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||||  | ||||||||||||||||||    
T  30395787 atggtgggaccccttcccggaccccgcatatgcgggagctttagtg 30395742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 19414439 - 19414579
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| |  ||||||||| ||||| |||||||| ||||||| || ||||| |||||   || ||| ||| |||  || |||||||| ||||    
T  19414439 gtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgtaa---aacaggttaaggctgcgtacaatacaccaaat 19414535  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||||  ||||| | |||||||||||| |||||    
T  19414536 ggtgggaccccttcccgtaccctgcatatgcgggagctctagtg 19414579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 2435945 - 2435802
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aaaa 275  Q
    ||||||||||||||  | ||||||||| ||||| |||||||| || ||||||| ||| | ||| ||| ||||||||||  ||  || |||||||| ||||    
T  2435945 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaa-aatagggtaagcctgcgtacaatacaccaaaa 2435847  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||| ||  ||||| || |||||||||||||||||    
T  2435846 tggtgggacccctttccgtaccctccgcatgcgggagctttagtg 2435802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 4349724 - 4349780
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  4349724 caatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 4349780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 316
Target Start/End: Original strand, 11596513 - 11596650
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||| | |||| || ||||||||  ||||| |||||||| |||||||||  ||||| |||||||  | ||||||| |||  ||  ||||||| ||||    
T  11596513 gtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaaaa--acagggtaaggctgcgtataatacaccaaat 11596610  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||| |||||||  |||||| ||||||||||||||||    
T  11596611 ggtgggaccccttcctggaccctgcgtatgcgggagcttt 11596650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 320
Target Start/End: Complemental strand, 45264537 - 45264415
Alignment:
Q  198 tgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aaaatggtgggagcccttcccagac 296  Q
    |||||| ||||  |||||||| || ||||||  ||||| || |||| || || |||| ||| |||||||||||| |||||||||||| |||||| |||||    
T  45264537 tgaaaggtcacatgttcaagtcctggaaacaacctcttgtgcaaaa-aacagagtaaggctgtgtgcaatacaccaaaatggtgggaccccttctcagac 45264439  T
Q  297 cctacgtatgcgggagctttagtg 320  Q
    ||| | ||||||||||||||||||    
T  45264438 cctgcatatgcgggagctttagtg 45264415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 320
Target Start/End: Original strand, 19701568 - 19701713
Alignment:
Q  175 cagtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aa 273  Q
    ||||||||||||||||||| ||||||||  ||||| ||| ||||  |  |||||| ||||| ||||||| | | || ||| | |  || |||||||| ||    
T  19701568 cagtaaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaacttgg-taaggatgggtacaatacaccaa 19701666  T
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||  |||||||| |||||| ||||||||||||||||||||    
T  19701667 aatggtggggccccttcccggaccctgcgtatgcgggagctttagtg 19701713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 314
Target Start/End: Complemental strand, 25468422 - 25468285
Alignment:
Q  176 agtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaa 275  Q
    ||||||||||||||| || || |||||| ||| | |||||||| || ||||||  ||||| ||||||| |  ||||||| | |  || |||||||| |||    
T  25468422 agtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaa-atcagggtaaggttgcgtacaatacaccaaa 25468324  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagct 314  Q
    |||| ||| | ||||||||||||| ||||||||||||||    
T  25468323 tggttggacctcttcccagaccctgcgtatgcgggagct 25468285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 320
Target Start/End: Original strand, 9939463 - 9939606
Alignment:
Q  179 aaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaaat 276  Q
    |||||||||||| || ||||||||| |||||||||||||| || ||||||  ||||| | ||| | || | ||||| | |  |||||||||||  |||||    
T  9939463 aaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaaga-aacatggtaaggttgcgtgcaatacaccaaaaat 9939561  T
Q  277 ggtggga-gcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||  |||||| | |||||| ||||||||||||||||||||    
T  9939562 ggtgggacccccttctcggaccctgcgtatgcgggagctttagtg 9939606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 12126993 - 12126853
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| ||  | |||||| ||||| ||| ||||||| |||||||  |||| ||||||| |   |||||| |||  || |||||||| ||||    
T  12126993 gtaaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaat 12126897  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
     |||||| |||||||| |||||| | |||||||||||| |||||    
T  12126896 tgtgggaccccttcccggaccctgcatatgcgggagctgtagtg 12126853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 324
Target Start/End: Original strand, 8197046 - 8197189
Alignment:
Q  180 aagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggt 279  Q
    ||||||||||| || ||||||||| ||||| |||||||| || | ||  | ||||| ||||||| || | ||||| |||| || || ||||| |||||||    
T  8197046 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaa-aacatggtaaggctacgtacagtacaccaaatggt 8197144  T
Q  280 gggagcccttcccagaccctacgtatgcgggagctttagtgtacc 324  Q
     ||| |||||| | |||||| ||||||  ||||||||||||||||    
T  8197145 aggaccccttctcggaccctgcgtatgttggagctttagtgtacc 8197189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 10668243 - 10668369
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa--atggtgggagcccttccc 292  Q
    ||||||||| ||||| |||||||| || ||||||| ||||| ||||||| || | ||||| | |  || |||||||| ||  ||||||||| ||||||||    
T  10668243 gactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacaaggtaaggttgcgtacaatacaccaataatggtgggaccccttccc 10668341  T
Q  293 agaccctacgtatgcgggagctttagtg 320  Q
     | |||| ||||||||||||||||||||    
T  10668342 ggtccctgcgtatgcgggagctttagtg 10668369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 33594191 - 33594147
Alignment:
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  33594191 tggtgggaccccttcccagaccctgcgtatgcgggagctttagtg 33594147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 35005141 - 35005267
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaaatggtgggagcccttccc 292  Q
    ||||||||| ||||| ||||||||  |  |||||| ||||| ||||||| || ||||||| |||   | ||||||||  |||||||||||| ||||||||    
T  35005141 gactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaa-aacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttccc 35005239  T
Q  293 agaccctacgtatgcgggagctttagtg 320  Q
     |||||| |||||||||| |||||||||    
T  35005240 ggaccctgcgtatgcgggcgctttagtg 35005267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 312
Target Start/End: Original strand, 20036220 - 20036355
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||  ||||| ||||||   | |||||||   |  || |||||||| ||||    
T  20036220 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaagggtaagattgcgttcaatacaccaaat 20036319  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggag 312  Q
    ||||| | |||||||| |||||| ||||||| ||||    
T  20036320 ggtggaaccccttcccggaccctgcgtatgcaggag 20036355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 6358215 - 6358264
Alignment:
Q  271 caaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||||||| ||||||||||||||| ||||||| ||| ||||||||    
T  6358215 caaaatggtgggaccccttcccagaccctgcgtatgcaggatctttagtg 6358264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 43768225 - 43768278
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    |||||||| || |||||||| ||||||||||||||| ||||| |||||||||||    
T  43768225 caatacaccaattggtgggaccccttcccagaccctgcgtatacgggagcttta 43768278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 316
Target Start/End: Complemental strand, 44485269 - 44485129
Alignment:
Q  175 cagtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa 274  Q
    |||||||||||||||| || || |||||| ||||| |||  ||| || ||||||  | ||| ||||||| |  | ||||| |||  || |||||||| ||    
T  44485269 cagtaaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagac-atggtaaggctgcgtacaatacaccaa 44485171  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||| ||| |||||||| || ||||||||||||||||||||    
T  44485170 atggttggaccccttcccggatcctacgtatgcgggagcttt 44485129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 1517383 - 1517327
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| || |||||||| |||||| |||||||| ||||||| ||||||||||||    
T  1517383 caatacaccaattggtgggaccccttctcagaccctgcgtatgcaggagctttagtg 1517327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 15505650 - 15505702
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    |||||||| ||||||||||| ||||||||  ||||| ||||||||||||||||    
T  15505650 caatacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagcttt 15505702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 23796551 - 23796607
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| |||||||| || ||||||||||||||| | ||||| ||||||||||||    
T  23796551 caatacaccaaatggtgagaccccttcccagaccctgcatatgctggagctttagtg 23796607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 31382286 - 31382226
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtgtacc 324  Q
    |||||||| ||||||||||| |||||||  |||||| | ||||||||||||||| ||||||    
T  31382286 caatacaccaaatggtgggaccccttcctggaccctgcatatgcgggagctttactgtacc 31382226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 42304271 - 42304223
Alignment:
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||||| |||||||| |||||| |||||| |||||||||||||    
T  42304271 aaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtg 42304223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 50606497 - 50606545
Alignment:
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||||| |||||||| |||||| | ||||||||||||||||||    
T  50606497 aaaatggtgggaccccttcccggaccctgcatatgcgggagctttagtg 50606545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 319
Target Start/End: Complemental strand, 18335445 - 18335305
Alignment:
Q  178 taaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatg 277  Q
    ||||||| ||||| || | ||||||| |||| |||| |||| || ||||||||||||| | ||||| | |||||||||| |  || |||||||  |||||    
T  18335445 taaagtttttgtcatgtgtctgaaaggtcacaagttaaagtcctggaaacagtctcttgtttaaaa-attagggtaaagttgcgtacaatacatcaaatg 18335347  T
Q  278 gtgggagcccttcccagaccctacgtatgcgggagctttagt 319  Q
     ||||| || |||| ||||| |  |||| |||||||||||||    
