View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13429_high_3 (Length: 642)

Name: NF13429_high_3
Description: NF13429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13429_high_3
NF13429_high_3
[»] chr5 (53 HSPs)
chr5 (19-311)||(10510918-10511212)
chr5 (317-449)||(10511513-10511645)
chr5 (192-345)||(42641110-42641264)
chr5 (167-340)||(7736271-7736445)
chr5 (166-340)||(30251922-30252097)
chr5 (548-631)||(12498569-12498652)
chr5 (548-631)||(26571133-26571216)
chr5 (548-631)||(34147479-34147562)
chr5 (184-290)||(1041924-1042030)
chr5 (549-631)||(21207229-21207311)
chr5 (548-631)||(12498897-12498980)
chr5 (548-631)||(19514932-19515015)
chr5 (548-631)||(25940523-25940606)
chr5 (548-631)||(26570731-26570814)
chr5 (548-631)||(43464161-43464243)
chr5 (548-629)||(10098521-10098602)
chr5 (548-631)||(34147143-34147224)
chr5 (548-631)||(3888241-3888324)
chr5 (548-631)||(22729409-22729491)
chr5 (548-631)||(37780322-37780404)
chr5 (549-631)||(43463759-43463840)
chr5 (164-290)||(25731185-25731313)
chr5 (169-269)||(1042040-1042140)
chr5 (548-631)||(19514527-19514611)
chr5 (548-631)||(25940983-25941066)
chr5 (548-627)||(37610204-37610282)
chr5 (549-631)||(2817152-2817234)
chr5 (549-631)||(10098910-10098991)
chr5 (200-340)||(1637945-1638086)
chr5 (548-627)||(22729010-22729088)
chr5 (560-631)||(41072183-41072254)
chr5 (549-631)||(3888631-3888713)
chr5 (549-631)||(30401885-30401967)
chr5 (543-631)||(2817544-2817631)
chr5 (543-627)||(37780715-37780799)
chr5 (549-631)||(11316717-11316799)
chr5 (549-631)||(11316943-11317025)
chr5 (543-631)||(37610587-37610674)
chr5 (548-624)||(18817587-18817663)
chr5 (549-622)||(11351405-11351478)
chr5 (200-340)||(31112388-31112529)
chr5 (548-624)||(11350810-11350885)
chr5 (548-624)||(18816954-18817030)
chr5 (548-631)||(42919307-42919389)
chr5 (549-623)||(31569910-31569983)
chr5 (548-600)||(5187830-5187882)
chr5 (186-289)||(17317360-17317464)
chr5 (548-600)||(18433316-18433368)
chr5 (548-600)||(25116061-25116113)
chr5 (548-600)||(25175151-25175203)
chr5 (194-289)||(33085274-33085370)
chr5 (548-600)||(33324838-33324890)
chr5 (209-340)||(35626600-35626732)
[»] chr7 (48 HSPs)
chr7 (163-340)||(31860252-31860430)
chr7 (548-631)||(20419293-20419376)
chr7 (548-631)||(22740158-22740241)
chr7 (549-631)||(18863970-18864052)
chr7 (543-631)||(37888830-37888918)
chr7 (548-631)||(3205062-3205145)
chr7 (548-631)||(9035262-9035345)
chr7 (548-631)||(10533036-10533119)
chr7 (548-631)||(13741559-13741642)
chr7 (548-631)||(13744202-13744284)
chr7 (548-631)||(17156969-17157052)
chr7 (200-338)||(23070190-23070329)
chr7 (548-631)||(37889228-37889311)
chr7 (548-631)||(37972365-37972448)
chr7 (549-631)||(20418891-20418973)
chr7 (550-631)||(48359627-48359707)
chr7 (548-631)||(29292924-29293007)
chr7 (548-631)||(48359322-48359404)
chr7 (549-631)||(22740560-22740641)
chr7 (167-275)||(31245263-31245372)
chr7 (543-631)||(29293315-29293403)
chr7 (548-631)||(37971962-37972045)
chr7 (539-631)||(3204662-3204752)
chr7 (548-631)||(38826882-38826965)
chr7 (192-337)||(40019445-40019590)
chr7 (548-631)||(9034869-9034953)
chr7 (194-289)||(22680724-22680820)
chr7 (560-631)||(18864371-18864442)
chr7 (549-631)||(42418997-42419079)
chr7 (549-627)||(36527387-36527464)
chr7 (199-281)||(7833554-7833637)
chr7 (548-631)||(36527767-36527850)
chr7 (548-631)||(42418593-42418676)
chr7 (548-623)||(46816288-46816363)
chr7 (171-336)||(25240250-25240416)
chr7 (548-607)||(16198970-16199029)
chr7 (543-624)||(44599486-44599567)
chr7 (548-624)||(44600111-44600187)
chr7 (548-624)||(8643742-8643818)
chr7 (548-624)||(13863315-13863391)
chr7 (548-624)||(13863933-13864008)
chr7 (203-289)||(2256443-2256529)
chr7 (239-308)||(3338457-3338527)
chr7 (544-594)||(5735553-5735603)
chr7 (167-336)||(32956494-32956664)
chr7 (548-600)||(3687656-3687708)
chr7 (548-600)||(8953889-8953940)
chr7 (548-600)||(9412325-9412377)
[»] chr4 (62 HSPs)
chr4 (173-340)||(37626694-37626862)
chr4 (166-345)||(33395304-33395484)
chr4 (548-627)||(293190-293269)
chr4 (548-631)||(4239335-4239418)
chr4 (548-631)||(39744434-39744517)
chr4 (548-631)||(43292039-43292122)
chr4 (543-631)||(169408-169496)
chr4 (543-631)||(32703619-32703707)
chr4 (548-631)||(9023649-9023732)
chr4 (548-631)||(25161880-25161963)
chr4 (548-631)||(28196742-28196825)
chr4 (548-631)||(39744032-39744115)
chr4 (548-631)||(9380309-9380392)
chr4 (548-631)||(9380710-9380793)
chr4 (548-631)||(26207715-26207798)
chr4 (548-631)||(28196348-28196431)
chr4 (548-631)||(48405964-48406046)
chr4 (548-630)||(292784-292866)
chr4 (199-332)||(41259980-41260114)
chr4 (164-289)||(53654262-53654388)
chr4 (548-631)||(169015-169099)
chr4 (548-631)||(23539843-23539924)
chr4 (548-631)||(9023246-9023329)
chr4 (548-631)||(23540221-23540304)
chr4 (548-631)||(26207363-26207445)
chr4 (168-340)||(11086241-11086417)
chr4 (548-631)||(32703227-32703310)
chr4 (199-341)||(35422421-35422564)
chr4 (548-631)||(43292326-43292409)
chr4 (561-631)||(44468892-44468962)
chr4 (199-336)||(52837919-52838057)
chr4 (194-289)||(14124199-14124295)
chr4 (548-631)||(39086592-39086675)
chr4 (561-631)||(25162282-25162352)
chr4 (543-631)||(39912456-39912543)
chr4 (192-289)||(37858199-37858298)
chr4 (203-345)||(41163046-41163189)
chr4 (564-631)||(48406354-48406421)
chr4 (166-336)||(16502386-16502556)
chr4 (186-289)||(388392-388497)
chr4 (192-311)||(54335152-54335272)
chr4 (200-295)||(48497420-48497516)
chr4 (568-631)||(12757788-12757851)
chr4 (548-627)||(39912056-39912134)
chr4 (199-259)||(21865192-21865252)
chr4 (199-259)||(21921053-21921113)
chr4 (548-624)||(50678781-50678857)
chr4 (193-276)||(35827787-35827870)
chr4 (548-631)||(36095819-36095902)
chr4 (549-624)||(36096451-36096526)
chr4 (200-244)||(48582187-48582231)
chr4 (548-624)||(50679400-50679476)
chr4 (548-624)||(56505695-56505771)
chr4 (549-624)||(43050610-43050685)
chr4 (549-631)||(12758173-12758254)
chr4 (548-602)||(24775781-24775835)
chr4 (187-290)||(47519251-47519356)
chr4 (548-600)||(13198906-13198958)
chr4 (188-260)||(32906166-32906238)
chr4 (548-624)||(43051228-43051304)
chr4 (548-624)||(45830172-45830248)
chr4 (268-336)||(48582248-48582316)
[»] chr3 (48 HSPs)
chr3 (175-340)||(54153848-54154014)
chr3 (548-631)||(47666304-47666387)
chr3 (549-631)||(53766166-53766248)
chr3 (200-336)||(44765246-44765383)
chr3 (543-631)||(42673265-42673352)
chr3 (548-631)||(48159899-48159982)
chr3 (548-631)||(53687890-53687973)
chr3 (170-336)||(32375193-32375361)
chr3 (543-631)||(10348768-10348856)
chr3 (543-631)||(48160302-48160390)
chr3 (544-631)||(22429565-22429651)
chr3 (538-631)||(44007959-44008052)
chr3 (165-340)||(47510715-47510891)
chr3 (543-631)||(53688272-53688359)
chr3 (548-631)||(26007184-26007266)
chr3 (548-631)||(40848523-40848605)
chr3 (548-631)||(40848930-40849013)
chr3 (548-631)||(42672980-42673062)
chr3 (543-621)||(3353125-3353202)
chr3 (549-631)||(27238869-27238951)
chr3 (167-338)||(4195301-4195473)
chr3 (543-631)||(24485429-24485516)
chr3 (560-631)||(3353520-3353591)
chr3 (187-333)||(3432602-3432749)
chr3 (548-631)||(27238467-27238550)
chr3 (548-631)||(47665913-47665996)
chr3 (549-631)||(26007588-26007670)
chr3 (543-631)||(42456164-42456250)
chr3 (559-631)||(24485034-24485106)
chr3 (548-631)||(36180558-36180639)
chr3 (548-631)||(10348481-10348564)
chr3 (548-631)||(36180959-36181042)
chr3 (192-321)||(42005344-42005474)
chr3 (543-631)||(44008370-44008457)
chr3 (548-631)||(22429160-22429243)
chr3 (548-624)||(21896487-21896562)
chr3 (548-631)||(8314015-8314098)
chr3 (548-607)||(42455792-42455851)
chr3 (548-607)||(53766572-53766631)
chr3 (185-342)||(51312857-51313015)
chr3 (206-264)||(25118636-25118694)
chr3 (167-264)||(20137620-20137715)
chr3 (540-600)||(20969019-20969079)
chr3 (171-260)||(9248375-9248464)
chr3 (543-600)||(10293909-10293966)
chr3 (167-264)||(23278010-23278105)
chr3 (579-631)||(1928403-1928455)
chr3 (548-600)||(10293610-10293662)
[»] scaffold0007 (1 HSPs)
scaffold0007 (167-309)||(246513-246656)
[»] chr1 (67 HSPs)
chr1 (164-290)||(8772419-8772546)
chr1 (548-631)||(26815088-26815171)
chr1 (184-340)||(12188622-12188779)
chr1 (542-631)||(21687021-21687110)
chr1 (161-345)||(26701492-26701677)
chr1 (547-631)||(50526441-50526525)
chr1 (548-631)||(46824247-46824330)
chr1 (543-631)||(9347123-9347211)
chr1 (543-631)||(13918443-13918531)
chr1 (543-631)||(26814691-26814779)
chr1 (548-631)||(4692402-4692485)
chr1 (548-631)||(6703462-6703545)
chr1 (548-631)||(20480170-20480252)
chr1 (548-629)||(20371042-20371121)
chr1 (549-631)||(28634126-28634208)
chr1 (549-631)||(48104681-48104763)
chr1 (549-631)||(50430050-50430132)
chr1 (543-631)||(27172113-27172200)
chr1 (543-631)||(48105085-48105173)
chr1 (543-631)||(50615590-50615677)
chr1 (543-631)||(50623418-50623505)
chr1 (548-631)||(9347520-9347602)
chr1 (548-631)||(19008719-19008802)
chr1 (548-627)||(32163016-32163095)
chr1 (549-631)||(999115-999196)
chr1 (549-631)||(44911406-44911488)
chr1 (549-631)||(46823846-46823928)
chr1 (548-625)||(6703869-6703946)
chr1 (543-631)||(49318135-49318222)
chr1 (543-631)||(49318412-49318499)
chr1 (548-631)||(28633722-28633805)
chr1 (548-631)||(44911027-44911110)
chr1 (548-631)||(49317754-49317836)
chr1 (171-340)||(2193237-2193407)
chr1 (549-631)||(42611583-42611665)
chr1 (200-340)||(44603632-44603773)
chr1 (550-631)||(50949534-50949615)
chr1 (548-631)||(999494-999576)
chr1 (548-631)||(13918836-13918919)
chr1 (549-631)||(42611188-42611270)
chr1 (543-631)||(20371321-20371409)
chr1 (543-631)||(47498298-47498384)
chr1 (543-621)||(20480591-20480668)
chr1 (193-340)||(4448978-4449127)
chr1 (201-290)||(15330851-15330940)
chr1 (551-616)||(32162734-32162799)
chr1 (548-627)||(27172514-27172593)
chr1 (548-631)||(39691969-39692052)
chr1 (158-327)||(42723893-42724065)
chr1 (580-631)||(50429690-50429741)
chr1 (549-631)||(44224088-44224169)
chr1 (543-624)||(6002234-6002315)
chr1 (549-622)||(50949164-50949237)
chr1 (536-600)||(17518602-17518665)
chr1 (548-624)||(49284411-49284487)
chr1 (549-600)||(1176839-1176890)
chr1 (548-631)||(4692024-4692106)
chr1 (194-288)||(7330541-7330636)
chr1 (548-595)||(50615242-50615289)
chr1 (548-595)||(50623070-50623117)
chr1 (560-622)||(21687445-21687507)
chr1 (548-602)||(47498493-47498546)
chr1 (547-624)||(6002870-6002947)
chr1 (548-600)||(47955608-47955660)
chr1 (222-336)||(3895573-3895688)
chr1 (548-602)||(8108991-8109045)
chr1 (548-600)||(47955308-47955360)
[»] chr2 (52 HSPs)
chr2 (548-631)||(7664250-7664333)
chr2 (161-289)||(31915065-31915194)
chr2 (548-631)||(8851551-8851634)
chr2 (170-308)||(8033273-8033410)
chr2 (543-631)||(7664642-7664730)
chr2 (548-631)||(5379928-5380011)
chr2 (549-631)||(8851151-8851233)
chr2 (549-631)||(26692399-26692481)
chr2 (166-340)||(31921207-31921380)
chr2 (549-631)||(41790494-41790575)
chr2 (548-631)||(5378663-5378746)
chr2 (548-627)||(37720206-37720285)
chr2 (549-631)||(26692789-26692871)
chr2 (548-629)||(18750097-18750177)
chr2 (546-631)||(19141444-19141528)
chr2 (543-631)||(17850975-17851062)
chr2 (549-631)||(19141818-19141898)
chr2 (548-631)||(41790881-41790964)
chr2 (546-631)||(6325316-6325401)
chr2 (548-631)||(16910829-16910912)
chr2 (185-264)||(35005209-35005288)
chr2 (553-631)||(6324924-6325002)
chr2 (188-289)||(12800775-12800876)
chr2 (193-289)||(38373355-38373452)
chr2 (552-631)||(7979573-7979650)
chr2 (548-631)||(16911238-16911320)
chr2 (548-631)||(17851371-17851454)
chr2 (549-631)||(5793450-5793532)
chr2 (548-631)||(7979972-7980054)
chr2 (186-340)||(31598006-31598162)
chr2 (193-336)||(16209790-16209934)
chr2 (535-624)||(26842214-26842303)
chr2 (548-624)||(2638822-2638898)
chr2 (548-624)||(2639458-2639534)
chr2 (548-624)||(26841589-26841665)
chr2 (548-624)||(38490817-38490892)
chr2 (549-631)||(18749729-18749810)
chr2 (186-285)||(29140161-29140262)
chr2 (543-600)||(30191225-30191282)
chr2 (548-624)||(18296078-18296154)
chr2 (165-258)||(37519733-37519827)
chr2 (549-624)||(7591204-7591279)
chr2 (197-264)||(13832202-13832269)
chr2 (165-220)||(14845964-14846019)
chr2 (246-340)||(37519639-37519733)
chr2 (199-308)||(2396688-2396798)
chr2 (311-345)||(5525249-5525283)
chr2 (578-624)||(7591826-7591872)
chr2 (195-264)||(4818779-4818847)
chr2 (549-602)||(18055314-18055367)
chr2 (548-600)||(20347464-20347516)
chr2 (548-600)||(30190925-30190977)
[»] chr8 (48 HSPs)
chr8 (549-631)||(34498125-34498207)
chr8 (171-340)||(27982289-27982455)
chr8 (171-340)||(28039591-28039757)
chr8 (548-631)||(37396710-37396793)
chr8 (549-631)||(15444616-15444698)
chr8 (549-631)||(25439095-25439176)
chr8 (538-631)||(16169576-16169669)
chr8 (543-631)||(9623499-9623587)
chr8 (165-336)||(12956216-12956384)
chr8 (163-339)||(22488762-22488945)
chr8 (543-631)||(24473340-24473428)
chr8 (543-631)||(37397114-37397202)
chr8 (548-631)||(17431289-17431372)
chr8 (548-631)||(20861607-20861690)
chr8 (548-631)||(41662523-41662606)
chr8 (165-341)||(41168595-41168773)
chr8 (539-607)||(25438785-25438853)
chr8 (548-631)||(6199065-6199148)
chr8 (548-631)||(24473737-24473820)
chr8 (168-271)||(29374551-29374654)
chr8 (548-631)||(34498524-34498607)
chr8 (543-624)||(9822745-9822826)
chr8 (548-624)||(13936725-13936800)
chr8 (543-631)||(16169171-16169258)
chr8 (210-289)||(44167185-44167265)
chr8 (548-631)||(6198660-6198743)
chr8 (544-595)||(33726692-33726743)
chr8 (548-631)||(2856528-2856611)
chr8 (548-631)||(15444213-15444296)
chr8 (161-264)||(34653333-34653435)
chr8 (159-284)||(31505495-31505620)
chr8 (543-624)||(22851387-22851468)
chr8 (543-624)||(39724024-39724105)
chr8 (548-624)||(9823337-9823413)
chr8 (548-624)||(13937365-13937441)
chr8 (166-340)||(8488605-8488783)
chr8 (549-624)||(13027257-13027332)
chr8 (580-631)||(33727074-33727125)
chr8 (543-624)||(3307335-3307416)
chr8 (546-631)||(15442763-15442848)
chr8 (544-600)||(765732-765788)
chr8 (548-624)||(13026637-13026713)
chr8 (548-600)||(15156185-15156237)
chr8 (171-260)||(3423718-3423807)
chr8 (543-600)||(37752416-37752473)
chr8 (548-600)||(15155885-15155937)
chr8 (548-600)||(41662403-41662455)
chr8 (548-600)||(43245873-43245925)
[»] scaffold0460 (2 HSPs)
scaffold0460 (548-631)||(332-415)
scaffold0460 (543-627)||(736-819)
[»] scaffold0069 (2 HSPs)
scaffold0069 (548-629)||(50077-50156)
scaffold0069 (543-631)||(50475-50563)
[»] scaffold0041 (2 HSPs)
scaffold0041 (548-631)||(38664-38747)
scaffold0041 (578-631)||(38283-38336)
[»] scaffold0017 (2 HSPs)
scaffold0017 (548-631)||(185243-185326)
scaffold0017 (548-631)||(184841-184924)
[»] chr6 (21 HSPs)
chr6 (548-631)||(7654517-7654600)
chr6 (548-631)||(10087827-10087910)
chr6 (548-631)||(33974268-33974351)
chr6 (549-631)||(32733965-32734047)
chr6 (543-631)||(2354406-2354493)
chr6 (548-631)||(2354779-2354862)
chr6 (548-631)||(22755058-22755141)
chr6 (564-631)||(29074341-29074408)
chr6 (564-631)||(29079105-29079172)
chr6 (564-631)||(29106914-29106981)
chr6 (200-323)||(1407313-1407434)
chr6 (543-631)||(22684327-22684414)
chr6 (543-631)||(22754654-22754741)
chr6 (560-627)||(13177029-13177096)
chr6 (543-624)||(33828987-33829068)
chr6 (548-624)||(33829612-33829688)
chr6 (172-338)||(27673651-27673817)
chr6 (194-340)||(29694302-29694449)
chr6 (192-264)||(6454541-6454612)
chr6 (186-289)||(23131462-23131566)
chr6 (548-600)||(18241856-18241908)
[»] scaffold0029 (1 HSPs)
scaffold0029 (548-631)||(9907-9991)
[»] scaffold0176 (2 HSPs)
scaffold0176 (560-631)||(19634-19705)
scaffold0176 (548-631)||(20012-20095)
[»] scaffold0802 (2 HSPs)
scaffold0802 (548-600)||(1120-1172)
scaffold0802 (548-600)||(1420-1472)
[»] scaffold0328 (1 HSPs)
scaffold0328 (548-624)||(6771-6847)
[»] scaffold0042 (1 HSPs)
scaffold0042 (203-264)||(83583-83644)


