View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13429_low_9 (Length: 490)

Name: NF13429_low_9
Description: NF13429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13429_low_9
NF13429_low_9
[»] chr4 (79 HSPs)
chr4 (2-315)||(1866340-1866647)
chr4 (341-471)||(1865355-1865485)
chr4 (2-180)||(45065246-45065424)
chr4 (2-177)||(30266265-30266428)
chr4 (2-177)||(30285760-30285923)
chr4 (10-181)||(15733445-15733616)
chr4 (38-187)||(41914909-41915058)
chr4 (12-187)||(44317542-44317717)
chr4 (2-121)||(47103735-47103854)
chr4 (2-180)||(18423587-18423765)
chr4 (2-187)||(30672960-30673143)
chr4 (2-123)||(14605902-14606023)
chr4 (2-90)||(29527809-29527897)
chr4 (17-180)||(10302096-10302259)
chr4 (13-180)||(11028081-11028248)
chr4 (4-82)||(21544578-21544656)
chr4 (8-162)||(31415869-31416023)
chr4 (12-180)||(26564838-26565006)
chr4 (12-153)||(31918505-31918646)
chr4 (12-164)||(6382208-6382360)
chr4 (12-179)||(47550274-47550441)
chr4 (2-161)||(10574370-10574517)
chr4 (12-180)||(7608977-7609145)
chr4 (14-154)||(19883002-19883142)
chr4 (205-269)||(26279954-26280018)
chr4 (39-162)||(43309517-43309640)
chr4 (12-137)||(6481998-6482123)
chr4 (12-164)||(11122805-11122957)
chr4 (12-148)||(15987214-15987350)
chr4 (12-164)||(21423868-21424020)
chr4 (64-180)||(37349171-37349287)
chr4 (12-180)||(43893235-43893402)
chr4 (12-180)||(55826543-55826711)
chr4 (12-187)||(31752463-31752638)
chr4 (2-90)||(31782610-31782698)
chr4 (2-57)||(568414-568469)
chr4 (2-80)||(16216673-16216751)
chr4 (12-81)||(25298852-25298921)
chr4 (2-102)||(40420583-40420683)
chr4 (14-102)||(42907895-42907983)
chr4 (18-140)||(3737789-3737911)
chr4 (235-273)||(26279204-26279242)
chr4 (12-164)||(5902556-5902702)
chr4 (2-90)||(1724320-1724408)
chr4 (246-313)||(26147025-26147086)
chr4 (42-158)||(39086194-39086310)
chr4 (14-93)||(23927648-23927727)
chr4 (20-101)||(4741215-4741296)
chr4 (14-82)||(25941147-25941215)
chr4 (12-96)||(32585496-32585580)
chr4 (274-313)||(2444371-2444410)
chr4 (436-471)||(4894690-4894725)
chr4 (274-313)||(32089628-32089667)
chr4 (12-75)||(33516097-33516160)
chr4 (431-470)||(36225480-36225519)
chr4 (274-313)||(47687908-47687947)
chr4 (274-313)||(47688494-47688533)
chr4 (274-313)||(53772806-53772845)
chr4 (2-36)||(11172966-11173000)
chr4 (13-99)||(12825462-12825548)
chr4 (101-155)||(20819582-20819636)
chr4 (27-117)||(37107433-37107522)
chr4 (131-180)||(11173068-11173117)
chr4 (14-87)||(16575121-16575194)
chr4 (52-137)||(17112985-17113069)
chr4 (2-59)||(24637189-24637246)
chr4 (131-180)||(31782708-31782757)
chr4 (12-137)||(39046959-39047084)
chr4 (12-105)||(48459488-48459581)
chr4 (12-117)||(50684474-50684579)
chr4 (235-271)||(1867772-1867808)
chr4 (431-471)||(9477537-9477577)
chr4 (64-135)||(12505505-12505577)
chr4 (108-180)||(16216578-16216650)
chr4 (52-148)||(19548890-19548985)
chr4 (431-471)||(23777425-23777465)
chr4 (131-175)||(24637276-24637320)
chr4 (2-46)||(37349120-37349164)
chr4 (131-187)||(47103845-47103901)
[»] chr8 (57 HSPs)
chr8 (2-180)||(15068507-15068684)
chr8 (2-162)||(15173817-15173977)
chr8 (2-187)||(2183518-2183703)
chr8 (12-180)||(24927950-24928118)
chr8 (14-162)||(30481358-30481506)
chr8 (12-180)||(32303062-32303230)
chr8 (7-176)||(10297454-10297623)
chr8 (2-154)||(40789580-40789730)
chr8 (12-137)||(45236066-45236191)
chr8 (20-154)||(27932422-27932556)
chr8 (12-158)||(29108763-29108909)
chr8 (17-182)||(40248288-40248453)
chr8 (12-148)||(14155533-14155669)
chr8 (14-137)||(27777160-27777283)
chr8 (2-148)||(20399583-20399729)
chr8 (15-88)||(30904050-30904123)
chr8 (12-158)||(39445517-39445663)
chr8 (15-164)||(1063511-1063666)
chr8 (235-313)||(38576283-38576355)
chr8 (15-161)||(12468159-12468302)
chr8 (2-180)||(14507158-14507321)
chr8 (12-90)||(17469256-17469334)
chr8 (12-137)||(24869986-24870111)
chr8 (72-148)||(2075785-2075861)
chr8 (14-90)||(14687402-14687478)
chr8 (14-137)||(1012622-1012744)
chr8 (274-313)||(14825642-14825681)
chr8 (34-81)||(24189531-24189578)
chr8 (22-137)||(29416149-29416263)
chr8 (432-471)||(40304610-40304649)
chr8 (20-90)||(9642360-9642430)
chr8 (12-82)||(17084124-17084194)
chr8 (2-43)||(8031129-8031170)
chr8 (12-117)||(29918608-29918713)
chr8 (15-148)||(43113577-43113710)
chr8 (72-180)||(4230649-4230757)
chr8 (20-180)||(27056474-27056634)
chr8 (274-310)||(27441468-27441504)
chr8 (14-82)||(28345494-28345562)
chr8 (30-146)||(35215555-35215670)
chr8 (274-313)||(3043979-3044018)
chr8 (436-471)||(9478973-9479008)
chr8 (274-313)||(11686978-11687017)
chr8 (274-313)||(31602015-31602054)
chr8 (14-105)||(39379575-39379664)
chr8 (436-470)||(1565816-1565850)
chr8 (2-36)||(2189910-2189944)
chr8 (275-309)||(26652296-26652330)
chr8 (2-91)||(5700347-5700436)
chr8 (12-93)||(14186321-14186402)
chr8 (12-117)||(37960944-37961049)
chr8 (431-471)||(1566081-1566121)
chr8 (431-471)||(3469256-3469296)
chr8 (274-306)||(9197101-9197133)
chr8 (2-82)||(9476030-9476110)
chr8 (247-275)||(37025739-37025767)
chr8 (431-471)||(42906824-42906864)
[»] chr7 (94 HSPs)
chr7 (2-187)||(27063134-27063319)
chr7 (2-187)||(30839045-30839231)
chr7 (2-180)||(27063330-27063508)
chr7 (2-121)||(22973384-22973503)
chr7 (2-180)||(31426004-31426183)
chr7 (2-121)||(18683970-18684089)
chr7 (6-182)||(29157349-29157527)
chr7 (2-180)||(37103046-37103224)
chr7 (38-154)||(42907986-42908102)
chr7 (2-150)||(44845082-44845232)
chr7 (19-180)||(45885684-45885845)
chr7 (12-180)||(21702665-21702833)
chr7 (2-82)||(32546188-32546268)
chr7 (17-180)||(10072477-10072640)
chr7 (12-154)||(38139737-38139879)
chr7 (12-137)||(7780014-7780139)
chr7 (15-164)||(30650640-30650789)
chr7 (17-154)||(39317006-39317143)
chr7 (12-164)||(16866175-16866327)
chr7 (12-164)||(18125163-18125315)
chr7 (12-180)||(35074476-35074644)
chr7 (2-81)||(28309488-28309567)
chr7 (21-162)||(8906526-8906667)
chr7 (13-148)||(5022603-5022737)
chr7 (17-187)||(5565219-5565389)
chr7 (12-117)||(12980383-12980488)
chr7 (20-148)||(3226897-3227025)
chr7 (12-180)||(17885471-17885639)
chr7 (15-137)||(5377094-5377216)
chr7 (20-162)||(33841092-33841233)
chr7 (14-148)||(45380115-45380248)
chr7 (12-180)||(17851860-17852026)
chr7 (19-148)||(43507458-43507587)
chr7 (3-82)||(21750779-21750858)
chr7 (5-121)||(29014930-29015052)
chr7 (20-154)||(44734304-44734436)
chr7 (12-154)||(38152893-38153034)
chr7 (25-154)||(39455960-39456089)
chr7 (235-313)||(25342495-25342567)
chr7 (235-313)||(25343301-25343373)
chr7 (2-164)||(27850267-27850423)
chr7 (10-121)||(43218287-43218398)
chr7 (31-89)||(10990871-10990929)
chr7 (12-90)||(18825881-18825959)
chr7 (12-161)||(3157089-3157237)
chr7 (12-117)||(10995817-10995921)
chr7 (52-137)||(24753210-24753294)
chr7 (2-82)||(23475280-23475360)
chr7 (14-90)||(23533613-23533688)
chr7 (14-90)||(26622959-26623035)
chr7 (246-313)||(27948444-27948505)
chr7 (53-137)||(37182321-37182405)
chr7 (2-93)||(19440016-19440107)
chr7 (431-473)||(2658315-2658357)
chr7 (113-182)||(21750877-21750946)
chr7 (205-309)||(25343191-25343289)
chr7 (20-140)||(41103670-41103784)
chr7 (64-137)||(44658429-44658502)
chr7 (274-310)||(1417609-1417645)
chr7 (274-310)||(3029213-3029249)
chr7 (431-471)||(23657856-23657896)
chr7 (15-95)||(25979921-25980001)
chr7 (246-313)||(30660591-30660652)
chr7 (246-313)||(37950460-37950521)
chr7 (274-310)||(38225990-38226026)
chr7 (431-471)||(43439340-43439380)
chr7 (52-119)||(2472029-2472096)
chr7 (274-313)||(3219561-3219600)
chr7 (274-313)||(3772541-3772580)
chr7 (274-313)||(40273558-40273597)
chr7 (13-76)||(44794051-44794113)
chr7 (274-309)||(46428832-46428867)
chr7 (2-152)||(2630521-2630670)
chr7 (235-273)||(5930534-5930572)
chr7 (441-471)||(24790818-24790848)
chr7 (14-180)||(25905637-25905802)
chr7 (275-313)||(37395515-37395553)
chr7 (56-102)||(41741447-41741493)
chr7 (15-64)||(3774078-3774127)
chr7 (131-180)||(22973494-22973543)
chr7 (107-180)||(24425469-24425542)
chr7 (430-471)||(24623463-24623504)
chr7 (52-137)||(37218051-37218136)
chr7 (232-273)||(40274643-40274684)
chr7 (131-176)||(43218389-43218433)
chr7 (2-30)||(2471991-2472019)
chr7 (431-471)||(9963812-9963852)
chr7 (278-310)||(14305091-14305123)
chr7 (131-175)||(18684080-18684124)
chr7 (274-310)||(23901109-23901145)
chr7 (274-314)||(26636875-26636915)
chr7 (431-471)||(33473807-33473847)
chr7 (73-137)||(44985880-44985944)
chr7 (14-82)||(48327453-48327521)
[»] chr1 (63 HSPs)
chr1 (2-154)||(35069834-35069986)
chr1 (2-160)||(16237243-16237401)
chr1 (24-180)||(19003585-19003741)
chr1 (3-118)||(23058459-23058574)
chr1 (12-137)||(49250735-49250860)
chr1 (2-164)||(9982825-9982987)
chr1 (12-187)||(29936418-29936599)
chr1 (17-180)||(17134954-17135117)
chr1 (12-180)||(36187139-36187307)
chr1 (12-164)||(51421860-51422012)
chr1 (20-137)||(10778529-10778646)
chr1 (12-148)||(13798240-13798376)
chr1 (12-135)||(45866150-45866272)
chr1 (14-81)||(48125701-48125768)
chr1 (2-80)||(10450078-10450156)
chr1 (13-154)||(34673227-34673368)
chr1 (20-180)||(19572431-19572591)
chr1 (18-137)||(5181047-5181166)
chr1 (12-111)||(28297936-28298035)
chr1 (17-136)||(34085242-34085361)
chr1 (18-137)||(42707799-42707917)
chr1 (12-154)||(23490716-23490858)
chr1 (50-180)||(23968619-23968749)
chr1 (13-102)||(12718769-12718858)
chr1 (12-137)||(16408944-16409069)
chr1 (12-117)||(41476934-41477039)
chr1 (12-180)||(44615394-44615562)
chr1 (12-180)||(44793007-44793175)
chr1 (12-154)||(24236706-24236848)
chr1 (42-136)||(33293494-33293588)
chr1 (18-96)||(34060028-34060106)
chr1 (52-137)||(24710889-24710974)
chr1 (17-137)||(18354042-18354162)
chr1 (274-313)||(13262831-13262870)
chr1 (108-162)||(10450014-10450068)
chr1 (98-180)||(20774654-20774736)
chr1 (12-137)||(12495012-12495137)
chr1 (20-137)||(40087426-40087542)
chr1 (274-310)||(17171932-17171968)
chr1 (14-90)||(39219262-39219338)
chr1 (246-313)||(49680809-49680870)
chr1 (436-471)||(32151776-32151811)
chr1 (12-187)||(34611075-34611250)
chr1 (274-313)||(36390382-36390421)
chr1 (18-81)||(50426679-50426742)
chr1 (20-90)||(3627994-3628064)
chr1 (23-137)||(5293368-5293481)
chr1 (12-90)||(8880450-8880528)
chr1 (275-313)||(12760774-12760812)
chr1 (72-154)||(13390459-13390540)
chr1 (2-56)||(16903515-16903569)
chr1 (37-151)||(27867230-27867344)
chr1 (64-154)||(39616346-39616436)
chr1 (274-315)||(4433862-4433903)
chr1 (438-471)||(52853897-52853930)
chr1 (431-471)||(508446-508486)
chr1 (274-310)||(17172677-17172713)
chr1 (431-471)||(27055685-27055725)
chr1 (431-471)||(35760499-35760539)
chr1 (431-471)||(37553121-37553161)
chr1 (346-397)||(37553421-37553473)
chr1 (431-471)||(46435645-46435685)
chr1 (2-46)||(49741060-49741104)
[»] chr6 (40 HSPs)
chr6 (2-180)||(18908884-18909062)
chr6 (2-152)||(9458654-9458804)
chr6 (2-160)||(29199836-29199982)
chr6 (2-180)||(20610901-20611079)
chr6 (12-180)||(5863302-5863470)
chr6 (12-180)||(32853845-32854013)
chr6 (20-154)||(32532549-32532683)
chr6 (12-180)||(3483842-3484010)
chr6 (12-102)||(256489-256579)
chr6 (12-180)||(10187999-10188160)
chr6 (2-121)||(9458849-9458968)
chr6 (12-154)||(15498325-15498467)
chr6 (4-162)||(17546840-17546997)
chr6 (12-137)||(27534685-27534810)
chr6 (12-180)||(2367327-2367495)
chr6 (15-187)||(28079608-28079780)
chr6 (12-117)||(27738773-27738878)
chr6 (3-127)||(12678066-12678190)
chr6 (12-137)||(12141386-12141511)
chr6 (12-93)||(14410861-14410942)
chr6 (13-117)||(10142500-10142604)
chr6 (52-180)||(30986294-30986422)
chr6 (14-89)||(7393897-7393972)
chr6 (14-79)||(10925463-10925528)
chr6 (79-180)||(31496502-31496603)
chr6 (79-180)||(31501888-31501989)
chr6 (19-80)||(32959868-32959929)
chr6 (12-96)||(32053089-32053173)
chr6 (15-102)||(20349068-20349155)
chr6 (249-309)||(19323762-19323816)
chr6 (274-313)||(10171980-10172019)
chr6 (12-111)||(12309573-12309672)
chr6 (436-471)||(18053698-18053733)
chr6 (12-111)||(24225699-24225798)
chr6 (274-313)||(26528821-26528860)
chr6 (2-148)||(30816251-30816395)
chr6 (30-81)||(34178347-34178398)
chr6 (235-273)||(5861918-5861956)
chr6 (275-309)||(8489295-8489329)
chr6 (131-187)||(9458959-9459015)
[»] scaffold0008 (2 HSPs)
scaffold0008 (2-180)||(67740-67918)
scaffold0008 (2-180)||(75583-75761)
[»] chr5 (55 HSPs)
chr5 (2-180)||(2681207-2681385)
chr5 (2-176)||(23044915-23045089)
chr5 (15-180)||(28568941-28569106)
chr5 (12-180)||(4920827-4920995)
chr5 (2-151)||(43523750-43523888)
chr5 (2-187)||(12915464-12915648)
chr5 (2-146)||(18116471-18116604)
chr5 (2-180)||(12712489-12712655)
chr5 (7-187)||(20650291-20650471)
chr5 (7-187)||(20634177-20634357)
chr5 (2-89)||(34259246-34259333)
chr5 (12-154)||(5908634-5908776)
chr5 (2-99)||(12773822-12773919)
chr5 (12-154)||(4583120-4583262)
chr5 (12-187)||(10127082-10127250)
chr5 (12-180)||(12866471-12866639)
chr5 (12-180)||(22694822-22694989)
chr5 (12-148)||(30996597-30996732)
chr5 (2-100)||(6810149-6810247)
chr5 (12-182)||(29245869-29246039)
chr5 (30-180)||(33727921-33728071)
chr5 (15-180)||(20973416-20973581)
chr5 (12-137)||(40517807-40517932)
chr5 (2-82)||(12250961-12251041)
chr5 (15-137)||(6155883-6156003)
chr5 (12-187)||(15890208-15890382)
chr5 (23-180)||(13401924-13402081)
chr5 (21-137)||(16311256-16311372)
chr5 (2-93)||(27900408-27900499)
chr5 (274-315)||(34600257-34600298)
chr5 (274-310)||(1554097-1554133)
chr5 (20-96)||(6369705-6369780)
chr5 (18-82)||(10822544-10822608)
chr5 (72-152)||(18207079-18207159)
chr5 (2-90)||(32574948-32575036)
chr5 (431-471)||(33106032-33106072)
chr5 (12-136)||(38972923-38973047)
chr5 (113-180)||(12773753-12773820)
chr5 (12-179)||(12834495-12834662)
chr5 (274-313)||(17071222-17071261)
chr5 (274-313)||(17071808-17071847)
chr5 (274-309)||(19360490-19360525)
chr5 (274-313)||(19366580-19366619)
chr5 (274-308)||(25858213-25858247)
chr5 (14-136)||(40187621-40187742)
chr5 (12-137)||(17853256-17853380)
chr5 (274-311)||(38057609-38057646)
chr5 (274-310)||(7632096-7632132)
chr5 (431-471)||(10142174-10142214)
chr5 (431-471)||(14148912-14148952)
chr5 (431-471)||(18014479-18014519)
chr5 (2-82)||(29664962-29665042)
chr5 (431-471)||(32715476-32715516)
chr5 (431-471)||(32716097-32716137)
chr5 (2-90)||(38006479-38006567)
[»] chr3 (65 HSPs)
chr3 (2-180)||(1772318-1772496)
chr3 (12-180)||(39728672-39728840)
chr3 (2-120)||(35687470-35687588)
chr3 (12-187)||(49580065-49580240)
chr3 (12-180)||(7469697-7469865)
chr3 (12-164)||(29284337-29284489)
chr3 (12-180)||(39655192-39655360)
chr3 (12-148)||(42243388-42243524)
chr3 (12-180)||(42758375-42758543)
chr3 (3-164)||(10043217-10043378)
chr3 (12-137)||(34154415-34154540)
chr3 (12-117)||(44172627-44172732)
chr3 (12-117)||(44179327-44179432)
chr3 (12-137)||(48390779-48390904)
chr3 (12-164)||(54317145-54317297)
chr3 (52-154)||(43582618-43582720)
chr3 (12-154)||(52198156-52198298)
chr3 (15-187)||(4557217-4557389)
chr3 (2-82)||(40796154-40796234)
chr3 (54-137)||(23910214-23910297)
chr3 (12-137)||(34025955-34026080)
chr3 (12-137)||(44252748-44252873)
chr3 (39-123)||(2490333-2490417)
chr3 (17-137)||(23580833-23580953)
chr3 (12-180)||(30616200-30616368)
chr3 (12-148)||(44953386-44953522)
chr3 (20-180)||(52572618-52572778)
chr3 (15-137)||(34119660-34119782)
chr3 (232-309)||(37520540-37520611)
chr3 (64-137)||(20087050-20087123)
chr3 (12-117)||(44639275-44639380)
chr3 (12-164)||(19111735-19111887)
chr3 (20-154)||(22535786-22535920)
chr3 (15-187)||(831013-831178)
chr3 (20-148)||(23154016-23154143)
chr3 (12-148)||(48305592-48305728)
chr3 (14-137)||(4016006-4016129)
chr3 (64-154)||(6738350-6738440)
chr3 (14-96)||(23546945-23547027)
chr3 (15-81)||(30904834-30904899)
chr3 (349-398)||(42371081-42371130)
chr3 (12-137)||(44106756-44106879)
chr3 (232-273)||(45393949-45393990)
chr3 (8-44)||(2487792-2487828)
chr3 (431-471)||(31153726-31153766)
chr3 (250-309)||(46150726-46150779)
chr3 (12-127)||(4553191-4553306)
chr3 (274-309)||(14871156-14871191)
chr3 (274-309)||(27082779-27082814)
chr3 (436-471)||(45713723-45713758)
chr3 (14-137)||(53631907-53632030)
chr3 (341-397)||(6746462-6746519)
chr3 (431-468)||(8814654-8814691)
chr3 (274-315)||(8949932-8949973)
chr3 (107-180)||(29858494-29858567)
chr3 (431-471)||(93381-93421)
chr3 (274-306)||(981673-981705)
chr3 (438-470)||(4968407-4968439)
chr3 (431-471)||(6746489-6746529)
chr3 (2-46)||(17146203-17146247)
chr3 (274-310)||(17603170-17603206)
chr3 (274-306)||(20212986-20213018)
chr3 (431-471)||(27065540-27065580)
chr3 (73-101)||(40890402-40890430)
chr3 (277-309)||(52605501-52605533)
[»] chr2 (61 HSPs)
chr2 (2-180)||(30978919-30979094)
chr2 (2-152)||(44057874-44058025)
chr2 (2-179)||(4427916-4428093)
chr2 (12-180)||(9632388-9632556)
chr2 (12-180)||(30846948-30847116)
chr2 (2-118)||(38342500-38342616)
chr2 (2-180)||(14331519-14331691)
chr2 (64-187)||(26755794-26755917)
chr2 (2-118)||(43371545-43371661)
chr2 (12-130)||(45256825-45256943)
chr2 (13-182)||(13830739-13830907)
chr2 (2-82)||(3547158-3547238)
chr2 (18-187)||(37106700-37106869)
chr2 (12-180)||(24414051-24414219)
chr2 (12-180)||(36128025-36128193)
chr2 (12-154)||(7314593-7314735)
chr2 (2-162)||(15546736-15546896)
chr2 (18-162)||(24051561-24051705)
chr2 (12-111)||(13705349-13705448)
chr2 (21-137)||(45115569-45115687)
chr2 (2-86)||(18485640-18485724)
chr2 (12-180)||(22900796-22900964)
chr2 (18-154)||(37472704-37472840)
chr2 (13-182)||(31942102-31942272)
chr2 (12-102)||(37999485-37999575)
chr2 (235-313)||(1297104-1297176)
chr2 (3-90)||(6164482-6164569)
chr2 (235-313)||(9275585-9275657)
chr2 (2-93)||(35965327-35965417)
chr2 (12-90)||(35248394-35248472)
chr2 (205-309)||(1296382-1296480)
chr2 (12-137)||(8915900-8916024)
chr2 (205-309)||(9276281-9276379)
chr2 (18-187)||(10212415-10212583)
chr2 (2-75)||(25210369-25210442)
chr2 (13-137)||(10208393-10208516)
chr2 (13-117)||(30696927-30697031)
chr2 (431-470)||(3677479-3677518)
chr2 (12-146)||(12193780-12193914)
chr2 (2-117)||(35510425-35510540)
chr2 (129-180)||(39256379-39256430)
chr2 (275-313)||(11751084-11751122)
chr2 (341-394)||(28452069-28452123)
chr2 (2-60)||(42576604-42576662)
chr2 (12-93)||(17845397-17845478)
chr2 (131-180)||(18485738-18485787)
chr2 (431-471)||(10862756-10862796)
chr2 (72-148)||(12341662-12341738)
chr2 (64-136)||(18106082-18106154)
chr2 (274-310)||(22301884-22301920)
chr2 (274-310)||(27177914-27177950)
chr2 (274-309)||(9540334-9540369)
chr2 (274-313)||(18174098-18174137)
chr2 (274-313)||(18174684-18174723)
chr2 (274-313)||(29559434-29559473)
chr2 (13-76)||(42798011-42798074)
chr2 (346-395)||(3670904-3670954)
chr2 (274-308)||(26752737-26752771)
chr2 (12-137)||(13531951-13532075)
chr2 (346-398)||(32275833-32275886)
chr2 (431-471)||(10863042-10863082)
[»] scaffold0059 (1 HSPs)
scaffold0059 (2-179)||(70086-70264)
[»] scaffold0184 (1 HSPs)
scaffold0184 (2-123)||(2960-3081)
[»] scaffold0013 (2 HSPs)
scaffold0013 (2-151)||(128068-128218)
scaffold0013 (2-179)||(105389-105566)
[»] scaffold0005 (1 HSPs)
scaffold0005 (2-123)||(211355-211476)
[»] scaffold0036 (1 HSPs)
scaffold0036 (14-111)||(33396-33493)
[»] scaffold0015 (1 HSPs)
scaffold0015 (2-90)||(55907-55994)
[»] scaffold0182 (1 HSPs)
scaffold0182 (3-82)||(16959-17038)
[»] scaffold0198 (1 HSPs)
scaffold0198 (12-82)||(20756-20826)
[»] scaffold0189 (1 HSPs)
scaffold0189 (14-90)||(4261-4337)
[»] scaffold0014 (1 HSPs)
scaffold0014 (50-182)||(14101-14232)
[»] scaffold0022 (2 HSPs)
scaffold0022 (15-137)||(90601-90717)
scaffold0022 (274-310)||(148376-148412)
[»] scaffold1532 (1 HSPs)
scaffold1532 (431-471)||(1316-1356)
[»] scaffold0244 (1 HSPs)
scaffold0244 (19-127)||(4554-4661)
[»] scaffold0157 (1 HSPs)
scaffold0157 (64-135)||(14900-14972)
[»] scaffold0041 (1 HSPs)
scaffold0041 (431-471)||(7315-7355)


Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 1866647 - 1866340
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  1866647 cattcgggtagagtttgggtatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaaacccatactcata 1866548  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcccaaagaatacccaa 201  Q
    | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1866547 cccagacctagtcaaatcggggaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcctaaagaatacccaa 1866448  T
Q  202 gaaatagaaacatgaactaattataagtcattagattaaatgagattgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaa 301  Q
    ||||||||| |||||||||||||| |||| || |||||||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||    
T  1866447 gaaatagaatcatgaactaattatgagtcgttggattaaatgagattgatggttgagatttggtgtca------acgaattcattgacacctagtgtcaa 1866354  T
Q  302 cggatcctaactta 315  Q
    ||||||||||||||    
T  1866353 cggatcctaactta 1866340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 341 - 471
Target Start/End: Complemental strand, 1865485 - 1865355
Alignment:
Q  341 atataggggctgctaatttacaccaccccaaaatagtaaggtgcaagttagcaagctaaaatagtggaaaatggtttttatgtaaatatgaagtaggtgt 440  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1865485 atatatgggctgctaatttacaccaccccaaaatattaaggtgcaagttagcaagctaaaatagtggaaaatggtttttatgtaaatatgaagtaggtgt 1865386  T
Q  441 agcttgctaacttacaccttagtgtttttag 471  Q
