View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13427_low_19 (Length: 316)
Name: NF13427_low_19
Description: NF13427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13427_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 13 - 303
Target Start/End: Original strand, 47258212 - 47258502
Alignment:
| Q |
13 |
aatatatcacacaaagaaagtggtgagacccacgtaaaatttaccgttaatatgagatgaattagagattaacatttcactacacatgcagcaatggagg |
112 |
Q |
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| T |
47258212 |
aatatatcacacaaagaaagtggtgagacccacgtaaattttaccgttaatatgagatgaattagagattaacatttcactacacatgcagcaatggagg |
47258311 |
T |
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| Q |
113 |
aggggagactagagctgaaacacattttatcgggcccacacagtgtaagtttgcctctcaataaatttgatatcaaattgaataagagagaagagaacgt |
212 |
Q |
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| T |
47258312 |
aggggagactagagctgaaacacattttatcgggcccacacagtgtaagtttgcctctcaataaatttgatatcaaattgaataagagagaagagaacgt |
47258411 |
T |
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| Q |
213 |
tgactagtgaggaatatgctaagctaaaaacattagagtggaaaatgtttttatgcctatgaaaaattcacttgtatggtatgtgagacct |
303 |
Q |
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| T |
47258412 |
tgattagtgaggaatatgctaagctaaaaacattagagtggaaaatgtttttatgcctatgaaaaattcacttgtatggtatgtgagacct |
47258502 |
T |
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