Alignment Details
Target: chr5 (Bit Score: 164; Significance: 2e-87; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 19 - 311
Target Start/End: Original strand, 10510918 - 10511212
Alignment:
Q  19 gttatcagtaaatattgtgcttaattaatggtctttgaaggtagaagagggaataggacggctttcaagggatgatatgaaagagggnnnnnnnnnttag 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||         | ||    
T  10510918 gttatcagtaaatattgtgcttaattaatggtctttgaaggtagaagagggaataggagggctttcaagagatgatatgaaagagggaaaaaaa--tgag 10511015  T
Q  119 taggggtcg----gatcatcaaattttagggatttggactcaatttaaaaaaggagaatgctaactatagcccttgaggcattagttaaagtactaaaat 214  Q
    |||||||||    ||||||||||||||||||||||| | |||||| || ||||||||||| |||| || ||||| |||||||| ||||||||| ||||||    
T  10511016 taggggtcgatcggatcatcaaattttagggatttgaattcaattaaagaaaggagaatgataaccatcgccctcgaggcattggttaaagtagtaaaat 10511115  T
Q  215 gagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaagacttgtattttcaagacaaagttttcattattgaaatctttaacta 311  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||  |||||||| |||||||| |||| |||||||    
T  10511116 gagtaactttgcattgaaaaatggtgtaattattgctaagaaaaaagtaagacttgtatttccaaagcaaagtttccattattggaatccttaacta 10511212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 317 - 449
Target Start/End: Original strand, 10511513 - 10511645
Alignment:
Q  317 cttaggacactggttagcaagacctttaaacaaatttatatcttgtcttgtgtaaaatcaaaatcaattcaactcgatgatgaatgtgttggtttgagtc 416  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  10511513 cttaagacactggttagcaagacccttaaacaaatttatattttgtcttgtgtaaaatcagaatcaattcaactcgatgatgaatgtgttcgtttgagtc 10511612  T
Q  417 taatcaattcaaaataatctatacgattaaagg 449  Q
    |||||||||||||||||||||||| ||||||||    
T  10511613 taatcaattcaaaataatctatacaattaaagg 10511645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 192 - 345
Target Start/End: Original strand, 42641110 - 42641264
Alignment:
Q  192 ggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagtttt 290  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||||||||||||||     
T  42641110 ggcattggttaaagtactaaaataagtaagtttgcatcgaaaaatggtgtaatcattgataagaaaaaagtaaagacttgtattttcaagacaaagtttc 42641209  T
Q  291 cattattgaaatctttaactattgctcttag-gacactggttagcaagacctttaa 345  Q
     |||| |  |||| |||||||||| |||| | ||||||||||||||| ||| ||||    
T  42641210 tattaatagaatccttaactattg-tctttgtgacactggttagcaaaacccttaa 42641264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 167 - 340
Target Start/End: Original strand, 7736271 - 7736445
Alignment:
Q  167 ggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa-g 265  Q
    ||||||||||||| || ||||||| | |||| ||||||||||| |||| ||||| ||| ||| ||||| | | ||||| ||||||||||||||| ||| |    
T  7736271 ggagaatgctaaccattgcccttgggacattggttaaagtacttaaataagtaagtttccattgaaaagtggcgtaatgattgctaagaaaaaattaaag 7736370  T
Q  266 acttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    |||||||||||||||| |||||||  |||| ||  ||||||||| ||||| |||||| |||||||||||||||||    
T  7736371 acttgtattttcaagataaagtttctattaatgggatctttaaccattgcccttagggcactggttagcaagacc 7736445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 166 - 340
Target Start/End: Complemental strand, 30252097 - 30251922
Alignment:
Q  166 aggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aa 264  Q
    |||||||| ||||| || ||  |||||| ||| |||||||||||||||| | ||  |||| |||||||| | ||||||||||||||||||||||||| ||    
T  30252097 aggagaattctaaccattgcatttgaggtattggttaaagtactaaaataaatatatttgtatcgaaaagtggtgtaattattgctaagaaaaaagtaaa 30251998  T
Q  265 gacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    ||||||||||| ||||||||| |||  |||| || |||| ||||| ||||| |||||| ||||||||| |||||||    
T  30251997 gacttgtatttccaagacaaaatttctattaatggaatccttaaccattgcccttagggcactggttaccaagacc 30251922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 12498569 - 12498652
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  12498569 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 12498652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 26571216 - 26571133
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  26571216 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26571133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 34147562 - 34147479
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||| | |||||| |||||||||||||||||||||||    
T  34147562 cttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctat 34147479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 184 - 290
Target Start/End: Complemental strand, 1042030 - 1041924
Alignment:
Q  184 gcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaagacttgtattttcaagaca 283  Q
    ||||||| ||||||||||||||||||||||  ||||| |||| |||||||| | ||||||| ||||||||||||||||||| |||| ||||||||||||     
T  1042030 gcccttggggcattagttaaagtactaaaaaaagtaagtttgtatcgaaaattggtgtaataattgctaagaaaaaagtaaaacttatattttcaagact 1041931  T
Q  284 aagtttt 290  Q
    |||||||    
T  1041930 aagtttt 1041924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 21207229 - 21207311
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 21207311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 12498980 - 12498897
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  12498980 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctat 12498897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 19515015 - 19514932
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||  ||||||||||||||    
T  19515015 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctat 19514932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 25940523 - 25940606
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| ||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  25940523 cttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 25940606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 26570731 - 26570814
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||| ||||||| ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  26570731 cttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctat 26570814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 43464243 - 43464161
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  43464243 cttaattgcactttt-ccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 43464161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 548 - 629
Target Start/End: Original strand, 10098521 - 10098602
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccct 629  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||||| || ||||||| |||||||||||||||||||||    
T  10098521 cttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccct 10098602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 34147143 - 34147224
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||  ||| ||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||    
T  34147143 cttaattgcactttt--cccttatagtttatcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctat 34147224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 3888241 - 3888324
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||| ||| |||||||||||||  ||||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  3888241 cttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctat 3888324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 22729491 - 22729409
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||| |||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  22729491 cttaattgcactttt-ccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 22729409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 37780322 - 37780404
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  37780322 cttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccctat 37780404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 43463759 - 43463840
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| |||| ||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  43463759 ttaattgcactttt-ccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 43463840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 164 - 290
Target Start/End: Original strand, 25731185 - 25731313
Alignment:
Q  164 aaaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaag--aaaaaag 261  Q
    |||||||||||||||| || ||| ||  |||||| |||||||||||||||| ||||| ||||||| ||||| | |||||||||||||||||  ||||||     
T  25731185 aaaggagaatgctaaccattgccttttgggcattggttaaagtactaaaataagtaagtttgcatagaaaagttgtgtaattattgctaagaaaaaaaat 25731284  T
Q  262 taagacttgtattttcaagacaaagtttt 290  Q
     |||| ||| ||||| |||||||||||||    
T  25731285 aaagatttgaatttttaagacaaagtttt 25731313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 1042140 - 1042040
Alignment:
Q  169 agaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaagact 268  Q
    |||||| |||| || ||| ||| ||||||||||||||||||||||  ||||| ||||||||||||| | ||||||| ||||||||||||||||||| |||    
T  1042140 agaatgttaaccattgcctttggggcattagttaaagtactaaaaaaagtaagtttgcatcgaaaattggtgtaataattgctaagaaaaaagtaaaact 1042041  T
Q  269 t 269  Q
    |    
T  1042040 t 1042040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 19514527 - 19514611
Alignment:
Q  548 cttaattgcactttttcccc-ctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||  |||| |||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  19514527 cttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 19514611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 25941066 - 25940983
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| || |||||||||| | |||| ||| |||||||| |||||||||| |||||||||||||||||||||||    
T  25941066 cttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctat 25940983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 627
Target Start/End: Original strand, 37610204 - 37610282
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcccc 627  Q
    ||||||||||||||| |||||||||||||  ||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  37610204 cttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgcccc 37610282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 2817152 - 2817234
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| | |||||||||||  ||||||||| |||||||| |||||| ||| |||||||||||||||||||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctat 2817234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 10098991 - 10098910
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| || |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||  |||||||    
T  10098991 ttaattgcactttt-cctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctat 10098910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 200 - 340
Target Start/End: Complemental strand, 1638086 - 1637945
Alignment:
Q  200 ttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttttcattattg 298  Q
    |||||| |||||||| | ||| |||||||| |||| | ||||||||||||||||||||||||| || | |||||||| ||||||||| |||  |||| |     
T  1638086 ttaaagaactaaaataaataagtttgcatcaaaaagttgtgtaattattgctaagaaaaaagtaaaaatttgtatttccaagacaaaatttatattaata 1637987  T
Q  299 aaatctttaactattgctcttaggacactggttagcaagacc 340  Q
     |||| ||||| ||||| |||| || ||||||||||||||||    
T  1637986 gaatcattaaccattgcccttaagatactggttagcaagacc 1637945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 548 - 627
Target Start/End: Original strand, 22729010 - 22729088
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcccc 627  Q
    ||||||||||||||| ||||||||||||| | |||||||| |||||||||  |||||||| |||||||||||||||||||    
T  22729010 cttaattgcactttt-ccccctatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttgcccc 22729088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 560 - 631
Target Start/End: Complemental strand, 41072254 - 41072183
Alignment:
Q  560 ttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||| |||||||||| |||||||| | ||||||||||| ||||||| |||||||||||||||||||||||    
T  41072254 ttttcctcctatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctat 41072183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 3888713 - 3888631
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| || | |||| |||  ||||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctat 3888631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 30401885 - 30401967
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| | | |||||||||  ||||||| |||||||||| |||||||||| |||| ||||||||||||||||||    
T  30401885 ttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccctat 30401967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 2817631 - 2817544
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||||| |||||||||||||   |||||||| ||||| || || ||||||| |||||||||||||||| ||||||    
T  2817631 tttgacttaattgcactttt-ccccctatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgctccctat 2817544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 543 - 627
Target Start/End: Complemental strand, 37780799 - 37780715
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcccc 627  Q
    |||| |||||||| |||||| |||||||||||||   |||||||| |||||||||| ||| |||| |||||||||||||||||||    
T  37780799 tttggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgcccc 37780715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 11316717 - 11316799
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| || ||||||||||  ||||||| |||||||||| || ||| ||| |||||||| ||||||||||||||    
T  11316717 ttaattgcacttttccctcctatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccctat 11316799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 11317025 - 11316943
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| || || || |||  ||||||||| |||||||||||||| |||| ||| |||||||||||||||||||    
T  11317025 ttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctat 11316943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 37610674 - 37610587
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| |||||||| |||||  |||||||||||||   |||||||| |||||||||| ||| |||| |||||||||||||||||||||||    
T  37610674 tttggcttaattgtactttc-ccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgccccctat 37610587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 18817663 - 18817587
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  18817663 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 18817587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 11351478 - 11351405
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgatttt 622  Q
    ||||||||||||||  | |||||  |||  ||||||||| ||||||||||||||| ||| ||||||||||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgatttt 11351405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 200 - 340
Target Start/End: Complemental strand, 31112529 - 31112388
Alignment:
Q  200 ttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa-gacttgtattttcaagacaaagttttcattattg 298  Q
    ||||| || |||||| ||||| |||| || |||| || |||||||||||  | | ||||| |||| | |||||||||| |||||||  |||  |||| ||    
T  31112529 ttaaactattaaaataagtaagtttgtattgaaatatggtgtaattattatttaaaaaaatgtaaagccttgtatttttaagacaatatttctattaatg 31112430  T
Q  299 aaatctttaactattgctcttaggacactggttagcaagacc 340  Q
     |||| ||||| ||||| |||||| |||||||||||||||||    
T  31112429 gaatcattaaccattgcccttagggcactggttagcaagacc 31112388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 624
Target Start/End: Original strand, 11350810 - 11350885
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||| ||||  |||||||  |||  |||||||||| |||||||||||||| ||| ||||||||||||||||    
T  11350810 cttaattgcatttttcacccctatcttttgccaattgtgca-ttttgcaccccatatttttaaacgagcgattttgc 11350885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 624
Target Start/End: Original strand, 18816954 - 18817030
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||| ||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  18816954 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 18817030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 42919307 - 42919389
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||| |||||||||| |||| |||  ||||||||| ||||| |||| |||  ||| |||||||||||||||| ||||||    
T  42919307 cttaattgctctttttcccc-tatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctat 42919389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 623
Target Start/End: Original strand, 31569910 - 31569983
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttg 623  Q
    |||||||||||||| ||||||||  ||| |||||||||| |||||||||| |||  ||| ||||||| |||||||    
T  31569910 ttaattgcactttt-ccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 31569983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 5187882 - 5187830
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| |||| |||  ||| | |||||||||||||||||||||    
T  5187882 cttaattgcacttttgccccttatcttttgttaattgtgcaattttgcacccc 5187830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 17317360 - 17317464
Alignment:
Q  186 ccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaaga-cttgtattttcaagacaa 284  Q
    |||||||||||| ||||||||  |||||| | ||| |||||||| |||| | |||| ||||||  ||||| ||| |||| |  |||||||| ||||||||    
T  17317360 ccttgaggcattggttaaagtgttaaaattaataaatttgcatcaaaaagtggtgtgattattattaagacaaaggtaaaagtttgtatttccaagacaa 17317459  T
Q  285 agttt 289  Q
    |||||    
T  17317460 agttt 17317464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 18433368 - 18433316
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  ||| | |||||||| ||||||||||||    
T  18433368 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 18433316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 25116113 - 25116061
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  ||| | |||||||| ||||||||||||    
T  25116113 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25116061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 25175203 - 25175151
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  ||| | |||||||| ||||||||||||    
T  25175203 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25175151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 289
Target Start/End: Original strand, 33085274 - 33085370
Alignment:
Q  194 cattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttt 289  Q
    |||| ||||||||  |||||| || || |||||||  |||| | ||||| |||||||||||| |||||| || | || |||||||||||||||||||    
T  33085274 cattggttaaagtgttaaaattagcaagtttgcatacaaaagtggtgtagttattgctaagacaaaagtaaaaatttatattttcaagacaaagttt 33085370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 33324890 - 33324838
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    |||||||||||||||| |||||||  ||| |||||||||  ||||||||||||    
T  33324890 cttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcacccc 33324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 340
Target Start/End: Original strand, 35626600 - 35626732
Alignment:
Q  209 taaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaaga-cttgtattttcaagacaaagttttcattattgaaatcttta 307  Q
    |||||| ||||| |||||||  |||| |||||  ||||||| ||||| |||||||| | ||| ||||||||| ||||| |||  |||| || | || |||    
T  35626600 taaaattagtaaatttgcataaaaaagtagtgcgattattggtaagacaaaagtaaaaacttatattttcaaaacaaaatttctattaatggattcctta 35626699  T
Q  308 actattgctcttaggacactggttagcaagacc 340  Q
    || ||||  |||||| |||| ||||||||||||    
T  35626700 accattgtccttagggcactagttagcaagacc 35626732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 3e-53; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 31860430 - 31860252
Alignment:
Q  163 aaaaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt 262  Q
    ||||||| ||||||||| || ||| ||||| |||| |||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||| |||||    
T  31860430 aaaaggataatgctaaccattgccattgagccattggttaaagtactaaaatgagtaagtttgcatcgaaaaatggtgtaattattgataagaagaaagt 31860331  T
Q  263 -aagacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
     ||||||||||||| |||||||||||||||||||||  |||||||||| ||||| |||||| |||||||||||||||||    
T  31860330 aaagacttgtatttccaagacaaagttttcattattagaatctttaaccattgcccttagggcactggttagcaagacc 31860252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 20419376 - 20419293
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  20419376 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 20419293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 22740158 - 22740241
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  22740158 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 22740241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 18863970 - 18864052
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 18864052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 37888830 - 37888918
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  37888830 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37888918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 3205145 - 3205062
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||||||||||||    
T  3205145 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctat 3205062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 9035345 - 9035262
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  9035345 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 9035262  T