    ||||||||||||||||| |||||||||||||    
T  1865385 agcttgctaacttacactttagtgtttttag 1865355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 45065246 - 45065424
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||   |||| |||| |||||||||||||||||||||||||||||  | ||  |||    
T  45065246 cattcgggtagggtttgggtatgcgttcgggatgggtacatatatccctgttactcgtcccgtacccgtattttgaaatcgaggaaaacctaaacctata 45065345  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    | || |||||||||||| || |||||  ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  45065346 cccaaacccagtcaaattggggaaaactcgtcaaatcggggttggtttgggcgggtacccatgggcacgggttttgttg 45065424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 30266428 - 30266265
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||  ||||||||||| ||||||||  |||||         | |    
T  30266428 cattcaggtagggtttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaatcg--gaaaa---------aaa 30266340  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttg 177  Q
    | || ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  30266339 c-caaacccagtcaaatcggagaaaacccgtcaaatcggggttggtttgggcgggtacccatgtgcacgggttttg 30266265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 30285760 - 30285923
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||  ||||||||||| ||||||||  |||||         | |    
T  30285760 cattcaggtagggtttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaatcg--gaaaa---------aaa 30285848  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttg 177  Q
    | || ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  30285849 c-caaacccagtcaaatcggagaaaacccgtcaaatcggggttggtttgggcgggtacccatgtgcacgggttttg 30285923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 10 - 181
Target Start/End: Complemental strand, 15733616 - 15733445
Alignment:
Q  10 tagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacc 109  Q
    ||||||||| ||| | ||||||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||  ||||| || |||    
T  15733616 tagggtttgagtacgagttcggggtgggtacatatatctccgttacccgtctcgtacccgtattttgaaatcgaggaaaactcatatccatacccaaacc 15733517  T
Q  110 cagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgt 181  Q
     | | ||||||| ||||| |  ||||||||||||||||||||||| ||| ||| | ||||| ||||||||||    
T  15733516 taataaaatcggggaaaacctatcaaatcggggttggtttgggcgggtatccatgggcacgagttttgttgt 15733445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 38 - 187
Target Start/End: Complemental strand, 41915058 - 41914909
Alignment:
Q  38 tacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaat 137  Q
    ||||||||||| | |||||| || ||||||| ||||||||||||| ||||||| || |||||||| |  ||||||||||||||| |||||||| ||||||    
T  41915058 tacatatatccccgttacccttcccgtacccatattttgaaatcggggaaaacccaaactcatacccgaacccagtcaaatcggggaaaatccatcaaat 41914959  T
Q  138 cggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    |||||||||||||||||  |||||| | ||| ||||||||||||| ||||    
T  41914958 cggggttggtttgggcggttacccatgggcatgggttttgttgtcatgcc 41914909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 44317542 - 44317717
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||| ||||||| ||||| ||||| || |||||    
T  44317542 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaaccca 44317641  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    |||||| ||| ||||||||||||||| ||| ||| || ||||||||| ||||| | | ||||||||||| ||||||    
T  44317642 gtcaaaacggggaaaatccgtcaaattgggtttgattcgggcgagtaaccacgggtatgggttttgttgccttgcc 44317717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 47103735 - 47103854
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| | ||||||||||||||||||| | ||||||| || || ||||    
T  47103735 cattcgggtagggtttgggtatgggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaaacccata 47103834  T
Q  102 ctcagacccagtcaaatcgg 121  Q
    |  | |||||||||||||||    
T  47103835 caaaaacccagtcaaatcgg 47103854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 18423587 - 18423765
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||||||||||||| |||||||||||||| ||  ||||||||||||| ||||||||| |||| ||||||| |||||| |   ||||| |  ||| |||    
T  18423587 cattcgggtagggtttaggtatgggttcgggatgagtacatatatcctcgttacccgtcccgtatccgtattatgaaattggaaaaaacccgaacttata 18423686  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||| ||||| |||||| || ||||| | |||||||||||||||||||||| |  ||| || | |||||||||||||||    
T  18423687 ctcaaacccaatcaaataggggaaaacctgtcaaatcggggttggtttgggtggatactcatgggcacgggttttgttg 18423765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 187
Target Start/End: Original strand, 30672960 - 30673143
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||||||||||||||||||| |||||| ||||  ||||||||||| ||||| ||||| |||||||||||||| ||||||  |||||  || |||||||    
T  30672960 cattcgggtagggtttgggtataggttcgaggtg--tacatatatccccattatccgtcccgtacccgtattttaaaatcggagaaaatccaaactcata 30673057  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    | || ||||| ||||||| | ||||| ||||||||| | ||||||||||| ||  |||||| |  || ||||||||||||| ||||    
T  30673058 cccaaacccaatcaaatcagggaaaacccgtcaaattgtggttggtttggacggatacccatggacatgggttttgttgtcatgcc 30673143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 14606023 - 14605902
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||  |||||| || || ||||    
T  14606023 cattcaggtagagtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccata 14605924  T
Q  102 ctcagacccagtcaaatcggag 123  Q
    | || || ||||||||||||||    
T  14605923 cccaaactcagtcaaatcggag 14605902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 29527809 - 29527897
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||| |||||||    
T  29527809 cattcggatagggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaac 29527897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 10302096 - 10302259
Alignment:
Q  17 tgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaa 116  Q
    |||||||||||||||||||| |||||||| || | ||||||||||| |||||||| |||||||||| |||||||  | || ||||| || ||||| ||||    
T  10302096 tgggtatgggttcggggtgggtacatataaccccgttacccgtctcatacccgtactttgaaatcggggaaaacctaaacccatacccaaacccaatcaa 10302195  T
Q  117 atcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    | ||| ||||| || ||||||||| || ||| |||||| ||||||||| | |||||| ||||||    
T  10302196 aacggggaaaacccatcaaatcggagtgggtatgggcgggtacccacgggaacgggtattgttg 10302259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 13 - 180
Target Start/End: Original strand, 11028081 - 11028248
Alignment:
Q  13 ggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccag 112  Q
    |||||||||||| ||||||||||| ||| ||||| | | ||||||||| | ||||||| |||||| |||| ||||||| ||||| ||||| || | ||||    
T  11028081 ggtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaatccag 11028180  T
Q  113 tcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||| ||||||||| ||||||||| ||| |||||| ||| | ||| ||||||| | |||||||||||    
T  11028181 tcaaaacggagaaaacccgtcaaattgggtttggttcgggtgggtaaccacgtgtatgggttttgttg 11028248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 21544578 - 21544656
Alignment:
Q  4 ttcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||||||||||||||    
T  21544578 ttcgggtagggtttgggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaatcg 21544656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 31416023 - 31415869
Alignment:
Q  8 ggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcaga 107  Q
    ||||||||||| || |||||||||||||| |||||||||||   ||| || || |||||||||||||||||||||  |||||  || ||| ||||  | |    
T  31416023 ggtagggtttgagtgtgggttcggggtgggtacatatatccctgttatccatcccgtacccgtattttgaaatcggagaaaatccaaacttatacctaaa 31415924  T
Q  108 cccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtaccca 162  Q
    |||||||||||||| ||||| |||| |||||||||||| |||||||| |||||||    
T  31415923 cccagtcaaatcggggaaaacccgttaaatcggggttgatttgggcgggtaccca 31415869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 26564838 - 26565006
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||||||| |||||||||| ||| ||||| | | ||||||||| | ||||||  ||||||||||| ||||| |||| |||||||| || |||||    
T  26564838 gggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaatcggggaaagctcaaactcatacccaaaccca 26564937  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| || |||||||||||||||| ||  |||||| ||| | ||| ||||| | | |||||||||||    
T  26564938 gtcaaaacgaagaaaatccgtcaaattggatttggttcgggtgggtaaccacgggtatgggttttgttg 26565006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 31918646 - 31918505
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||  ||||| | |||||| |||| | ||||||| ||| || |||| ||||||| ||||||||||| || |||||    
T  31918646 gggtttgggtatgggttcggggtgggtaactatatacccattactcgtcccatacccgtgtttcgagatcggggaaaacccatactcatacccaaaccca 31918547  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggc 153  Q
    |||||| ||| ||||| ||||||||| ||| |||||| ||||    
T  31918546 gtcaaaacggggaaaacccgtcaaattgggtttggttcgggc 31918505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 164
Target Start/End: Complemental strand, 6382360 - 6382208
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| |||||| ||||  |||||| ||||| ||||| || |||||    
T  6382360 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccatacccatacccaaaccca 6382261  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    |||||| ||| ||||| ||||||||| ||| ||| || ||||| ||| |||||    
T  6382260 gtcaaagcggggaaaacccgtcaaattgggtttgattcgggcgggtaaccacg 6382208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 47550441 - 47550274
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| |   ||||||||| | ||||||| |||||| |||| |||||||||||||  |||| || |||||    
T  47550441 gggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaactcatacctatacccaaaccca 47550342  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgtt 179  Q
    ||||||  || ||||||||| ||||| | | |||||| ||||| ||| |||| || | ||||||||||    
T  47550341 gtcaaaatggggaaaatccgccaaattgagtttggttcgggcgggtaaccacatgtatgggttttgtt 47550274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 10574517 - 10574370
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||| | ||||||||| |||||| ||||| |||||||| |||||            |    
T  10574517 cattcgggtagggtttgggtatgagttcggggcgggtacatatatccccgttacccgtcccgtacctgtattatgaaatcggggaaa------------a 10574430  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtaccc 161  Q
     ||| ||||||||||||||| ||||| ||||||||||||| ||| |||||||| ||||||    
T  10574429 ttcaaacccagtcaaatcggggaaaacccgtcaaatcgggattgatttgggcgggtaccc 10574370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 7608977 - 7609145
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||| ||||||| ||||| ||||| || | |||    
T  7608977 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaatcca 7609076  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||| ||||||||| ||| || ||| ||| | ||| ||||| | | |||||||||||    
T  7609077 gtcaaaacggggaaaacccgtcaaattgggtttagttcgggtgggtaaccacgagtatgggttttgttg 7609145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 19883142 - 19883002
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagt 113  Q
    ||||| |||| |||||||||||||||| ||||||| | |||||| || |||| |||| |||| |||||| ||||||| || ||||||||||| ||||| |    
T  19883142 gtttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcggggaaaacccaaactcatactcaaacccaat 19883043  T
Q  114 caaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    |||| |||  |||| ||||||||| ||| |||||| |||||    
T  19883042 caaagcgggaaaaacccgtcaaattgggtttggttcgggcg 19883002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 26279954 - 26280018
Alignment:
Q  205 atagaaacatgaactaattataagtcattagattaaatgagattgatggttgagatttggtgtca 269  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  26279954 atagaaacatgaattaattatgagtcgttagattaaatgagattgatggttgagatttggtgtca 26280018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 162
Target Start/End: Original strand, 43309517 - 43309640
Alignment:
Q  39 acatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatc 138  Q
    ||||||| || | ||||||||| | ||||||| ||||||||||| | ||||| || ||||||||||| ||||||||||| ||||||||| |||||||| |    
T  43309517 acatataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaagcggagaaaacccgtcaaacc 43309616  T
Q  139 ggggttggtttgggcgagtaccca 162  Q
    |||||   |||||||| |||||||    
T  43309617 ggggtgaatttgggcgggtaccca 43309640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 6482123 - 6481998
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||||||||| | | |||| |||| | ||||||| |||| |||| | ||||||| || || ||||| || |||||    
T  6482123 gggtttgggtatgggttcggggtgggtacatatataccctttactcgtcccatacccgtgtttttaaattggggaaaacccaaacccatacccaaaccca 6482024  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
     ||||| | |||||||||||||||||    
T  6482023 atcaaaacagagaaaatccgtcaaat 6481998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 164
Target Start/End: Complemental strand, 11122957 - 11122805
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| ||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || ||||  |||||| ||||| ||||| || || ||    
T  11122957 gggtttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacccatacccatacccaaactca 11122858  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    |||||| |||| |||||||||||||| | | |||||| ||||| ||| |||||    
T  11122857 gtcaaaacggaaaaaatccgtcaaattgagtttggttcgggcgggtaaccacg 11122805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 15987350 - 15987214
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||  ||||| | | |||||| || | ||||||| |||| |||||  ||||||||||||| ||||| || |||||    
T  15987350 gggtttgggtatgggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaactcatacccatacccaaaccca 15987251  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
     |||||  |||||||| ||||||||| ||| ||||||    
T  15987250 atcaaaatggagaaaacccgtcaaattgggtttggtt 15987214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 21423868 - 21424020
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| ||||||||| ||||||| ||| ||||| | | ||||||||||| ||||||| ||| || || | ||||||| ||||| ||||| || |||||    
T  21423868 gggtttgtgtatgggtttggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagattggggaaaacccatacccatacccaaaccca 21423967  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    |||||| |||  |||||||||||||| ||  |||||| ||||| ||| |||||    
T  21423968 gtcaaaacgggaaaaatccgtcaaattggatttggttcgggcgggtaaccacg 21424020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 37349171 - 37349287
Alignment:
Q  64 tacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccac 163  Q
    ||||||| ||||||||||| |||||||||| |||||||| || ||||||||||| ||| ||||| | ||||||| ||| |||||| ||||| ||| ||||    
T  37349171 tacccgtgttttgaaatcggggaaaactcaaactcatacccaaacccagtcaaaacggggaaaacctgtcaaattgggtttggttcgggcgggtaaccac 37349270  T
Q  164 gtgcacgggttttgttg 180  Q
    | | | |||||||||||    
T  37349271 gggtatgggttttgttg 37349287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 43893235 - 43893402
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||||||  |||||||||||||| ||||| | | ||||||||| | ||||||| ||| || |||| ||||| | ||||| ||||| || |||||    
T  43893235 gggtttgggtatgaattcggggtggatacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaacc-catacccatacccaaaccca 43893333  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||| ||||||||| ||| |||| | ||||| ||| ||||| | | |||||||||||    
T  43893334 gtcaaaacggggaaaacccgtcaaattgggtttggctcgggcgggtaaccacgggtatgggttttgttg 43893402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 55826711 - 55826543
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||| |||||||||||||||| ||| ||||| | | ||||||||| | |||| || ||| || |||| ||||||| ||||||||||  || |||||    
T  55826711 gggtttggatatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgtttcgagatcggggaaaacccatactcatatccaaaccca 55826612  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| | | ||||||||||||||| ||  |||||| || || ||| ||||| | | |||||||||||    
T  55826611 gtcaaaacagggaaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgggttttgttg 55826543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 31752463 - 31752638
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| ||||||||||||||||||||  || ||||| ||| |||| |||||| ||||||| ||||||||||| ||||||| ||||| ||||  || |||||    
T  31752463 gggtatgggtatgggttcggggtgggaacctatatactcgttactcgtctcatacccgtgttttgaaatcggggaaaacccatacccatatccaaaccca 31752562  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
     ||||| |||  |||| ||||||||| ||  ||| || ||||| ||| || || | | ||||||||||||| ||||    
T  31752563 atcaaaacggtaaaaacccgtcaaattggatttgattcgggcgggtaaccgcgggtatgggttttgttgtcatgcc 31752638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 31782610 - 31782698
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||| |||| |||||||||||| ||| ||||||| ||||||||||| | ||||| ||  ||||||||||||||||||||| |||||||    
T  31782610 cattcaggtaaggtttgggtatgagtttggggtgggtacatatatccccgttacctgtaccgtacccgtattttgaaatcggggaaaac 31782698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 568414 - 568469
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattaccc 57  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||    
T  568414 cattcgggtaaggtttgggtatgggttcggggtgggtacatatatccccattaccc 568469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 16216751 - 16216673
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaat 80  Q
    ||||||||||||||||||||| ||||| ||||  | ||||||||||  |||||||||||||||| ||||||| ||||||    
T  16216751 cattcgggtagggtttgggtaagggtttggggaaggtacatatatctccattacccgtctcgtatccgtattatgaaat 16216673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 25298921 - 25298852
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatc 81  Q
    |||||||||||||||||||||||||| |  ||||||| |||||||| || ||||||||| ||||||||||    
T  25298921 gggtttgggtatgggttcggggtggacagctatatccccattacccatcccgtacccgtgttttgaaatc 25298852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 40420683 - 40420583
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||  |||||||||||| ||||||| |||| ||  |||||| |  |||| |||||| || || |||||||||||| |||||||||||||||||||    
T  40420683 cattcggggtgggtttgggtataggttcggagtggctaggtatatctttgttactcgtctcatatccatattttgaaatcaaggaaaactcatactcata 40420584  T
Q  102 c 102  Q
    |    
T  40420583 c 40420583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 42907895 - 42907983
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatac 102  Q
    ||||||||||||| ||||||||| ||| ||||||| |||||| |||| |||| |||| ||||||| |||  ||||||||||| ||||||    
T  42907895 gtttgggtatgggctcggggtgggtacctatatccccattactcgtcccgtatccgtgttttgaattcggagaaaactcataatcatac 42907983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 3737789 - 3737911
Alignment:
Q  18 gggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaa 117  Q
    ||||||||||||||| ||| |||||||| |||| ||||||||| | ||||||| ||||||||| | | ||||| |  || || ||  | ||| |||||||    
T  3737789 gggtatgggttcgggatgggtacatataacctcgttacccgtcccatacccgtgttttgaaattgggaaaaaccctaacccacacctaaaccaagtcaaa 3737888  T
Q  118 tcggagaaaatccgtcaaatcgg 140  Q
     |||| |||||||||||||||||    
T  3737889 gcggaaaaaatccgtcaaatcgg 3737911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 26279242 - 26279204
Alignment:
Q  235 gattaaatgagattgatggttgagatttggtgtcaacga 273  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26279242 gattaaatgagattgatggttgagatttggtgtcaacga 26279204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 164
Target Start/End: Complemental strand, 5902702 - 5902556
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||| |||||      || ||||| || |||||    
T  5902702 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaa------acccatacccaaaccca 5902609  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    |||||| ||| ||||| ||||||||| | | |||||| ||||| ||| |||||    
T  5902608 gtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccacg 5902556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 1724408 - 1724320
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||||  ||||||||||||||||||||||||| ||| |||||   | ||||||||| | ||||| | ||||||||||| |||||||    
T  1724408 cattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatcggggaaaac 1724320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 26147025 - 26147086
Alignment:
Q  246 attgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||| ||||||||||||||||||||      |||||||||||||||| |||||||||||||||||||    
T  26147025 attgaaggttgagatttggtgtcaac------gaattcgttgacacctggtgtcaacggatcctaact 26147086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 39086194 - 39086310
Alignment:
Q  42 tatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggg 141  Q
    ||||||| | ||||||||  || |||| | || ||||||||  ||||||||| |||||||  || ||||| ||||| ||||||||||||||||||| | |    