T  18335346 atgggaccctttcctagaccatgtgtatacgggagctttagt 18335305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 43207589 - 43207638
Alignment:
Q  271 caaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||| |||||||| | |||||||||||||| ||||||| |||||||||||    
T  43207589 caaattggtgggacctcttcccagaccctatgtatgcgagagctttagtg 43207638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 10378807 - 10378751
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| ||||||   |||||| | ||||||||||||||||||    
T  10378807 caatacaccaaatggtgggaccccttcttggaccctgcatatgcgggagctttagtg 10378751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 17470504 - 17470363
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaataca-caaaa 275  Q
    ||||||||||||||  | ||||||| | ||| | |||||||| |||||||||| ||||| ||||||| || ||||||| |||  || ||||||| |||||    
T  17470504 gtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaaa 17470406  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    | |||||| ||| | || || ||| |||||| |||||||||||||    
T  17470405 tagtggga-cccgttcctga-cctgcgtatgtgggagctttagtg 17470363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 316
Target Start/End: Complemental strand, 31442517 - 31442409
Alignment:
Q  209 gagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aaaatggtgggagcccttcccagaccctacgtatgc 307  Q
    ||||||||||  ||||||||| || || ||||||| || ||||||| | |  || |||||||| |||||||||||| |||||||| ||| ||  |||||     
T  31442517 gagttcaagtcttagaaacagccttttatgtaaaaaaacagggtaaggatgcgtacaatacaccaaaatggtgggaccccttcccggacactgtgtatgt 31442418  T
Q  308 gggagcttt 316  Q
    |||||||||    
T  31442417 gggagcttt 31442409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 35019316 - 35019371
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| || |||||||| |||| |||||||||| |||||||| |||||||||||    
T  35019316 caatacaccaattggtgggacccct-cccagaccctgcgtatgcgagagctttagtg 35019371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 24448867 - 24449009
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || ||||||| || || ||||||| |||||||||| |||  || |||||||| ||||    
T  24448867 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaa-aatagggtaaggctgcgtacaatacaccaaat 24448965  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||||||| ||||||||||||    
T  24448966 ggtgggaccccttcccggaccctgcgtatgcaggagctttagtg 24449009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 38879558 - 38879702
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa-- 274  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| | ||||| || ||||||| |||  || |||||||| ||      
T  38879558 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaa-aacagggtaaggctgcgtacaatacaccaata 38879656  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||    
T  38879657 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 38879702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 43334179 - 43334323
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||| | ||||||| || ||||||| |||  || ||||||||  |||    
T  43334179 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgtacaatacaccaaaa 43334278  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||||| || |||||||||||||||||    
T  43334279 atggtgggaccccttcccggaccctgcg-atgcgggagctttagtg 43334323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 317
Target Start/End: Original strand, 27328729 - 27328870
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||||||| ||||  |||||||| || ||||||||||||| ||||||| || ||||||| |||  || ||||||||  | |    
T  27328729 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaata 27328827  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    ||||||||| ||||||||  ||||| |||||||||||||||||    
T  27328828 atggtgggaccccttcccgaaccctgcgtatgcgggagcttta 27328870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 41014296 - 41014437
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || ||||||| ||||| ||||||  || ||||||| |||  || |||||||| ||||    
T  41014296 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaa--aacagggtaaggctgcgtacaatacaccaaat 41014393  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||  |||||  | ||||||||||||||||||    
T  41014394 ggtgggaccccttcctggaccccgcatatgcgggagctttagtg 41014437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 35710290 - 35710430
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| ||  |||||||| ||||| |||||||| || ||||||| ||||| |||||   |||||||||| |||  || |||||||| ||||    
T  35710290 gtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa---aatagggtaaggctgcgttcaatacaccaaat 35710386  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| || | | | |||||||||||| |||||    
T  35710387 ggtgggaccccttcccggaacatgcatatgcgggagctctagtg 35710430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 32703419 - 32703541
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccag 294  Q
    ||||||||| ||||| |||||||| || ||||||| ||||| ||||||| |   |||||| |||  || |||||||| ||||||||||| |||||||| |    
T  32703419 gactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 32703515  T
Q  295 accctacgtatgcgggagctttagtg 320  Q
    ||||| | |||||||||||| |||||    
T  32703516 accctgcatatgcgggagctctagtg 32703541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 16957371 - 16957433
Alignment:
Q  258 tatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||| |||||||| ||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  16957371 tatgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 16957433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 312
Target Start/End: Complemental strand, 8170140 - 8170008
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||| ||||| ||||| |||||||| || ||||||| || || ||||||| |   |||||| |||  || |||||||| ||||    
T  8170140 gtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaat 8170044  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggag 312  Q
    ||||||| |||||||| |||||| | ||||||||||    
T  8170043 ggtgggaccccttcccggaccctgcatatgcgggag 8170008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 43574611 - 43574723
Alignment:
Q  205 tcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgta 304  Q
    ||||| |||||||| || |||||| |||||| |||| || || ||||||| |||  || ||||| || ||||||||||| |||||||| |||||| ||||    
T  43574611 tcacgtgttcaagtcctggaaacaatctcttgtgtagaa-aacagggtaaggctgcgtacaatataccaaatggtgggaccccttcccggaccctgcgta 43574709  T
Q  305 tgcgggagctttag 318  Q
    ||||||||||||||    
T  43574710 tgcgggagctttag 43574723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 320
Target Start/End: Complemental strand, 12006485 - 12006344
Alignment:
Q  180 aagttgttgtcgtgcgactgaaagatcacgag-ttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa--at 276  Q
    ||||||||||| || ||||||||| ||||| | ||||||| || ||||||  ||||| ||||||| |||||||||| |||   | |||||||| ||  ||    
T  12006485 aagttgttgtcatgtgactgaaaggtcacggggttcaagt-ctggaaacaacctcttatgtaaaa-aatagggtaaggctccatacaatacaccaataat 12006388  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||||||||||| | ||||||||||||||||||    
T  12006387 ggtgggaccccttcccagaccctgcctatgcgggagctttagtg 12006344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 39801591 - 39801635
Alignment:
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  39801591 tggtgggaccccttcccagaccctacgtatgcgggagctttagtg 39801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 313
Target Start/End: Original strand, 2838750 - 2838890
Alignment:
Q  172 aaccagtaaagttgttgtcgtgcgactg-aaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaataca 270  Q
    |||| |||||||||||||| || ||||| |||| ||||||| ||||||   ||||||||  |||| |||||||  | ||||||| |||  || |||||||    
T  2838750 aaccggtaaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaaaa--acagggtaaggctgcgtacaataca 2838847  T
Q  271 caaaatggtgggagcccttcccagaccctacgtatgcgggagc 313  Q
    | ||||||||||| |||||| | |||||| |||||||||||||    
T  2838848 ccaaatggtgggatcccttctcggaccctgcgtatgcgggagc 2838890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 316
Target Start/End: Original strand, 22600431 - 22600569
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||||||| || || ||||| ||| | ||| |||||||| || |||||| | | || ||||||| |  ||||||| ||| ||| |||||||| ||||    
T  22600431 gtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacac-agggtaaggctgtgtacaatacaccaaat 22600529  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||| |||||||| || ||| ||||||||||||||||    
T  22600530 ggtgggatcccttcccggatcctgcgtatgcgggagcttt 22600569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 4619264 - 4619120
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || |||| || ||||| ||||||| || ||||||| |||  || ||||||||  | |    
T  4619264 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaata 4619166  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||||  | |||||| |||||||||||    
T  4619165 atggtgggaccccttcccggaccccgcatatgcgagagctttagtg 4619120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 10306539 - 10306493
Alignment:
Q  271 caaaatggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||    
T  10306539 caaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 10306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 25622533 - 25622579
Alignment:
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||    
T  25622533 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 25622579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 37024712 - 37024646
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaa 243  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| |||||||    
T  37024712 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 37024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 22861823 - 22861758
Alignment:
Q  178 taaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaa 243  Q
    ||||||||||||| || ||||||||| |||||  ||||||| |||||| ||||||||| |||||||    
T  22861823 taaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgtaaaa 22861758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 7097832 - 7097776
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| |||||||| || ||||||||  ||||| ||||||||||||||||||||    
T  7097832 caatacaccaaatggtgagaccccttcccgaaccctgcgtatgcgggagctttagtg 7097776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 28516592 - 28516449
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaataca-caaaa 275  Q
    ||||||||||||||  | | ||||||| ||||| ||||||||  | ||||||  ||||| ||||||| || ||| ||  |||  || ||||||| |||||    