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Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 10533036 - 10533119
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  10533036 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 10533119  T

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Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 13741559 - 13741642
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| |||| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  13741559 cttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 13741642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 13744284 - 13744202
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  13744284 cttaattgcactttt-ccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 13744202  T

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Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 17156969 - 17157052
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  17156969 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 17157052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 200 - 338
Target Start/End: Complemental strand, 23070329 - 23070190
Alignment:
Q  200 ttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttttcattattg 298  Q
    |||||||| |||||| ||||| ||||||||||||| | ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||  |||| ||    
T  23070329 ttaaagtattaaaataagtaaatttgcatcgaaaagtggtgtaatcattgctaagaaaaaagtaaagacttgtatttccaagacaaagtttctattaatg 23070230  T
Q  299 aaatctttaactattgctcttaggacactggttagcaaga 338  Q
     |||  ||||| ||||  |||||| |||||||||||||||    
T  23070229 gaattcttaaccattgtccttagggcactggttagcaaga 23070190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 37889311 - 37889228
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  37889311 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37889228  T

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Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 37972448 - 37972365
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  37972448 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37972365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 20418891 - 20418973
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 20418973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 550 - 631
Target Start/End: Complemental strand, 48359707 - 48359627
Alignment:
Q  550 taattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  48359707 taattgcactttttcccc-tatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctat 48359627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 29292924 - 29293007
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  29292924 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctat 29293007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 48359322 - 48359404
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  48359322 cttaattgcactttt-ccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctat 48359404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 22740641 - 22740560
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  22740641 ttaattgcactttt-ccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctat 22740560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 167 - 275
Target Start/End: Complemental strand, 31245372 - 31245263
Alignment:
Q  167 ggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aag 265  Q
    ||||||||||||| || || | || |||||| ||| |||||||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||    
T  31245372 ggagaatgctaaccattgctcatggggcattggttgaagtactaaaataagtaagtttgcatcgaaaaatggtgtaattattgctaagacaaaagtgaag 31245273  T
Q  266 acttgtattt 275  Q
    ||||||||||    
T  31245272 acttgtattt 31245263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 29293403 - 29293315
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| |||||||||| |||| |||||||||||||  ||||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  29293403 tttggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctat 29293315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 37971962 - 37972045
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||  ||||| ||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  37971962 cttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37972045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 539 - 631
Target Start/End: Original strand, 3204662 - 3204752
Alignment:
Q  539 aaagtttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||| ||||||||||||||  |||||||||||||  ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  3204662 aaagattggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctat 3204752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 38826965 - 38826882
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| |||| ||||||||||||| |||||||||| |||||||||| |||||||| |||||| || |||||||||||||    
T  38826965 cttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctat 38826882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 192 - 337
Target Start/End: Complemental strand, 40019590 - 40019445
Alignment:
Q  192 ggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa-gacttgtattttcaagacaaagtttt 290  Q
    |||||| ||||||||| |||||| | ||| ||||||| ||||| |  |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  40019590 ggcattggttaaagtattaaaataaataagtttgcattgaaaagtgatgta-ttattgctaagaaaaaagtaaagacttgtatttccaagacaaagtttt 40019492  T
Q  291 cattattgaaatctttaactattgctcttaggacactggttagcaag 337  Q
     |||| || |||| ||||| |||||  ||| |||| |||||| ||||    
T  40019491 tattaatggaatccttaaccattgcatttaagacattggttaacaag 40019445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 9034869 - 9034953
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc-atagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||| |||  ||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||    
T  9034869 cttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctat 9034953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 194 - 289
Target Start/End: Original strand, 22680724 - 22680820
Alignment:
Q  194 cattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttt 289  Q
    |||| ||||||||||| |||| ||||| ||||||||||||| | ||||||| ||||||||||||||| | ||||||| |||||||||||||| ||||    
T  22680724 cattggttaaagtacttaaataagtaagtttgcatcgaaaagtggtgtaatgattgctaagaaaaaaataaagacttttattttcaagacaatgttt 22680820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 560 - 631
Target Start/End: Complemental strand, 18864442 - 18864371
Alignment:
Q  560 ttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||  ||||||||| |||||||||| |||||||| ||| |||||||||||||||||||    
T  18864442 ttttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctat 18864371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 42419079 - 42418997
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc-atagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| |||||||||||||  |||||||||  ||||||||||| ||||||| |||||||||||||||||||||||    
T  42419079 ttaattgcactttt-ccccctatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctat 42418997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 627
Target Start/End: Original strand, 36527387 - 36527464
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcccc 627  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||| | ||||| ||||    
T  36527387 ttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcaatttttcccc 36527464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 7833637 - 7833554
Alignment:
Q  199 gttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaaga 281  Q
    |||||||||||||||| | ||| |||||||  ||||||  |||||||||||||||||||||||| ||||||||||||| |||||    
T  7833637 gttaaagtactaaaataaataagtttgcataaaaaaatgatgtaattattgctaagaaaaaagtaaagacttgtatttccaaga 7833554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 36527850 - 36527767
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| |||| || | ||||||||  ||||| ||| |||||||| |||||||||| |||||||||||||||||||||||    
T  36527850 cttaattgcatttttccctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctat 36527767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 42418593 - 42418676
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||| ||||||| |||||||||||||   |||||||| |||||| | || ||||||| |||||||||||||||||||||||    
T  42418593 cttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctat 42418676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 623
Target Start/End: Complemental strand, 46816363 - 46816288
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttg 623  Q
    ||||||||||||||||||| ||||  |||| ||||| ||| ||||||||||||||| ||| |||||||||||||||    
T  46816363 cttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttg 46816288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 171 - 336
Target Start/End: Original strand, 25240250 - 25240416
Alignment:
Q  171 aatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagactt 269  Q
    ||||||||| || ||||||| | ||||  ||||||||| ||||| ||||| ||||||||||| | | ||||||| |||| |||||||||| | |||| ||    
T  25240250 aatgctaaccattgcccttgggacattgattaaagtacgaaaataagtaagtttgcatcgaacagtggtgtaatcattgataagaaaaaaataaagattt 25240349  T
Q  270 gtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaa 336  Q
    || ||| ||||||||| |||  |||| |  |||  ||||| ||||  ||||||||||||||||||||    
T  25240350 gtttttccaagacaaaatttctattaatagaattcttaaccattgtccttaggacactggttagcaa 25240416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 548 - 607
Target Start/End: Complemental strand, 16199029 - 16198970
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagttt 607  Q
    |||||||||||||||||||  ||||||||  ||||||||| |||||||||||||||||||    
T  16199029 cttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagttt 16198970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 44599486 - 44599567
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||| |||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  44599486 tttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 44599567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 44600187 - 44600111
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  44600187 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 44600111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 8643818 - 8643742
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||||||||   ||||||  |||| ||||||||| ||||||||||||||  | | ||||||||||||||||    
T  8643818 cttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttgc 8643742  T

