View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13429_low_20 (Length: 303)
Name: NF13429_low_20
Description: NF13429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13429_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 30273946 - 30273742
Alignment:
| Q |
2 |
gaggaggagcacagacttaccactgtataatttcttcaaaatatatctatataattttagctttccacnnnnnnnngagtcaatcttagttttccacttt |
101 |
Q |
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| T |
30273946 |
gaggagtaacactgacttaccactgtataatttcttcaaaatatatctatataattttagctttccacttttttttgagtcaatcttagttttccacttt |
30273847 |
T |
|
| Q |
102 |
agtctaaagcctatttgacttatttgatgtcttcatgctaatgtaaatatgtgcatcagacctaatctcatgacccaaatcctctaggaggacaagtcta |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30273846 |
agtctaaagcctatttgacttatttgatgtcttcatgctaatgtaaatatgtgcatcagacctaatctcatgacccaaatcctctaggaggacaagtcta |
30273747 |
T |
|
| Q |
202 |
acaac |
206 |
Q |
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||||| |
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| T |
30273746 |
acaac |
30273742 |
T |
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