T  39086194 tatatccccgttacccgtaccgcacccatgttgtgaaatcggagaaaactcaaactcatatccaaacccaatcaaaacggagaaaatccgtcaaattgag 39086293  T
Q  142 gttggtttgggcgagta 158  Q
     ||||||||||| ||||    
T  39086294 tttggtttgggctagta 39086310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 23927727 - 23927648
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactca 93  Q
    ||||||||| ||||||||||||||||| |||||||   ||| |||||| ||||  || ||||||||||||| ||||||||    
T  23927727 gtttgggtaggggttcggggtggatacctatatccatgttaaccgtcttgtacttgtgttttgaaatcgagcaaaactca 23927648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 4741296 - 4741215
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||| ||| |||||||   ||| ||||| | ||||| | |||| ||||||||||||||||| |||||||    
T  4741296 gtatgggttcggggtgggtacttatatccctgttatccgtcccatacccatgttttaaaatcgaggaaaactcaaactcata 4741215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 25941147 - 25941215
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||||||||||||||||||||| ||| ||| | | | ||||| ||| ||||||||| |||||||||||    
T  25941147 gtttgggtatgggttcggggtgggtacctatcttcccgttacctgtcccgtacccgtgttttgaaatcg 25941215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 32585496 - 32585580
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatac 96  Q
    |||||||||||||||||| |||||| ||| ||||| | | ||||| ||| | ||||||| |||||||||||  ||||| ||||||    
T  32585496 gggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcggagaaaattcatac 32585580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 2444410 - 2444371
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  2444410 caacgaatccgttgacacctggtgtcaacggatcctaact 2444371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 471
Target Start/End: Complemental strand, 4894725 - 4894690
Alignment:
Q  436 ggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||||||||||||| |||||||||||||||||||||    
T  4894725 ggtgtagcttgctaccttacaccttagtgtttttag 4894690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 32089628 - 32089667
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  32089628 caacgaattcgttgacatctggtgtcaacggatcctaact 32089667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 33516160 - 33516097
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtatttt 75  Q
    |||||||||||| |||||||||||| ||| |||||||   |||||| |||||||||||| ||||    
T  33516160 gggtttgggtataggttcggggtgggtacttatatccctgttacccatctcgtacccgtgtttt 33516097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 470
Target Start/End: Original strand, 36225480 - 36225519
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgttttta 470  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  36225480 aagtgggtgtagcttgctaacttgcaccttagtgttttta 36225519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 47687947 - 47687908
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  47687947 caacgaattcgttaacacctggtgtcaacggatcctaact 47687908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 47688494 - 47688533
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  47688494 caacgaatccgttgacacctggtgtcaacggatcctaact 47688533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 53772845 - 53772806
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  53772845 caacgaatccgttgacacctggtgtcaacggatcctaact 53772806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 11172966 - 11173000
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtgg 36  Q
    |||||||| ||||||||||||||||||||||||||    
T  11172966 cattcgggaagggtttgggtatgggttcggggtgg 11173000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 12825548 - 12825462
Alignment:
Q  13 ggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactca 99  Q
    ||||||||||| ||||| |||||| ||| |||||   | ||||||||| | ||||||| ||||||||||| ||||||| || |||||    
T  12825548 ggtttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaactca 12825462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 155
Target Start/End: Complemental strand, 20819636 - 20819582
Alignment:
Q  101 actcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcga 155  Q
    ||||| ||||| ||||| ||||||||| |||| ||||| ||||||||||||||||    
T  20819636 actcaaacccaatcaaaacggagaaaacccgttaaatcagggttggtttgggcga 20819582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 37107433 - 37107522
Alignment:
Q  27 ttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaa 117  Q
    |||||||||| ||| ||||| | | ||||||||| | ||||||| ||||||||| | ||||||| || |||||||| || |||||||||||    
T  37107433 ttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaattg-ggaaaacccaaactcatacacaaacccagtcaaa 37107522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 11173068 - 11173117
Alignment:
Q  131 gtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||||||||||||||||||||| |||||||  |||| | |||||||||    
T  11173068 gtcaaatcggggttggtttgggcgggtacccatatgcatgagttttgttg 11173117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 16575121 - 16575194
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaa 87  Q
    |||||||||| ||||||| |||| ||| ||||||||| ||| || || ||||||||  |||| |||||||||||    
T  16575121 gtttgggtataggttcggagtgggtacttatatcctcgttatccatcccgtacccgcgttttaaaatcgaggaa 16575194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 17113069 - 17112985
Alignment:
Q  52 ttacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaat 137  Q
    |||||||| |||||||||| ||||  |||||  ||||| ||| |||||| | || || |||||||| |||||||||||||||||||    
T  17113069 ttacccgtatcgtacccgtgttttagaatcggagaaaa-tcaaactcattcccaaactcagtcaaagcggagaaaatccgtcaaat 17112985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 24637189 - 24637246
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgt 59  Q
    ||||| |||||||||||||||||||| | ||||||  |||||||||| | ||||||||    
T  24637189 cattcaggtagggtttgggtatgggtcctgggtgggcacatatatccccgttacccgt 24637246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 31782708 - 31782757
Alignment:
Q  131 gtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||||||| |||||||||||||| ||||||| | |||||| ||||||||    
T  31782708 gtcaaatcgaggttggtttgggcgggtacccatgggcacggattttgttg 31782757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 39046959 - 39047084
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||||||| || |||| ||| ||||| | | ||||  ||| | ||||||| ||| ||||| | ||||||| ||||| |||||||| |  ||    
T  39046959 gggtatgggtatgggtttggagtgggtacctatatacccgttacatgtcccatacccgtgtttggaaattggggaaaacccatacccatactcaaattca 39047058  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| ||||||||| || ||||||    
T  39047059 gtcaaaacggagaaaacccatcaaat 39047084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 48459488 - 48459581
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactca 105  Q
    |||| |||||||||||||||||||| ||| ||||| |   ||||||||  | ||||| | ||||||||||| ||||||| ||||  ||||||||    
T  48459488 gggtatgggtatgggttcggggtgggtacctatatacctgttacccgttccatacccatgttttgaaatcggggaaaacccatatccatactca 48459581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 50684474 - 50684579
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||| |||| || ||| ||  ||||||  | ||||||||| |||| ||||||||| |||||| || |||| ||  |||||||||| |||||    
T  50684474 gggtttgggtatgagttccggatgggtatctatatctccgttacccgtcccgtatccgtattttaaaatcggggtaaacccaagctcatactcaaaccca 50684573  T
Q  112 gtcaaa 117  Q
     |||||    
T  50684574 ctcaaa 50684579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 1867772 - 1867808
Alignment:
Q  235 gattaaatgagattgatggttgagatttggtgtcaac 271  Q
    |||||||||||||||||||||||||||| || |||||    
T  1867772 gattaaatgagattgatggttgagatttagtatcaac 1867808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 9477537 - 9477577
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||||||||||| ||| ||||||||||||||||    
T  9477537 aagtgggtgtagcttgctaatttaaaccttagtgtttttag 9477577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 12505577 - 12505505
Alignment:
Q  64 tacccgtattttgaaatcgaggaaaactcatactcatactc-agacccagtcaaatcggagaaaatccgtcaa 135  Q
    ||||||| ||||||||||| ||||||| || |||||||| | | ||||| ||||| ||||||||| |||||||    
T  12505577 tacccgtgttttgaaatcggggaaaacccaaactcataccctaaacccaatcaaagcggagaaaacccgtcaa 12505505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 16216650 - 16216578
Alignment:
Q  108 cccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||||||||| ||  |||| || ||||||||  ||||||||||||| |||| || | |||||||||||||||    
T  16216650 cccagtcaaattgggaaaaacccatcaaatcgaagttggtttgggcgggtactcatgggcacgggttttgttg 16216578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 19548985 - 19548890
Alignment:
Q  52 ttacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    ||||||||| |||||| || ||||||||||| ||||||| | ||  ||||| || |||||||||||  || ||||| ||||||||| ||| ||||||    
T  19548985 ttacccgtcccgtacctgtgttttgaaatcggggaaaacccttatccatacccaaacccagtcaaagaggggaaaa-ccgtcaaattgggtttggtt 19548890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 23777425 - 23777465
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| |||| ||||||||||||| |||||||||||||||||    
T  23777425 aagtgggtgcagcttgctaacttgcaccttagtgtttttag 23777465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 24637276 - 24637320
Alignment:
Q  131 gtcaaatcggggttggtttgggcgagtacccacgtgcacgggttt 175  Q
    |||||||| ||||||||||||||| ||||||| | ||||||||||    
T  24637276 gtcaaatcagggttggtttgggcgggtacccatgggcacgggttt 24637320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 37349120 - 37349164
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatat 46  Q
    ||||||||  |||||||||||||||||| |||||||||| |||||    
T  37349120 cattcgggacgggtttgggtatgggttcagggtggatacctatat 37349164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 47103845 - 47103901
Alignment:
Q  131 gtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    ||||||||||||||| |||||| | ||||||| | |||| |||||||||||| ||||    
T  47103845 gtcaaatcggggttgatttgggtgggtacccatgggcacaggttttgttgtcatgcc 47103901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 8e-56; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 15068684 - 15068507
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||||||||| ||||||| |  || ||||    
T  15068684 cattcgggtagggttcgggtatgggttcggggtggatacatatatcc-cgttacctgtcccgtacccgtattttgaaatcggggaaaacccgaacccata 15068586  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    | |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  15068585 cccagacccagtcaaatcggggaaaacccgtcaaatcggggttggtttgggcgggtacccatgggcacgggttttgttg 15068507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 15173977 - 15173817
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcatt-acccgtctcgtacccgtattttgaaatcgaggaaaactcatactcat 100  Q
    |||||||||| |||||| ||||| ||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||||| | |||||||| || |||    
T  15173977 cattcgggtacggtttgagtatgagttcgaggtggatacatatatc-tcatttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaacacat 15173879  T
Q  101 actcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtaccca 162  Q
    || || ||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||||    
T  15173878 acccaaacccagtcaaatcagagaaaacccgtcaaatcgaggttggtttgggcgggtaccca 15173817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 2183703 - 2183518
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||  |||||||  ||||||||||||||||||||||||  |||||  || |||||||    
T  2183703 cattcgggtagggtttgagtatgagttcggggtgggtacatatatctccattacctctctcgtacccgtattttgaaatcggagaaaatccaaactcata 2183604  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    |  | |||||||||||| | | ||||||||| ||||||| ||||||||||| | ||||||| | ||| || |||||||||| ||||    
T  2183603 cctaaacccagtcaaattgaaaaaaatccgtaaaatcggagttggtttgggtgggtacccatgagcatggattttgttgtcatgcc 2183518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 24927950 - 24928118
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||||| ||||||| ||| || |||  ||||||| ||||| ||||| || |||||    
T  24927950 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaaaacccatacccatacccaaaccca 24928049  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||| ||||||||| ||| |||||| ||||| ||| || || | | |||||||||||    
T  24928050 gtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttg 24928118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 30481506 - 30481358
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagt 113  Q
    ||||||||||||||||||||||| ||| |||||||||||||| |||||| ||| ||||||||||||||  | ||||| || ||||||||||| ||||| |    
T  30481506 gtttgggtatgggttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcaggaaaaacccaaactcatactcaaacccaat 30481407  T
Q  114 caaatcggagaaaatccgtcaaatcggggttggtttgggcgagtaccca 162  Q
    |||| | | |||||||| |||| |  || |||||| |||||| ||||||    
T  30481406 caaaacagggaaaatccatcaatttaggtttggttcgggcgattaccca 30481358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 32303062 - 32303230
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||| ||||||| ||||| ||||| || |||||    
T  32303062 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaaccca 32303161  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||| ||||||||| ||| ||| || ||||| ||| ||||| | | |||||||||||    
T  32303162 gtcaaaacggggaaaacccgtcaaattgggtttgtttcgggcgggtaaccacgggtatgggttttgttg 32303230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 10297454 - 10297623
Alignment:
Q  7 gggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcag 106  Q
    ||||||||||| ||||||||||| |||| | ||||||||||| | ||||| ||| ||| ||||||||||||||||| ||||||| || | ||| |  ||     
T  10297454 gggtagggttttggtatgggttcagggtaggtacatatatccccgttacctgtcccgtccccgtattttgaaatcggggaaaacccaaattcacatccaa 10297553  T
Q  107 acccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggtttt 176  Q
    ||||| | ||||| | ||||| |||||||||| || |||||||||||| ||||||| | ||| |||||||    
T  10297554 acccaataaaatcagggaaaacccgtcaaatcaggattggtttgggcgggtacccatgggcatgggtttt 10297623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 40789580 - 40789730
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||| |||||||||| |||||||||||| |||||||||||   |||||||||  |||||  |||| |||||| | ||||||| || |||||||    
T  40789580 cattcgggtagagtttgggtataggttcggggtgggtacatatatccctgttacccgtccagtacctatattatgaaattggggaaaacccaaactcata 40789679  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
     ||| || ||||||||   || |||||| ||||||||||||||||||||||||    
T  40789680 ttcaaactcagtcaaa--cgaaaaaatctgtcaaatcggggttggtttgggcg 40789730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 45236066 - 45236191
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| ||| |||||||||||||||| ||| ||||| | ||||||||||| | ||||||| ||||||||||  ||||||||||||| |||||||| || ||    
T  45236066 gggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcagggaaaactcatacccatactcaaactca 45236165  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| ||| ||||| |||||||||    
T  45236166 gtcaaaacggggaaaacccgtcaaat 45236191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 27932422 - 27932556
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    ||||||||||||||||| ||| ||||| | | |||| |||| | ||||||| ||||||||||| ||||||| ||||| ||||| || ||||||||||| |    
T  27932422 gtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaac 27932521  T
Q  120 ggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    || ||||| ||||||||| ||| |||||| |||||    
T  27932522 ggggaaaacccgtcaaattgggtttggttcgggcg 27932556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 29108909 - 29108763
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||||||||||||||| ||||||||| | | ||||||||| | ||||| | |||| |||||| | ||||| ||||| ||||| || |||||    
T  29108909 gggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaacccatacccatacccaaaccca 29108810  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagta 158  Q
    |||||| ||| ||||| ||||||||| ||| |||||| || ||||||    
T  29108809 gtcaaaacggggaaaacccgtcaaattgggtttggttcggacgagta 29108763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 40248453 - 40248288
Alignment:
Q  17 tgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaa 116  Q
    |||||||||||||||| ||| ||| ||||| | | ||| ||||||| ||||||| ||||||||||| |||||||  |||| ||||| || ||||||||||    
T  40248453 tgggtatgggttcgggatgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcggggaaaacatatacccatacccaaacccagtcaa 40248354  T
Q  117 atcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtc 182  Q
    | |||  |||| ||||||||| ||| ||||||  |||||||| || || | | |||||||||||||    
T  40248353 aacgggaaaaacccgtcaaattgggtttggttcaggcgagtaaccgcgggtatgggttttgttgtc 40248288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 14155533 - 14155669
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||||||  || |||||||||| |||||||||| |||||| |||  ||||||| ||||||||||| | ||||| || |||||||| || |||||    
T  14155533 gggtttgggtatgaatttggggtggataaatatatcctcgttacccatcttatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaaccca 14155632  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    |||| | ||| ||||| ||||||||| ||| ||||||    
T  14155633 gtcataccggggaaaacccgtcaaattgggtttggtt 14155669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 27777283 - 27777160
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagt 113  Q
    ||||||||||||||||||||||| ||| | ||||    ||||| ||| |||||| || ||||||||||| | |||||||| || ||||| || |||||||    
T  27777283 gtttgggtatgggttcggggtgggtacctgtatctctgttacctgtcccgtacctgtgttttgaaatcgggaaaaactcaaacacatacccaaacccagt 27777184  T
Q  114 caaatcggagaaaatccgtcaaat 137  Q
    |||| ||||||||| |||||||||    
T  27777183 caaaacggagaaaacccgtcaaat 27777160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 20399583 - 20399729
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||  ||||||||| ||||||||||||||| ||  ||||| | | ||||||||| | ||||||| |||||||||||  |||||| || || ||||    
T  20399583 cattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccaaacccata 20399682  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    | || ||||||||||| ||| |||||  |||||||| ||| ||||||    
T  20399683 cccaaacccagtcaaaacggggaaaactcgtcaaattgggtttggtt 20399729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 30904050 - 30904123
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaa 88  Q
    |||||||||||||  ||||||| ||| ||||||  ||||||||||||||||||||| |||||||||||||||||    
T  30904050 tttgggtatgggtatggggtgggtacttatatctccattacccgtctcgtacccgtgttttgaaatcgaggaaa 30904123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 39445663 - 39445517
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||| ||||||||||| ||| ||||  | | ||||| ||| | ||||||| ||||||||||| | ||||| ||||| ||||| || ||| |    
T  39445663 gggtatgggtatgagttcggggtgggtacctataaacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaaccta 39445564  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagta 158  Q
    |||||| ||| ||||||||||||||| | | |||||| || ||||||    
T  39445563 gtcaaaacggggaaaatccgtcaaattgagtttggttcggacgagta 39445517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 1063511 - 1063666
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcat------actcagac 108  Q
    |||||||||| ||||||||||| ||| ||||| | | ||| ||||| | ||||||| ||||||||||| | ||||| ||||| |||      || || ||    
T  1063511 tttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccacacccacac 1063610  T
Q  109 ccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    ||||||||| ||| ||||| ||||||||||||| |||||| ||||| ||| |||||    
T  1063611 ccagtcaaaacggggaaaacccgtcaaatcgggtttggttcgggcgggtaaccacg 1063666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 38576283 - 38576355
Alignment:
Q  235 gattaaatgagattgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| | ||||||||||||||||||||||||||||      || ||||||||||| |||||||||||||||||||    
T  38576283 gattaaataaaattgatggttgagatttggtgtcaacga------atccgttgacacctggtgtcaacggatcctaact 38576355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 12468302 - 12468159
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtc 114  Q
    |||| ||||| ||||||||| | ||| || |||| ||||||  ||||||||||||| ||| ||||||||||||||| || | ||||||||| | ||||||    
T  12468302 tttgagtatgagttcggggttggtacctacatcc-cattacatgtctcgtacccgtgtttcgaaatcgaggaaaacccaaattcatactca-aaccagtc 12468205  T
Q  115 aaatcggagaaaatccgtcaaatcggggttggtttgggcgagtaccc 161  Q
    ||| ||||| ||| || |||||| ||| ||||||  |||||||||||    
T  12468204 aaaacggag-aaacccatcaaattgggtttggttcaggcgagtaccc 12468159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 14507321 - 14507158
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||  | ||||||||| | ||||| ||||||  ||| ||||||||| || |||||      
T  14507321 cattcgggtagg-tttgggt--gggttcggggtggatacatatatcacctttacccgtcccatacccatattttataattgaggaaaacccaaactca-- 14507227  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
              ||||||||||| |||| |||||||||  ||||||||||||||| | ||||| | |||||| ||||||||    