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Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 624
Target Start/End: Original strand, 13863315 - 13863391
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||| ||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  13863315 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 13863391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 13864008 - 13863933
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||||||||  |||||||  |||  ||||||||| |||| |||||||||| ||| ||||||||||||||||    
T  13864008 cttaattgcacttttcacccctatcttttgccaattgtgcgattt-gcaccccatatttttaaacgagcgattttgc 13863933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 2256529 - 2256443
Alignment:
Q  203 aagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaagacttgtattttcaagacaaagttt 289  Q
    ||||| |||||| ||||| ||||||||||||| | ||||||| ||| |||||||||||  || ||||| ||||  |||||| |||||    
T  2256529 aagtattaaaataagtaagtttgcatcgaaaagtggtgtaatcattcctaagaaaaaataaatacttgcatttctaagacatagttt 2256443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 3338527 - 3338457
Alignment:
Q  239 tgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttttcattattgaaatctttaa 308  Q
    ||||||||||||||||| |||||| || | ||||||||||||||||| ||||| |||| || |||| ||||    
T  3338527 tgtaattattgctaagacaaaagtaaaaatttgtattttcaagacaatgtttttattaatggaatccttaa 3338457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 594
Target Start/End: Complemental strand, 5735603 - 5735553
Alignment:
Q  544 ttgacttaattgcactttttccccctatagtttatcaattgtgcaattttg 594  Q
    |||| |||||||||||||||||||||||  ||||| |||||||| ||||||    
T  5735603 ttgatttaattgcactttttccccctatcttttattaattgtgcgattttg 5735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 167 - 336
Target Start/End: Original strand, 32956494 - 32956664
Alignment:
Q  167 ggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaaga 266  Q
    ||||||||||||  |  |||||||||||||| |||||  |  ||||||  ||||||||||||| |||||| |||| |||||||  |||| |||||||| |    
T  32956494 ggagaatgctaatgagtgcccttgaggcattggttaagctgataaaattcgtaactttgcatcaaaaaatggtgtgattattggcaagacaaaagtaaaa 32956593  T
Q  267 -cttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaa 336  Q
      || ||||| ||||||| | |||  |||| || | |||||||| | |||  ||||| |||||||||||||    
T  32956594 gtttatatttccaagacagaatttctattagtggattctttaaccactgccgttagggcactggttagcaa 32956664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 3687708 - 3687656
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  |||  ||||||||| ||||||||||||    
T  3687708 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 3687656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 8953940 - 8953889
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  ||| | |||||||||||||||||||||    
T  8953940 cttaattgcactttt-ccccctatcttttgttaattgtgcaattttgcacccc 8953889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 9412377 - 9412325
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  |||  ||||||||| ||||||||||||    
T  9412377 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 9412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 8e-38; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 173 - 340
Target Start/End: Original strand, 37626694 - 37626862
Alignment:
Q  173 tgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgt 271  Q
    ||||||| || ||||||| |||||| |||||||||||||||| ||||| ||||||||||||| | |||| || |||| |||||||||||| |||||||||    
T  37626694 tgctaaccattgcccttggggcattggttaaagtactaaaataagtaagtttgcatcgaaaagtggtgtgatcattgataagaaaaaagtaaagacttgt 37626793  T
Q  272 attttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    |||| |||||||||||||  |||| ||||||| ||||| ||||| || |||||||| ||||||||||||    
T  37626794 atttccaagacaaagtttatattaatgaaatccttaaccattgccctcaggacactagttagcaagacc 37626862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 166 - 345
Target Start/End: Original strand, 33395304 - 33395484
Alignment:
Q  166 aggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aa 264  Q
    |||||||||||||| || ||| ||| | |||| ||||||||| |||||||||||| ||| |||| |||| | || ||||||||||||||||| |||| ||    
T  33395304 aggagaatgctaacaattgcctttgggacattggttaaagtattaaaatgagtaagtttacatcaaaaagtggtataattattgctaagaaataagtaaa 33395403  T
Q  265 gacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacctttaa 345  Q
    ||||||||||| ||||| ||||||| |||||||| |||| ||||| ||||| |||||| | ||| |||||||  |||||||    
T  33395404 gacttgtatttccaagataaagtttccattattggaatcattaaccattgcccttagggccctgattagcaacccctttaa 33395484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 548 - 627
Target Start/End: Complemental strand, 293269 - 293190
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcccc 627  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  293269 cttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccc 293190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 4239418 - 4239335
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  4239418 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 4239335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 39744517 - 39744434
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  39744517 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 39744434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 43292039 - 43292122
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  43292039 cttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 43292122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 169496 - 169408
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| |||||||||| |||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  169496 tttggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 169408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 32703707 - 32703619
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  32703707 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 32703619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 9023732 - 9023649
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  9023732 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 9023649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 25161880 - 25161963
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  25161880 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 25161963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 28196825 - 28196742
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  28196825 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 28196742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 39744032 - 39744115
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||    
T  39744032 cttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctat 39744115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 9380309 - 9380392
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  9380309 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctat 9380392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 9380793 - 9380710
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  9380793 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctat 9380710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 26207798 - 26207715
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| |||| |||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  26207798 cttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 26207715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 28196348 - 28196431
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||| |||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  28196348 cttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 28196431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 48405964 - 48406046
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  48405964 cttaattgcactttt-ccccctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctat 48406046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 548 - 630
Target Start/End: Original strand, 292784 - 292866
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcccccta 630  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  292784 cttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgcccccta 292866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 199 - 332
Target Start/End: Complemental strand, 41260114 - 41259980
Alignment:
Q  199 gttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa-gacttgtattttcaagacaaagttttcattatt 297  Q
    ||||||||| |||||| ||||| ||||||||||||| | ||||||| |||| ||| |||||| ||| |||||||||||||||||||||||||  |||| |    
T  41260114 gttaaagtattaaaataagtaagtttgcatcgaaaagtggtgtaatcattgataaaaaaaaaataaagacttgtattttcaagacaaagtttctattaat 41260015  T
Q  298 gaaatctttaactattgctcttaggacactggtta 332  Q
    | |||| ||||| ||||| |||||| |||||||||    
T  41260014 ggaatccttaaccattgcccttagggcactggtta 41259980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 53654262 - 53654388
Alignment:
Q  164 aaaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt- 262  Q
    |||||||||||||||| || | | ||  | |||| ||||||||| |||||| ||||  ||||||||||||||| ||||||||||||| |||||||||||     
T  53654262 aaaggagaatgctaaccattgtcattaggtcattggttaaagtattaaaataagtatgtttgcatcgaaaaatggtgtaattattgcgaagaaaaaagta 53654361  T
Q  263 aagacttgtattttcaagacaaagttt 289  Q
    ||||||||||||| |||||||||||||    
T  53654362 aagacttgtatttacaagacaaagttt 53654388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 169015 - 169099
Alignment:
Q  548 cttaattgcactttt-tccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||||  ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  169015 cttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctat 169099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 23539843 - 23539924
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||  |||||||||||||  ||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  23539843 cttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctat 23539924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 9023246 - 9023329
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||  ||||||||||||  ||||||||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  9023246 cttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctat 9023329  T

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Target: chr4; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 23540304 - 23540221
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||  |||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||    
T  23540304 cttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctat 23540221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 26207363 - 26207445
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||  |||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  26207363 cttaattgcactttc-ccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 26207445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 168 - 340
Target Start/End: Original strand, 11086241 - 11086417
Alignment:
Q  168 gagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaata----gtgtaattattgctaagaaaaaagta 263  Q
    |||||||||||| || ||||||| |||||| ||||||||| |||||| ||||| |||| ||  ||||| |    || ||| |||||||||||||||||||    
T  11086241 gagaatgctaaccattgcccttg-ggcattggttaaagtattaaaataagtaagtttgtataaaaaaaaattaggtataaatattgctaagaaaaaagta 11086339  T
Q  264 a-gacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    | || |||||||| ||||| ||||||   |||| ||||||| ||||| ||||| |||||| |||||||||||||||||    
T  11086340 aagatttgtatttccaagataaagttcctattaatgaaatccttaaccattgcccttagggcactggttagcaagacc 11086417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 32703227 - 32703310
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||| |||  ||||||||| ||| |||||||| |||||| |||||||||||||||||||||||    
T  32703227 cttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctat 32703310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 199 - 341
Target Start/End: Original strand, 35422421 - 35422564
Alignment:
Q  199 gttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagta-agacttgtattttcaagacaaagttttcattatt 297  Q
    ||||||||  |||||| ||||| |||||||  ||||||||||||||||||| ||||| |||||||   |||| ||||| |||  ||||||||| ||||      
T  35422421 gttaaagtgttaaaattagtaagtttgcattaaaaaatagtgtaattattgataagacaaaagtagttacttatatttccaatgcaaagtttttattaaa 35422520  T
Q  298 gaaatctttaactattgctcttaggacactggttagcaagacct 341  Q
    ||| |||||||| |||||||||||| |||| |||||||||||||    
T  35422521 gaattctttaaccattgctcttagggcactagttagcaagacct 35422564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 43292409 - 43292326
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| |||| |||||| ||||||  ||||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  43292409 cttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 43292326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 561 - 631
Target Start/End: Complemental strand, 44468962 - 44468892
Alignment:
Q  561 tttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||||  ||||||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  44468962 tttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 44468892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 199 - 336
Target Start/End: Complemental strand, 52838057 - 52837919
Alignment:
Q  199 gttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttttcattatt 297  Q
    ||||||||| |||||| ||||| ||||||||||||||| || ||||||||| |||||||||||| ||||| ||||||| ||| | || ||||  |||| |    
T  52838057 gttaaagtattaaaataagtaagtttgcatcgaaaaatggtataattattgttaagaaaaaagtaaagacatgtatttccaaaataatgtttctattaat 52837958  T
Q  298 gaaatctttaactattgctcttaggacactggttagcaa 336  Q
    |||||||||||| ||||| | || |||| ||| ||||||    
T  52837957 gaaatctttaaccattgcccatatgacagtggatagcaa 52837919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 194 - 289
Target Start/End: Original strand, 14124199 - 14124295
Alignment:
Q  194 cattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttt 289  Q
    |||| ||||||||| |||||| ||||| ||||||||||||||| |||||||| |||||||||||||||| || |||| ||||| ||| |||||||||    
T  14124199 cattggttaaagtattaaaataagtaaatttgcatcgaaaaatggtgtaatttttgctaagaaaaaagtaaaaacttatatttccaaaacaaagttt 14124295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 39086675 - 39086592
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||  ||| ||||||||  ||||||||| ||||||||||  ||||||| |||||||||||||||||||||||    
T  39086675 cttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctat 39086592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 561 - 631
Target Start/End: Complemental strand, 25162352 - 25162282
Alignment:
Q  561 tttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||| ||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||    
T  25162352 tttccccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctat 25162282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 39912543 - 39912456
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||| ||||||| ||  |||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||||| |||||    
T  39912543 tttggcttaattacactttt-ccttctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagtgattttgccacctat 39912456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 192 - 289
Target Start/End: Original strand, 37858199 - 37858298
Alignment:
Q  192 ggcattagttaaagtacta-aaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttt 289  Q
    |||||| |||||||||||| |||| || || ||||||||||||| |  | |||||||||||||||||||||| || |||||||||||||||| |||||||    
T  37858199 ggcattggttaaagtactataaataaggaagtttgcatcgaaaagtgatttaattattgctaagaaaaaagtaaaaacttgtattttcaagataaagttt 37858298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 203 - 345
Target Start/End: Original strand, 41163046 - 41163189
Alignment:
Q  203 aagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttttcattattgaaa 301  Q
    |||||||||||| ||| | ||| ||||||||| | ||||||||||||||||||||||||| || ||||||||||  |||||||  |||| |||| |  ||    
T  41163046 aagtactaaaataagttagtttacatcgaaaagtggtgtaattattgctaagaaaaaagtaaatacttgtatttctaagacaacatttttattaatagaa 41163145  T
Q  302 tctttaactattgctcttaggacactggttagcaagacctttaa 345  Q
    | |||||| ||||   ||||| ||||||||||||| ||| ||||    
T  41163146 tgtttaaccattgtctttagggcactggttagcaacacccttaa 41163189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 564 - 631
Target Start/End: Complemental strand, 48406421 - 48406354
Alignment:
Q  564 ccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||| |||  ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  48406421 ccccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 48406354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 16502556 - 16502386
Alignment:
Q  166 aggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaag 265  Q
    |||||||||||||  |  ||||||| |||||| |||||||||||||||| ||||||| |  | | |||| | |||||| |||||| |||| ||||  ||     
T  16502556 aggagaatgctaatgagtgcccttggggcattggttaaagtactaaaataagtaactctaaaacaaaaagttgtgtaaatattgccaagagaaaataaaa 16502457  T
Q  266 acttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaa 336  Q
    | |||||||| |||||||||||||  | || || | || ||||| ||||| |||||| |||||||||||||    
T  16502456 atttgtatttccaagacaaagtttctactaatggattccttaaccattgcccttagggcactggttagcaa 16502386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 388497 - 388392
Alignment:
Q  186 ccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaa-gt-aagacttgtattttcaagaca 283  Q
    ||||| |||||| |||||||||||||||| | ||| ||||||| |||||   ||| ||||||||| ||||||||| || ||||||| |||||||||||||    
T  388497 ccttggggcattggttaaagtactaaaataaataaatttgcatggaaaatgggtgcaattattgcgaagaaaaaatgtaaagacttatattttcaagaca 388398  T
Q  284 aagttt 289  Q
    ||||||    
T  388397 aagttt 388392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 311
Target Start/End: Complemental strand, 54335272 - 54335152
Alignment:
Q  192 ggcattagttaaagtactaaaatgagtaactttgcatcgaaaaa-tagtgtaattattgctaagaaaaaagtaa-gacttgtattttcaagacaaagttt 289  Q
    |||||| |||||||||||||||| ||||| |||||||  ||||| | ||| ||||||||| |||||| |||||| ||||||||||| ||||| ||| |||    
T  54335272 ggcattggttaaagtactaaaataagtaagtttgcataaaaaaagtggtgcaattattgc-aagaaacaagtaaagacttgtatttccaagataaaattt 54335174  T
Q  290 tcattattgaaatctttaacta 311  Q
      |||| |||||||||||||||    
T  54335173 ctattagtgaaatctttaacta 54335152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 200 - 295
Target Start/End: Original strand, 48497420 - 48497516
Alignment:
Q  200 ttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa-gacttgtattttcaagacaaagttttcatta 295  Q
    |||||||| |||||| | ||| |||| |||||||| | || |||| |||| |||||||||| ||| |||||||||||||||||||||||||| ||||    
T  48497420 ttaaagtattaaaataaataagtttgtatcgaaaagtggtataatcattgataagaaaaaaataaagacttgtattttcaagacaaagtttttatta 48497516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 568 - 631
Target Start/End: Original strand, 12757788 - 12757851
Alignment:
Q  568 ctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||| |||||||||| |||||||| | |||||||| ||||||||||||||| |||||||    
T  12757788 ctatagtttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttgtcccctat 12757851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 548 - 627
Target Start/End: Original strand, 39912056 - 39912134
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcccc 627  Q
    ||||||||||||||| | ||||||||||||| |||||||| ||||| ||  ||||||||| |||||| ||||||||||||    
T  39912056 cttaattgcacttttcctccctatagtttattaattgtgcgattttaca-tccatagttttaaacgaacgattttgcccc 39912134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 21865192 - 21865252
Alignment:
Q  199 gttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaa 259  Q
    ||||||||  |||||| ||||| ||||||||||||||| ||||||| ||||||||||||||    
T  21865192 gttaaagttttaaaataagtaagtttgcatcgaaaaatggtgtaatcattgctaagaaaaa 21865252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 21921053 - 21921113
Alignment:
Q  199 gttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaa 259  Q
    ||||||||  |||||| ||||| ||||||||||||||| ||||||| ||||||||||||||    
T  21921053 gttaaagttttaaaataagtaagtttgcatcgaaaaatggtgtaatcattgctaagaaaaa 21921113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Original strand, 50678781 - 50678857
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  50678781 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 50678857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 193 - 276
Target Start/End: Complemental strand, 35827870 - 35827787
Alignment:
Q  193 gcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaagacttgtatttt 276  Q
    ||||| |||||| || |||||| ||||| ||||| |||||||||  ||||||||||| |||||||||| ||| |||| ||||||    
T  35827870 gcattggttaaaatattaaaataagtaagtttgcttcgaaaaatgatgtaattattgttaagaaaaaaataaaacttttatttt 35827787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 36095819 - 36095902
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| ||||  |||||||  |||  ||||||||| ||||||||||||||  ||| |||||||||||||||| ||||||    
T  36095819 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccctat 36095902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 36096526 - 36096451
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    ||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 36096451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 48582187 - 48582231
Alignment:
Q  200 ttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaat 244  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||    
T  48582187 ttaaagtactaaaataagtaagtttgcatcgaaaaatggtgtaat 48582231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 50679476 - 50679400
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||||||||  |||||||  |||  ||||||| | ||||||||||||||  ||| ||||||||||||||||    
T  50679476 cttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttgc 50679400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 624
Target Start/End: Original strand, 56505695 - 56505771
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    ||||||||||||||| ||||||||  |||  ||||||||| ||||||||||||||| ||| ||  |||| |||||||    
T  56505695 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 56505771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 43050610 - 43050685
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    ||||||||||||||   ||||||  |||| ||||||||| ||||||||||||||  ||| ||||||| ||||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgattttgc 43050685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 12758254 - 12758173
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||  || ||||||||  ||||| ||   |||||||| ||||||||| |||||||| ||||||||||||||    
T  12758254 ttaattgcactttttttcc-tatagtttgccaattatgtgtttttgcacgccatagttttaaacgagcaattttgccccctat 12758173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 548 - 602
Target Start/End: Complemental strand, 24775835 - 24775781
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccat 602  Q
    ||||||||||||||| || |||||  ||| |||||||||| ||||||||||||||    
T  24775835 cttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcaccccat 24775781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 290
Target Start/End: Complemental strand, 47519356 - 47519251
Alignment:
Q  187 cttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt--aagacttgtattttcaagacaa 284  Q
    |||| |||||| ||||||||  |||||| ||||| |||||||  |||| | |||||||||||| ||| || ||| |  || |||| ||||||||||||||    
T  47519356 cttggggcattggttaaagtgttaaaattagtaagtttgcattaaaaagttgtgtaattattgataaaaacaaaattaaaaacttatattttcaagacaa 47519257  T
Q  285 agtttt 290  Q
    ||||||    
T  47519256 agtttt 47519251  T