T  28516592 gtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaa-aacaggctagggctgcgtacaatacatcaaaa 28516494  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| || |||||||||||| || |||| ||||||||||||    
T  28516493 tggtgggacccattcccagaccctgcgcatgcaggagctttagtg 28516449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 30006372 - 30006444
Alignment:
Q  248 agggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||| ||| || ||||| ||||||||||| |||||||| |  |||| |||||||||||||||||||    
T  30006372 agggtaaggctgtgtacattacactaaatggtgggaccccttcccggggcctatgtatgcgggagctttagtg 30006444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 16880757 - 16880663
Alignment:
Q  225 aacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||| ||||| ||||||| || ||||||| |||  || |||||||| |||||||| || | |||||| |||| | ||||||||||||||||||||    
T  16880757 aacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaatggtgtgaccacttcccggaccatgcgtatgcgggagctttagtg 16880663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 320
Target Start/End: Complemental strand, 5873433 - 5873338
Alignment:
Q  223 gaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||| |||||||  ||||||||| |||| || || ||||| || ||||||||  ||| ||| ||| || ||||||||||||||||||||    
T  5873433 gaaacagcctcttgtgtaaaa--atagggtaaggctaagtacactacaccaattggtgggactcctccccggacactgcgtatgcgggagctttagtg 5873338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 320
Target Start/End: Complemental strand, 19143066 - 19142959
Alignment:
Q  211 gttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcggg 310  Q
    |||||||| || ||||||  ||||| |||||||  | ||||||| |||  || || ||||| ||||||||||| |||||||| |||| | ||||||||||    
T  19143066 gttcaagtcctggaaacaacctcttgtgtaaaa--acagggtaaggctgcgtacagtacaccaaatggtgggaccccttcccggaccatgcgtatgcggg 19142969  T
Q  311 agctttagtg 320  Q
    || |||||||    
T  19142968 agatttagtg 19142959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 209085 - 208943
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaataca-caaaa 275  Q
    |||||||||||||| || |||| |||| |||| ||||||||| || | ||||  ||||| ||||||  || ||||||| |||   | ||||||| |||||    
T  209085 gtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgtaaa--aacagggtaaggctgcattcaatacaccaaaa 208988  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| |||||||  ||||||  ||||||  |||||||||||    
T  208987 tggtgggaccccttcctggaccctgggtatgcaagagctttagtg 208943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 13774928 - 13774984
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||  ||| ||||| || |||||| ||||||||||||||||||||    
T  13774928 caatacaccaaatggcaggatccctttccggaccctgcgtatgcgggagctttagtg 13774984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 21784396 - 21784348
Alignment:
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||||| ||||| || |||||| |||||||||||| |||||||    
T  21784396 aaaatggtgggacccctttccggaccctgcgtatgcgggaggtttagtg 21784348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 34154886 - 34154830
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| |||||||| |||||| | ||||||| |||| |||||    
T  34154886 caatacaccaaatggtgggaccccttcccggaccctgcatatgcggtagctctagtg 34154830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 223 - 320
Target Start/End: Original strand, 25629072 - 25629168
Alignment:
Q  223 gaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||||||| ||||||| |||||||||| ||| ||| |||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  25629072 gaaacagtctcttgtgtaaaa-aatagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctacatatgcgggagctttagtg 25629168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 5648236 - 5648377
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || ||||||| ||||| |||||||  | ||||||| |||  || |||||||| ||||    
T  5648236 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--acagggtaaggctgcgtacaatacaccaaat 5648333  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||||||||||||||| ||||    
T  5648334 ggtgggaccccttcccggaccctgcgtatgcgggagcttcagtg 5648377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 318
Target Start/End: Complemental strand, 6430783 - 6430644
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| ||||||||  | ||||||| ||||| |||||||  | ||||||| |||  || |||||||| ||||    
T  6430783 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaa--acagggtaaggctgcgtacaatacaccaaat 6430686  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttag 318  Q
    ||||||| | |||||| |||||| ||||||||||||||||||    
T  6430685 ggtgggaccacttcccggaccctgcgtatgcgggagctttag 6430644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 30639357 - 30639498
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||  |||||||| || ||||||| ||||| |||||||  | ||||||| |||  || |||||||| ||||    
T  30639357 gtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaa--acagggtaaggctgcgtacaatacaccaaat 30639454  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||| || |||||||| |||||| | ||||||||||||||||||    
T  30639455 ggtgagaccccttcccggaccctgcatatgcgggagctttagtg 30639498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 40915806 - 40915947
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||  ||| ||||| |||||||| || ||||||| ||||| |||||||  | | ||||| |||  || |||||||| ||||    
T  40915806 gtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--acaaggtaaggctgcgtacaatacaccaaat 40915903  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||    
T  40915904 ggtgggagcccttcccggaccctgcgtatgcgggagcttcagtg 40915947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 17043549 - 17043413
Alignment:
Q  180 aagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggt 279  Q
    |||||||||||  | ||||||||| ||||  |||||||| || ||||||| ||||| |||||||||  ||||||| |||  || |||||||| |||||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatac-agggtaaggctgcgtacaatacaccaaatggt 17043451  T
Q  280 gggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    |||| ||||||||||||||| | ||||| |||||||||    
T  17043450 gggaccccttcccagaccctgcatatgctggagcttta 17043413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 324
Target Start/End: Original strand, 14983811 - 14983957
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| |  || || ||| |||||  |||||||  | ||||||| ||||| ||||||| |||||||||| | |   | |||||||| ||||    
T  14983811 gtaaagttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttgtgtaaaa-aatagggtaaggttgcctacaatacactaaat 14983909  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtgtacc 324  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  14983910 ggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtacc 14983957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 7385628 - 7385499
Alignment:
Q  183 ttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtggg 282  Q
    |||||||| || ||||||||| ||||| |||||||  || ||||||| ||| | ||||||| |||||||||| | | |||||||||||| ||||||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaa-aatagggtaaggttgtgtgcaatacaccaaatggtggg 7385530  T
Q  283 agcccttcccagaccctacgtatgcgggagc 313  Q
    | || ||||| ||||||  ||||||||||||    
T  7385529 accctttcccggaccctgtgtatgcgggagc 7385499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 324
Target Start/End: Original strand, 16911539 - 16911687
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || |||| |||| ||||| |||||||| |||||||||| ||||| |||| || |  ||||||| |||  || ||||||||  | |    
T  16911539 gtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaa-atcagggtaaggctgcgtacaatacaccaata 16911637  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtgtacc 324  Q
    ||||||||| |||||||| |||||| |||| |||||||||||||| ||||    
T  16911638 atggtgggaccccttcccggaccctgcgtacgcgggagctttagtttacc 16911687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 21646941 - 21647085
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa-- 274  Q
    |||||||||||||| || ||||| ||| ||||  |||||||| || ||||||| ||||| ||||||| |||||||||| |||  || ||||| || ||      
T  21646941 gtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa-aatagggtaaggctgcgtacaatataccaata 21647039  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| ||||||||||||||  | ||||||||||||||||||    
T  21647040 atggtgggaccccttcccagaccccgcatatgcgggagctttagtg 21647085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 44363290 - 44363146
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||||||| |||||||||||||| ||  |||||| ||| | ||||||| || ||||||  |||  || |||  |||  |||    
T  44363290 gtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaa-aacagggtagggctgcgtacaacgcaccaaaa 44363192  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||    
T  44363191 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 44363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 54730226 - 54730371
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || |||  |||| ||||| |||||||| |||||||||| ||||| ||||||| |||||| ||| |||  ||  |||||||  | |    
T  54730226 gtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaataggataaggctgcgtataatacaccaata 54730325  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||| ||| | |||||||| |||||| ||||||||||||||||||||    
T  54730326 atgatggaaccccttcccggaccctgcgtatgcgggagctttagtg 54730371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 20224961 - 20225101
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||| | |||||||| || ||||||  ||||| ||||||| |   |||||| |||  || |||||||| ||||    
T  20224961 gtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaat 20225057  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| | |||||||||||| |||||    
T  20225058 ggtgggaccccttcccggaccctgcatatgcgggagctctagtg 20225101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 48598981 - 48598841
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| |||||   || ||||||| |||  || |||||||| ||||    
T  48598981 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa---aacagggtaaggctgcgtacaatacaccaaat 48598885  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||| | | ||||| |||||| |||||    
T  48598884 ggtgggaccccttcccggaccatgcatatgccggagctctagtg 48598841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 35567147 - 35567289
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| ||  |||||||| ||| | ||||||||  | ||||||| | ||| ||||||| || ||||||| ||| ||| ||| |||| ||||    
T  35567147 gtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaa-aacagggtaaggctgtgtacaacacaccaaat 35567245  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||||  ||||| ||| ||||||||||||||||    
T  35567246 ggtgggaccccttcccgaaccctgcgtctgcgggagctttagtg 35567289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 316