T  14507226 ----------gtcaaatcggaaaaaacccgtcaaattagggttggtttgggcgggcacccatgggcacggattttgttg 14507158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 17469256 - 17469334
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||||||||||||| ||||||| ||| ||||| | | ||||||||| | ||||||| ||||||||||| |||||||    
T  17469256 gggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 17469334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 24870111 - 24869986
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||| |||||||| ||||||||| ||| ||||| | | ||||||||| | ||||||| |||| |||||| ||||||||||||  ||||| || |  ||    
T  24870111 gggtttaggtatgggctcggggtgggtacctatatacccgttacccgtcacatacccgtgttttaaaatcggggaaaactcatagccatacccaaattca 24870012  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| |||  |||| |||||||||    
T  24870011 gtcaaaacgggaaaaacccgtcaaat 24869986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 2075861 - 2075785
Alignment:
Q  72 ttttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    |||||| |||| | ||||| ||||| ||||| || ||||||||||| ||||||||||||||||||| ||| ||||||    
T  2075861 ttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaatccgtcaaattgggtttggtt 2075785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 14687402 - 14687478
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    |||||||||||||||||||||||||||||||||||   || | |||| | |||| || ||||||||||| |||||||    
T  14687402 gtttgggtatgggttcggggtggatacatatatccctgtttctcgtcccatacctgtgttttgaaatcggggaaaac 14687478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 1012622 - 1012744
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagt 113  Q
    ||||||||||||||||||||||| ||| ||||| | ||||||||||| | ||| | | |||| |||||| ||||||| || |||||||| || || || |    
T  1012622 gtttgggtatgggttcggggtgggtacctatatacccattacccgtcccatactcatgtttt-aaatcggggaaaacccaaactcatacccaaactcaat 1012720  T
Q  114 caaatcggagaaaatccgtcaaat 137  Q
    |||| ||  ||||| |||||||||    
T  1012721 caaaacgaggaaaacccgtcaaat 1012744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 14825681 - 14825642
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  14825681 caacgaatccgttgacacctagtgtcaacggatcctaact 14825642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 24189531 - 24189578
Alignment:
Q  34 tggatacatatatcctcattacccgtctcgtacccgtattttgaaatc 81  Q
    ||||||||||||||||||||| ||||||||||||||| |||| |||||    
T  24189531 tggatacatatatcctcattatccgtctcgtacccgtgttttaaaatc 24189578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 29416263 - 29416149
Alignment:
Q  22 atgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcgg 121  Q
    ||||||||||||||| ||||||||||||| |||||| ||   ||| ||| |||| |||| ||| |||| ||| |||||||| || || |||||||| |||    
T  29416263 atgggttcggggtgggtacatatatcctcgttacccatcctttactcgtgtttt-aaatagagaaaaagtcaaactcatacccaaactcagtcaaaacgg 29416165  T
Q  122 agaaaatccgtcaaat 137  Q
     ||||| |||||||||    
T  29416164 ggaaaacccgtcaaat 29416149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 432 - 471
Target Start/End: Original strand, 40304610 - 40304649
Alignment:
Q  432 agtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  40304610 agtaggtgtagcttgctaacttgcaccttagtgtttttag 40304649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 9642430 - 9642360
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||||||||| |||||| ||||| || | ||||||||| | ||||||| ||||||||||| |||||||    
T  9642430 gtatgggttcgggatggatatatataaccccgttacccgtcccatacccgtgttttgaaatcggggaaaac 9642360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 17084194 - 17084124
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    |||||||| |||| ||||||||||| ||  ||||||| | ||||||||||||||||||| |||| ||||||    
T  17084194 gggtttggatatgagttcggggtgggtatctatatccccgttacccgtctcgtacccgtgttttaaaatcg 17084124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 8031129 - 8031170
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacata 43  Q
    ||||||||||||||||||||||||||||| ||||| ||||||    
T  8031129 cattcgggtagggtttgggtatgggttcgaggtgggtacata 8031170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 29918608 - 29918713
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| |||||| |||||||||| |||||||||| |  ||||||||   ||||  || ||||||||||| | |||||||| |||||||| || | |||    
T  29918608 gggtttgtgtatggtttcggggtgggtacatatatctttgttacccgttctgtacatgtgttttgaaatcgggaaaaactcaaactcatacccaaaacca 29918707  T
Q  112 gtcaaa 117  Q
    ||||||    
T  29918708 gtcaaa 29918713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 43113710 - 43113577
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtc 114  Q
    |||||||||| ||||||||||| ||| ||||| |   ||||||||| | | ||||| ||||||||||| | ||||| ||  ||||||| || ||||||||    
T  43113710 tttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatcgggaaaaacccaatctcatacgcaaacccagtc 43113611  T
Q  115 aaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    ||| | | ||||| |||| |||| ||| ||||||    
T  43113610 aaagcagggaaaacccgttaaattgggtttggtt 43113577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 4230757 - 4230649
Alignment:
Q  72 ttttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgg 171  Q
    |||||| |||| ||||||| ||||| ||||| || |||||||||||  || ||||| ||||||||| ||| |||||| ||||| ||| |||| || | ||    
T  4230757 ttttgagatcggggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacatgtatgg 4230658  T
Q  172 gttttgttg 180  Q
     ||||||||    
T  4230657 attttgttg 4230649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 27056634 - 27056474
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    ||||||||||||||||| || ||||| || | ||||||||| | |||| ||| |||||||||| | ||||| || || ||||  || |||||| |||| |    
T  27056634 gtatgggttcggggtgggtagatataaccccgttacccgtcccatacctgtactttgaaatcgggaaaaacccaaacccataaccaaacccagccaaagc 27056535  T
Q  120 ggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |  ||||| ||||||||||| | |  || ||||||  |||||||| | |||||| ||||||    
T  27056534 gaggaaaacccgtcaaatcgagatgagtatgggcggatacccacgaggacgggtattgttg 27056474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 27441504 - 27441468
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    |||||||||||||||||||| ||||||||||||||||    
T  27441504 caacgaattcgttgacacctggtgtcaacggatccta 27441468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 28345494 - 28345562
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||||||||||||||||||||| | | ||||||||| |||||| ||  |||||||| ||||| |||||    
T  28345494 gtttgggtatgggttcggggtgggtgcctatatcctcgttacccatcctgtacccgtgttttggaatcg 28345562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 35215555 - 35215670
Alignment:
Q  30 ggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatc 129  Q
    ||||||| ||| ||||| ||| ||||||||||| ||||||| ||||||||||| ||||||| || | |||||| || |||| |||||| |||  |||| |    
T  35215555 ggggtgggtacctatatactcgttacccgtctcatacccgtgttttgaaatcg-ggaaaacccaaaatcatacccaaacccggtcaaaacgggaaaaacc 35215653  T
Q  130 cgtcaaatcggggttgg 146  Q
     ||||||| ||| ||||    
T  35215654 ggtcaaattgggtttgg 35215670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 3043979 - 3044018
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  3043979 caacgaattcgttgacacctggtgtcgacggatcctaact 3044018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 471
Target Start/End: Complemental strand, 9479008 - 9478973
Alignment:
Q  436 ggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||||||||||||||||| |||||||||||||||||    
T  9479008 ggtgtagcttgctaacttgcaccttagtgtttttag 9478973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 11686978 - 11687017
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  11686978 caacgaattcgttgacaccaggtgtcaacggatcctaact 11687017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 31602054 - 31602015
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  31602054 caacgaattcgttgacacctggtgtcaaccgatcctaact 31602015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 39379664 - 39379575
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactca 105  Q
    ||||| ||||| ||||||| ||| ||| | ||||||||||||||||| ||||||||| |||||| |||| ||||||| ||||| || |||||    
T  39379664 gtttgagtatgagttcggg-tgggtacttttatcctcattacccgtcccgtacccgtgttttgagatcg-ggaaaacccatacccaaactca 39379575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 436 - 470
Target Start/End: Complemental strand, 1565850 - 1565816
Alignment:
Q  436 ggtgtagcttgctaacttacaccttagtgttttta 470  Q
    |||||||||||||||||| ||||||||||||||||    
T  1565850 ggtgtagcttgctaacttgcaccttagtgttttta 1565816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 2189944 - 2189910
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtgg 36  Q
    ||||||||||||||||| |||||||||||||||||    
T  2189944 cattcgggtagggtttgagtatgggttcggggtgg 2189910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 26652330 - 26652296
Alignment:
Q  275 aacgaattcgttgacacctagtgtcaacggatcct 309  Q
    ||||||||||||||||||| |||||||||||||||    
T  26652330 aacgaattcgttgacacctggtgtcaacggatcct 26652296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 5700347 - 5700436
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaact 91  Q
    ||||||||  || |||||||||||||||| ||||| ||  ||||||| | ||||| ||||| |||| || ||||||||||| | ||||||    
T  5700347 cattcgggatggatttgggtatgggttcgaggtgggtatctatatccccgttaccagtctcatacctgtgttttgaaatcgggaaaaact 5700436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 14186321 - 14186402
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactca 93  Q
    |||||||||||||||||| |||||  ||| |||||   | |||||| || | ||||||| ||||||||||||| ||||||||    
T  14186321 gggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgagaaaaactca 14186402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 37961049 - 37960944
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||| ||||||||||  ||| ||||| |   ||||| ||| | ||||||| |||| |||||| ||||||| || |||||||| || ||| |    
T  37961049 gggtttgggtatgagttcggggtgtgtacctatatacctgttacctgtcccatacccgtgtttttaaatcggggaaaacccaaactcatacccaaaccta 37960950  T
Q  112 gtcaaa 117  Q
    ||||||    
T  37960949 gtcaaa 37960944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 1566081 - 1566121
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| |||| ||||||||||||| |||||||||||||||||    
T  1566081 aagtgggtgcagcttgctaacttgcaccttagtgtttttag 1566121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 3469256 - 3469296
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||| |||||||||||||||||||| |||||||    
T  3469256 aagtgggtgtaggttgctaacttacaccttagtatttttag 3469296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 9197133 - 9197101
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggat 306  Q
    |||||||||||||||||||| ||||||||||||    
T  9197133 caacgaattcgttgacacctggtgtcaacggat 9197101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 9476110 - 9476030
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||||||  ||||||||||||||||||| ||||| ||  ||||||| | ||||  ||| |||| |||| |||||||||||    
T  9476110 cattcgggatgggtttgggtatgggttcgaggtgggtatttatatccccgttacttgtcccgtatccgttttttgaaatcg 9476030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 247 - 275
Target Start/End: Original strand, 37025739 - 37025767
Alignment:
Q  247 ttgatggttgagatttggtgtcaacgaca 275  Q
    |||||||||||||||||||||||||||||    
T  37025739 ttgatggttgagatttggtgtcaacgaca 37025767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 42906864 - 42906824
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||| |||||||||||||||||||| |||||||    
T  42906864 aagtgggtgtaggttgctaacttacaccttagtatttttag 42906824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 3e-55; HSPs: 94)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 2 - 187
Target Start/End: Original strand, 27063134 - 27063319
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||| | ||| |||||  ||||||||||||||||||||||||||||||| |||||||    
T  27063134 cattcgggtagggtttgggtatgagttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaaactcata 27063233  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    | || ||||||||||||| | |||||||||||||||||||||||||||||| | ||||||| | ||||| ||||||||||| ||||    
T  27063234 cccaaacccagtcaaatcagggaaaatccgtcaaatcggggttggtttgggagggtacccatgggcacgagttttgttgtcatgcc 27063319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 30839231 - 30839045
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||||||| |||||||| ||| ||||||||| ||||||||||||| | |||| |||| | ||||||||||||||||||  |||||||||| |||||||    
T  30839231 cattcgggtaaggtttgggcatgagttcggggtagatacatatatccacgttactcgtcccatacccgtattttgaaatcagggaaaactcaaactcata 30839132  T
Q  102 ctcagacccagtcaaatcgg-agaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    | || ||||||||||||||| |||||| |||||||||||||||||||||| ||| |||| || |  |||||||||||||||| ||||    
T  30839131 cccaaacccagtcaaatcggaagaaaacccgtcaaatcggggttggtttgagcgggtactcatggacacgggttttgttgtcatgcc 30839045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 27063330 - 27063508
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||| | | ||||||||| |||||||||||| | |||||| |||||||  | || ||||    
T  27063330 cattcgggtagggttggggtatgagttcggggtgggtacatatattcccgttacccgtcccgtacccgtattattaaatcggggaaaaccgagacccata 27063429  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    | || |||||||||||| ||  |||||||||||||||||||||||||||||||  || ||| | |||||||||||||||    
T  27063430 cccaaacccagtcaaattgggaaaaatccgtcaaatcggggttggtttgggcggttatccatgggcacgggttttgttg 27063508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 22973384 - 22973503
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||| |||||||||||||||||||||| ||||| |||| |||||| ||||||||||| ||||||||||||||||||||| ||||||| || || ||||    
T  22973384 cattcgagtagggtttgggtatgggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcgtggaaaacccaaacccata 22973483  T
Q  102 ctcagacccagtcaaatcgg 121  Q
    | || |||||||||||||||    
T  22973484 cccaaacccagtcaaatcgg 22973503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 31426004 - 31426183
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||| |||||| ||||||| || ||  |||    
T  31426004 cattcgggtagggtttgggtatgcgttcggggtggatacatatatccccgttacccgtctcatacccgtatttttaaatcggggaaaacccaaaccaata 31426103  T
Q  102 ctcagacccagtcaaatcg-gagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |  | |||||||||||| |  | |||| ||||||||||| ||||||||||| ||  |||| | |  ||||||||||||||    
T  31426104 ccaaaacccagtcaaattgaaaaaaaacccgtcaaatcgaggttggtttggacggatacctatgaacacgggttttgttg 31426183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 18683970 - 18684089
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||| ||||||||||||||||||||| ||||||| |  || ||||    
T  18683970 cattcgggtagggtttgggtatgggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaacccgaacccata 18684069  T
Q  102 ctcagacccagtcaaatcgg 121  Q
    | || ||| |||||||||||    
T  18684070 cccaaacctagtcaaatcgg 18684089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 29157349 - 29157527
Alignment:
Q  6 cgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccg--tattttgaaatcgaggaaaactcatactcatact 103  Q
    ||||||||||||||||| |||||  |||||||||||||||||| | ||||||||||| ||||||  |||| |||||||| ||||||  || |  |||||     
T  29157349 cgggtagggtttgggtacgggtttagggtggatacatatatccccgttacccgtctcatacccgtatattatgaaatcggggaaaatccaaaaccatacc 29157448  T
Q  104 cagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtc 182  Q
    || |||| ||||||| || ||||| |||||||||||| |||||||||| || |||||||   |||||||||||||||||    
T  29157449 caaaccctgtcaaattggtgaaaacccgtcaaatcggagttggtttggacgggtacccattggcacgggttttgttgtc 29157527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 37103224 - 37103046
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||||||||||||||| |||| ||||||| ||| | ||||||||||| |||||| || ||||||||||||||||||||  | ||||| || ||| |||    
T  37103224 cattcgggtagggtttggatatgtgttcgggatgggtgcatatatcctcgttacccttcccgtacccgtattttgaaatcaggaaaaacacaaacttata 37103125  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
      || ||||| ||||||||||||| ||||||||||| || ||||||||| ||| |||| ||    ||||||||||||||    
T  37103124 tccaaacccaatcaaatcggagaagatccgtcaaattggagttggtttgagcgggtactcatagacacgggttttgttg 37103046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 42908102 - 42907986
Alignment:
Q  38 tacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaat 137  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| ||||||| || |||||||| || ||||| |||||| ||  |||| |||||||||    
T  42908102 tacatatatccccattacccgtcccgtacccgtattttgaaatcggggaaaacccaaactcatacccaaacccaatcaaattgggaaaaaaccgtcaaat 42908003  T
Q  138 cggggttggtttgggcg 154  Q
    || ||||||||||||||    
T  42908002 cgaggttggtttgggcg 42907986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 44845232 - 44845082
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||||| |||||||| ||||||||||||||||| || |||||||||||||| ||||| |||||||||||| |||||||| ||||||| || || ||||    
T  44845232 cattcgggcagggtttgtgtatgggttcggggtgggtaaatatatcctcattaaccgtcccgtacccgtattatgaaatcggggaaaacccaaacccata 44845133  T
Q  102 ctcagacccagtcaaatcgg--agaaaatccgtcaaatcggggttggtttg 150  Q
    |  | || |||||||| |||  | ||||||||||||||||| ||| |||||    
T  44845132 ccaaaactcagtcaaaacggaaaaaaaatccgtcaaatcggagttcgtttg 44845082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 45885845 - 45885684
Alignment:
Q  19 ggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaat 118  Q
    |||||||||||||||||| ||| ||||| ||  ||||||||| | ||||||| |||||| |||| ||||||||||||| ||||| || |||||||||||     
T  45885845 ggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgagatcggggaaaactcatacccatacccaaacccagtcaaaa 45885746  T
Q  119 cggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||||||| |||| |||| ||| |||||| | ||| ||| ||||| | | |||||||||||    
T  45885745 cggagaaaacccgttaaattgggtttggttcgagcgggtaaccacgggtatgggttttgttg 45885684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 21702665 - 21702833
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||| ||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||| ||||||| ||||||||||| || |||||    
T  21702665 gggttggggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatactcatacccaaaccca 21702764  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| |||  |||||||||||||| ||| |||||| ||||| ||| |||||   | |||||||||||    
T  21702765 gtcaaaacgggaaaaatccgtcaaattgggtttggttcgggcgggtaaccacggatatgggttttgttg 21702833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 32546188 - 32546268
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||  |||||||||||||||||||||    
T  32546188 cattcgggtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatcg 32546268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 10072477 - 10072640
Alignment:
Q  17 tgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaa 116  Q
    |||||||||||||||||||| ||| ||||| | | ||||||||  | ||||||| ||||||||||| ||||||| ||||| ||||| || ||||||||||    
T  10072477 tgggtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaa 10072576  T
Q  117 atcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    | ||| ||||| ||||||||| ||| |||||| ||||| ||| || || | | |||||||||||    
T  10072577 aacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttg 10072640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 38139879 - 38139737
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||| |||||||||||||||| ||| ||||| ||||||||||||| | ||| ||| ||||||||| | ||||||| ||||| ||||  || |||||    
T  38139879 gggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaattggggaaaacccatacccatatccaaaccca 38139780  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    |||||| ||| |||||||| |||||| ||| |||||| |||||    
T  38139779 gtcaaaacggggaaaatccatcaaattgggtttggttcgggcg 38139737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 7780014 - 7780139
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||||| |||||||||||| ||| ||||| | ||||| ||||| | ||||||| |||||| |||| ||||||| ||||| ||||| || |||||    
T  7780014 gggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccca 7780113  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| ||| |||||||||||||||    
T  7780114 gtcaaaacggggaaaatccgtcaaat 7780139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 30650640 - 30650789
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtc 114  Q
    |||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| |||||| || | ||||||||||||| |||||  | ||||||||    
T  30650640 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagattggggaaaactcatacccatacctaaacccagtc 30650739  T
Q  115 aaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    ||| ||| ||||| ||||||||| ||| |||||| ||||| ||| |||||    
T  30650740 aaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacg 30650789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 39317006 - 39317143