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Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 13198958 - 13198906
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  ||| | |||||||| ||||||||||||    
T  13198958 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 13198906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 32906238 - 32906166
Alignment:
Q  188 ttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaa 260  Q
    ||||||||||  |||||||  |||||| ||||| |||||||  ||||||  ||||||||||||||||| ||||    
T  32906238 ttgaggcattgattaaagtgttaaaattagtaagtttgcattaaaaaatgttgtaattattgctaagacaaaa 32906166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 43051304 - 43051228
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||| ||||  |||||||  |||  ||||||||  ||||||||||||||  ||| ||||||||||||||||    
T  43051304 cttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttgc 43051228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 45830248 - 45830172
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||| ||||||||  |||||||  ||| |||||||||| ||||| ||||||||  ||| ||| ||||||||||||    
T  45830248 cttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacaccccatgtttttaaaagagcgattttgc 45830172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 48582248 - 48582316
Alignment:
Q  268 ttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaa 336  Q
    |||||||||||||| |||||||  |||| ||||||| ||||| ||||| |||| || ||| ||||||||    
T  48582248 ttgtattttcaagataaagtttctattaatgaaatccttaacaattgcacttaagatactagttagcaa 48582316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 175 - 340
Target Start/End: Original strand, 54153848 - 54154014
Alignment:
Q  175 ctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtat 273  Q
    ||||| || ||||||| |||||| |||||||||||||||| ||||| ||||||||||||| | || |||| |||| |||||||||||| |||||||||||    
T  54153848 ctaaccattgcccttggggcattggttaaagtactaaaataagtaagtttgcatcgaaaagtggtttaatcattgataagaaaaaagtaaagacttgtat 54153947  T
Q  274 tttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    || || ||||||||||| |||| || |||||||||| | ||| |||||| |||||||||||||||||    
T  54153948 ttccatgacaaagtttttattaatggaatctttaaccactgcccttagggcactggttagcaagacc 54154014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 47666387 - 47666304
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47666387 cttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctat 47666304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 53766166 - 53766248
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 53766248  T

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Target: chr3; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 200 - 336
Target Start/End: Complemental strand, 44765383 - 44765246
Alignment:
Q  200 ttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa-gacttgtattttcaagacaaagttttcattattg 298  Q
    |||||||| |||||| ||||| ||||||| ||||| | |||||||||||||||||||| |||||| ||||||||||| ||| ||||||||| ||||||||    
T  44765383 ttaaagtattaaaataagtaagtttgcattgaaaagtggtgtaattattgctaagaaataagtaaagacttgtatttccaaaacaaagtttccattattg 44765284  T
Q  299 aaatctttaactattgctcttaggacactggttagcaa 336  Q
     |||| ||||| | ||| |||||| |||||||||||||    
T  44765283 gaatccttaaccactgcccttagggcactggttagcaa 44765246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 42673352 - 42673265
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  42673352 tttggcttaattgcactttt-ccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 42673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 48159899 - 48159982
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  48159899 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48159982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 53687890 - 53687973
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  53687890 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctat 53687973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 336
Target Start/End: Complemental strand, 32375361 - 32375193
Alignment:
Q  170 gaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt--aagac 267  Q
    |||| ||||| || || |||| ||||||||||||||||||||||| ||||| || |||| ||||| | |||||||||||||||||||||||    || ||    
T  32375361 gaatactaaccattgctcttggggcattagttaaagtactaaaataagtaagttagcattgaaaagtggtgtaattattgctaagaaaaaaaataaatac 32375262  T
Q  268 ttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaa 336  Q
    ||| |||||||||||||| || | |||| || |||| ||||| ||||| |||||| |||||||||||||    
T  32375261 ttgaattttcaagacaaaattcttattaatggaatccttaaccattgcccttagggcactggttagcaa 32375193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 10348856 - 10348768
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| |||||||||||||||||| | ||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  10348856 tttggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 10348768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 48160390 - 48160302
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||  |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  48160390 tttggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48160302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 544 - 631
Target Start/End: Complemental strand, 22429651 - 22429565
Alignment:
Q  544 ttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||||||  || |||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  22429651 ttgacttaattgcactttc-cctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 22429565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 538 - 631
Target Start/End: Original strand, 44007959 - 44008052
Alignment:
Q  538 aaaagtttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||| ||||||||||||||| | ||||||||||| |||||||||||| |||||| |  ||||||| |||||||||||||||||||||||    
T  44007959 aaaagtttggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctat 44008052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 165 - 340
Target Start/End: Original strand, 47510715 - 47510891
Alignment:
Q  165 aaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaag-aaaaaagta 263  Q
    ||||||||||||||| ||  || ||| ||||||  ||||||||||||||| ||||| |||| |||||||||| |||||||||||| |||| ||||||  |    
T  47510715 aaggagaatgctaaccattacctttggggcattgattaaagtactaaaataagtaagtttgtatcgaaaaatggtgtaattattgttaagaaaaaaacaa 47510814  T
Q  264 agacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    ||| |||||||| ||||||| |||||  |||| || |||| | ||  |||||  ||||| |||||||||||||||||    
T  47510815 agatttgtatttccaagacatagtttctattaatggaatcatcaatcattgcctttagggcactggttagcaagacc 47510891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 53688359 - 53688272
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| |||||||||||||| ||||| ||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  53688359 tttggcttaattgcactttctcccc-tatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctat 53688272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 26007184 - 26007266
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| |||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  26007184 cttaattgca-ttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctat 26007266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 40848523 - 40848605
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  40848523 cttaattgcactttt-ccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 40848605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 40849013 - 40848930
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||| |||||||||  ||||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  40849013 cttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctat 40848930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 42672980 - 42673062
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  42672980 cttaattgcactttt-ccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctat 42673062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 543 - 621
Target Start/End: Original strand, 3353125 - 3353202
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattt 621  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  3353125 tttggcttaattgcactttt-ccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt 3353202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 27238951 - 27238869
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| ||| |||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctat 27238869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 167 - 338
Target Start/End: Complemental strand, 4195473 - 4195301
Alignment:
Q  167 ggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaa-aaaagt-aa 264  Q
    ||||||||||||| || || |||| |||||| |||||||||||||||| ||||| |||||||  |||||| |||||||| |||||||||| |||||| ||    
T  4195473 ggagaatgctaaccattgctcttggggcattggttaaagtactaaaataagtaagtttgcataaaaaaatggtgtaatt-ttgctaagaagaaaagtaaa 4195375  T
Q  265 gacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaaga 338  Q
    || |||||||| ||| ||||| ||   |||| || |||| ||||| ||||| |||| | |||||||||||||||    
T  4195374 gaattgtatttccaaaacaaaattactattaatggaatccttaaccattgcccttaaggcactggttagcaaga 4195301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 24485516 - 24485429
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| | |||||||||||  ||||||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  24485516 tttggcttaattgcactttt-ctccctatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 24485429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 631
Target Start/End: Complemental strand, 3353591 - 3353520
Alignment:
Q  560 ttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||  ||||||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  3353591 ttttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 3353520  T