Target Start/End: Complemental strand, 47441688 - 47441550
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||||||||||  | ||||||||| ||||  |||||||| | |||||||||||||| ||||||| |  ||||||| ||| ||| |||||||| ||||    
T  47441688 gtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaa-atcagggtaaggctgtgtacaatacaccaaat 47441590  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||| ||| |||||||| ||||||  ||| || ||||||||    
T  47441589 ggttggaccccttcccggaccctgagtaagcaggagcttt 47441550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 320
Target Start/End: Complemental strand, 20639771 - 20639674
Alignment:
Q  223 gaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||| ||||||| || ||||||| |||  || |||||||| |||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  20639771 gaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 20639674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 320
Target Start/End: Complemental strand, 41018933 - 41018810
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccag 294  Q
    ||||||||| ||||| |||||||| || ||||||  ||||| ||||||||  |||||||| |||| || |||||||| |||| |||||| ||||||||||    
T  41018933 gactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaat--tagggtaaggctacgtacaatacaccaaatagtgggaccccttcccag 41018836  T
Q  295 accctacgtatgcgggagctttagtg 320  Q
    ||| | ||||||  || |||||||||    
T  41018835 accttgcgtatggaggggctttagtg 41018810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 11054304 - 11054164
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| ||  |||||||||||| |||||   || |||||||  ||  || |||||||| ||||    
T  11054304 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgtaa---aacagggtaagactgcgtacaatacaccaaat 11054208  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    || || | |||||||| |||||| | |||||||||||| |||||    
T  11054207 ggcggaaccccttcccggaccctgcatatgcgggagctctagtg 11054164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 47528686 - 47528546
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||  |||||||| || ||||||| ||||| |||||   || ||||||| |||  || |||||||| ||||    
T  47528686 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaa---aacagggtaaggctgcgtacaatacaccaaat 47528590  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| ||||||   |||| ||||||| |||||    
T  47528589 ggtgggaccccttcccggaccctgaatatgtgggagctctagtg 47528546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 19027829 - 19027967
Alignment:
Q  181 agttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtg 280  Q
    ||||||||||  | ||||||||| ||||| |||||||| || ||||||   |||| ||||||| || ||||||| |||  || |||||||| || |||||    
T  19027829 agttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaattggtg 19027927  T
Q  281 ggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||| ||||| |||||| || |||||| |||||||||||||    
T  19027928 ggacccctttccagactctgcgtatgtgggagctttagtg 19027967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 16408761 - 16408617
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || ||||||| ||||| ||||||| || |||||||  ||  || ||||||||  | |    
T  16408761 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaagactgcgtacaatacaccaata 16408663  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| | |||||||| |||||  | ||||||||||||||||||    
T  16408662 atggtggaaccccttcccggaccccgcatatgcgggagctttagtg 16408617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 318
Target Start/End: Complemental strand, 39029219 - 39029078
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aaaa 275  Q
    ||||||||||||||||| |||| |||| |||   |||||||   | ||||||| ||||| ||||||| || ||||||| ||| ||| |||||||| ||||    
T  39029219 gtaaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaa-aacagggtaaggctgtgtacaatacacgaaaa 39029121  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttag 318  Q
    |||||||| | ||| || |||||| | ||||||||||||||||    
T  39029120 tggtgggaccactttccggaccctgcatatgcgggagctttag 39029078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 320
Target Start/End: Original strand, 47443951 - 47444076
Alignment:
Q  194 cgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttccca 293  Q
    |||| ||||| ||||| |||||||| || ||||||| |||||  |||||| || ||||||| |||  || |||||||| ||||||||||| ||||||||     
T  47443951 cgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaa-aacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 47444049  T
Q  294 gaccctacgtatgcgggagctttagtg 320  Q
    |||||| | ||||| ||||||| ||||    
T  47444050 gaccctgcatatgcaggagcttcagtg 47444076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 320
Target Start/End: Complemental strand, 29208041 - 29207914
Alignment:
Q  190 cgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagccctt 289  Q
    |||| ||||||||| ||||| |||||||| || ||||  | ||||| ||||||| |   |||||| |||  || |||||||| ||||||||||| |||||    
T  29208041 cgtgtgactgaaaggtcacgggttcaagtcctggaaattgcctcttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaatggtgggacccctt 29207945  T
Q  290 cccagaccctacgtatgcgggagctttagtg 320  Q
    ||| |||||| | |||||||||||| |||||    
T  29207944 cccggaccctgcatatgcgggagctctagtg 29207914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 30690248 - 30690192
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| || |||||||| |||||||| |||||| ||||||||||||||||||||    
T  30690248 caatacaccaattggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 30690192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 318
Target Start/End: Original strand, 44718641 - 44718684
Alignment:
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttag 318  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  44718641 atggtgggaccccttcccagaccctgcgtatgcgggagctttag 44718684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 318
Target Start/End: Complemental strand, 49938746 - 49938611
Alignment:
Q  179 aaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aaaatg 277  Q
    ||||||||||||  | ||||||||| ||||  |||||||| || ||||||| ||||| |||||||  |  |||||| |   ||| |||||||| ||||||    
T  49938746 aaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa--acggggtaagg---tgtacaatacaccaaaatg 49938652  T
Q  278 gtgggagcccttcccagaccctacgtatgcgggagctttag 318  Q
    |||||| ||||||||| ||||| | ||||||||||||||||    
T  49938651 gtgggaccccttcccataccctgcatatgcgggagctttag 49938611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 316
Target Start/End: Original strand, 54966998 - 54967135
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||  ||||||||||| |||| |  ||||| ||||||| || ||||||| | |   | ||||| || ||||    
T  54966998 gtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaa-aacagggtaaggttgc-tacaatataccaaat 54967095  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||| ||||||||  ||||||| ||||||||||||||    
T  54967096 ggtgggaccccttcccgtaccctacatatgcgggagcttt 54967135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 14590814 - 14590920
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| |||||  ||||||| |||||||||| ||||| | ||||| || ||||||| |||   | |||||||  ||||    
T  14590814 gtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaatacatcaaat 14590913  T
Q  277 ggtggga 283  Q
    |||||||    
T  14590914 ggtggga 14590920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 33836549 - 33836503
Alignment:
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||    
T  33836549 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 33836503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 38755970 - 38755924
Alignment:
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||    
T  38755970 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 38755924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 20908701 - 20908652
Alignment:
Q  271 caaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  20908701 caaaatggtgggaccccttcccgaaccctgcgtatgcgggagctttagtg 20908652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 23580365 - 23580300
Alignment:
Q  178 taaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaa 243  Q
    |||||||||||||  | ||||||||| ||||| |||||||||||||||| || ||||| |||||||    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaa 23580300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 51865110 - 51865057
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    |||||||| ||||||||||  |||||||| |||||| |||||||||||||||||    
T  51865110 caatacaccaaatggtggggccccttcccggaccctgcgtatgcgggagcttta 51865057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 16494290 - 16494342
Alignment:
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtgtacc 324  Q
    |||||||||||| || ||||||||||||  |||||||| ||||||||||||||    
T  16494290 aaaatggtgggaccctttcccagaccctgtgtatgcggaagctttagtgtacc 16494342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 25343164 - 25343306
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    ||||||||||||||  | |||||| || ||||  ||||||||||| |||| |||||||| ||||||| || ||||||| |||  || ||||||||  |||    
T  25343164 gtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaaa 25343262  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttag 318  Q
    | ||| ||| ||||||| ||| ||| |||||| | |||||||||    
T  25343263 agggttggaccccttcctagatcctgcgtatgtgagagctttag 25343306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 30352644 - 30352596
Alignment:
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||||| |||||| | |||||| ||||||||||||||||||||    
T  30352644 aaaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtg 30352596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 47482914 - 47482870
Alignment:
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||    
T  47482914 aaaatggtgggaccccttcccggaccctgcgtatgcgggagcttt 47482870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 320
Target Start/End: Original strand, 54175043 - 54175184
Alignment:
Q  180 aagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaa-cagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aaaatg 277  Q
    ||||||||||| || ||||||||  |||||  ||||||| || |||| ||| ||||| |||||||  | ||||||| |||  || |||||||| ||||||    
T  54175043 aagttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaaaa--acagggtaaggctgcgtacaatacaccaaaatg 54175140  T
Q  278 gtgggagcccttcccag-accctacgtatgcgggagctttagtg 320  Q
    |||||| |||||||| | ||||| | ||||||||||||||||||    
T  54175141 gtgggaccccttccccggaccctgcatatgcgggagctttagtg 54175184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 320
Target Start/End: Complemental strand, 7909392 - 7909296
