View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13429_high_7 (Length: 497)
Name: NF13429_high_7
Description: NF13429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13429_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 403; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 18 - 484
Target Start/End: Complemental strand, 21102483 - 21102017
Alignment:
| Q |
18 |
atagcaatgcatggaactcgtgggatagattttgtaagaaaaagggccatgatccaagaaagggaaatcatgtgactttagagacccaaacatcctctac |
117 |
Q |
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| T |
21102483 |
atagccatgcatggaactcgtgggatagattttgtaagaaaaagggccatgatccaagcaagggaaatcatgtgactttagagacccaaacatcctctac |
21102384 |
T |
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| Q |
118 |
ctctcttgttgttgaagttaatggttagtttttcatttataaattgtttttccaaatatatgtatatatggatatttctcattgcccttatgttgtgtta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
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| T |
21102383 |
ctctcttgttgttgaagttaatggttagtttttcatttataatttgtttttccaaatatatgtatatatggatatttctaaatgcccttatgttgtgtta |
21102284 |
T |
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| Q |
218 |
ctatgtcgacactactcatgctaaatttattgctgaagacactagtattgataaatttgtcattcatcacaaccttcaagtggaacttgctcaaatatgc |
317 |
Q |
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|||||| ||||||||||||| ||||||||| ||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21102283 |
ctatgtagacactactcatgataaatttatggctaaatacactagtagtgataaatttgtcattcatcacaaccttcaagtggaacttgctcaaatatgc |
21102184 |
T |
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| Q |
318 |
aactcatatggcatccctccaccatcttacacattacaagagaagaggattattgctggatatgagtacatgaggttttatggtgcattggtttcgggat |
417 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
21102183 |
aacccatatggcatccctccaccatcttacacattacaagagaagaggattattgctggatatgagtacatgaggttttatggttcattggtttcgggat |
21102084 |
T |
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| Q |
418 |
cagttagaaaaccttctgtttcgattggaagatatgcaaaaactgagtttgatgcaaaggatgatgt |
484 |
Q |
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||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
21102083 |
cagttggaaaaccatctgtttcgattggaagatatgcaaaaactgagtttgatgcaaaggaagatgt |
21102017 |
T |
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