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Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 187 - 333
Target Start/End: Original strand, 3432602 - 3432749
Alignment:
Q  187 cttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaa 285  Q
    ||||||| ||| |||||||||||||||| | ||| |||||||| ||||||  |||||||||||||||||| ||||| || |||| ||||||||||| |||    
T  3432602 cttgaggtattggttaaagtactaaaataaataagtttgcatcaaaaaatgatgtaattattgctaagaacaaagtaaacacttatattttcaagataaa 3432701  T
Q  286 gttttcattattgaaatctttaactattgctcttaggacactggttag 333  Q
    ||||  |||| || |||| ||||| ||||  |||| ||||||| ||||    
T  3432702 gtttctattaatggaatcattaaccattgtccttaagacactgcttag 3432749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 27238467 - 27238550
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||| |||||| || ||||||||||  ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  27238467 cttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 27238550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 47665913 - 47665996
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||||| |||||||| |||||||||| |||||||||| ||| |||||||||||| |||||| || |||||    
T  47665913 cttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgattttaccacctat 47665996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 26007670 - 26007588
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||||||||||||||||  ||||||| | |||||||||  |||| ||| |||||||||||||||||||||||    
T  26007670 ttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctat 26007588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 42456250 - 42456164
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||  ||||||| ||||   ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  42456250 tttggcttaattgcacttt--ccccctaaagttccccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 42456164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 559 - 631
Target Start/End: Original strand, 24485034 - 24485106
Alignment:
Q  559 tttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||| ||||||||||  ||||||||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  24485034 tttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctat 24485106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 36180558 - 36180639
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||| |||  |||||||||||| |||||||||| |||||||| |||||||||| ||||||||||||||| |||||||    
T  36180558 cttaattgcacattt--cccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctat 36180639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 10348481 - 10348564
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||  ||| |||||||| |||||||| |||||||||| |||||| ||| ||||||||||||||| |||||||    
T  10348481 cttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctat 10348564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 36181042 - 36180959
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| | ||||||||||| | |||||||| |||||| |||||||||||| ||||||||||||||  |||||||    
T  36181042 cttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgattttttcccctat 36180959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 192 - 321
Target Start/End: Original strand, 42005344 - 42005474
Alignment:
Q  192 ggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagtttt 290  Q
    |||||| |||||||||||| ||| ||||| |||||||| |||||| || ||||||||| |||||||||||| |||| |||||||||||| | ||| |||     
T  42005344 ggcattggttaaagtactacaataagtaagtttgcatctaaaaatggtctaattattgttaagaaaaaagtaaagatttgtattttcaatataaaatttc 42005443  T
Q  291 cattattgaaatctttaactattgctcttag 321  Q
     |||| || |||| ||||| ||||| |||||    
T  42005444 tattaatggaatccttaaccattgcccttag 42005474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 44008457 - 44008370
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |  ||||||||||  |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||    
T  44008457 tttggcttaattgcactttt-catcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctat 44008370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 22429160 - 22429243
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||  |||||||| |||  ||||||||| | ||||||||| ||||||| ||||||||||||||| |||||||    
T  22429160 cttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctat 22429243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 21896562 - 21896487
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||| ||||||||| |||| ||| |||||||||| |||||||||||||| |||| | ||||||||||||||    
T  21896562 cttaattgcattttttcccc-tatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgc 21896487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 8314015 - 8314098
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||  |||||||| ||| |||||||||| ||||||||||| ||  ||| ||||| |||||||||| ||||||    
T  8314015 cttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctat 8314098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 548 - 607
Target Start/End: Original strand, 42455792 - 42455851
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagttt 607  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||| ||| |||||||    
T  42455792 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgccccctatagttt 42455851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 548 - 607
Target Start/End: Complemental strand, 53766631 - 53766572
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagttt 607  Q
    ||||||||||||||| |||||||||||||   |||||||||||||||||||| |||||||    
T  53766631 cttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttt 53766572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 342
Target Start/End: Complemental strand, 51313015 - 51312857
Alignment:
Q  185 cccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaaga-cttgtattttcaagaca 283  Q
    ||||||| ||||| ||||| ||  |||||| ||||| |||||||| |||| | || | |||||| | |||| |||| ||| | ||| ||||||||||| |    
T  51313015 cccttgaagcattggttaatgtgttaaaattagtaagtttgcatcaaaaagtggtatgattattaccaagacaaaaataaaagcttatattttcaagata 51312916  T
Q  284 aagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacctt 342  Q
    || |||  |||| || | || ||||||||||| ||||||||||| ||||||||||||||    
T  51312915 aaatttatattagtggattccttaactattgcccttaggacactagttagcaagacctt 51312857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 25118694 - 25118636
Alignment:
Q  206 tactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa 264  Q
    ||||||||| ||||| ||||||| ||||| | ||||||| |||||||||||||||||||    
T  25118694 tactaaaataagtaagtttgcattgaaaagtggtgtaatcattgctaagaaaaaagtaa 25118636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 20137715 - 20137620
Alignment:
Q  167 ggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa 264  Q
    |||||||||||||||  ||||||| | |||| |||| ||||||||||| |||||||||||| | |||||| | ||||||||||  |||| ||||||||    
T  20137715 ggagaatgctaactagtgcccttgggacattggttagagtactaaaataagtaactttgcaac-aaaaattg-gtaattattgtcaagacaaaagtaa 20137620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 600
Target Start/End: Complemental strand, 20969079 - 20969019
Alignment:
Q  540 aagtttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||| ||||||||||||||| ||||||||  |||  ||||||||| ||||||||||||    
T  20969079 aagtttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20969019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 9248375 - 9248464
Alignment:
Q  171 aatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaa 260  Q
    ||||||||| ||  || ||| |||||| ||||||||| |||||| | ||| ||||||||||||| | || |||| |||| ||||||||||    
T  9248375 aatgctaaccattacctttggggcattggttaaagtattaaaataaataagtttgcatcgaaaagtggtataatcattgataagaaaaaa 9248464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 600
Target Start/End: Complemental strand, 10293966 - 10293909
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    |||| ||||||||||||||| ||||||||  ||| | |||||||| ||||||||||||    
T  10293966 tttggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 10293909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 23278010 - 23278105
Alignment:
Q  167 ggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa 264  Q
    |||||||||||||||  ||||||||| |||| |||| ||||||||||| |  ||||||||| | |||||| | ||||||||||  |||| ||||||||    
T  23278010 ggagaatgctaactagtgcccttgagacattggttagagtactaaaataaacaactttgcaac-aaaaattg-gtaattattgtcaagacaaaagtaa 23278105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 631
Target Start/End: Complemental strand, 1928455 - 1928403
Alignment:
Q  579 caattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||| ||||||||||||||| ||| ||||||| | |||||| ||||||    
T  1928455 caattgtgcgattttgcaccccatatttttaaacgagtggttttgcaccctat 1928403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Original strand, 10293610 - 10293662
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    |||||||||| ||||| |||||||  ||| |||||||||| ||||||||||||    
T  10293610 cttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcacccc 10293662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 167 - 309
Target Start/End: Complemental strand, 246656 - 246513
Alignment:
Q  167 ggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aag 265  Q
    ||||||||||||| || ||||||  ||||||||||||||||||||||| ||||| ||||||||||||| | |||||||||||||| |||||||||| ||     
T  246656 ggagaatgctaaccattgcccttagggcattagttaaagtactaaaataagtaagtttgcatcgaaaagtggtgtaattattgctcagaaaaaagtaaaa 246557  T
Q  266 acttgtattttcaagacaaagttttcattattgaaatctttaac 309  Q
    |||||||||||||||||||| |||| |||| |  ||||||||||    
T  246556 acttgtattttcaagacaaattttttattagtagaatctttaac 246513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 8e-35; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 164 - 290
Target Start/End: Complemental strand, 8772546 - 8772419
Alignment:
Q  164 aaaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt- 262  Q
    |||| ||||||||||| || ||||||| |||||| |||||||||||||||| ||||| ||||||||||||| | ||||||||||||| |||| ||||||     
T  8772546 aaagaagaatgctaaccattgcccttggggcattggttaaagtactaaaataagtaaatttgcatcgaaaagtggtgtaattattgccaagacaaaagta 8772447  T
Q  263 aagacttgtattttcaagacaaagtttt 290  Q
    ||||||||||||||||||||||||||||    
T  8772446 aagacttgtattttcaagacaaagtttt 8772419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 26815171 - 26815088
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  26815171 cttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 184 - 340
Target Start/End: Original strand, 12188622 - 12188779
Alignment:
Q  184 gcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagac 282  Q
    ||||||| |||||| | |||||||||||||| ||||| |||| || ||||||| ||||||||||||||||||||||||| || | |||||||| ||||||    
T  12188622 gcccttggggcattggataaagtactaaaataagtaattttgtattgaaaaatggtgtaattattgctaagaaaaaagtaaaaatttgtatttccaagac 12188721  T
Q  283 aaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    |||||||  |||| || |||| ||||| |||||||||||| ||||  |||||||||||    
T  12188722 aaagtttctattaatggaatccttaacgattgctcttagggcactaattagcaagacc 12188779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 542 - 631
Target Start/End: Original strand, 21687021 - 21687110
Alignment:
Q  542 gtttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||| ||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  21687021 gtttggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctat 21687110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 161 - 345
Target Start/End: Complemental strand, 26701677 - 26701492
Alignment:
Q  161 aaaaaaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaa 260  Q
    |||||||||||||| |||| || | | ||| | |||| ||||||||||| |||| ||||| ||||||||||||| |  |||||| |||| ||||||||||    
T  26701677 aaaaaaggagaatgttaaccattgtcattgtgacattggttaaagtacttaaataagtaagtttgcatcgaaaagtgatgtaatgattgataagaaaaaa 26701578  T
Q  261 gt-aagacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacctttaa 345  Q
    || |||| |||||||||||||| |||||||  |||| ||| || |||||| ||||| ||||||||| |||||||||||||| ||||    
T  26701577 gtaaagatttgtattttcaagagaaagtttctattaatgagatttttaaccattgcccttaggacaatggttagcaagacccttaa 26701492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 547 - 631
Target Start/End: Complemental strand, 50526525 - 50526441
Alignment:
Q  547 acttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  50526525 acttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 50526441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 46824330 - 46824247
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  46824330 cttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctat 46824247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 9347123 - 9347211
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  9347123 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 9347211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 13918443 - 13918531
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| |||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  13918443 tttggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 13918531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 26814691 - 26814779
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  26814691 tttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26814779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 4692485 - 4692402
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||| || |||||    
T  4692485 cttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttacctcctat 4692402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 6703462 - 6703545
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  6703462 cttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 6703545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 20480170 - 20480252
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  20480170 cttaattgcactttt-ccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 20480252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 548 - 629
Target Start/End: Original strand, 20371042 - 20371121
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccct 629  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20371042 cttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccct 20371121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 28634208 - 28634126
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctat 28634126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 48104681 - 48104763
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48104763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 50430132 - 50430050
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 50430050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 27172113 - 27172200
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  27172113 tttggcttaattgcactttt-ccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 27172200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 48105173 - 48105085
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |||| ||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  48105173 tttggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48105085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 50615677 - 50615590
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  50615677 tttggcttaattgcactttt-ccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 50615590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 50623505 - 50623418
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  50623505 tttggcttaattgcactttt-ccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 50623418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 9347602 - 9347520
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9347602 cttaattgcactttc-ccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctat 9347520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 19008802 - 19008719
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||||||||| || ||||||||||||||    
T  19008802 cttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctat 19008719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 627
Target Start/End: Complemental strand, 32163095 - 32163016
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcccc 627  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  32163095 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccc 32163016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 999115 - 999196
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| ||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  999115 ttaattgcactttt-ccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 999196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 44911488 - 44911406
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||| ||||||||||||||||||  ||||||||| ||||||||||| || ||||||||||||||||||||||||||||    
T  44911488 ttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctat 44911406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 46823846 - 46823928
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| |||||||||||||  ||||||||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctat 46823928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 548 - 625
Target Start/End: Complemental strand, 6703946 - 6703869
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcc 625  Q
    |||||||||||||||  ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  6703946 cttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgcc 6703869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 49318222 - 49318135
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||  |||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  49318222 tttggcttaattgcactttc-ccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctat 49318135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 49318499 - 49318412
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||  |||||||    
T  49318499 tttggcttaattgca-tttttccccctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgattttatcccctat 49318412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 28633722 - 28633805
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||| ||||||||  ||||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  28633722 cttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctat 28633805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 44911027 - 44911110
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||  ||||||||| |||  ||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  44911027 cttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 44911110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 49317754 - 49317836
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  49317754 cttaattgcactttt-ccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctat 49317836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 171 - 340
Target Start/End: Complemental strand, 2193407 - 2193237
Alignment:
Q  171 aatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagactt 269  Q
    |||| |||| || ||||||| |||||| ||||||||| |||||| ||||| ||| ||||||||| | ||||||| |||| |||||||||||| |||| ||    
T  2193407 aatgttaaccattgcccttgtggcattggttaaagtattaaaataagtaaatttacatcgaaaagtggtgtaatcattgataagaaaaaagtaaagattt 2193308  T
Q  270 gtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
     ||||||||||| |||||||  |||| |  |||| |||||||||| ||||||| || || ||| |||||||    
T  2193307 atattttcaagataaagtttctattaatagaatccttaactattgttcttagggcattgattaacaagacc 2193237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 42611665 - 42611583
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||  |||||||||||| |||||||||| |||||||||| |||||||| |||| ||||||||||||||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctat 42611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 200 - 340
Target Start/End: Original strand, 44603632 - 44603773
Alignment:
Q  200 ttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa-gacttgtattttcaagacaaagttttcattattg 298  Q
    |||||||||| |||| ||||| ||||| || |||| | ||||||| ||||||||||||||| ||| || ||||| ||||||||||||||||  |||| ||    
T  44603632 ttaaagtacttaaataagtaagtttgcctcaaaaagtggtgtaatgattgctaagaaaaaaataaagatttgtactttcaagacaaagtttatattaatg 44603731  T
Q  299 aaatctttaactattgctcttaggacactggttagcaagacc 340  Q
      ||| ||||| ||||| |||||| |||||||||||||||||    
T  44603732 ggatccttaaccattgcccttagggcactggttagcaagacc 44603773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 550 - 631
Target Start/End: Complemental strand, 50949615 - 50949534
Alignment:
Q  550 taattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||  ||||||||||||| |||||||||| |||||||| | ||| ||||||||||||||||||||||||||||    
T  50949615 taattgcactttccccccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccctat 50949534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 999576 - 999494
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||| ||  ||||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  999576 cttaattgcactttt-ccccctatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctat 999494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 13918919 - 13918836
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| | |||||||||||  ||||||||| |||||||||| |||||||| |||||| ||||||||||||||||    
T  13918919 cttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccctat 13918836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 42611188 - 42611270
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| |||| ||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||| |||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgcctcctat 42611270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 20371409 - 20371321
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgca-ccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||    
T  20371409 tttggcttaattgcactttt-ccccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctat 20371321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 47498298 - 47498384
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||  |||||||||||||  |||||||||||||||||| |||||||||| |||| ||||||||||||| ||||    
T  47498298 tttggcttaattgcacttt--ccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttgccctctat 47498384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 543 - 621
Target Start/End: Complemental strand, 20480668 - 20480591
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattt 621  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||| ||||||||||| ||||||| |||||||||||||    
T  20480668 tttggcttaattgcactttt-ccccctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt 20480591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 193 - 340
Target Start/End: Complemental strand, 4449127 - 4448978
Alignment:
Q  193 gcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaag-aaaaaagtaagacttgtattttcaagac-aaagtttt 290  Q
    ||||| |||||||||||||||| | ||  |||| || ||||||| |||||||||||| |||| |||||| ||| ||||||||||  ||||| |||||||     
T  4449127 gcattggttaaagtactaaaataaataggtttgtattgaaaaatggtgtaattattgttaagaaaaaaattaaaacttgtatttctaagacaaaagtttc 4449028  T
Q  291 cattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
      ||| || |||| ||||| ||||| ||||||||| ||||||||||||||    
T  4449027 tgttaatggaatccttaaccattgcccttaggacattggttagcaagacc 4448978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 15330851 - 15330940
Alignment:
Q  201 taaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaagacttgtattttcaagacaaagtttt 290  Q
    ||||||| |||||| || || ||||||||||||||| ||||||||||||||||||||||   |||| ||||||||||  |||||||||||    
T  15330851 taaagtattaaaataagaaagtttgcatcgaaaaattgtgtaattattgctaagaaaaagtaaagatttgtattttcgtgacaaagtttt 15330940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 551 - 616
Target Start/End: Original strand, 32162734 - 32162799
Alignment:
Q  551 aattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagc 616  Q
    ||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  32162734 aattgcactttttcttcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagc 32162799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 627
Target Start/End: Complemental strand, 27172593 - 27172514
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcccc 627  Q
    ||||||||||||||| |||||| || |||  ||||||||| |||||||| ||||| |||| |||||||||||||||||||    
T  27172593 cttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttgcccc 27172514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 39692052 - 39691969
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||  ||| ||||| | |||||||| ||||||    
T  39692052 cttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctat 39691969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 42723893 - 42724065
Alignment:
Q  158 tttaaaaaaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaag-aa 256  Q
    ||||||||||||||||| |||  || |||||||  ||||| |||||| ||||||||| | ||| |||||| | ||||| | ||||||||||| |||| ||    
T  42723893 tttaaaaaaggagaatgttaatcattgcccttggagcattggttaaattactaaaataaataagtttgcaccaaaaaaga-tgtaattattgttaagaaa 42723991  T
Q  257 aaaagta---agacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacact 327  Q
    |||||||   |||| |||||||  ||||||||||||  |||| || |||| ||||| ||||| |||| ||||||    
T  42723992 aaaagtaaagagacgtgtatttcaaagacaaagtttctattaatggaatccttaaccattgcccttaagacact 42724065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 580 - 631
Target Start/End: Original strand, 50429690 - 50429741
Alignment:
Q  580 aattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  50429690 aattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 50429741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 44224169 - 44224088
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||  |||| | ||||||| ||||||||  |||||||| |||||||||| ||||||||||||||| |||||||    
T  44224169 ttaattgcactttg-ccccatgtagtttaccaattgtgtgattttgcatcccatagttttaaacgagcgattttgtcccctat 44224088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 6002234 - 6002315
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||| |||||||||||||||  |||||||  ||| |||||||||  ||||||||||||||  ||| ||||||||||||||||    
T  6002234 tttggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttgc 6002315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 50949164 - 50949237
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgatttt 622  Q
    ||||||| |||||| || |||||||| |  ||||||||| |||||||||| ||| |||||||||||||||||||    
T  50949164 ttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgatttt 50949237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 536 - 600
Target Start/End: Complemental strand, 17518665 - 17518602
Alignment:
Q  536 ataaaagtttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||||||||||| ||||||||||||  |||  ||||||||| ||||||||||||    
T  17518665 ataaaagtttgacttaattgcac-ttttccccctatcttttgccaattgtgcgattttgcacccc 17518602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Original strand, 49284411 - 49284487
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  49284411 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 49284487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 600
Target Start/End: Original strand, 1176839 - 1176890
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    |||||||||||||| ||||||||  ||| |||||||||||||||||||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcacccc 1176890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 4692024 - 4692106
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| ||| | ||||||||   |||||| | |||||||| || |||||||||||||||| ||||||||||||||    
T  4692024 cttaattgcactttctcctc-tatagtttgctaattgtacgattttgcatcctatagtttaaaacgagccattttgccccctat 4692106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 288
Target Start/End: Original strand, 7330541 - 7330636
Alignment:
Q  194 cattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaag-taagacttgtattttcaagacaaagtt 288  Q
    |||| |||||||||||||||| |||||   ||||| ||||| |  || ||||||||||||||||||||  || |||||||||||||||| ||||||    
T  7330541 cattggttaaagtactaaaataagtaagcatgcattgaaaagtgatgcaattattgctaagaaaaaagcaaatacttgtattttcaagataaagtt 7330636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 548 - 595
Target Start/End: Original strand, 50615242 - 50615289
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgc 595  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  50615242 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 548 - 595
Target Start/End: Original strand, 50623070 - 50623117
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgc 595  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  50623070 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 560 - 622
Target Start/End: Complemental strand, 21687507 - 21687445
Alignment:
Q  560 ttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgatttt 622  Q
    ||||||||||||| |||  ||||||||| |||||| ||| |||||||| ||||||||||||||    
T  21687507 ttttccccctataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttt 21687445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 548 - 602
Target Start/End: Complemental strand, 47498546 - 47498493
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccat 602  Q
    ||||||||||||||| ||||||||||||| ||||||||||  |||||||||||||    
T  47498546 cttaattgcactttt-ccccctatagtttgtcaattgtgcggttttgcaccccat 47498493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 547 - 624
Target Start/End: Complemental strand, 6002947 - 6002870
Alignment:
Q  547 acttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    ||||||||||||||||   ||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  6002947 acttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 6002870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 47955660 - 47955608
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  ||||| |||||||| ||||||||||||    
T  47955660 cttaattgcacttttcccccctatcttttattaattgtgcgattttgcacccc 47955608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 336
Target Start/End: Original strand, 3895573 - 3895688
Alignment:
Q  222 tttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttttcattattgaaatctttaactattgctctta 320  Q
    ||||||||||||||| || |||| |||| |||||||||| | ||| ||| |||||| |||| ||| |||  |||| ||||||  ||||| |||||| |||    
T  3895573 tttgcatcgaaaaatcgtataatcattgataagaaaaaaataaagtcttatatttttaagataaaatttctattaatgaaattcttaacaattgctttta 3895672  T
Q  321 ggacactggttagcaa 336  Q
    | |||| |||||||||    
T  3895673 gaacaccggttagcaa 3895688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 548 - 602
Target Start/End: Complemental strand, 8109045 - 8108991
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccat 602  Q
    ||||||||||||||| ||||||||  |||  ||||||||| ||||||||||||||    
T  8109045 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccat 8108991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Original strand, 47955308 - 47955360
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  |||  ||||||||| ||||||||||||    
T  47955308 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 47955360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 7664250 - 7664333
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  7664250 cttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 7664333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 161 - 289
Target Start/End: Complemental strand, 31915194 - 31915065
Alignment:
Q  161 aaaaaaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaa 260  Q
    |||||||||||||| |||| || | ||||| |||||| ||||||||| |||||| ||||| ||||||||||||| | ||||||||||| ||| |||||||    
T  31915194 aaaaaaggagaatggtaaccattgtccttggggcattggttaaagtattaaaataagtaagtttgcatcgaaaagtggtgtaattatttctatgaaaaaa 31915095  T
Q  261 gt-aagacttgtattttcaagacaaagttt 289  Q
    || |||||||||||||||||||||||||||    
T  31915094 gtaaagacttgtattttcaagacaaagttt 31915065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 8851634 - 8851551
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  8851634 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 8851551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 170 - 308
Target Start/End: Complemental strand, 8033410 - 8033273
Alignment:
Q  170 gaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaagactt 269  Q
    |||||||||| || ||||||| |||||| ||||||||| |||||| ||||| ||||||||||||| | |||||||||||| ||| |||||||||| ||||    
T  8033410 gaatgctaaccattgcccttggggcattggttaaagtattaaaataagtaaatttgcatcgaaaagtggtgtaattattgataa-aaaaaagtaaaactt 8033312  T
Q  270 gtattttcaagacaaagttttcattattgaaatctttaa 308  Q
    |||||||||||| |||||||  |||| ||||||| ||||    
T  8033311 gtattttcaagataaagtttctattaatgaaatccttaa 8033273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 7664730 - 7664642
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  7664730 tttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 7664642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 5380011 - 5379928
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  5380011 cttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctat 5379928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 8851151 - 8851233
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 8851233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 26692399 - 26692481
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctat 26692481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 166 - 340
Target Start/End: Original strand, 31921207 - 31921380
Alignment:
Q  166 aggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaag 265  Q
    ||||||||| |||| || ||||||  |||||| ||||||||||| |||| ||||| ||||| ||||||| | ||||||| |||||||||||||||  ||     
T  31921207 aggagaatgttaaccattgcccttagggcattggttaaagtacttaaataagtaagtttgcctcgaaaagtggtgtaatgattgctaagaaaaaataaat 31921306  T
Q  266 acttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    ||||||||||||||||||||||||  |||| ||  ||| ||||| ||| | |||| |||| ||||||||||||||    
T  31921307 acttgtattttcaagacaaagtttctattaatgggatcattaaccattac-cttatgacaatggttagcaagacc 31921380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 41790494 - 41790575
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  41790494 ttaattgca-tttttccccctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 41790575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 5378663 - 5378746
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  ||||||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  5378663 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctat 5378746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 627
Target Start/End: Original strand, 37720206 - 37720285
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcccc 627  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  37720206 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccc 37720285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 26692871 - 26692789
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| ||| |||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26692789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 548 - 629
Target Start/End: Complemental strand, 18750177 - 18750097
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccct 629  Q
    ||||||||||||| | ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  18750177 cttaattgcacttct-ccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 18750097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 546 - 631
Target Start/End: Original strand, 19141444 - 19141528
Alignment:
Q  546 gacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||    
T  19141444 gacttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcgaatttaccccctat 19141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 17850975 - 17851062
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  17850975 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttt-taacgagcgattttgccccctat 17851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 19141898 - 19141818
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||  |||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  19141898 ttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctat 19141818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 41790964 - 41790881
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||| |||  ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||    
T  41790964 cttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctat 41790881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 546 - 631
Target Start/End: Complemental strand, 6325401 - 6325316
Alignment:
Q  546 gacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||||| |||| ||||||||  ||||||||| |||||||||| |||||| | |||||||||||||||||||||||    
T  6325401 gacttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctat 6325316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 16910829 - 16910912
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||| | ||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  16910829 cttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctat 16910912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 35005209 - 35005288
Alignment:
Q  185 cccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa 264  Q
    |||||| |||||| |||||||||||||||| ||||| ||||||||||||| | ||||||| |||||||||||||||||||    
T  35005209 cccttggggcattggttaaagtactaaaataagtaagtttgcatcgaaaagtggtgtaatcattgctaagaaaaaagtaa 35005288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 553 - 631
Target Start/End: Original strand, 6324924 - 6325002
Alignment:
Q  553 ttgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| |||||||||||||  ||||||||| |||||||| |||||||||| ||||||||||||||| |||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctat 6325002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 12800775 - 12800876
Alignment:
Q  188 ttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaagacttgtattttcaagacaaagt 287  Q
    |||||||||| ||||||||| ||| || ||||| |||| |||||||| | || ||||||||| |||||||||||||| | || |||||||||||||||||    
T  12800775 ttgaggcattggttaaagtattaagataagtaaatttgtatcgaaaattggtctaattattgttaagaaaaaagtaaaatttatattttcaagacaaagt 12800874  T
Q  288 tt 289  Q
    ||    
T  12800875 tt 12800876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 38373452 - 38373355
Alignment:
Q  193 gcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttt 289  Q
    ||||| |||||| || |||||| ||||| ||||||||||||||| |||||||||||||||||| |||||| || |||||||||| ||||| |||||||    
T  38373452 gcattggttaaaatattaaaataagtaaatttgcatcgaaaaatggtgtaattattgctaagataaaagtaaaaacttgtatttccaagataaagttt 38373355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 552 - 631
Target Start/End: Original strand, 7979573 - 7979650
Alignment:
Q  552 attgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||  ||| ||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  7979573 attgcactttt--cccttatagtttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 7979650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 16911320 - 16911238
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||  |||| ||||||||  ||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  16911320 cttaattgcactttcgcccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctat 16911238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 17851454 - 17851371
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||| |   ||||||||  ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  17851454 cttaattgcacttttttcttttatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 17851371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 5793450 - 5793532
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| |||| | ||||||  ||||||||| |||||||| || ||||||| |||||||||||||||||||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctat 5793532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 7980054 - 7979972
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||| | ||||||||   |||||||| ||||||||||||||||||| ||||||||||||| ||| |||||    
T  7980054 cttaattgcactttttcctc-tatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccgcctat 7979972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 186 - 340
Target Start/End: Complemental strand, 31598162 - 31598006
Alignment:
Q  186 ccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaag--aaaaaagt-aagacttgtattttcaagac 282  Q
    ||||||| |||| |||||| ||||||||| ||||| ||||||||| ||| | || ||||||||||||||  |||||||| |||| ||| |||| ||||||    
T  31598162 ccttgagacattggttaaaatactaaaataagtaagtttgcatcg-aaagtggtataattattgctaagaaaaaaaagtaaagatttgaatttccaagac 31598064  T
Q  283 aaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    |||||||  |||| || |||| ||||||||||  ||||||  | || |||||||||||    
T  31598063 aaagtttctattaatggaatccttaactattgtccttagggtattgattagcaagacc 31598006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 193 - 336
Target Start/End: Complemental strand, 16209934 - 16209790
Alignment:
Q  193 gcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttttc 291  Q
    ||||| |||||||||||||||| |||||||||  | | |||| | |||||| ||||||||||| |||||| || |||||||||| ||| |||||||||      
T  16209934 gcattggttaaagtactaaaataagtaactttaaaacaaaaagttgtgtaactattgctaagacaaaagtaaacacttgtatttccaaaacaaagtttct 16209835  T
Q  292 attattgaaatctttaactattgctcttaggacactggttagcaa 336  Q
    | ||||| | |  ||||| ||||| |||| ||||||| |||||||    
T  16209834 actattggatttcttaaccattgcccttaagacactgattagcaa 16209790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 535 - 624
Target Start/End: Complemental strand, 26842303 - 26842214
Alignment:
Q  535 cataaaagtttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||| ||||| ||||| |||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  26842303 cataaacgtttggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 26842214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Original strand, 2638822 - 2638898
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||| ||||  |||||||  |||  ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  2638822 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 2638898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 2639534 - 2639458
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  2639534 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 2639458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Original strand, 26841589 - 26841665
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  26841589 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 26841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 38490892 - 38490817
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    ||||||||||||||  | |||||||||||| ||||||||| |||||||| | ||| |||| ||||||||||||||||    
T  38490892 cttaattgcactttc-ctccctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttgc 38490817  T