Alignment:
Q  223 gaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgc-gggagctttagtg 320  Q
    ||||||||||||| |||||||  | ||||||| | |  || |||||||| ||||||||||| ||||||||  ||||| ||||||| |||||||||||||    
T  7909392 gaaacagtctcttgtgtaaaa--acagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcggggagctttagtg 7909296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 320
Target Start/End: Complemental strand, 9832451 - 9832329
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccag 294  Q
    ||||||||| ||||| |||||||| ||  |||||| ||||| ||||||| |   |||||| |||  || |||||||| ||||||||||| |||||||| |    
T  9832451 gactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 9832355  T
Q  295 accctacgtatgcgggagctttagtg 320  Q
    ||||| | ||||| ||| || |||||    
T  9832354 accctgcatatgcaggaactctagtg 9832329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 11394924 - 11394971
Alignment:
Q  273 aaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||||| ||||| || |||||| ||||||||||||||||||||    
T  11394924 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtg 11394971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 11404651 - 11404698
Alignment:
Q  273 aaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||||| ||||| || |||||| ||||||||||||||||||||    
T  11404651 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtg 11404698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 23501770 - 23501908
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa-- 274  Q
    |||||||||||||| || ||||||||| ||||| ||||||||       |||| ||||| ||||||| || ||||||| | |  || |||||||| ||      
T  23501770 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc------acagcctcttgtgtaaaa-aacagggtaaggttgcgtacaatacaccaata 23501862  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||||| | ||||||||||||||||||    
T  23501863 atggtgggaccccttcccggaccctgcatatgcgggagctttagtg 23501908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 32478862 - 32478811
Alignment:
Q  265 aatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||| ||||||||||| |||||||| |||||  ||||||||||||||||    
T  32478862 aatacaccaaatggtgggaccccttcccggacccagcgtatgcgggagcttt 32478811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 38786673 - 38786728
Alignment:
Q  265 aatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||||||| |||||||| |||||| | |||||||||||| |||||    
T  38786673 aatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtg 38786728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 49796860 - 49796911
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctt 315  Q
    |||||||| ||||||||||| ||||||||  ||||| |||||||||||||||    
T  49796860 caatacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 8820581 - 8820627
Alignment:
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||| ||||||||||||||| |||||||| ||| |||||||    
T  8820581 aatggtgggaccccttcccagaccctgcgtatgcgagagttttagtg 8820627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 25463108 - 25463237
Alignment:
Q  186 ttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagc 285  Q
    ||||| || ||||||||| ||||| |||||||| || ||||||  ||||| ||||||| | | ||| || | |  || ||| |||| ||||||||||| |    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaact-gggaaaggttgcgtacaacacaccaaatggtgggacc 25463206  T
Q  286 ccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||| |||||| | ||||||||||||||    
T  25463207 ccttcccggaccctgcatatgcgggagcttt 25463237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 320
Target Start/End: Complemental strand, 30581571 - 30581481
Alignment:
Q  231 ctcttctgtaaaataatagggtaaagctatgtgcaatacac-aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||| ||||||| || ||||||| | | ||| |||||||| |||||||||||| |||||||| |||||| | ||||  ||||||||||||    
T  30581571 ctcttgtgtaaaaaaacagggtaagggtgtgtacaatacaccaaaatggtgggaccccttcccggaccctgcatatgtaggagctttagtg 30581481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 316
Target Start/End: Original strand, 21489158 - 21489203
Alignment:
Q  271 caaaatggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||||||||| ||||||||  ||||| ||||||||||||||||    
T  21489158 caaaatggtgggaccccttcccgaaccctgcgtatgcgggagcttt 21489203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 32484307 - 32484352
Alignment:
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||||| | ||||||||||||||||||    
T  32484307 atggtgggaccccttcccggaccctgcatatgcgggagctttagtg 32484352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 40553998 - 40553953
Alignment:
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||| || |||||||| |||||| ||||||||||||||||||||    
T  40553998 atggtgtgaccccttcccggaccctgcgtatgcgggagctttagtg 40553953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 46808 - 46950
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||  ||| ||||| |||||||| || ||||||  ||||| ||||||| |||||||||| | |  || |||||||| ||||    
T  46808 gtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaa-aatagggtaaggttgcgtacaatacaccaaat 46906  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||    
T  46907 ggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 46950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 24925 - 24788
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||| | ||||||||      ||||| ||||| ||||||| || ||||||| |||  || ||| |||| ||||    
T  24925 gtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaacacaccaaat 24832  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||||||  ||||| ||||||||||||||||||||    
T  24831 ggtgggaccccttcccgaaccctgcgtatgcgggagctttagtg 24788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 46772 - 46726
Alignment:
Q  271 caaaatggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  46772 caaaatggtgggaccccttcccagaccctgcgtatgcgggagcttta 46726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 40272970 - 40272828
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||| | |||||||| || ||||||  ||||| ||||||| || ||||||| |||  || |||||||| ||||    
T  40272970 gtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaat 40272872  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||    
T  40272871 ggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 40272828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 320
Target Start/End: Complemental strand, 13628948 - 13628806
Alignment:
Q  179 aaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa--at 276  Q
    |||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| ||||| | || ||||||| |||  || |||||||| ||  ||    
T  13628948 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaga-aacagggtaaggctgcgtacaatacaccaataat 13628850  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||    
T  13628849 ggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 13628806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 317
Target Start/End: Complemental strand, 46421195 - 46421054
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa-- 274  Q
    |||||||||||||| || |||| |||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| |||  || |||||||| ||      
T  46421195 gtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaata 46421097  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    ||||||||| |||||||| |||||| |||||||||||||||||    
T  46421096 atggtgggaccccttcccggaccctgcgtatgcgggagcttta 46421054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 13730762 - 13730618
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||| ||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| ||| ||| ||||||||  | |    
T  13730762 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgtgtacaatacaccaata 13730664  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||||  | ||||||||||||||||||    
T  13730663 atggtgggaccccttcccggaccccgcatatgcgggagctttagtg 13730618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 320
Target Start/End: Complemental strand, 34420804 - 34420659
Alignment:
Q  175 cagtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaataca-caa 273  Q
    ||||||||||||||||  | ||||||||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| |||  || | ||||| |||    
T  34420804 cagtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtaccatacaccaa 34420706  T
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||| |||||||| |||| | |||||| |||||||||||||    
T  34420705 aatggtgggaccccttcccggaccttgcgtatgtgggagctttagtg 34420659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 317
Target Start/End: Complemental strand, 8247847 - 8247706
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| | |  || ||||||||  | |    
T  8247847 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggttgcgtacaatacaccaata 8247749  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    |||||||||  ||||||| |||||| |||||||||||||||||    
T  8247748 atggtgggactccttcccggaccctgcgtatgcgggagcttta 8247706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 26573126 - 26573268
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||||||||||  | ||||||||| ||||| |||||||| || ||||||| ||| | ||||||| || ||||||| |||  || |||||||| || |    
T  26573126 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaa-aacagggtaaggctgcgtacaatacaccaatt 26573224  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||| |||| |||||| |||||||| |||||||||||    
T  26573225 ggtgggaccccatcccggaccctgcgtatgcgtgagctttagtg 26573268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 315
Target Start/End: Complemental strand, 12914193 - 12914056
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||  || ||| ||||| |||| ||||||||| || ||||||| ||||| ||||||| || ||||||| ||   || |||||||| ||||    
T  12914193 gtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggcggcgtacaatacaccaaat 12914095  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctt 315  Q
    |||| || ||||||||||||||| | |||||||||||||    
T  12914094 ggtgagaccccttcccagaccctgcatatgcgggagctt 12914056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 29366880 - 29366736
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa-- 274  Q
    |||||||||||||| || |||| |||| ||||| |||||||| || ||||||| ||||| | ||||| || ||||||| |||  || |||||||| ||      
T  29366880 gtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaa-aacagggtaaggctgcgtacaatacaccaata 29366782  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||| |||||| |||||| |||||||||||||    
T  29366781 atggtgggaccccttcccggaccctgcgtatgtgggagctttagtg 29366736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 22123073 - 22122933