Alignment:
Q  17 tgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaa 116  Q
    |||||||| |||| || ||||||||||||| | |  |||||||| | ||||||| ||||||||||||||||||||||||||||||  || ||||||||||    
T  39317006 tgggtatgagttcaggatggatacatatatacccgctacccgtcccatacccgtgttttgaaatcgaggaaaactcatactcatatccaaacccagtcaa 39317105  T
Q  117 atcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    | ||| ||||| ||||||||| | | |||||| |||||    
T  39317106 aacggggaaaacccgtcaaattgagtttggttcgggcg 39317143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 16866175 - 16866327
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | |||| |||| | ||||||| |||||| |||| ||||||| ||||| ||||  || |||||    
T  16866175 gggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaaccca 16866274  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    |||||| ||| ||||| ||||||||| ||| |||||| ||||| ||| |||||    
T  16866275 gtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacg 16866327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 164
Target Start/End: Complemental strand, 18125315 - 18125163
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||| ||||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||| | ||||| ||||||||||| || |||||    
T  18125315 gggtttgggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccatactcatacacaaaccca 18125216  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    |||||| ||| ||||| ||||||||| ||  |||||| ||||||||| |||||    
T  18125215 gtcaaaacggggaaaacccgtcaaattggatttggttcgggcgagtaaccacg 18125163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 35074476 - 35074644
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||| ||| ||| ||||| | | ||||||||| | ||||||| |||| | |||| ||||||| ||||| ||||| || |||||    
T  35074476 gggtttgggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaagatcggggaaaacccatacccatacccaaaccca 35074575  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||| ||||| ||| ||| |||||| ||||| ||| ||||| | | |||||||||||    
T  35074576 gtcaaaacggggaaaacccgtctaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 35074644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 28309488 - 28309567
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatc 81  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| | | ||||||||| ||||||||||||||||||||    
T  28309488 cattcgggtagggtttgggtatgagttcggggtagatacatatattcccgttacccgtcccgtacccgtattttgaaatc 28309567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 8906667 - 8906526
Alignment:
Q  21 tatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcg 120  Q
    |||||||||||||||| |||||||| || | |||  |||||| ||| ||| |||||||||||  ||||||||| || ||||| || | ||| ||||| ||    
T  8906667 tatgggttcggggtgggtacatataaccccgttattcgtctcatactcgtgttttgaaatcggagaaaactcaaacccatacccaaatccaatcaaagcg 8906568  T
Q  121 gagaaaatccgtcaaatcggggttggtttgggcgagtaccca 162  Q
    ||||||| |||||||||||| || |||||||||| |||||||    
T  8906567 gagaaaacccgtcaaatcggagtgggtttgggcgggtaccca 8906526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 5022603 - 5022737
Alignment:
Q  13 ggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccag 112  Q
    |||||| |||||  |||| ||||| ||| |||||||  | ||||  |||| ||||||||||||||||| | |||||||||| ||||||||| | ||| ||    
T  5022603 ggtttgagtatgaattcgaggtgggtacttatatccctactacctatctcatacccgtattttgaaattggggaaaactcaaactcatactga-acctag 5022701  T
Q  113 tcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    ||||||| ||||||| ||||||||||||||||||||    
T  5022702 tcaaatcagagaaaacccgtcaaatcggggttggtt 5022737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 5565389 - 5565219
Alignment:
Q  17 tgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaa 116  Q
    |||||||||||| ||||||| |||||||| || | |||||| || | || ||||| |||||||||  ||||||| || ||  |||  || | ||||||||    
T  5565389 tgggtatgggttaggggtgggtacatataaccccgttacccatcccatatccgtactttgaaatcagggaaaacccaaacctataaccaaatccagtcaa 5565290  T
Q  117 atcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    | ||| ||||||||||||||||||||| ||| |||||| ||||||| | | |||||| |||||||| ||||    
T  5565289 agcggggaaaatccgtcaaatcggggtgggtatgggcgggtacccatggggacgggtattgttgtcatgcc 5565219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 12980383 - 12980488
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | ||||||||||| | ||||||| ||||||||||| |||||||  | || ||||| || |||||    
T  12980383 gggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaaccaaaacccatacccaaaccca 12980482  T
Q  112 gtcaaa 117  Q
    ||||||    
T  12980483 gtcaaa 12980488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 3227025 - 3226897
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    ||||||||||||||||| ||| ||||| |   ||||||||| | ||||||| ||||||||||| ||||||| ||||| |||||||| || |||| ||| |    
T  3227025 gtatgggttcggggtgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatactcaaactcagttaaaac 3226926  T
Q  120 ggagaaaatccgtcaaatcggggttggtt 148  Q
    |  ||||||||||||||| ||| ||||||    
T  3226925 gaggaaaatccgtcaaattgggtttggtt 3226897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 17885471 - 17885639
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||||||||||||| |  || ||||| | | ||||||||| | ||||| | |||| |||||| ||||||| ||||| |||| ||| |||||    
T  17885471 gggtatgggtatgggttcggggttggaacctatatacccgttacccgtcccatacccatgttttaaaatcggggaaaacccatacccatattcaaaccca 17885570  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||| ||||||||| ||| |||||| ||||  ||| ||||| | | |||||||||||    
T  17885571 gtcaaaacggggaaaacccgtcaaattgggtttggttcgggcaggtaaccacgggtatgggttttgttg 17885639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 5377094 - 5377216
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtc 114  Q
    |||||||||||||||||||||| ||| ||||| | | ||||||||| | |||| || ||||||||||| ||||||| || |||||||||||  |||| ||    
T  5377094 tttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatcggggaaaacccaaactcatactcaaccccaatc 5377193  T
Q  115 aaatcggagaaaatccgtcaaat 137  Q
    ||| |||  ||||||||| ||||    
T  5377194 aaaacgggaaaaatccgttaaat 5377216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 33841092 - 33841233
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    ||||||||||||||||  |||||||| ||   ||||||||| | ||||||| ||||||||||| |||||||||| | ||||||||| | ||||||||| |    
T  33841092 gtatgggttcggggtgagtacatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaactcaaattcatactca-aaccagtcaaagc 33841190  T
Q  120 ggagaaaatccgtcaaatcggggttggtttgggcgagtaccca 162  Q
    ||  |||| |||||||||||  || |||||||| | |||||||    
T  33841191 gggaaaaacccgtcaaatcgatgtgggtttgggtgggtaccca 33841233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 45380115 - 45380248
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagt 113  Q
    |||| |||||||||||||||||| ||| ||||| | | ||||||||| | ||||||||||||||||||| | ||||| ||||| ||||  || |||||||    
T  45380115 gtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaacccatacccatatccaaacccagt 45380214  T
Q  114 caaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    |||| | | ||||| ||||||||| ||| ||||||    
T  45380215 caaaacagggaaaa-ccgtcaaattgggtttggtt 45380248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 17851860 - 17852026
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||| ||| ||| |||||   | ||||||||| | ||||||| ||  ||  ||| ||||||| ||||| ||||| || |||||    
T  17851860 gggtttgggtatgggttcgggatgggtacctatatatccgttacccgtcccatacccgtgttaaga--tcggggaaaacccatacccatacccaaaccca 17851957  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| |||||||||||| |||||| ||| |||||| ||||| ||| ||||  | | |||||||||||    
T  17851958 gtcaaaacggagaaaatccatcaaattgggtttggttcgggcgggtaaccacaagtatgggttttgttg 17852026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 43507458 - 43507587
Alignment:
Q  19 ggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaat 118  Q
    ||||||||||| |||||| | | ||||| | | ||||||||||| ||||| | ||||||||||| ||||||| |||||| |||| || |||||||||||     
T  43507458 ggtatgggttcagggtgggtgcctatatacccgttacccgtctcatacccatgttttgaaatcggggaaaacccatacttatacccaaacccagtcaaaa 43507557  T
Q  119 cggagaaaatccgtcaaatcggggttggtt 148  Q
    ||| ||||| || |||||| ||| ||||||    
T  43507558 cggggaaaacccatcaaattgggtttggtt 43507587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 21750779 - 21750858
Alignment:
Q  3 attcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||| |||||||||||||||| ||||| ||||| ||||||||||| | | ||||||||| || ||||||||||||||||    
T  21750779 attcgagtagggtttgggtatgagttcgaggtgggtacatatatccccgtcacccgtctcatatccgtattttgaaatcg 21750858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 29015052 - 29014930
Alignment:
Q  5 tcgggtagggtttgggtatgggttcggggtggatacatatat------cctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactc 98  Q
    |||||||||||||| |||||||||||||||||||| ||||||      || |  || ||||| ||||||||||||||||||||| | |||||||| ||||    
T  29015052 tcgggtagggtttgagtatgggttcggggtggatatatatatatatatccccgctatccgtcccgtacccgtattttgaaatcgggaaaaactcaaactc 29014953  T
Q  99 atactcagacccagtcaaatcgg 121  Q
    ||||  | ||||| |||||||||    
T  29014952 atacctaaacccaatcaaatcgg 29014930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 44734436 - 44734304
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    ||||||||||||||||| ||| ||||| | ||||||| ||| | ||||||| ||||||||||||| ||||| ||||| ||| | || |||||||||||      
T  44734436 gtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgttttgaaatcgagaaaaacacatacacattcccaaacccagtcaaa-- 44734339  T
Q  120 ggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
     | ||||| ||||||||| ||| |||||| |||||    
T  44734338 agggaaaacccgtcaaattgggtttggttcgggcg 44734304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 38152893 - 38153034
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||| |||||||||||||||||| ||| |||||   | ||| ||||  | ||||| | ||||||||||| ||||||| ||||| ||||| || |||||    
T  38152893 gggtttaggtatgggttcggggtgggtacctatatagccgttatccgttccatacccatgttttgaaatcggggaaaacccatacccatacccaaaccca 38152992  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    |||||| ||| ||||||||||||||| | | |||||| |||||    
T  38152993 gtcaaaacgg-gaaaatccgtcaaattgagtttggttcgggcg 38153034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 39456089 - 39455960
Alignment:
Q  25 ggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggaga 124  Q
    |||||||||||| ||| ||||| | | ||||||||| | ||||| | ||||||||||| ||||||| ||||  ||||| || ||||||||||| ||| ||    
T  39456089 ggttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccatatccatacccaaacccagtcaaaacgggga 39455990  T
Q  125 aaatccgtcaaatcggggttggtttgggcg 154  Q
    |||  |||||||| ||| |||||| |||||    
T  39455989 aaactcgtcaaattgggtttggttcgggcg 39455960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 25342567 - 25342495
Alignment:
Q  235 gattaaatgagattgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| | ||||||||||||||||||||||||||||      || ||||||||||| |||||||||||||||||||    
T  25342567 gattaaataaaattgatggttgagatttggtgtcaacga------atccgttgacacctggtgtcaacggatcctaact 25342495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 25343373 - 25343301
Alignment:
Q  235 gattaaatgagattgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| | ||||||||||||||||||||||||||||      || ||||||||||| |||||||||||||||||||    
T  25343373 gattaaataaaattgatggttgagatttggtgtcaacga------atccgttgacacctggtgtcaacggatcctaact 25343301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 27850423 - 27850267
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||  ||||||||||||||||||||| ||| ||| ||||  | | ||||||||| | ||||||| ||||||||||| |||||      || ||||    
T  27850423 cattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcggggaaa------acccata 27850330  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    | || ||||| ||||| ||| ||||| ||||||||| ||| |||||| ||||| ||| |||||    
T  27850329 cccaaacccaatcaaaacggggaaaaaccgtcaaattgggtttggttcgggcgggtaaccacg 27850267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 43218287 - 43218398
Alignment:
Q  10 tagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacc 109  Q
    ||||||||||||||| ||||||||||  ||||||||||  | ||||||||| || |||  |||| |||||| | ||||||| || || ||||| || |||    
T  43218287 tagggtttgggtatgagttcggggtgagtacatatatcgccgttacccgtcccgcacctatattatgaaattggggaaaacccaaacccatacccaaacc 43218386  T
Q  110 cagtcaaatcgg 121  Q
    ||||||||||||    
T  43218387 cagtcaaatcgg 43218398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 10990929 - 10990871
Alignment:
Q  31 gggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaa 89  Q
    |||||||||| |||||||  |||||||||| ||||||||||||||||||||| ||||||    
T  10990929 gggtggatacctatatccctattacccgtcccgtacccgtattttgaaatcggggaaaa 10990871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 18825959 - 18825881
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||||||| ||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||||||||||| |||||||    
T  18825959 gggtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 18825881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 3157089 - 3157237
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||||| ||||||| |||| ||| ||||||| | ||| ||||| | ||||| ||||||||||||| |||||||  | || ||||| || ||| |    
T  3157089 gggtttgggtataggttcggtgtgggtacctatatccccgttatccgtcccatacccatattttgaaatcggggaaaacctaaacccatacccaaaccaa 3157188  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtaccc 161  Q
    |||||| ||| ||||| ||| |||||  || |||||| ||||| ||||||    
T  3157189 gtcaaagcggggaaaa-ccgacaaattaggtttggttcgggcgggtaccc 3157237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 10995921 - 10995817
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||||||||||||||| || ||||| ||   ||||||||| | ||||||| | ||||||||| ||||||| || |||||||| |||||| |    
T  10995921 gggtatgggtatgggttcggggtgggtatatataaccctgttacccgtcccatacccgtgtcttgaaatcggggaaaacccaaactcatac-cagaccaa 10995823  T
Q  112 gtcaaa 117  Q
    ||||||    
T  10995822 gtcaaa 10995817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 24753210 - 24753294
Alignment:
Q  52 ttacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaat 137  Q
    ||||||||| | ||||||| |||||| |||| ||||||| ||||| ||||  || ||||||||||| |||||||||||||||||||    
T  24753210 ttacccgtcccatacccgtgttttgagatcg-ggaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaat 24753294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 23475360 - 23475280
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||||||  |||||||||||||||||||  |||| ||||||||||| |||||||| || |  |||||| |||||||||||    
T  23475360 cattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttgaaatcg 23475280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 23533688 - 23533613
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    |||||||||||||||||  |||| ||||||||||| |||||||| || | |||||||||||| |||||| |||||||    
T  23533688 gtttgggtatgggttcgaagtgggtacatatatcc-cattacccatcgcatacccgtattttcaaatcggggaaaac 23533613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 26622959 - 26623035
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||||||||||||||||||| ||| ||||| | |||||||| || | ||||||| ||||||||||  |||||||    
T  26622959 gtttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaaaac 26623035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 27948505 - 27948444
Alignment:
Q  246 attgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||| ||||||||||||||||||||||      |||||||||||||| |||||||||||||||||||    
T  27948505 attgaaggttgagatttggtgtcaacga------attcgttgacacctggtgtcaacggatcctaact 27948444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 37182321 - 37182405
Alignment:
Q  53 tacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaat 137  Q
    |||||||| | ||||||| ||||||| |||  |||||| ||||||||||| || ||||||||||| ||| ||||| |||||||||    
T  37182321 tacccgtcccatacccgtgttttgaattcggagaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaat 37182405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 19440107 - 19440016
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactca 93  Q
    ||||||||  |||||||||||||||||||  |||| ||||||||||| |||||||| || |  |||||| |||| |||||  ||||||||||    
T  19440107 cattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttcaaatcagggaaaactca 19440016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 473
Target Start/End: Complemental strand, 2658357 - 2658315
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttagtg 473  Q
    |||| ||||||||||||||| ||||||||||||||||||||||    
T  2658357 aagtgggtgtagcttgctaatttacaccttagtgtttttagtg 2658315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 21750877 - 21750946
Alignment:
Q  113 tcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtc 182  Q
    |||||||||| |||| |||||||||||| |||| |||||||| ||||||| |  ||||| ||||||||||    
T  21750877 tcaaatcggaaaaaacccgtcaaatcggagttgatttgggcgggtacccatggacacggattttgttgtc 21750946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 205 - 309
Target Start/End: Original strand, 25343191 - 25343289
Alignment:
Q  205 atagaaacatgaactaattataagtcattagattaaatgagattgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacgg 304  Q
    ||||||| ||| | |||||| ||| | || |||||||  | ||||||||||||||||||||||      |||||||||| ||||||||| ||||||||||    
T  25343191 atagaaatatggattaattacaagccttttgattaaaaaaaattgatggttgagatttggtgt------caacgaattcattgacacctggtgtcaacgg 25343284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 41103670 - 41103784
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    ||||||||||||||||| ||| ||||| | | ||| ||||| | ||||||| ||||||||||| |||||      || ||||| || ||||||||||| |    
T  41103670 gtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcggggaaa------acccatacccacacccagtcaaaac 41103763  T
Q  120 ggagaaaatccgtcaaatcgg 140  Q
    ||  |||||||||||||||||    
T  41103764 gggaaaaatccgtcaaatcgg 41103784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 44658502 - 44658429
Alignment:
Q  64 tacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaat 137  Q
    ||||||| ||||||||||| | ||||||||||| ||||| || ||||||||||| ||  ||||| |||||||||    
T  44658502 tacccgtgttttgaaatcgggaaaaactcatacccatacccaaacccagtcaaaacgaggaaaacccgtcaaat 44658429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 1417645 - 1417609
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    |||||||||||||||||||| ||||||||||||||||    
T  1417645 caacgaattcgttgacacctggtgtcaacggatccta 1417609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 3029213 - 3029249
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    |||||||||||||||||||| ||||||||||||||||    
T  3029213 caacgaattcgttgacacctggtgtcaacggatccta 3029249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 23657856 - 23657896
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  23657856 aagttggtgtagcttgctaacttgcaccttagtgtttttag 23657896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 25980001 - 25979921
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcata 95  Q
    |||||||||| ||| ||||||| |||||||||   | ||||||||||| |||| || ||||||||||| ||||||| ||||    
T  25980001 tttgggtatgagtttggggtgggtacatatatatccgttacccgtctcatacctgtgttttgaaatcggggaaaacccata 25979921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 30660652 - 30660591
Alignment:
Q  246 attgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| |||||||||||||||||||      || ||||||||||| |||||||||||||||||||    
T  30660652 attgatggatgagatttggtgtcaacga------atccgttgacacctggtgtcaacggatcctaact 30660591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 37950460 - 37950521
Alignment:
Q  246 attgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| |||||||||||||||||||      || ||||||||||| |||||||||||||||||||    
T  37950460 attgatggatgagatttggtgtcaacga------atccgttgacacctggtgtcaacggatcctaact 37950521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 38225990 - 38226026
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    |||||||||||||||||||| ||||||||||||||||    
T  38225990 caacgaattcgttgacacctggtgtcaacggatccta 38226026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 43439380 - 43439340
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  43439380 aagtagatgtagcttgctaatttacaccttagtgtttttag 43439340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 2472029 - 2472096
Alignment:
Q  52 ttacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    |||||||||| ||||||||||| ||||||||   |||||||| |||||||| || ||||| |||||||    
T  2472029 ttacccgtctagtacccgtattatgaaatcggaaaaaactcaaactcatacccaaacccaatcaaatc 2472096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 3219561 - 3219600
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  3219561 caacgaattcgttaacacctagtgttaacggatcctaact 3219600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 3772541 - 3772580
