View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13429_high_21 (Length: 261)
Name: NF13429_high_21
Description: NF13429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13429_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 27066378 - 27066129
Alignment:
| Q |
1 |
cgtaagctatagcaagaatttgaacaaacctgagaatactttcaagaactatggtaaaggaagttttgctgctcaagagaaattcaccaattacagagat |
100 |
Q |
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| T |
27066378 |
cgtaagctatagtaagaatttgaacaaacctgagaatactttcaagaactatggtaaaggaagttttgctgctcaagagaaattcaccaattacagagat |
27066279 |
T |
|
| Q |
101 |
ggagctggttctggtgatgattctttcacttcgtatggtgagaattcgcagcgcggggtcaaggtggatttcaataactacggtcttaatccaggttatc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |
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| T |
27066278 |
ggagctggttctggtgatgattctttcacttcgtatggtgagaattcgcagcgcggggtcaaggtggatttcaataactacggtcaaaatccagattatc |
27066179 |
T |
|
| Q |
201 |
caaaatctccaggaagtgaaactttcaaaggctatgctaaaggtgatgat |
250 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
27066178 |
caaaatctccaggaagtgaaactttcaaaggctatgctaaaggtgctgat |
27066129 |
T |
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