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||| |||||||| || ||||||||| || || |||||||| || ||||||||||||| |||||   || ||||||| |||  || |||||||| ||||    
T  22123073 gtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgtaa---aacagggtaaggctgcgtacaatacaccaaat 22122977  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| | |||||| ||||| |||||    
T  22122976 ggtgggaccccttcccggaccctgcatatgcgagagctctagtg 22122933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 39203515 - 39203655
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||  |||||||| || ||||||| ||||| ||||||| |   |||||| | |  || |||||||| ||||    
T  39203515 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaaca---gggtaaggttgcgtacaatacaccaaat 39203611  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||| | | ||||||||||||||||||    
T  39203612 ggtgggaccccttcccggaccttgcatatgcgggagctttagtg 39203655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 320
Target Start/End: Original strand, 54484735 - 54484832
Alignment:
Q  223 gaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| ||||| ||||||| || | ||||| |||  || |||||||| ||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  54484735 gaaacagcctcttgtgtaaaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 54484832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 22609765 - 22609906
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| | ||| ||||||||  | ||||||| ||||| |||||||  | ||||||| |||  || |||||||| ||||    
T  22609765 gtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaa--acagggtaaggctgcgtacaatacaccaaat 22609862  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||| | ||||||||||||||| ||||    
T  22609863 ggtgggaccccttcccggaccttgcgtatgcgggagcttcagtg 22609906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 316
Target Start/End: Original strand, 26869706 - 26869843
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||  |||||||| || ||||||| ||||  |||||||  | ||||||| |||  || |||||||| ||||    
T  26869706 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaa--acagggtaaggctgcgtacaatacaccaaat 26869803  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||| ||||| || |||| | ||||||||||||||||    
T  26869804 ggtgggaccccttgccggaccatgcgtatgcgggagcttt 26869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 45620987 - 45620879
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    ||||||||||||||  | ||||||||| ||||| ||||||||||| ||||||| ||||| ||||||| || ||||||| |||  || |||||||| || |    
T  45620987 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaatt 45620888  T
Q  277 ggtgggagc 285  Q
    |||||||||    
T  45620887 ggtgggagc 45620879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 1217089 - 1217229
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||| ||| ||  |||||||| ||||| |||||||| || ||||||| ||||| ||||||| |   |||||| |||  || |||||||| ||||    
T  1217089 gtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaat 1217185  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    || |||| |||||||| |||||| | |||||||||||| |||||    
T  1217186 ggcgggaccccttcccggaccctgcatatgcgggagctctagtg 1217229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 6411979 - 6411838
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| ||  ||||| || ||| | ||||||||  |  |||||| ||||| |||||||  | ||||||| |||  || |||||||| ||||    
T  6411979 gtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaa--acagggtaaggctgcgtacaatacaccaaat 6411882  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    | ||||| ||||||||||||| | ||||||||||||||||||||    
T  6411881 gatgggaccccttcccagaccttgcgtatgcgggagctttagtg 6411838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 16735440 - 16735581
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||  ||||| |||||||| || ||||||| |||||  ||| || || ||||||| |||  || |||||||| ||||    
T  16735440 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctctt--gtagaaaaacagggtaaggctgcgtacaatacaccaaat 16735537  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| ||| || ||||||||| ||||| ||||    
T  16735538 ggtgggaccccttcccggacactgcgtatgcggtagcttcagtg 16735581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 320
Target Start/End: Original strand, 516417 - 516553
Alignment:
Q  186 ttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac---aaaatggtggg 282  Q
    ||||| || ||||||||| ||||| |||||||| || ||||||| ||||| ||||||| || ||||||| |||  |  ||||| ||   ||||||| |||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgcacaataaaccaaaaaatggcggg 516515  T
Q  283 agcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    | |||||||| |||||| ||||||||||||||||||||    
T  516516 accccttccccgaccctgcgtatgcgggagctttagtg 516553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 319
Target Start/End: Complemental strand, 54374486 - 54374362
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aaaatggtgggagcccttccca 293  Q
    ||||||||| ||||  ||||||||  | ||||||  ||||| ||||||| |||||||||| |||  || |||| ||| |||||||||||| ||||||||     
T  54374486 gactgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaa-aatagggtaaggctgcgtacaatccaccaaaatggtgggaccccttcccg 54374388  T
Q  294 gaccctacgtatgcgggagctttagt 319  Q
    |||||| | |||||||||||||||||    
T  54374387 gaccctgcatatgcgggagctttagt 54374362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 25517242 - 25517186
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||||||||||||| |||||||| || ||| ||||||| ||||||||||||    
T  25517242 caatacacaaaatggtgggaccccttcccggatcctgcgtatgctggagctttagtg 25517186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 25944466 - 25944609
Alignment:
Q  175 cagtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aa 273  Q
    ||||||||||||||||  | ||||||||| ||| | |||||||| || ||||| | ||||  ||||||| | | ||| || |||  || |||||||| ||    
T  25944466 cagtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaact-gggcaaggctgagtacaatacaccaa 25944564  T
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttag 318  Q
    |||||||||| |||||||| |||||| |||||| |||||||||||    
T  25944565 aatggtgggaccccttccctgaccctgcgtatgtgggagctttag 25944609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 33235529 - 33235672
Alignment:
Q  177 gtaaagttgttgtcgtgcgac-tgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaa 275  Q
    |||||||||||||| || ||| |||||| |||| ||||||| |  |  ||| || ||||| ||||||| || |||||||  || ||| |||||||| |||    
T  33235529 gtaaagttgttgtcatgtgacatgaaaggtcacaagttcaaatcgtgtaaagagcctcttgtgtaaaaaaacagggtaagactgtgtacaatacactaaa 33235628  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||| || |||||| ||||||||||| ||||||||||    
T  33235629 tggtggga-cccctcgcagaccttacgtatgcggaagctttagtg 33235672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 53996724 - 53996581
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aaaa 275  Q
    ||||| |||||||| |  ||||||||| ||||| ||||||||  | ||||||  ||||| ||||||| || ||||||| |||   | |||||||| ||||    
T  53996724 gtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaa-aacagggtaaggctgcttacaatacaccaaaa 53996626  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| |||||||| ||| || |||||| |||||||||||||    
T  53996625 tggtgggaccccttccctgacactgcgtatgtgggagctttagtg 53996581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 7942993 - 7943131
Alignment:
Q  181 agttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtg 280  Q
    |||||||||| || ||||| ||| |||||  ||||||| || |||||||  |||| | ||||| || |||||||  ||  || |||||||  ||||||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaa-aacagggtaagactgcgtacaatacatcaaatggtg 7943091  T
Q  281 ggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||| ||||| ||||||| | ||||||||||||||||||||    
T  7943092 ggatccctttccagaccatgcgtatgcgggagctttagtg 7943131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 320
Target Start/End: Complemental strand, 44403622 - 44403571
Alignment:
Q  269 cacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||||||||| |||||||| |||||||||||||| | ||||||||||    
T  44403622 cacaaaatggtgggaccccttcccggaccctacgtatgctgaagctttagtg 44403571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 320
Target Start/End: Complemental strand, 45948968 - 45948854
Alignment:
Q  205 tcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgta 304  Q
    ||||| |||||| | || ||||||  ||||| ||||||| |||||||||| |||   | |||||||| || |||||||| |||||| | |||||| ||||    
T  45948968 tcacgggttcaattcctggaaacaacctcttgtgtaaaa-aatagggtaaggctgcatacaatacaccaattggtgggaccccttctcggaccctgcgta 45948870  T
Q  305 tgcgggagctttagtg 320  Q
    ||||||||||||||||    
T  45948869 tgcgggagctttagtg 45948854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 7697043 - 7696977
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaa 243  Q
    |||||||||||||| || |||| |||| ||||| |||||||| || ||||||||||||| |||||||    
T  7697043 gtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa 7696977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 10300585 - 10300635
Alignment:
Q  273 aaatggtgggagcccttcccagaccctacgtatgcgggagctttagtgtac 323  Q
    ||||| |||||  |||||||||||||||||||||||||||||||| |||||    
T  10300585 aaatgatgggactccttcccagaccctacgtatgcgggagctttaatgtac 10300635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 10870109 - 10870043
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaa 243  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| |||||||    
T  10870109 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 10870043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 52926291 - 52926237
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttag 318  Q
    |||||||| |||||||||||  ||||||| |||||| ||||||||||||||||||    
T  52926291 caatacaccaaatggtgggacaccttcccggaccctgcgtatgcgggagctttag 52926237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 320
Target Start/End: Complemental strand, 5173876 - 5173735
Alignment:
Q  179 aaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaaat 276  Q
    |||||||||||| || ||||||||| ||||| |||||||| || ||||||  ||||| |||||||  | ||  ||| | |   ||||||||||  |||||    
T  5173876 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaacaaag--taaggttgcatgcaatacaccaaaaat 5173779  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||  |||||||| |||| | ||||||||||||||||||||    
T  5173778 ggtggggccccttcccggaccttgcgtatgcgggagctttagtg 5173735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 319
Target Start/End: Original strand, 9607202 - 9607345
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa-- 274  Q