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Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 18749729 - 18749810
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| | || | |||||| |||||| ||  ||||||||||||||||||| ||||||  |||||||||||||||    
T  18749729 ttaattgcacttttactcc-tctagtttgtcaattatgtgattttgcaccccatagttttaaacgaatgattttgccccctat 18749810  T

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Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 29140161 - 29140262
Alignment:
Q  186 ccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaa-tagtgtaattattgctaa-gaaaaaagtaagacttgtattttcaagaca 283  Q
    |||||||  ||| |||||||||||||||| ||||| |||| | | ||||| | |||||||||||||||| |||||||  || ||||||||||||| ||||    
T  29140161 ccttgagatattggttaaagtactaaaataagtaattttgaaacaaaaaaattgtgtaattattgctaaggaaaaaataaaaacttgtattttcaggaca 29140260  T
Q  284 aa 285  Q
    ||    
T  29140261 aa 29140262  T

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Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 600
Target Start/End: Complemental strand, 30191282 - 30191225
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    |||| ||||||||||||||| ||||||||  ||||| |||||||| ||||||||||||    
T  30191282 tttggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcacccc 30191225  T

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Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 624
Target Start/End: Original strand, 18296078 - 18296154
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||| ||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  18296078 cttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 18296154  T

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Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 258
Target Start/End: Complemental strand, 37519827 - 37519733
Alignment:
Q  165 aaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagt--aactttgcatcgaaaaatagtgtaattattgctaagaaaa 258  Q
    ||||||||||||||| || ||||||||| |||| ||||||||| |||||| |||  || |||||||  |||||| || ||||||||| ||||||||    
T  37519827 aaggagaatgctaaccattgcccttgagtcattggttaaagtattaaaataagtaaaagtttgcat-aaaaaatggtttaattattgttaagaaaa 37519733  T

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Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 7591204 - 7591279
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    ||||||| ||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 7591279  T

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Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 13832202 - 13832269
Alignment:
Q  197 tagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa 264  Q
    |||||||||| ||||||| ||||| |||||||| ||| |  |||| ||||||||||||| ||||||||    
T  13832202 tagttaaagttctaaaataagtaattttgcatcaaaagactgtgtgattattgctaagacaaaagtaa 13832269  T

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Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 14846019 - 14845964
Alignment:
Q  165 aaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaa 220  Q
    ||||||||||||||| || ||||||||| |||| ||||||||| |||||| |||||    
T  14846019 aaggagaatgctaaccattgcccttgagtcattggttaaagtattaaaataagtaa 14845964  T

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Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 340
Target Start/End: Complemental strand, 37519733 - 37519639
Alignment:
Q  246 attgctaagaaaaaagtaa-gacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    |||| ||||||||| |||| ||||||||||| |||||||||||||  |||| || |||| ||||| ||||  |||||| |||| ||||||||||||    
T  37519733 attgttaagaaaaaggtaaagacttgtattt-caagacaaagtttatattaatggaatccttaaccattgtccttagggcactagttagcaagacc 37519639  T

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Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 2396798 - 2396688
Alignment:
Q  199 gttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttttcattatt 297  Q
    |||||||||||||||| ||||| |||| ||  |||| | ||||||| ||||  ||||||||||| |||| || ||| | |||||||||||||| |||| |    
T  2396798 gttaaagtactaaaataagtaattttgtattaaaaagtggtgtaatcattgtcaagaaaaaagtaaagatttatatctccaagacaaagtttttattaat 2396699  T
Q  298 gaaatctttaa 308  Q
    | |||| ||||    
T  2396698 ggaatccttaa 2396688  T

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Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 345
Target Start/End: Complemental strand, 5525283 - 5525249
Alignment:
Q  311 attgctcttaggacactggttagcaagacctttaa 345  Q
    ||||||||||||||||||||| |||||||||||||    
T  5525283 attgctcttaggacactggttggcaagacctttaa 5525249  T

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Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 578 - 624
Target Start/End: Complemental strand, 7591872 - 7591826
Alignment:
Q  578 tcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  7591872 tcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 7591826  T

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Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 4818847 - 4818779
Alignment:
Q  195 attagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa 264  Q
    |||||||||||||||||||| |||||||||| |   |||||| |||||||||||  ||||| ||||||||    
T  4818847 attagttaaagtactaaaataagtaactttg-aaataaaaattgtgtaattattattaagataaaagtaa 4818779  T

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Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 18055367 - 18055314
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccat 602  Q
    |||||||||||||||||| |||   ||| |||||||||| ||||||||||||||    
T  18055367 ttaattgcactttttccctctaccttttgtcaattgtgcgattttgcaccccat 18055314  T

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Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 20347516 - 20347464
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  |||  ||||||||| ||||||||||||    
T  20347516 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20347464  T

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Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Original strand, 30190925 - 30190977
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  |||  ||||||||| ||||||||||||    
T  30190925 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 30190977  T

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Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 549 - 631
Target Start/End: Original strand, 34498125 - 34498207
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccctat 34498207  T

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Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 171 - 340
Target Start/End: Original strand, 27982289 - 27982455
Alignment:
Q  171 aatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa-gactt 269  Q
    |||| |||| || ||||||| |||||| |||||||||||||||| ||||| ||||    ||||| | ||||||| ||| ||||||||||||||| |||||    
T  27982289 aatgttaaccattgcccttggggcattggttaaagtactaaaataagtaagtttg----gaaaagtggtgtaatcattactaagaaaaaagtaaagactt 27982384  T
Q  270 gtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    |||||| |||||||||||||  |||| || |||| ||||  ||||| |||||| |||||||||||||||||    
T  27982385 gtatttccaagacaaagtttctattaatggaatccttaatcattgcccttagggcactggttagcaagacc 27982455  T

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Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 171 - 340
Target Start/End: Original strand, 28039591 - 28039757
Alignment:
Q  171 aatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa-gactt 269  Q
    |||| |||| || ||||||| |||||| |||||||||||||||| ||||| ||||    ||||| | ||||||| ||| ||||||||||||||| |||||    
T  28039591 aatgttaaccattgcccttggggcattggttaaagtactaaaataagtaagtttg----gaaaagtggtgtaatcattactaagaaaaaagtaaagactt 28039686  T
Q  270 gtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    |||||| |||||||||||||  |||| || |||| ||||  ||||| |||||| |||||||||||||||||    
T  28039687 gtatttccaagacaaagtttctattaatggaatccttaatcattgcccttagggcactggttagcaagacc 28039757  T

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Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 37396710 - 37396793
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||  | ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  37396710 cttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37396793  T

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Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 15444698 - 15444616
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||||||||||  |||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctat 15444616  T

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Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 25439176 - 25439095
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  25439176 ttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctat 25439095  T