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  3772541 caacgaatacgttgacacctggtgtcaacggatcctaact 3772580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 40273597 - 40273558
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  40273597 caacgaattcattgacacctggtgtcaacggatcctaact 40273558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 44794113 - 44794051
Alignment:
Q  13 ggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttg 76  Q
    |||||||||||||||||||||||| ||| | ||| ||| ||||||||||| ||||||| |||||    
T  44794113 ggtttgggtatgggttcggggtgggtacct-tatactcgttacccgtctcatacccgtgttttg 44794051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 309
Target Start/End: Original strand, 46428832 - 46428867
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcct 309  Q
    |||||||||||||||||||| |||||||||||||||    
T  46428832 caacgaattcgttgacacctggtgtcaacggatcct 46428867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 2630670 - 2630521
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||  ||||||||||||||||||||||||| ||  ||||| | | | ||||||| | ||||| | |||| |||||| ||||||| || || ||||    
T  2630670 cattcgggacgggtttgggtatgggttcggggtgggtatctatatacccgtcacccgtcccatacccatgtttt-aaatcggggaaaacccaaacccata 2630572  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttggg 152  Q
    | || ||||||| |||  ||  ||||  |||||||| ||| ||||||||||    
T  2630571 cccaaacccagtaaaaatgggtaaaacacgtcaaattgggtttggtttggg 2630521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 5930572 - 5930534
Alignment:
Q  235 gattaaatgagattgatggttgagatttggtgtcaacga 273  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  5930572 gattaaatgagatagatggttaagatttggtgtcaacga 5930534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Complemental strand, 24790848 - 24790818
Alignment:
Q  441 agcttgctaacttacaccttagtgtttttag 471  Q
    |||||||||||||||||||||||||||||||    
T  24790848 agcttgctaacttacaccttagtgtttttag 24790818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 25905637 - 25905802
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagt 113  Q
    ||||||||||| ||||||||||| ||| ||| | | | ||||||||| | |||| || |||||| || | ||||||| ||||| ||||| || |||||||    
T  25905637 gtttgggtatgagttcggggtgg-tacctatgtacccgttacccgtcccatacctgtgttttgagattggggaaaacccatacccatacccaaacccagt 25905735  T
Q  114 caaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||  || ||||| | ||||||| ||| || ||| | ||| ||| ||||| | | |||||||||||    
T  25905736 caaaaaggggaaaacctgtcaaattgggtttagttcgagcgggtaaccacgggtatgggttttgttg 25905802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 313
Target Start/End: Original strand, 37395515 - 37395553
Alignment:
Q  275 aacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  37395515 aacgaatccgttgacacctggtgtcaacggatcctaact 37395553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 41741493 - 41741447
Alignment:
Q  56 ccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatac 102  Q
    ||||||| ||||||| ||||||||||| ||||||| |||||||||||    
T  41741493 ccgtctcatacccgtgttttgaaatcggggaaaacccatactcatac 41741447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 3774078 - 3774127
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgt 64  Q
    |||| |||||||||| |||||| ||| ||||||||| |||||||||||||    
T  3774078 tttgagtatgggttcagggtgggtacctatatcctcgttacccgtctcgt 3774127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 22973494 - 22973543
Alignment:
Q  131 gtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||||||||||||||||||| || ||||||| | ||| |||||||||||    
T  22973494 gtcaaatcggggttggtttggacgggtacccatgggcatgggttttgttg 22973543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 24425469 - 24425542
Alignment:
Q  107 acccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||| ||||| ||||||||||||||||||| ||| |||||| ||||  ||| ||||||| | | |||||||||    
T  24425469 acccaatcaaaacggagaaaatccgtcaaattgggtttggttcgggctggtaaccacgtgtatgagttttgttg 24425542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 471
Target Start/End: Original strand, 24623463 - 24623504
Alignment:
Q  430 gaagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||||||||||| |||||||| ||||||| ||||||||||||    
T  24623463 gaagtaggtgtaacttgctaatttacaccatagtgtttttag 24623504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 37218051 - 37218136
Alignment:
Q  52 ttacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaat 137  Q
    ||||||||| |||||| || ||||||||| |   |||||||| |||||||| || ||||||||||| ||| ||||| || ||||||    
T  37218051 ttacccgtcccgtacctgtgttttgaaataggataaaactcaaactcatacccaaacccagtcaaaacggggaaaacccatcaaat 37218136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 40274643 - 40274684
Alignment:
Q  232 ttagattaaatgagattgatggttgagatttggtgtcaacga 273  Q
    ||||||||||| | |||||||||||||||| |||||||||||    
T  40274643 ttagattaaataaaattgatggttgagattcggtgtcaacga 40274684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 43218389 - 43218433
Alignment:
Q  131 gtcaaatcggggttggtttgggcgagtacccacgtgcacgggtttt 176  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||    
T  43218389 gtcaaatcggggttggtttgggcg-gtacccatgggcacgggtttt 43218433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 2471991 - 2472019
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcg 30  Q
    |||||||||||||||||||||||||||||    
T  2471991 cattcgggtagggtttgggtatgggttcg 2472019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 9963852 - 9963812
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    ||||||||| |||||||| |||| |||||||||||||||||    
T  9963852 aagtaggtgcagcttgctgacttgcaccttagtgtttttag 9963812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 14305123 - 14305091
Alignment:
Q  278 gaattcgttgacacctagtgtcaacggatccta 310  Q
    |||| ||||||||||||||||||||||||||||    
T  14305123 gaatccgttgacacctagtgtcaacggatccta 14305091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 18684080 - 18684124
Alignment:
Q  131 gtcaaatcggggttggtttgggcgagtacccacgtgcacgggttt 175  Q
    |||||||||||||||||||||| | ||||||| | ||||||||||    
T  18684080 gtcaaatcggggttggtttgggtgggtacccatgggcacgggttt 18684124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 23901109 - 23901145
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  23901109 caacgaattcgttgacacctggtgtcaatggatccta 23901145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 26636875 - 26636915
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaactt 314  Q
    |||||||| ||||||||||| ||||||||||||||| ||||    
T  26636875 caacgaatccgttgacaccttgtgtcaacggatcctgactt 26636915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 33473807 - 33473847
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| |||||| |||||||| ||||||||||||||||||||    
T  33473807 aagtgggtgtaacttgctaatttacaccttagtgtttttag 33473847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 44985944 - 44985880
Alignment:
Q  73 tttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaat 137  Q
    ||||||||||  |||||| ||||  ||||| || ||||| ||||| |||||||||||||||||||    
T  44985944 tttgaaatcggagaaaacccatatccatacccaaacccaatcaaaacggagaaaatccgtcaaat 44985880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 48327453 - 48327521
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||| ||||| ||||| ||||||||| |||||||  ||||| | |  |||||||||||||||||||||    
T  48327453 gtttgagtatgtgttcgaggtggatacctatatcccaattactcataccgtacccgtattttgaaatcg 48327521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 2e-47; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 35069986 - 35069834
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||   |||||||||| ||||||||||| |||||||| |||||||||| |||||||    
T  35069986 cattcgggtagggtttgagtatgggttcggggtgggtacatatatccctgttacccgtcttgtacccgtattatgaaatcggggaaaactcaaactcata 35069887  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    | || | |||||||||| ||||||| |||||||||||||||||||||||||||    
T  35069886 cccaaatccagtcaaattggagaaactccgtcaaatcggggttggtttgggcg 35069834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 16237401 - 16237243
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||| | ||||||||||||||||||| ||||||| || | |||||    
T  16237401 cattcgggtagggtttgggtatgggttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaacccaaattcata 16237302  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacc 160  Q
      || || ||||||||| |||||||  || ||||||| |||||||||||| || |||||    
T  16237301 tccaaactcagtcaaattggagaaagcccatcaaatcagggttggtttggacgggtacc 16237243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 19003741 - 19003585
Alignment:
Q  24 gggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggag 123  Q
    ||||| ||||||||||||||||||| | ||| ||||| | ||||||||||||| ||||| ||||||| |  || ||||| || ||| ||||||||||| |    
T  19003741 gggtttggggtggatacatatatccccgttatccgtcccatacccgtattttgtaatcggggaaaacccgaacccatacccaaacctagtcaaatcgggg 19003642  T
Q  124 aaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||| ||||||||||||||||| |||||||| ||||||| | |||||||||||||||    
T  19003641 aaaacccgtcaaatcggggttgctttgggcgggtacccatgggcacgggttttgttg 19003585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 23058459 - 23058574
Alignment:
Q  3 attcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatac 102  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||| || ||||||||||||  ||||||||| || |||||    
T  23058459 attcgggtagggtttgggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaacccatac 23058558  T
Q  103 tcagacccagtcaaat 118  Q
    ||| ||||||||||||    
T  23058559 tcaaacccagtcaaat 23058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 49250860 - 49250735
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||| ||||||||| ||||| | ||||||||||| | ||||||| |||||| |||| ||||||||||||| ||||| || |||||    
T  49250860 gggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaactcatacccatacccaaaccca 49250761  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| ||||||||| |||||||||    
T  49250760 gtcaaaacggagaaaacccgtcaaat 49250735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 9982987 - 9982825
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||  ||||||||||||||||||||||||| ||| ||||| ||| |||||| || | | ||||| ||||||||| | |||||| ||| |||||||    
T  9982987 cattcgggatgggtttgggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgttttgaaattggggaaaattcaaactcata 9982888  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    | || ||||||||||| |||||||||||| |||||| ||  |||||| ||| ||||| |||||    
T  9982887 cccaaacccagtcaaaacggagaaaatccatcaaattggatttggttcgggagagtaaccacg 9982825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 29936418 - 29936599
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccc- 110  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | |||||||||||||| |||| ||||||| ||||| |||||||| ||||     
T  29936418 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcggggaaaacccatacccatactcataccca 29936517  T
Q  111 -----agtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
         ||||||| ||| ||||| ||||||||| ||| |||||| ||||| ||| ||||| | | ||||||||||||| ||||    
T  29936518 aacttagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgtcatgcc 29936599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 17134954 - 17135117
Alignment:
Q  17 tgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaa 116  Q
    |||||||||||||||||  | ||| ||||| | | ||||||||||| ||||||| ||||||||||| ||||||| ||||| || || || ||||||||||    
T  17134954 tgggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgttttgaaatcggggaaaacccatacccacacccaaacccagtcaa 17135053  T
Q  117 atcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    | | ||||||||||||||||| ||| |||||| ||||| ||| || || | | |||||||||||    
T  17135054 aacagagaaaatccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttg 17135117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 36187307 - 36187139
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||||||||||| |||||| ||| ||||| | | ||||||||| | ||||||| |||||| |||| ||||||| ||||| ||||| || |||||    
T  36187307 gggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccca 36187208  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||| ||| ||||| | | |||||| ||||| ||| | ||| | | |||||||||||    
T  36187207 gtcaaaacggggaaaacccgccaaattgagtttggttcgggcgggtaacgacgggtatgggttttgttg 36187139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 51421860 - 51422012
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||||||||| |   ||||||||| | ||||||| |||||| |||| | ||||| ||||| ||||| || |||||    
T  51421860 gggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaaccca 51421959  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    ||||||  || ||||| || |||||| ||| |||||| ||||| ||| |||||    
T  51421960 gtcaaaatggggaaaacccatcaaattgggtttggttcgggcgggtaaccacg 51422012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 10778646 - 10778529
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    ||||||||||||||||||||  |||| || | ||||||||| | ||||||| ||||||||||| | |||||| | |||||||| || ||||||||||| |    
T  10778646 gtatgggttcggggtggatatctataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaactcatacccaaacccagtcaaagc 10778547  T
Q  120 ggagaaaatccgtcaaat 137  Q
    ||| |||| |||||||||    
T  10778546 ggaaaaaacccgtcaaat 10778529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 13798240 - 13798376
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||| ||||||  || |||||||||| |||||||||| |||||| |||| ||||||| ||||||||||| | ||||| || |||||||| || |||||    
T  13798240 gggtttaggtatgaatttggggtggataaatatatcctcgttacccatctcatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaaccca 13798339  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    |||| | ||| ||||| |||| |||| ||| ||||||    
T  13798340 gtcataccggggaaaacccgttaaattgggtttggtt 13798376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 45866272 - 45866150
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||| ||| ||||||| ||| ||||| ||||||||| ||||| ||||||| ||||||||||| ||||||| ||||| ||||| || ||| |    
T  45866272 gggtatgggtatgagtttggggtgggtacctatatactcattacctgtctcatacccgtgttttgaaatcggggaaaacccatacccatacccaaaccta 45866173  T
Q  112 gtcaaatcggagaaaatccgtcaa 135  Q
    ||||||  |||||||| |||||||    
T  45866172 gtcaaa-aggagaaaacccgtcaa 45866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 48125768 - 48125701
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatc 81  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||| |||||    
T  48125768 gtttgggtatgggttcggggtggatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 48125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 10450156 - 10450078
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaat 80  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||   ||||||| | |||||||||||||| ||||    
T  10450156 cattcgggtagggtttgggtatgagttcggggtgggtacatatatccctgttacccgccccgtacccgtattttaaaat 10450078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 34673368 - 34673227
Alignment:
Q  13 ggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccag 112  Q
    |||||||||||||||||||||||| ||| ||||| | | ||||| ||||| ||||||| ||||||||| | | ||||| || || ||||| || ||||||    
T  34673368 ggtttgggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaattgggaaaaacccaaacccatacccaaacccag 34673269  T
Q  113 tcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    | |||  || |||||||||| |||| ||| |||||| |||||    
T  34673268 ttaaaatggggaaaatccgttaaattgggtttggttcgggcg 34673227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 19572591 - 19572431
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    ||||||||||||||||| ||| ||||| | | ||||| ||| | ||||||| ||||||||||| | ||||| ||||| ||||| || |||||||||||      
T  19572591 gtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacccagtcaaaat 19572492  T
Q  120 ggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    || ||||| |||||||||  || |||||| ||||| ||| ||||  | | |||||||||||    
T  19572491 ggggaaaacccgtcaaattaggtttggttcgggcgggtaaccacaagtatgggttttgttg 19572431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 5181047 - 5181166
Alignment:
Q  18 gggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaa 117  Q
    ||||||||||| ||||||| | | ||||| | | ||||||||| | ||||||||||||||||||| ||||||| ||||| |||||  | |||||||||||    
T  5181047 gggtatgggtttggggtgggtgcctatatacccgttacccgtcccatacccgtattttgaaatcggggaaaacccatacccatacctaaacccagtcaaa 5181146  T
Q  118 tcggagaaaatccgtcaaat 137  Q
      || ||||| |||||||||    
T  5181147 atggggaaaacccgtcaaat 5181166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 28297936 - 28298035
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||| ||||||||||||| ||||| || |||||    
T  28297936 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccataccca 28298035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 34085242 - 34085361
Alignment:
Q  17 tgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaa 116  Q
    |||||||||||||||||||| |||||||| || | |||||| || | ||| ||| ||||||||||| | ||||| || |||||||  |  ||||||||||    
T  34085242 tgggtatgggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaacccaaactcatatcctaacccagtcaa 34085341  T
Q  117 atcggagaaaatccgtcaaa 136  Q
    | ||||||||| ||||||||    
T  34085342 agcggagaaaacccgtcaaa 34085361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 42707917 - 42707799
Alignment:
Q  18 gggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaa 117  Q
    ||||||||||||||| ||  ||| ||||| | | ||||||||| | ||||||| |||||||||||  |||||||||||||||||| || |||||||||||    
T  42707917 gggtatgggttcggg-tgagtacttatattcccgttacccgtcccatacccgtgttttgaaatcggagaaaactcatactcatacccaaacccagtcaaa 42707819  T
Q  118 tcggagaaaatccgtcaaat 137  Q
      ||  ||||||||||||||    
T  42707818 atgggaaaaatccgtcaaat 42707799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 23490858 - 23490716
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||| |||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||| ||||||| ||||| ||||| || |||||    
T  23490858 gggttttggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaaccca 23490759  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    |||||| | |  |||| ||||||||| ||  |||||| |||||    
T  23490758 gtcaaaacaggaaaaacccgtcaaattggatttggttcgggcg 23490716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 23968619 - 23968749
Alignment:
Q  50 cattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggttt 149  Q
    ||||||||||| | ||||||| |||||||| || ||||||| ||||| ||||| || ||||| |||||  || ||||||||||||||| ||| ||||||     
T  23968619 cattacccgtcccatacccgtgttttgaaaccggggaaaacccatacccatacccaaacccaatcaaaatggggaaaatccgtcaaattgggtttggttc 23968718  T
Q  150 gggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||| ||| || || | | |||||||||||    
T  23968719 gggcgggtaaccgcgggtatgggttttgttg 23968749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 12718858 - 12718769
Alignment:
Q  13 ggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatac 102  Q
    ||||||||||||||||| |||||| |||||||||   | ||||||||||||||| |||||| |||||||| ||||||  || ||||||||    
T  12718858 ggtttgggtatgggttcagggtgggtacatatatttccgttacccgtctcgtacacgtattatgaaatcggggaaaatccaaactcatac 12718769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 16408944 - 16409069
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||| | |||||||||||||| | ||| ||||| |   ||||||||| | ||||||| ||||||||| | ||||||| ||||| ||||| || |||||    
T  16408944 gggtttagctatgggttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaattggggaaaacccatacccatacccaaaccca 16409043  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| ||| ||||| |||||||||    
T  16409044 gtcaaaacggggaaaacccgtcaaat 16409069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 41477039 - 41476934
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||||||| |||||||||| ||||||||||| | ||| ||||| ||||| ||||||||  ||||||  ||||| || ||||||| ||| || ||    
T  41477039 gggtttgggtatggattcggggtgggtacatatatccacgttatccgtcccgtactcgtattttccaatcgaaaaaaacccaaactcatattcaaactca 41476940  T
Q  112 gtcaaa 117  Q
    ||||||    
T  41476939 gtcaaa 41476934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 44615562 - 44615394
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||| ||| ||||||| ||| ||||| |   ||||||||| | ||||||| |||| |||||  ||||||| || |||||||| || |||||    
T  44615562 gggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaaccca 44615463  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| |||  |||| ||||||||| | | ||||| |||| | ||| ||||| | | |||||||||||    
T  44615462 gtcaaaacgggaaaaacccgtcaaattgagtttggtctgggtgggtaaccacgggtatgggttttgttg 44615394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 44793007 - 44793175
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||| ||| ||||||| ||| ||||| |   ||||||||| | ||||||| |||| |||||  ||||||| || |||||||| || |||||    