    |||||||||||||| || ||||||||| |||   |||||||| || ||||||| |||||  |||||| || ||||||| |||  ||  ||||||| ||      
T  9607202 gtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaa-aacagggtaaggctgcgtagaatacaccaata 9607300  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagt 319  Q
    ||| ||||| ||||||||||||||  | |||||||||||||||||    
T  9607301 atgttgggaccccttcccagaccccgcatatgcgggagctttagt 9607345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 320
Target Start/End: Complemental strand, 10795554 - 10795439
Alignment:
Q  206 cacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaaatggtgggagcccttcccagaccctacgt 303  Q
    |||| |||||||| || ||||||| ||||| ||||||| |  ||||||| |||  || ||||||||  |||||||||||| |||||||  |||||| |||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagac-agggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 10795456  T
Q  304 atgcgggagctttagtg 320  Q
    |||||||||||| ||||    
T  10795455 atgcgggagcttcagtg 10795439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 829600 - 829458
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac-aaaa 275  Q
    ||||||||||||||  | || ||||||| | |||||||||||||||||||||  ||||| | ||||  || |  |||||| |  || |||||||| ||||    
T  829600 gtaaagttgttgtcacgtgattgaaagacc-cgagttcaagttctagaaacaacctcttgtctaaag-aacatagtaaagttgcgtacaatacaccaaaa 829503  T
Q  276 tggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||  ||||| ||||||| ||||||||||||    
T  829502 tggtgggaccccttcccgaaccctgcgtatgcaggagctttagtg 829458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 34771436 - 34771380
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| |||||||| |||||| | |||||||||||| |||||    
T  34771436 caatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtg 34771380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 40968611 - 40968659
Alignment:
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| || ||||||| ||||||||| ||||||||||||||||||    
T  40968611 aaaatggtgagaccccttcctagaccctacatatgcgggagctttagtg 40968659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 43114995 - 43114884
Alignment:
Q  210 agttcaagttctagaaacagtctcttctgtaaaataatagggtaaag-ctatgtgcaatacacaaaatggtgggagcccttcccagaccc-tacgtatgc 307  Q
    ||||||||| || ||||||| ||||| ||||||| || ||||||| | |||  | |||||||| ||||||||||| |||||||  ||||| | |||||||    
T  43114995 agttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaagggctacctacaatacaccaaatggtggga-cccttcctggacccctgcgtatgc 43114897  T
Q  308 gggagctttagtg 320  Q
    |||||||||||||    
T  43114896 gggagctttagtg 43114884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 320
Target Start/End: Original strand, 31592882 - 31592988
Alignment:
Q  211 gttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgtatgcggg 310  Q
    |||||||| || ||||||| ||||| ||||||| |   |||||| |||  || |||||||| |||||||||||  ||||||| |||||| | ||||||||    
T  31592882 gttcaagtcctggaaacagcctcttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaatggtgggactccttcccggaccctgcatatgcggg 31592978  T
Q  311 agctttagtg 320  Q
    |||| |||||    
T  31592979 agctctagtg 31592988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 33926100 - 33926224
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaa-aatggtgggagcccttccca 293  Q
    ||||||||| ||| | |||||||| || |||| || ||||| |||||||  | ||||||| ||| ||| |||||||| | |||||||||| |||||||      
T  33926100 gactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaaaa--acagggtaaggctgtgtacaatacaccataatggtgggaccccttcctg 33926197  T
Q  294 gaccctacgtatgcgggagctttagtg 320  Q
    |||||| | |||||| |||||||||||    
T  33926198 gaccctgcatatgcgagagctttagtg 33926224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 45786327 - 45786230
Alignment:
Q  224 aaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||| ||||| ||||||| || ||||||| |||  || ||||||||  |||||||||||| |||||||| |||||| || |||| ||||||||||||    
T  45786327 aaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtg 45786230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 31904929 - 31904872
Alignment:
Q  264 caatacacaaaatggtgggagccc-ttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| ||| |||||||| | ||||| ||||||||||||||||    
T  31904929 caatacaccaaatggtgggacccccttcccagatcttacgtgtgcgggagctttagtg 31904872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 320
Target Start/End: Original strand, 14986990 - 14987100
Alignment:
Q  211 gttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa--atggtgggagcccttcccagaccctacgtatgcg 308  Q
    |||||||| || ||||||| ||||| ||||||| || ||||||| |||  || |||||||| ||  ||||||||| || ||||| |||| | | ||||||    
T  14986990 gttcaagtcctggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcg 14987088  T
Q  309 ggagctttagtg 320  Q
    ||||||||||||    
T  14987089 ggagctttagtg 14987100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 15797305 - 15797361
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| |||||||| |||||| | |||| ||||||| |||||    
T  15797305 caatacaccaaatggtgggaccccttcccggaccctgcatatgtgggagctctagtg 15797361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 24577920 - 24577976
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| || |||||||||||| | ||| |||||||| |||||    
T  24577920 caatacactaaatggtgggatcctttcccagaccctgcatatacgggagctctagtg 24577976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 24578010 - 24578066
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| |||||||||||  | |||||||||||||| ||||||||| || |||||    
T  24578010 caatacactaaatggtgggactctttcccagaccctacatatgcgggaactctagtg 24578066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 53062037 - 53062089
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacag 229  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || |||||||    
T  53062037 gtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacag 53062089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 10787 - 10929
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||| ||| ||||| ||||||| |||  |||||  ||||| ||||||| || ||||||  |||  || |||||||| ||||    
T  10787 gtaaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaa-aacagggtagggctgcgtccaatacaccaaat 10885  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||    
T  10886 ggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 10929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 316
Target Start/End: Complemental strand, 12222075 - 12221935
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa-- 274  Q
    |||||||||||||| || ||||||||| ||||| ||||||||  | ||||||| ||||| ||||||| || ||||||| |||  || |||||||| ||      
T  12222075 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaa-aacagggtaaggctgcgtacaatacaccaata 12221977  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagcttt 316  Q
    ||||||||| |||||||| |||||| ||||||||||||||||    
T  12221976 atggtgggaccccttcccggaccctgcgtatgcgggagcttt 12221935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 1346941 - 1347081
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| | ||| ||||||| |   |||||| |||  || |||||||| ||||    
T  1346941 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaat 1347037  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| | |||||||||||| |||||    
T  1347038 ggtgggaccccttcccggaccctgcatatgcgggagctctagtg 1347081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 1354913 - 1354773
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||  |||||||| || ||||||| ||||| ||||||| |   |||||| |||  || |||||||| ||||    
T  1354913 gtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaaca---gggtaaggctgcgtacaatacaccaaat 1354817  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| | |||||||||||| |||||    
T  1354816 ggtgggaccccttcccggaccctgcatatgcgggagctctagtg 1354773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 320
Target Start/End: Complemental strand, 29356009 - 29355871
Alignment:
Q  183 ttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaa--atggtg 280  Q
    |||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| ||||| | || ||||||| |||  || |||||||| ||  ||||||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaga-aacagggtaaggctgcgtacaatacaccaataatggtg 29355911  T
Q  281 ggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||| |||||||| |||||| ||||||||||||||||||||    
T  29355910 ggaccccttcccggaccctgcgtatgcgggagctttagtg 29355871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 3815235 - 3815093
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||  ||||| |||||||| || ||||||| || || ||||||| |||| ||||   ||  || |||||||| ||||    
T  3815235 gtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaa-aatatggtacgactgcgtacaatacaccaaat 3815137  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| || |||||  ||||||||||||||| ||||||||||    
T  3815136 ggtgggaccctttcccgaaccctacgtatgcggaagctttagtg 3815093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 320
Target Start/End: Complemental strand, 32728326 - 32728173
Alignment:
Q  165 ttggtgtaaccagtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgc 264  Q
    |||||| ||| ||||||||||||||| || ||||||||| ||||   |||||||| | ||||||  ||||| ||||||| || |||||||  || ||| |    
T  32728326 ttggtggaacgagtaaagttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaa-aacagggtaagactgtgtac 32728228  T
Q  265 aatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||| || |||| ||||   || |||||||||||||||||||||||| ||||||||    
T  32728227 aatataccaaatagtggtc-cctttcccagaccctacgtatgcgggaactttagtg 32728173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 9161100 - 9161243
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaataca-caa-a 274  Q
    |||||||||||||| || ||||||||| ||||  |||||||| || ||||||| ||||| ||||||  || || |||| |||  || ||||||| ||| |    
T  9161100 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaa--aacagagtaaggctgcgtacaatacatcaata 9161197  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||| | |||||| ||||||||| ||||||||||    
T  9161198 atggtgggaccccttctcggaccctgcgtatgcggaagctttagtg 9161243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 12885984 - 12886032
Alignment:
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  12885984 aaaatggtgggaccccttcccagaccctgcgtatgtgggagctttagtg 12886032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 320
Target Start/End: Complemental strand, 2166571 - 2166426
Alignment:
Q  176 agtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aa 273  Q
    ||||||||||||||  || ||||||||| ||||| |||||||| || ||||||  ||||| |||||||| | ||| ||| | |  || ||||||||  |     