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Target: chr8; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 538 - 631
Target Start/End: Complemental strand, 16169669 - 16169576
Alignment:
Q  538 aaaagtttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||| ||||||||||||||| | ||||||||||| |||||||||||| |||||| |  ||||||| |||||||||||||||||||||||    
T  16169669 aaaagtttggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctat 16169576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 9623499 - 9623587
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||||| | |||||||||  ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  9623499 tttggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctat 9623587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 165 - 336
Target Start/End: Original strand, 12956216 - 12956384
Alignment:
Q  165 aaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa 264  Q
    |||||||||| |||| ||  | |||| |||||| |||||||||||||| | ||||| ||||||||||||| | ||||||| |||||||||||||||  ||    
T  12956216 aaggagaatgttaaccattactcttggggcattggttaaagtactaaagtaagtaagtttgcatcgaaaattggtgtaatcattgctaagaaaaaataaa 12956315  T
Q  265 gacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaa 336  Q
    || |||||||| ||  ||| |||||| |||| || |||| ||||  |||||||||| |||||||||||||||    
T  12956316 gaattgtatttcca--acatagtttttattaatggaatccttaatcattgctctta-gacactggttagcaa 12956384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 163 - 339
Target Start/End: Original strand, 22488762 - 22488945
Alignment:
Q  163 aaaaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtg------taattattgctaagaa 256  Q
    ||||||||||||||||| || ||||||| |||||| ||||||||||| |||| ||||| ||| ||||||||| | | |      ||| ||||||||||||    
T  22488762 aaaaggagaatgctaaccattgcccttggggcattggttaaagtacttaaataagtaagtttacatcgaaaagtgggggtggggtaactattgctaagaa 22488861  T
Q  257 aaaagt-aagacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagac 339  Q
    |||||| || |||||||||| ||| |||||||||  |||| || |||| ||||| ||| | |||||| ||||||||||||||||    
T  22488862 aaaagtgaaaacttgtatttccaaaacaaagtttctattaatggaatccttaaccattacccttagggcactggttagcaagac 22488945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 24473340 - 24473428
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| |||||||||||||||||||||||||||||  ||||||||  ||||||||||||||| ||| ||| |||||||||||||||||||    
T  24473340 tttggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctat 24473428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 37397202 - 37397114
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||    
T  37397202 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctat 37397114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 17431289 - 17431372
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||| |||||||| |||||||||| ||||| |||| |||||||| |||||||||||||||||||||||    
T  17431289 cttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctat 17431372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 20861690 - 20861607
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| |||||||||||||||| |  ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||    
T  20861690 cttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcctcctat 20861607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 41662523 - 41662606
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||| ||||||||  ||||||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  41662523 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 41662606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 165 - 341
Target Start/End: Complemental strand, 41168773 - 41168595
Alignment:
Q  165 aaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaatta-ttgctaagaaaaaagt- 262  Q
    |||||||||| |||| || ||||||  |  |||||||||||||||||||| ||||| ||||||| ||||| |  |||||||| ||||||||| ||||||     
T  41168773 aaggagaatgttaaccattgcccttaggatattagttaaagtactaaaataagtaagtttgcattgaaaagtgatgtaattatttgctaagacaaaagta 41168674  T
Q  263 aagacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacct 341  Q
    ||||||||||||| |||||||| ||||| |||| || |||| ||||| |||    |||| |||||||||||||| ||||    
T  41168673 aagacttgtatttccaagacaatgtttttattaatggaatccttaaccattatctttagaacactggttagcaatacct 41168595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 539 - 607
Target Start/End: Original strand, 25438785 - 25438853
Alignment:
Q  539 aaagtttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagttt 607  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||||||||||||    
T  25438785 aaagtttgacttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttt 25438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 6199148 - 6199065
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||   |||||||||||  ||||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  6199148 cttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 6199065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 24473820 - 24473737
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||   |||||||||||  ||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  24473820 cttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctat 24473737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 29374654 - 29374551
Alignment:
Q  168 gagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaagac 267  Q
    |||||||||||| ||   ||||||| |||| ||||||||| |||||| ||||| ||| ||||||||| | |||||||||||||||||||||||  |||||    
T  29374654 gagaatgctaaccattatccttgagacattggttaaagtagtaaaataagtaaatttacatcgaaaagtggtgtaattattgctaagaaaaaataaagac 29374555  T
Q  268 ttgt 271  Q
    ||||    
T  29374554 ttgt 29374551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 34498607 - 34498524
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||||||||||   |||||||| ||||||||||||||||||| |||| || |||| ||||||||||    
T  34498607 cttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctat 34498524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 9822745 - 9822826
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||| |||||||||||||||  |||||||  |||||||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  9822745 tttggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 9822826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 548 - 624
Target Start/End: Original strand, 13936725 - 13936800
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    ||||||||||||||| ||||||||  |||| ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  13936725 cttaattgcactttt-ccccctatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 13936800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 16169171 - 16169258
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |  ||||||||||  |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||    
T  16169171 tttggcttaattgcactttt-catcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctat 16169258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 44167265 - 44167185
Alignment:
Q  210 aaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaaagttt 289  Q
    ||||| ||||| ||||||||||||| | ||||||| ||||||||||||||||| |||| |||||||| |||||||||||||    
T  44167265 aaaataagtaagtttgcatcgaaaagttgtgtaatcattgctaagaaaaaagtaaagatttgtatttccaagacaaagttt 44167185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 6198660 - 6198743
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||  ||| ||| || |  ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  6198660 cttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 6198743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 595
Target Start/End: Original strand, 33726692 - 33726743
Alignment:
Q  544 ttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgc 595  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  33726692 ttgacttaattgcactttttccccctatagtttaccaattgtgcgattttgc 33726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 2856528 - 2856611
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||| | |||| | |||||||||||  ||||||||| |||||||||||||||||||||||||  |||||||  |||||||    
T  2856528 cttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgttcgattttatcccctat 2856611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 15444213 - 15444296
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| |||| ||| |||||||||  ||||||| ||||||| ||  ||||||||| |||||||||||||||| ||||||    
T  15444213 cttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgattttgctccctat 15444296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 34653435 - 34653333
Alignment:
Q  161 aaaaaaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaa 260  Q
    |||||||||||||| ||||||  ||||||||||||||  ||||||||||||||| |||||| || |  | |||| | ||||||||||||| |||| ||||    
T  34653435 aaaaaaggagaatgataactagtgcccttgaggcattgattaaagtactaaaataagtaacattactacaaaaagttgtgtaattattgc-aagacaaaa 34653337  T
Q  261 gtaa 264  Q
    ||||    
T  34653336 gtaa 34653333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 31505495 - 31505620
Alignment:
Q  159 ttaaaaaaggagaatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaa 258  Q
    |||| |||||||||||||||| || | | || ||||||| ||||||||| |||||| ||||| |||| ||  ||||||| ||||||||||| ||||| ||    
T  31505495 ttaataaaggagaatgctaacaattgtctttaaggcattggttaaagtattaaaataagtaaatttgtat-taaaaataatgtaattattgttaagacaa 31505593  T
Q  259 aagt-aagacttgtattttcaagacaa 284  Q
    |||| |||||| ||||||  |||||||    
T  31505594 aagtaaagactggtatttctaagacaa 31505620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 22851387 - 22851468
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||| |||||||||||||||  |||||||  ||| |||||||||| ||||||||||||||  ||| |||| |||||||||||    
T  22851387 tttggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttgc 22851468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 624
Target Start/End: Complemental strand, 39724105 - 39724024
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||| |||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  39724105 tttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 39724024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 9823413 - 9823337
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  9823413 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 9823337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 13937441 - 13937365
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    ||||||||||||||| ||||||||  ||| |||||||||| | ||||||||||||  ||| ||||||| ||||||||    
T  13937441 cttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttgc 13937365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 166 - 340
Target Start/End: Original strand, 8488605 - 8488783
Alignment:
Q  166 aggagaatgctaactatagcccttgaggcattagttaaagtactaaaatga-gtaactttgcatcgaaaaatagtgtaattattgctaagaa--aaaagt 262  Q
    |||| ||||||||| |  ||||||| |||||| |||||||| ||||||| | |||| ||||| || |||| | || |||||||||||||||   ||||||    
T  8488605 aggaaaatgctaacgagtgcccttggggcattggttaaagttctaaaataaagtaagtttgcctcaaaaagtggtataattattgctaagagtcaaaagt 8488704  T
Q  263 -aagacttgtattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
     || |||||||||| |||||||||  ||| ||||  ||| || ||||||| ||| || ||| |||| ||||||||||||    
T  8488705 caaaacttgtatttccaagacaaaaattttattaaggaattccttaactaatgccctcagggcactcgttagcaagacc 8488783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 13027332 - 13027257
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    ||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 13027257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 631
Target Start/End: Complemental strand, 33727125 - 33727074
Alignment:
Q  580 aattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||| |||||||||  |||||||| |||||||||||||||||||||||    
T  33727125 aattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctat 33727074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 3307335 - 3307416
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||| |||||||||| ||||  |||||||  ||| |||||||||| |||||||| |||||| ||| |||| |||||||||||    
T  3307335 tttggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttgc 3307416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 546 - 631
Target Start/End: Original strand, 15442763 - 15442848
Alignment:
Q  546 gacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||| |||| ||||||||| ||   ||||||||  ||||||||||||||  ||| ||||| |||||||||| ||||||    
T  15442763 gacttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttgcaccctat 15442848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 600
Target Start/End: Original strand, 765732 - 765788
Alignment:
Q  544 ttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||||||| ||||||||  |||  ||||||||| ||||||||||||    
T  765732 ttgacttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 765788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 624
Target Start/End: Original strand, 13026637 - 13026713
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||||||||  |||||||  |||  ||||||||| |||||||||| |||  ||| ||||||||||||||||    
T  13026637 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttgc 13026713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 15156237 - 15156185
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  ||| |||||||||| ||||||||||||    
T  15156237 cttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacccc 15156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 3423718 - 3423807
Alignment:
Q  171 aatgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaa 260  Q
    |||||||||||  | | |||||| ||  |||||||||||||||| ||||| |||| | | |||| | |||||||||||||||||| ||||    
T  3423718 aatgctaactagtgtcgttgaggtatcggttaaagtactaaaataagtaattttgtaactaaaacttgtgtaattattgctaagacaaaa 3423807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 600
Target Start/End: Complemental strand, 37752473 - 37752416
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    |||| ||||||||||||||| ||||||||  ||| | |||||||| ||||||||||||    
T  37752473 tttggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 37752416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Original strand, 15155885 - 15155937
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  ||| | |||||||| ||||||||||||    
T  15155885 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 15155937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 41662455 - 41662403
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  |||  ||||||||| ||||||||||||    
T  41662455 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 41662403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Original strand, 43245873 - 43245925
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||||||||||||  |||   |||||||| ||||||||||||    
T  43245873 cttaattgcactttttccccctatcttttgataattgtgcgattttgcacccc 43245925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 332 - 415
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  332 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 415  T

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Target: scaffold0460; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 543 - 627
Target Start/End: Complemental strand, 819 - 736
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcccc 627  Q
    |||| |||||||||||||||||||| ||||||||  ||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  819 tttggcttaattgcactttttcccc-tatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgcccc 736  T

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Target: scaffold0069 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 548 - 629
Target Start/End: Original strand, 50077 - 50156
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccct 629  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50077 cttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccct 50156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 50563 - 50475
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgca-ccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||    
T  50563 tttggcttaattgcactttt-ccccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctat 50475  T

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Target: scaffold0041 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 38747 - 38664
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||| | |||||| ||||||||||||||||    
T  38747 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctat 38664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 578 - 631
Target Start/End: Original strand, 38283 - 38336
Alignment:
Q  578 tcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| |||||||| |||||||||| ||| |||||||||||||||||||    
T  38283 tcaattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctat 38336  T

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Target: scaffold0017 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 185326 - 185243
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| | |||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  185326 cttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 185243  T

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Target: scaffold0017; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 184841 - 184924
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||  || ||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  184841 cttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctat 184924  T

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Target: chr6 (Bit Score: 60; Significance: 3e-25; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 7654600 - 7654517
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| ||||||| || ||||||||||||    
T  7654600 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctat 7654517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 10087910 - 10087827
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||||| ||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  10087910 cttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 10087827  T

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Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 33974351 - 33974268
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| |||| |||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  33974351 cttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 33974268  T

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Target: chr6; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 32734047 - 32733965
Alignment:
Q  549 ttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||| | |||||||||||  ||||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 32733965  T

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Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 2354406 - 2354493
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| |||||||||| |||||||||||||||||| |||||||| | |||||||| ||||| ||||||||||||||||||| ||||||||    
T  2354406 tttggcttaattgca-tttttccccctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctat 2354493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 2354862 - 2354779
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||| |||| ||  ||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  2354862 cttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccctat 2354779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 22755141 - 22755058
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||  |||||||| |||||| ||| |||||||||| |||||||| |||||||||||||||||||||||    
T  22755141 cttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctat 22755058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 564 - 631
Target Start/End: Complemental strand, 29074408 - 29074341
Alignment:
Q  564 ccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  29074408 ccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctat 29074341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 564 - 631
Target Start/End: Complemental strand, 29079172 - 29079105
Alignment:
Q  564 ccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  29079172 ccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctat 29079105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 564 - 631
Target Start/End: Complemental strand, 29106981 - 29106914
Alignment:
Q  564 ccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  29106981 ccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctat 29106914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 200 - 323
Target Start/End: Complemental strand, 1407434 - 1407313
Alignment:
Q  200 ttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaagacttgtattttcaagacaaagttttcattattga 299  Q
    ||||||||||||||| ||||| ||||||||||||| |  |||||||||| |||||||||||  ||||| |||||||| |||||  |||||  | || |||    
T  1407434 ttaaagtactaaaataagtaagtttgcatcgaaaagtgatgtaattattactaagaaaaaataaagacatgtatttttaagac--agtttctaataatga 1407337  T
Q  300 aatctttaactattgctcttagga 323  Q
    |||| ||||| ||||| |||||||    
T  1407336 aatcattaaccattgcccttagga 1407313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 543 - 631
Target Start/End: Complemental strand, 22684414 - 22684327
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |||| ||||||||  ||||||||  ||||||||||||||||||| |||| | ||||||||||||||||    
T  22684414 tttggcttaattgcactttt-ccccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctat 22684327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 22754654 - 22754741
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||| ||||||||||||||| |||| ||||||||  ||||||||  ||||||||||||||||||| |||| | ||||||||||||||||    
T  22754654 tttggcttaattgcactttt-ccccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctat 22754741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 560 - 627
Target Start/End: Complemental strand, 13177096 - 13177029
Alignment:
Q  560 ttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgcccc 627  Q
    ||||||||||||||| | |||||||||  ||||| |||| |||||||| |||||||||||||||||||    
T  13177096 ttttccccctatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttgcccc 13177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 33828987 - 33829068
Alignment:
Q  543 tttgacttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||| |||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  33828987 tttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 33829068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 33829688 - 33829612
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||||||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  33829688 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 33829612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 172 - 338
Target Start/End: Complemental strand, 27673817 - 27673651
Alignment:
Q  172 atgctaactatagcccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa-gacttg 270  Q
    |||||||| || |||||| | ||||| |||||| || |||||| ||||| |||  |||||| | | || |||||||||||||| ||||| ||| ||||||    
T  27673817 atgctaaccattgcccttaaagcattggttaaattagtaaaataagtaagtttatatcgaagagtggt-taattattgctaagcaaaaaataaagacttg 27673719  T
Q  271 tattttcaagacaaagttttcattattgaaatctttaactattgctcttaggacactggttagcaaga 338  Q
    ||||| ||||||||  |||  | || || |||||||||  ||||| |||||| ||| |||||||||||    
T  27673718 tatttccaagacaacatttctagtaatggaatctttaatcattgcccttagggcaccggttagcaaga 27673651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 340
Target Start/End: Original strand, 29694302 - 29694449
Alignment:
Q  194 cattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaaga-aaaaagtaagacttgtattttcaagacaaagttttca 292  Q
    |||| |||||||||||||||| ||||| ||||||| ||||| |  ||||||||||| ||||| |||||  || |||||||||| ||||| ||  |||  |    
T  29694302 cattggttaaagtactaaaataagtaagtttgcattgaaaagtgatgtaattattgttaagacaaaaataaaaacttgtatttccaagataatatttcta 29694401  T
Q  293 ttattgaaatctttaactattgctcttaggacactggttagcaagacc 340  Q
    ||| |  |||| ||||| ||||  |||| |||||| ||||||||||||    
T  29694402 ttaatagaatccttaaccattgtccttaagacactagttagcaagacc 29694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 6454541 - 6454612
Alignment:
Q  192 ggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa 264  Q
    |||||| |||||| ||||||||| ||||| ||||||||| ||| | |||||||||||| ||||||||| ||||    
T  6454541 ggcattggttaaaatactaaaataagtaagtttgcatcg-aaagttgtgtaattattgttaagaaaaaggtaa 6454612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 23131566 - 23131462
Alignment:
Q  186 ccttgaggcattagttaaagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagt-aagacttgtattttcaagacaa 284  Q
    |||||||  ||| |||||||||||||||| ||||| ||||||   |||| | | |||||||||||||| | |||||| || | || ||||||||||||||    
T  23131566 ccttgagttattggttaaagtactaaaataagtaattttgcaataaaaagttgcgtaattattgctaaaacaaaagtaaaaatttatattttcaagacaa 23131467  T
Q  285 agttt 289  Q
    |||||    
T  23131466 agttt 23131462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 600
Target Start/End: Original strand, 18241856 - 18241908
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||| ||||||||  ||| | |||||||| ||||||||||||    
T  18241856 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 18241908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 631
Target Start/End: Original strand, 9907 - 9991
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgca-ccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||| || ||||||||||| |||||||||||||||||||||||    
T  9907 cttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctat 9991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 631
Target Start/End: Original strand, 19634 - 19705
Alignment:
Q  560 ttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    |||||||| ||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  19634 ttttccccatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 19705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 548 - 631
Target Start/End: Complemental strand, 20095 - 20012
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgccccctat 631  Q
    ||||||||||||||| |||| |||||||| |||||||||| ||||||| ||||||||||| ||||   ||||||||||||||||    
T  20095 cttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaactgacgattttgccccctat 20012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 600
Target Start/End: Original strand, 1120 - 1172
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||||||||||||  ||| | |||||||| ||||||||||||    
T  1120 cttaattgcactttttccccctatcttttgttaattgtgcgattttgcacccc 1172  T

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Target: scaffold0802; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 1472 - 1420
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcacccc 600  Q
    ||||||||||||||||||||||||  |||  ||||||||| ||||||||||||    
T  1472 cttaattgcactttttccccctatcttttgccaattgtgcgattttgcacccc 1420  T

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Target: scaffold0328 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 6847 - 6771
Alignment:
Q  548 cttaattgcactttttccccctatagtttatcaattgtgcaattttgcaccccatagtttaaaacgagcgattttgc 624  Q
    |||||||||| ||||  |||||||  |||  ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  6847 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 6771  T

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Target: scaffold0042 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 83644 - 83583
Alignment:
Q  203 aagtactaaaatgagtaactttgcatcgaaaaatagtgtaattattgctaagaaaaaagtaa 264  Q
    ||||| |||||| ||||| |||||||  |||| |||||||||||||| ||||| ||||||||    
T  83644 aagtattaaaattagtaagtttgcattaaaaagtagtgtaattattgataagacaaaagtaa 83583  T

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