T  44793007 gggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaaccca 44793106  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| |||  |||| ||||||||| | | ||||| |||| | ||| ||||| | | |||||||||||    
T  44793107 gtcaaaacgggaaaaacccgtcaaattgagtttggtctgggtgggtaaccacgggtatgggttttgttg 44793175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 24236848 - 24236706
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| ||||||||||||||||| ||| ||||| | | || |||||  | ||||||| |||||| |||| ||||||| ||||| |||||  | |||||    
T  24236848 gggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagatcggggaaaacccatacccatacctaaaccca 24236749  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    |||||| |||  |||| ||||||||| | | |||||| |||||    
T  24236748 gtcaaaacgggaaaaacccgtcaaattgagtttggttcgggcg 24236706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 33293588 - 33293494
Alignment:
Q  42 tatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaa 136  Q
    ||||||| ||||||||||| | ||||||| ||||||||||| | ||||| || |||||||| || ||||| ||||| |||| ||||| |||||||    
T  33293588 tatatccccattacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccaatcaaaacggaaaaaattcgtcaaa 33293494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 34060106 - 34060028
Alignment:
Q  18 gggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatac 96  Q
    |||||||||||||| |||| ||| ||||| |   ||| ||||||| ||||||| |||||||||||||||||||||||||    
T  34060106 gggtatgggttcggagtgggtacctatatacctgttatccgtctcatacccgtgttttgaaatcgaggaaaactcatac 34060028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 24710889 - 24710974
Alignment:
Q  52 ttacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaat 137  Q
    ||||||||| | ||||||| |||||| |||| ||||||| ||||||||||  || ||||||||||| ||| ||||| |||||||||    
T  24710889 ttacccgtcccatacccgtgttttgagatcggggaaaacccatactcatatccaaacccagtcaaaacggggaaaacccgtcaaat 24710974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 18354162 - 18354042
Alignment:
Q  17 tgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaa 116  Q
    ||||||| ||||||||||||  || ||||| | | ||||||||| | ||||| | ||||||||||| ||||||| ||||| |||| ||| | ||||||||    
T  18354162 tgggtatcggttcggggtgggaacttatatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccatacccatattcaaatccagtcaa 18354063  T
Q  117 atcggagaaaatccgtcaaat 137  Q
    | |||  |||| |||||||||    
T  18354062 aacgggaaaaacccgtcaaat 18354042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 13262870 - 13262831
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  13262870 caacgaattcgttgacacctggtgtcaacggatcctaact 13262831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 10450068 - 10450014
Alignment:
Q  108 cccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtaccca 162  Q
    ||||||||||| || ||||| ||||||||| |||||||||||||||| |||||||    
T  10450068 cccagtcaaattggggaaaacccgtcaaattggggttggtttgggcgggtaccca 10450014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 20774654 - 20774736
Alignment:
Q  98 catactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||| || ||||||||||| ||| ||||||||||||||| ||| |||||| ||||| ||| ||||| | | |||||||||||    
T  20774654 catacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttggttcgggcgggtaaccacgagtatgggttttgttg 20774736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 12495012 - 12495137
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||| ||||| ||| ||||| | | |||| |||| | || |||| ||||||||||| | |||||  | || |||||  | |||||    
T  12495012 gggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatcgggaaaaaccaaaacccataccgaaaccca 12495111  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    ||||||  || |||||||||||||||    
T  12495112 gtcaaagtggggaaaatccgtcaaat 12495137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 40087542 - 40087426
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    ||||| ||||||||||| ||| ||||| | | |||| | || | |||| || ||||||| ||| ||||||||||||| ||||| || || |||||||| |    
T  40087542 gtatgagttcggggtgggtacctatattcccgttactcatcccatacctgtgttttgaa-tcggggaaaactcatacccatacccaaactcagtcaaaac 40087444  T
Q  120 ggagaaaatccgtcaaat 137  Q
    || |||||||||||||||    
T  40087443 ggggaaaatccgtcaaat 40087426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 17171968 - 17171932
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    |||||||||||||||||||| ||||||||||||||||    
T  17171968 caacgaattcgttgacacctggtgtcaacggatccta 17171932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 39219262 - 39219338
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||||||||||||||||||| ||||| ||||| | ||||  ||  ||||||||| |||| |||||| |||||||    
T  39219262 gtttgggtatgggttcggggtgggtacatgtatccccgttacttgttccgtacccgtgttttaaaatcggggaaaac 39219338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 49680870 - 49680809
Alignment:
Q  246 attgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| |||||||||||||||||||      || ||||||||||| |||||||||||||||||||    
T  49680870 attgatggatgagatttggtgtcaacga------atccgttgacacctggtgtcaacggatcctaact 49680809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 471
Target Start/End: Original strand, 32151776 - 32151811
Alignment:
Q  436 ggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||||||||||||||||| |||||||||||||||||    
T  32151776 ggtgtagcttgctaacttgcaccttagtgtttttag 32151811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 34611075 - 34611250
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||  ||| ||||| | | ||||  ||| | ||||||| |||||| |||| | ||||| ||||| ||||| || |  ||    
T  34611075 gggtttgggtatgggttcggggtgagtacctatatacacgttacatgtcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaattca 34611174  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
     ||||| ||| ||||| ||||||||| ||  ||||||  |||| ||| ||||| | | || |||||||||| ||||    
T  34611175 atcaaaacggggaaaacccgtcaaattggatttggttcaggcgggtaaccacgggtatggattttgttgtcatgcc 34611250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 36390382 - 36390421
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  36390382 caacggattcgttgacacctggtgtcaacggatcctaact 36390421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 50426742 - 50426679
Alignment:
Q  18 gggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatc 81  Q
    ||||||||||||||||||| ||| ||||| | | ||| ||||||| ||||||| ||||||||||    
T  50426742 gggtatgggttcggggtgggtacctatatacccgttatccgtctcatacccgtgttttgaaatc 50426679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 3628064 - 3627994
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||||||||||||| ||| || || | | ||||||||| | ||||||| ||||||||||| |||||||    
T  3628064 gtatgggttcggggtgggtacctacatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 3627994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 5293481 - 5293368
Alignment:
Q  23 tgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcgga 122  Q
    |||||| || |||| |||||||||||   ||| |||||  ||||| ||||||||||||||  |||| | || ||||||||||| || |||||||| ||||    
T  5293481 tgggtttggagtgggtacatatatccctgttatccgtcctgtaccagtattttgaaatcggagaaacc-caaactcatactcaaacacagtcaaagcgga 5293383  T
Q  123 gaaaatccgtcaaat 137  Q
    ||||| |||| ||||    
T  5293382 gaaaacccgttaaat 5293368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 8880450 - 8880528
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    |||||||||||||||| | |||||||||| | ||||| ||||||| |||  |||| ||| |||| ||||||| ||||||    
T  8880450 gggtttgggtatgggtccagggtggatacctttatccccattacctgtcctgtactcgtgtttttaaatcgaagaaaac 8880528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 313
Target Start/End: Complemental strand, 12760812 - 12760774
Alignment:
Q  275 aacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  12760812 aacgaattcgttgacaccaggtgtcaacggatcctaact 12760774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 13390459 - 13390540
Alignment:
Q  72 ttttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    ||||||||||| |||||| |||||| ||||| || ||||||||||| ||| | ||| ||||||||| ||| |||||| |||||    
T  13390459 ttttgaaatcggggaaaattcatacccatacccaaacccagtcaaaacgg-ggaaacccgtcaaattgggtttggttcgggcg 13390540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 16903515 - 16903569
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacc 56  Q
    ||||||||  ||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  16903515 cattcgggacgggtttgggtatgagttcggggtgggtacctatatccccattacc 16903569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 27867230 - 27867344
Alignment:
Q  37 atacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaa 136  Q
    |||| |||||| || |||| |||||||||||| | ||||||||||  | |||||||  || |||| | | ||||||||||| ||||||||| |  |||||    
T  27867230 atacctatatcttcgttactcgtctcgtacccatgttttgaaatcaggaaaaactcgaacacatatttaaacccagtcaaaacggagaaaacctatcaaa 27867329  T
Q  137 tcggggttggtttgg 151  Q
    | ||||| |||||||    
T  27867330 ttggggtgggtttgg 27867344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 154
Target Start/End: Original strand, 39616346 - 39616436
Alignment:
Q  64 tacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    ||||||| ||||||||| | ||||||| ||||||||||| || || |||||||| ||| |||||  |||||||| | | |||||| |||||    
T  39616346 tacccgtgttttgaaataggggaaaacccatactcatacccaaactcagtcaaaacggggaaaactcgtcaaattgagtttggttcgggcg 39616436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 4433862 - 4433903
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaactta 315  Q
    |||||||| ||||||||||| |||||||||||||||| ||||    
T  4433862 caacgaatccgttgacacctggtgtcaacggatcctatctta 4433903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 471
Target Start/End: Original strand, 52853897 - 52853930
Alignment:
Q  438 tgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||||||||||||||| |||||||||||||||||    
T  52853897 tgtagcttgctaacttgcaccttagtgtttttag 52853930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 508486 - 508446
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| |||| ||||||||||||| |||||||||||||||||    
T  508486 aagtcggtgcagcttgctaacttgcaccttagtgtttttag 508446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 17172677 - 17172713
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  17172677 caacgaatccgttgacacctggtgtcaacggatccta 17172713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 27055725 - 27055685
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||| |||||||||||||||||||| |||||||    
T  27055725 aagtgggtgtaggttgctaacttacaccttagtatttttag 27055685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 35760499 - 35760539
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||| |||||||||||||||||||| |||||||    
T  35760499 aagtgggtgtaggttgctaacttacaccttagtatttttag 35760539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 37553161 - 37553121
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  37553161 aagtgggtgtaggttgctaacttgcaccttagtgtttttag 37553121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 37553473 - 37553421
Alignment:
Q  346 ggggctgctaatttaca-ccaccccaaaatagtaaggtgcaagttagcaagct 397  Q
    ||||||||||| ||||| |||||  |||||| |||||||||||||||||||||    
T  37553473 ggggctgctaacttacatccacctaaaaatactaaggtgcaagttagcaagct 37553421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 46435645 - 46435685
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||| |||||||||||||||||||| |||||||    
T  46435645 aagtgggtgtaggttgctaacttacaccttagtatttttag 46435685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 49741104 - 49741060
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatat 46  Q
    ||||||||  ||||||||||||||||||||||||| ||| |||||    
T  49741104 cattcgggacgggtttgggtatgggttcggggtgggtacctatat 49741060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 3e-46; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 18908884 - 18909062
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||||||||  ||||||||| | || |||||||||||||||| ||||||| || |||||||    
T  18908884 cattcgggtagggtttgggtatgagtttggggtgggtacatatatccttgttacccgtcccatatccgtattttgaaatcggggaaaacccaaactcata 18908983  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||| || |||||| |||||  |||||||||||||||| |||||||||||||| ||||| | | |||||||||||||||    
T  18908984 ctcaaactcagtcacatcgggaaaaatccgtcaaatcgaggttggtttgggcgggtacctatgggcacgggttttgttg 18909062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 9458654 - 9458804
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||||||||| |||||||||| ||||| ||||| ||||||||||| | ||| | ||| ||||||||||||||||||| | ||||| |||| |||||||    
T  9458654 cattcgggtaggatttgggtatgagttcgaggtgggtacatatatccccgttatctgtcccgtacccgtattttgaaattggggaaatctcaaactcata 9458753  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttggg 152  Q
    | || ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  9458754 cccaaacccagtcaaatcggggaaaatccgtcaaatcgaggttggtttggg 9458804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 29199982 - 29199836
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||   ||||||||| ||||||||||||||||||||| |||||| ||             
T  29199982 cattcgggtagagtttgggtatgggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaa-tc--------- 29199893  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacc 160  Q
      || ||||| ||||||||| |||||||||||||||||||||||||||||||| |||||    
T  29199892 --caaacccaatcaaatcggggaaaatccgtcaaatcggggttggtttgggcgggtacc 29199836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 20611079 - 20610901
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||| |||||||| ||||||| | |||||||||||||||||||| | | ||||||||| | ||||||||||||||||||| ||||| | || || ||||    
T  20611079 cattcaggtagggtctgggtatagtttcggggtggatacatatattcccgttacccgtcccctacccgtattttgaaatcggggaaaccccaaacccata 20610980  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |  | ||||||| |||||||  |||| |||||||||||  |||||||| |||| ||||||| | |||||| ||||||||    
T  20610979 cctaaacccagttaaatcgggaaaaacccgtcaaatcgaagttggttttggcgggtacccatgggcacggtttttgttg 20610901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 5863470 - 5863302
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||| ||||| ||  ||||| | | ||||||||| | ||||||| ||||||||||| ||||||| ||||| ||||| || |||||    
T  5863470 gggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaaccca 5863371  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||| ||||||||| ||| |||||| ||||  ||| ||||| | | |||||||||||    
T  5863370 gtcaaaacggggaaaacccgtcaaattgggtttggttcgggcaggtaaccacgggtatgggttttgttg 5863302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 32853845 - 32854013
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| |||||| |||| ||||||| ||||| ||||  || |||||    
T  32853845 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaaccca 32853944  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||||||||| ||||||||| ||| |||||| || ||  || ||||| | | |||||||||||    
T  32853945 gtcaaaacggagaaaacccgtcaaattgggtttggttcggtcggataaccacgggtatgggttttgttg 32854013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 32532549 - 32532683
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    ||||||||||||||||| ||| ||||| | ||||||||||| | ||||||| ||||||||||| ||||||| |||||||||||||| ||||| | ||| |    
T  32532549 gtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcggggaaaacccatactcatactcaaacccaatgaaaac 32532648  T
Q  120 ggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    ||| |||| ||||||||| ||  ||| ||||||||    
T  32532649 ggaaaaaacccgtcaaattggatttgatttgggcg 32532683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 3484010 - 3483842
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | |||||| || | ||||||| ||| || |||| ||||||| ||||| ||||| || |||||    
T  3484010 gggtttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaacccatacacatacccaaaccca 3483911  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||| ||||||||| ||| |||||| ||||| ||| ||| | | | |||||||||||    
T  3483910 gtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccatgagtatgggttttgttg 3483842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 256579 - 256489
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatac 102  Q
    ||||||||||||||||| ||||||| ||| ||||| | ||||||||||||||||||| | ||||||||||| |||||||||| ||||||||    
T  256579 gggtttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgttttgaaatcggggaaaactcaaactcatac 256489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 10188160 - 10187999
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| |||||       ||||||| | ||||||| |||||| |||| ||||||| ||||| ||||| || |||||    
T  10188160 gggtttgggtatgggttcggggtgggtacctatat-------acccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccca 10188068  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||| ||||||||| ||| |||||| ||||| ||| ||||| | | |||||||||||    
T  10188067 gtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 10187999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 9458849 - 9458968
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||| ||||||||||  ||||||||||| ||||||||| | | |||||| || |||||||||||| | |||||| ||||||| || || ||||    
T  9458849 cattcgggtagagtttgggtataagttcggggtgggtacatatattcccgttacccatcccgtacccgtattattaaatcggggaaaacccagacccata 9458948  T
Q  102 ctcagacccagtcaaatcgg 121  Q
    | || |||||||||||||||    
T  9458949 cccaaacccagtcaaatcgg 9458968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 15498325 - 15498467
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||| |||||||||| ||| ||| ||||| | ||||||| ||||| ||||||| ||||||||||| ||||||| ||||  ||||| || |||||    
T  15498325 gggtttgggtgtgggttcgggatgggtacctatatacccattacctgtctcatacccgtgttttgaaatcggggaaaacccatatccatacccaaaccca 15498424  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
     ||||| ||||||||| |||| |||| ||| ||| || |||||    
T  15498425 ttcaaaacggagaaaacccgttaaattgggtttgattcgggcg 15498467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 17546997 - 17546840
Alignment:
Q  4 ttcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatact 103  Q
    |||||||||||||||| |||| ||||||||||| ||||| ||||| | |||||  || |||| ||||||| |||||||||||||| | || || |||||     
T  17546997 ttcgggtagggtttggatatgagttcggggtgggtacatgtatccccgttaccgatcccgtatccgtattatgaaatcgaggaaaccccaaacccatacc 17546898  T
Q  104 cagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtaccca 162  Q
    || |||||||||||| | | |||| || || |||| ||||||||||||||  |||||||    
T  17546897 caaacccagtcaaattgaaaaaaacccatc-aatcagggttggtttgggcaggtaccca 17546840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 27534685 - 27534810
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||||||| |||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||| ||||||||||||| ||||| || |||||    
T  27534685 gggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaaccca 27534784  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
     ||||| ||| ||||| |||||||||    
T  27534785 atcaaaacggggaaaacccgtcaaat 27534810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 2367327 - 2367495
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| |||||| |||| ||||||| ||||| ||||| || ||| |    
T  2367327 gggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccta 2367426  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| |||  |||| || |||||| ||| |||||| || || ||| |||||   | |||||||||||    
T  2367427 gtcaaaacgggaaaaacccatcaaattgggtttggttcggacgggtaaccacggatatgggttttgttg 2367495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 187
Target Start/End: Complemental strand, 28079780 - 28079608
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtc 114  Q
    |||||||||||||||||||||| ||| ||||||| | ||||||||| ||||||| | ||||||||||| ||||||| || || ||||| || || ||| |    
T  28079780 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaaactcagcc 28079681  T
Q  115 aaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    ||| |||  || | ||||||||  ||| ||||| |||| | |||||| || | | ||||||||||||| ||||    
T  28079680 aaagcgggaaatacccgtcaaaatgggtttggtatgggtgggtacccgcgggtatgggttttgttgtcatgcc 28079608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 27738773 - 27738878
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| |||||||||     ||||||||| | ||||||| ||||||||||| ||||||| ||||| |||||  | |||||    
T  27738773 gggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacctaaaccca 27738872  T
Q  112 gtcaaa 117  Q
    ||||||    
T  27738873 gtcaaa 27738878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 12678190 - 12678066
Alignment:
Q  3 attcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatac 102  Q
    |||||||  |||||||||||||||||| |||||| ||| ||||| | | ||||||||| | |||| || | ||||||||| ||||||| || ||||||||    
T  12678190 attcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaacgcaaactcatac 12678091  T
Q  103 tcagacccagtcaaatcggagaaaa 127  Q
     || ||||||||||| ||| |||||    