T  2166571 agtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaat-acaggataaggttgcgtacaatacaccaat 2166473  T
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||| |||||||| |||||||  ||| ||||||||||||||    
T  2166472 aatggtgggaccccttcccggaccctatatattcgggagctttagtg 2166426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 320
Target Start/End: Complemental strand, 2178204 - 2178059
Alignment:
Q  176 agtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aa 273  Q
    ||||||||||||||  || ||||||||| ||||| |||||||| || ||||||  ||||| |||||||| | ||| ||| | |  || ||||||||  |     
T  2178204 agtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaat-acaggataaggttgcgtacaatacaccaat 2178106  T
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||| |||||||| |||||||  ||| ||||||||||||||    
T  2178105 aatggtgggaccccttcccggaccctatatattcgggagctttagtg 2178059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 32579488 - 32579543
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagt 319  Q
    |||||| | ||||||||||| ||||||||||||||| | |||||||||||||||||    
T  32579488 caataccccaaatggtgggaccccttcccagaccctgcatatgcgggagctttagt 32579543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 317
Target Start/End: Complemental strand, 18277261 - 18277212
Alignment:
Q  268 acacaaaatggtgggagcccttcccagaccctacgtatgcgggagcttta 317  Q
    |||| ||||||||||| ||||||| |||| ||||||||||||||||||||    
T  18277261 acaccaaatggtgggaccccttcctagactctacgtatgcgggagcttta 18277212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 13267788 - 13267844
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| |||||||  |||||| ||||||||||||||| ||||    
T  13267788 caatacaccaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtg 13267844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 15866195 - 15866055
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||| | || || |||||| ||| | |||||| | || ||||||| |||||  |||||| || |||||||||||  ||  ||||||| ||||    
T  15866195 gtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaa-aacagggtaaagctgcgt--aatacaccaaat 15866099  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||    
T  15866098 ggtgggaccccttcccggaccctgcgtttgcgggatctatagtg 15866055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 24097649 - 24097697
Alignment:
Q  273 aaatggtgggagcccttcccagaccctacgtatgcgggagctttagtgt 321  Q
    ||||||||||| |||||||| |||||| ||||||||| |||||||||||    
T  24097649 aaatggtgggaccccttcccggaccctgcgtatgcggaagctttagtgt 24097697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 383832 - 383781
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctt 315  Q
    |||||||| |||| |||||| |||||| |||||||| |||||||||||||||    
T  383832 caatacaccaaattgtgggaccccttctcagaccctgcgtatgcgggagctt 383781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 6808468 - 6808514
Alignment:
Q  274 aatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||||    
T  6808468 aatggtgggaccccttcccggaccctgtgtatgcgggagctttagtg 6808514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 10734970 - 10734922
Alignment:
Q  271 caaaatggtgggagcccttcccagaccctacgtatgcgggagctttagt 319  Q
    |||| |||||||  |||||||| |||||| |||||||||||||||||||    
T  10734970 caaagtggtgggcccccttcccggaccctgcgtatgcgggagctttagt 10734922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 11395831 - 11395879
Alignment:
Q  271 caaaatggtgggagcccttcccagaccctacgtatgcgggagctttagt 319  Q
    |||| |||||||| |||||||| || ||| |||||||||||||||||||    
T  11395831 caaagtggtgggaccccttcccggatcctgcgtatgcgggagctttagt 11395879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 314
Target Start/End: Original strand, 14553489 - 14553626
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaa- 275  Q
    |||||||||||||| || |||| |||| ||||  |||||||| || |||| ||  |||| ||||||| |||||||||| ||| |||  ||||||| |||     
T  14553489 gtaaagttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaa-aatagggtaaggctgtgtataatacaccaaaa 14553586  T
Q  276 -tggtgggagcccttcccagaccctacgtatgcgggagct 314  Q
     |||||||| ||||||  |||||||  |||||||||||||    
T  14553587 ctggtgggaccccttcgtagaccctgtgtatgcgggagct 14553626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 23930199 - 23930143
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| | ||||||||| |||||| | |||||| | ||||||||||||||||||    
T  23930199 caatacaccagatggtgggaccccttcacggaccctgcttatgcgggagctttagtg 23930143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 317
Target Start/End: Complemental strand, 29016333 - 29016301
Alignment:
Q  285 cccttcccagaccctacgtatgcgggagcttta 317  Q
    ||||||||||||||| |||||||||||||||||    
T  29016333 cccttcccagaccctgcgtatgcgggagcttta 29016301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 320
Target Start/End: Complemental strand, 13186 - 13040
Alignment:
Q  172 aaccagtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac 271  Q
    |||| |||||||||||||| || ||||||||| ||||  |||||||| || ||||||| |||||  ||||||  | | ||||| |||  || ||||||||    
T  13186 aaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaa--acaaggtaaggctgcgtacaatacac 13089  T
Q  272 aaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
      |||||||||| ||||||||||||||| |||||||||| |||||||||    
T  13088 cgaatggtgggaccccttcccagaccctgcgtatgcgggggctttagtg 13040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 58954 - 59098
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacac--aaa 274  Q
    ||||| || ||||| || ||||||||| ||||| |||||||| || ||||||| ||||| | ||||| || |||||||  ||  || ||||||||  |||    
T  58954 gtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaa-aacagggtaagactgcgtacaatacaccaaaa 59052  T
Q  275 atggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||||| |||||||||||| || ||||||||||||||||||||    
T  59053 atggtgggaccccttcccagactctgcgtatgcgggagctttagtg 59098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 320
Target Start/End: Original strand, 30556 - 30696
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||  |||||||| || ||||||| ||||| ||||||| |   |||||  |||  || |||||||| ||||    
T  30556 gtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgtaaaaca---gggtagggctgcgtacaatacaccaaat 30652  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    ||||||| |||||||| |||||| | |||||||||||| |||||    
T  30653 ggtgggaccccttcccggaccctgcatatgcgggagctctagtg 30696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 10206 - 10072
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| |||||   || || ||||  ||  || |||||||| ||||    
T  10206 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa---aacagagtaagactgcgtacaatacaccaaat 10110  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagct 314  Q
     |||||| |||||||| |||||| | ||||| ||||||    
T  10109 agtgggaccccttcccggaccctgcatatgcaggagct 10072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 20534 - 20400
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||||| |||||||| || ||||||| ||||| |||||   || || ||||  ||  || |||||||| ||||    
T  20534 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa---aacagagtaagactgcgtacaatacaccaaat 20438  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagct 314  Q
     |||||| |||||||| |||||| | ||||| ||||||    
T  20437 agtgggaccccttcccggaccctgcatatgcaggagct 20400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 226564 - 226458
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| |||||  ||||||| |||||||||| ||||| | ||||| || ||||||| |||   | |||||||  ||||    
T  226564 gtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaatacatcaaat 226465  T
Q  277 ggtggga 283  Q
    |||||||    
T  226464 ggtggga 226458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 320
Target Start/End: Complemental strand, 1743 - 1603
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaat 276  Q
    |||||||||||||| || ||||||||| ||| | |||||||| ||  |||||  ||||| ||||||| |   || ||| |||   | |||||||| ||||    
T  1743 gtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaaaaca---ggataaggctgcatacaatacaccaaat 1647  T
Q  277 ggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    | ||||| |||||||| |||||  ||||||||||||||||||||    
T  1646 gatgggaccccttcccggacccggcgtatgcgggagctttagtg 1603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 24205 - 24149
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| |||||||| |||||| | |||||||||||| |||||    
T  24205 caatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtg 24149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 320
Target Start/End: Complemental strand, 72998 - 72883
Alignment:
Q  205 tcacgagttcaagttctagaaaca-gtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccagaccctacgt 303  Q
    ||||| |||||||| ||||||||| ||||||| ||||||| || | ||||| |||   | |||||||| ||||||| | | |||||||| || ||| |||    
T  72998 tcacgggttcaagtcctagaaacaagtctcttgtgtaaaa-aacacggtaaggctgcctacaatacaccaaatggtagtaccccttcccggaacctgcgt 72900  T
Q  304 atgcgggagctttagtg 320  Q
    |||||||||||||||||    
T  72899 atgcgggagctttagtg 72883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 48706 - 48650
Alignment:
Q  264 caatacacaaaatggtgggagcccttcccagaccctacgtatgcgggagctttagtg 320  Q
    |||||||| ||||||||||| |||||||| |||||| | |||||||||||| |||||    
T  48706 caatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtg 48650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 11126 - 11248
Alignment:
Q  195 gactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaataatagggtaaagctatgtgcaatacacaaaatggtgggagcccttcccag 294  Q
    ||||||||| ||||| |||||||| || ||||||| ||||| ||||||| ||    |||| |||   | |||||||| |||||||||||  ||||||| |    
T  11126 gactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacaaa---gtaaggctgcttacaatacaccaaatggtgggacaccttcccgg 11222  T
Q  295 accctacgtatgcgggagctttagtg 320  Q
    ||||| | |||||||||||| |||||    
T  11223 accctgcatatgcgggagctctagtg 11248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 43106 - 43172
Alignment:
Q  177 gtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaa 243  Q
    |||||||| ||||| || || |||||| ||||||||||| || |||||||||| ||||| |||||||    
T  43106 gtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaa 43172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 4133 - 4202
Alignment:
Q  176 agtaaagttgttgtcgtgcgactgaaagatcacgagttcaagttctagaaacagtctcttctgtaaaata 245  Q
    ||||||||||||||  || ||||||||| ||||| |||||||| || ||||||  ||||| |||||||||    
T  4133 agtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaata 4202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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