T  12678090 ccaaacccagtcaaaacggcgaaaa 12678066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 12141386 - 12141511
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | | ||||||| | || |||| |||||| || | ||||||| ||||| | ||| || |||||    
T  12141386 gggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttgagattggggaaaacccatacccgtacccaaaccca 12141485  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| ||| ||||| |||||||||    
T  12141486 gtcaaaacggggaaaacccgtcaaat 12141511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 14410942 - 14410861
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactca 93  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||||||||||  ||||||||||    
T  14410942 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactca 14410861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 10142604 - 10142500
Alignment:
Q  13 ggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccag 112  Q
    |||||||||||| ||||||||||| ||| ||||| | | ||||| ||| | ||||||| |||||| |||| ||||||| ||||| ||||| || ||||||    
T  10142604 ggtttgggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgagatcggggaaaacccatacccatacccaaacccag 10142505  T
Q  113 tcaaa 117  Q
    |||||    
T  10142504 tcaaa 10142500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 180
Target Start/End: Original strand, 30986294 - 30986422
Alignment:
Q  52 ttacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgg 151  Q
    ||||||||| | ||||||| |||||| |||| ||||||| ||||| ||||| || || |||||||| ||| ||||| ||||||||| | | |||||| ||    
T  30986294 ttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgagtttggttcgg 30986393  T
Q  152 gcgagtacccacgtgcacgggttttgttg 180  Q
    ||| ||| ||||| | | |||||||||||    
T  30986394 gcgggtaaccacgggtatgggttttgttg 30986422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 7393972 - 7393897
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaa 89  Q
    ||||| ||||||||||||||||||||| ||||| | ||||| ||||||| ||| ||| ||||||||||| ||||||    
T  7393972 gtttgagtatgggttcggggtggatacctatatacccattatccgtctcttactcgtgttttgaaatcggggaaaa 7393897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 10925528 - 10925463
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaa 79  Q
    |||| |||||||||||||||||||||| ||||||  |||||||| |||||||||| | ||||||||    
T  10925528 gtttaggtatgggttcggggtggatacttatatctccattacccatctcgtacccatgttttgaaa 10925463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 31496502 - 31496603
Alignment:
Q  79 atcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgt 178  Q
    |||| ||||||||||||| ||||| || ||||||||||| ||| ||||| ||||||||| | | ||||||||| || ||| ||||| | | |||||||||    
T  31496502 atcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttggacgggtaaccacgggtatgggttttgt 31496601  T
Q  179 tg 180  Q
    ||    
T  31496602 tg 31496603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 31501888 - 31501989
Alignment:
Q  79 atcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgt 178  Q
    |||| ||||||||||||| ||||| || ||||||||||| ||| ||||| ||||||||| | | ||||||||| || ||| ||||| | | |||||||||    
T  31501888 atcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttggacgggtaaccacgggtatgggttttgt 31501987  T
Q  179 tg 180  Q
    ||    
T  31501988 tg 31501989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 32959868 - 32959929
Alignment:
Q  19 ggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaat 80  Q
    |||||||||||||||||||||| ||||||| | ||||||||  ||||||||| |||||||||    
T  32959868 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 32959929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 32053089 - 32053173
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatac 96  Q
    ||||||||||||||||| ||||||| ||||||||| | | ||||||||| | || || | ||||||||||| ||||||| |||||    
T  32053089 gggtttgggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcggggaaaacccatac 32053173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 20349068 - 20349155
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatac 102  Q
    |||||||||| ||||||||||| ||| ||||||| | |||| |||| | ||||||| ||||||||||| ||||||  || ||||||||    
T  20349068 tttgggtatgagttcggggtgggtacctatatccccgttactcgtcccatacccgtgttttgaaatcggggaaaatccaaactcatac 20349155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 249 - 309
Target Start/End: Original strand, 19323762 - 19323816
Alignment:
Q  249 gatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcct 309  Q
    |||||||||||||||||||||||      |||||||||||||||| |||||||||||||||    
T  19323762 gatggttgagatttggtgtcaac------gaattcgttgacacctggtgtcaacggatcct 19323816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 10171980 - 10172019
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  10171980 caacgaatgcgttgacacctggtgtcaacggatcctaact 10172019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 12309573 - 12309672
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||||| |||||||||||| ||||||||| |   ||||||||  | ||||||| ||||||||||  |||| || ||||| ||||| || |||||    
T  12309573 gggtttgggtatcggttcggggtgggtacatatatacctgttacccgttccatacccgtgttttgaaatcagggaatacccatacccatacccaaaccca 12309672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 471
Target Start/End: Original strand, 18053698 - 18053733
Alignment:
Q  436 ggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||||||||||||||||| |||||||||||||||||    
T  18053698 ggtgtagcttgctaacttgcaccttagtgtttttag 18053733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 24225699 - 24225798
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||| ||||||||||||||| ||| ||||| | | ||||||||| | || |||| |||||| |||| ||||||  ||||| ||||| || |||||    
T  24225699 gggtttgggcatgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttgagatcggggaaaatccatacccatacccaaaccca 24225798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 26528860 - 26528821
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  26528860 caacgaatgcgttgacacctggtgtcaacggatcctaact 26528821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 30816251 - 30816395
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||  |||||||| |||||||||||||||| | | ||||| | |||||||| || | ||||||| |||  |||  | |||||||||| || ||||    
T  30816251 cattcgggacgggtttggatatgggttcggggtgggttcctatatacccattacccatcccatacccgtgttt--aaaatggggaaaactcaaacccata 30816348  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
      || ||||| ||||| ||| |||||||| |||||| ||| ||||||    
T  30816349 tccaaacccaatcaaaacggggaaaatccatcaaattgggtttggtt 30816395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 34178398 - 34178347
Alignment:
Q  30 ggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatc 81  Q
    ||||||| ||| ||||||||  ||||||||||||||||||| ||||||||||    
T  34178398 ggggtgggtacctatatccttgttacccgtctcgtacccgtgttttgaaatc 34178347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 5861956 - 5861918
Alignment:
Q  235 gattaaatgagattgatggttgagatttggtgtcaacga 273  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  5861956 gattaaaatagattgatggttgagatttggtgtcaacga 5861918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 8489295 - 8489329
Alignment:
Q  275 aacgaattcgttgacacctagtgtcaacggatcct 309  Q
    ||||||||||||||||||| |||||||||||||||    
T  8489295 aacgaattcgttgacacctggtgtcaacggatcct 8489329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 9458959 - 9459015
Alignment:
Q  131 gtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    ||||||||||||||||||||||||  || |||   ||||||||||||||||| ||||    
T  9458959 gtcaaatcggggttggtttgggcggttatccataagcacgggttttgttgtcatgcc 9459015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 67740 - 67918
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||| |||||||||||||||| || ||||||||| ||||||||||| | ||| ||||| |||| ||||||||| |||||| ||||||  || || ||||    
T  67740 cattcaggtagggtttgggtataggctcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccata 67839  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||| ||||||||||||||| ||||| | |||||||||||||||||||||||| |||| || | |||||||||||||||    
T  67840 ctcaaacccagtcaaatcggggaaaacctgtcaaatcggggttggtttgggcgggtactcatgggcacgggttttgttg 67918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 75583 - 75761
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||| |||||||||||||||| || ||||||||| ||||||||||| | ||| ||||| |||| ||||||||| |||||| ||||||  || || ||||    
T  75583 cattcaggtagggtttgggtataggctcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccata 75682  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||| ||||||||||||||| ||||| | |||||||||||||||||||||||| |||| || | |||||||||||||||    
T  75683 ctcaaacccagtcaaatcggggaaaacctgtcaaatcggggttggtttgggcgggtactcatgggcacgggttttgttg 75761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 2e-41; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 2681207 - 2681385
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||| |||||||||||||||||||||||||||||||  |||||| |||||||| || |||||| |||||||||||||| ||||||| || ||||||     
T  2681207 cattcggatagggtttgggtatgggttcggggtggatactcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaactcatg 2681306  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    | || || |||||||||||| ||||| ||||||||| | ||||||||||| || ||||||| | ||||| |||||||||    
T  2681307 cccaaactcagtcaaatcggggaaaacccgtcaaattgaggttggtttggacgggtacccatgggcacgagttttgttg 2681385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 23045089 - 23044915
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||  | |||||| || ||||||||||||||||||||| |||||||  | || ||||    
T  23045089 cattcgggtagggttttggtatgggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaacctaaacccata 23044990  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggtttt 176  Q
    | || || ||||||||| ||  |||| |||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  23044989 cccaaactcagtcaaattgggaaaaacccgtcaaatcggggttggtttgggcgggtacccatgtgcacggatttt 23044915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 28569106 - 28568941
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtc 114  Q
    |||||||||||||||||||||| ||| ||||||| | ||||||||| |||||||| |||||||||||| ||||||  || |||||||| || ||||||||    
T  28569106 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaaactcatacccaaacccagtc 28569007  T
Q  115 aaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||| | ||||| ||||||||||| || |||||||||||  ||||||||  || |||||||||||    
T  28569006 aaatcagggaaaacccgtcaaatcgaggatggtttgggcggctacccacgaacatgggttttgttg 28568941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 4920827 - 4920995
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||||||| ||||| | | ||||||||| | ||||||| |||||| |||| ||||||| ||||| ||||  || |||||    
T  4920827 gggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaaccca 4920926  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||||||||| ||||||||| ||| |||||| ||||| ||| ||||| | | |||||||||||    
T  4920927 gtcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 4920995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 43523750 - 43523888
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||       ||||    ||||||||||||||||||| ||||||| || |||||||    
T  43523750 cattcgggtagggtttgggtatgagttcggggtggatacatatatcc-------ccgt----tacccgtattttgaaatcggggaaaacccaaactcata 43523838  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgg 151  Q
    | || || ||||||||||||  |||||||||||||||||| |||||||||    
T  43523839 cccaaactcagtcaaatcgggaaaaatccgtcaaatcgggattggtttgg 43523888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 2 - 187
Target Start/End: Original strand, 12915464 - 12915648
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||||||||||||||||||||| ||||| |||| ||||| ||||| ||||||| ||| | | || ||||| |||||||| | ||||| || || ||||    
T  12915464 cattcgggtagggtttgggtatggcttcggagtgggtacatgtatccccattacctgtcccatgcctgtattatgaaatcgggaaaaacccaaacccata 12915563  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    | ||  |||||||||||||| | |||||||||||||||| ||||||||||||| |||||||   ||| || |||||||||| ||||    
T  12915564 cccaaccccagtcaaatcgg-ggaaatccgtcaaatcggtgttggtttgggcgggtacccataagcatggattttgttgtcatgcc 12915648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 18116604 - 18116471
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||       ||||    |||||||||||||||||||  |||||| || |||||||    
T  18116604 cattcgggtagggtttgggtatgagttcggggtggatacatatatcc-------ccgt----tacccgtattttgaaatcggagaaaacccaaactcata 18116516  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttgg 146  Q
    | || || ||||||||||||  |||||||||||||||||||||||    
T  18116515 cccaaactcagtcaaatcgggaaaaatccgtcaaatcggggttgg 18116471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 12712655 - 12712489
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||  | ||| ||||| |||||||||||||||||||||  |||||| || |||        
T  12712655 cattcgggtagggtttgggtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaaact---- 12712560  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
            |||||||||||| ||||| | |||||||||||||||||||||||| || |||| || |||||  |||||||    
T  12712559 --------cagtcaaatcggggaaaacctgtcaaatcggggttggtttgggcgggtgcccatgtacacggaatttgttg 12712489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 187
Target Start/End: Original strand, 20650291 - 20650471
Alignment:
Q  7 gggtagggttt-gggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactca 105  Q
    ||||||||||| ||||||||||||||||||  | |||||||||  |||||||||||| || ||||||||| |||| | |||||||| | |||||||| ||    
T  20650291 gggtagggttttgggtatgggttcggggtgagtgcatatatccctattacccgtctcatatccgtattttaaaattggggaaaactgaaactcataccca 20650390  T
Q  106 gacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
     ||  ||||||||  | |||||||  |||||||| |||||||||| | | ||||||| | ||||||||||||||||| ||||    
T  20650391 aactaagtcaaattag-gaaaatctatcaaatcgaggttggtttgagagggtacccatgggcacgggttttgttgtcatgcc 20650471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 7 - 187
Target Start/End: Original strand, 20634177 - 20634357
Alignment:
Q  7 gggtagggttt-gggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactca 105  Q
    ||||||||||| ||||||||||||||||||  | |||||||||  |||||||||||| || ||||||||| |||| | |||||||| | |||||||| ||    
T  20634177 gggtagggttttgggtatgggttcggggtgagtgcatatatccctattacccgtctcatatccgtattttaaaattggggaaaactgaaactcataccca 20634276  T
Q  106 gacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
     ||  ||||||||  | |||||||  |||||||| ||||| |||| | | ||||||| | ||||||||||||||||| ||||    
T  20634277 aactaagtcaaattag-gaaaatctatcaaatcgaggttgatttgagagggtacccatgggcacgggttttgttgtcatgcc 20634357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 34259246 - 34259333
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaa 89  Q
    |||||||| ||||||||| ||| ||||| |||||| ||||||||||||| |||||||||  |||||| ||||||||||||||||||||    
T  34259246 cattcggggagggtttggatataggttcagggtgggtacatatatcctcgttacccgtccggtacccatattttgaaatcgaggaaaa 34259333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 5908776 - 5908634
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||| ||||||  ||||||||| | | ||||||||| | ||||||| ||| || |||| ||||||||||||| ||||| || |||||    
T  5908776 gggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaaccca 5908677  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
     |||||  || ||||| ||||||||| ||| |||||| |||||    
T  5908676 atcaaaatggggaaaacccgtcaaattgggtttggttcgggcg 5908634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 12773919 - 12773822
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactca 99  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||  | ||| ||||| |||||||||||||||||||||  |||||| || |||||    
T  12773919 cattcgggtagggtttgagtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaaactca 12773822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 4583120 - 4583262
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||||||| |||||||  || ||||| | | ||||||||| | ||||||| ||||||||||| ||||||| ||||| ||||  || |||||    
T  4583120 gggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatatccaaaccca 4583219  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
     ||||| ||| ||||| ||||||||| ||| |||||| |||||    
T  4583220 atcaaaacggggaaaacccgtcaaattgggtttggttcgggcg 4583262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 10127082 - 10127250
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| |||||       ||||||| | ||||||| |||||| |||| ||||||| ||||| ||||| || |||||    
T  10127082 gggtttgggtatgggttcggggtgggtacctatat-------acccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccca 10127174  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    |||||| ||| ||||| ||||||||| ||  |||||| |||||  || ||||| | | || |||||||||| ||||    
T  10127175 gtcaaaacggggaaaacccgtcaaattggatttggttcgggcggataaccacgggtatggattttgttgtcatgcc 10127250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 12866639 - 12866471
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||||||||| ||||| ||| ||||| |   ||||||||| | ||||| | |||||||||||  |||||||||||| ||||| || |||||    
T  12866639 gggtatgggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaatcggagaaaactcatacccatacccaaaccca 12866540  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||||  || ||||| ||||||||| ||  |||||| || || ||| |||| || | |||||||||||    
T  12866539 gtcaaaatggggaaaacccgtcaaattggatttggttcggacgggtaaccacatgtatgggttttgttg 12866471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 22694989 - 22694822
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| | ||| | | |||  |||| | |||||||||||||| |||| ||||| | ||||| ||||| || |||||    
T  22694989 gggtttgggtatgggttcggggtgggtacctctatacccgttagtcgtcccatacccgtattttgagatcggggaaacc-catacccatacccaaaccca 22694891  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    || ||| |||  ||| |||||||||| ||| |||||| ||||| ||| ||||| | | |||||||||||    
T  22694890 gttaaaacgggaaaattccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 22694822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 30996597 - 30996732
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||| || ||||||||||| ||| ||||| | | ||||| ||| | ||| ||| |||| ||||||  |||||| ||||||||||| || |||||    
T  30996597 gggtttgggtgtgtgttcggggtgggtacctatatacccgttacctgtcccatactcgtgttttaaaatcggagaaaacccatactcatacccaaaccca 30996696  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    |||||| ||| ||||||||||||||| ||| ||||||    
T  30996697 gtcaaaacgg-gaaaatccgtcaaattgggtttggtt 30996732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 6810149 - 6810247
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcat 100  Q
    ||||||||  ||||||||||||||||||||||||  ||| ||||||||| ||||||||  ||||||||| || | |||||| ||||||| || ||||||    
T  6810149 cattcgggatgggtttgggtatgggttcggggtgagtacttatatcctcgttacccgttccgtacccgtgttctaaaatcggggaaaacccaaactcat 6810247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 182
Target Start/End: Complemental strand, 29246039 - 29245869
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||||||| ||||||| ||| ||||| |   |||  |||| | ||||||| |||||||||||  |||||||||||| ||||| || ||| |    
T  29246039 gggtatgggtatgggtttggggtgggtacctatatacatgttattcgtcccatacccgtgttttgaaatcggagaaaactcatacccatacccaaaccta 29245940  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtc 182  Q
    |||||| ||| ||||| ||||||||| | | |||||| ||||| ||| || || | | |||||||||||||    
T  29245939 gtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccgcgggtatgggttttgttgtc 29245869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 33728071 - 33727921
Alignment:
Q  30 ggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatc 129  Q
    ||||||| ||| ||||| | | ||||||||| | ||||||| |||||| |||| ||||||  ||||| ||||  || ||||| ||||| ||| |||||||    
T  33728071 ggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaatccatacccatatccaaacccaatcaaaacggggaaaatc 33727972  T
Q  130 cgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||||| ||| |||||| ||||| ||| ||||| | | |||||||||||    
T  33727971 cgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 33727921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 20973581 - 20973416
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtc 114  Q
    |||||||||||||||||||||| ||| ||||| | | |||||| || | ||||||| |||  |||||| ||||||| ||||| ||||  || ||||||||    
T  20973581 tttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttgaaaatcggggaaaacccatacccataaccaaacccagtc 20973482  T
Q  115 aaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||| ||| ||||| |||||| |  ||| |||||| ||||| ||| || || | | |||||||||||    
T  20973481 aaaacggggaaaacccgtcagaatgggtttggttcgggcgggtaaccgcgggtatgggttttgttg 20973416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 40517807 - 40517932
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| ||||||||||||||||| ||  ||||| | | |||||| || | ||||||| |||||  |||| ||||||| ||||| ||||| || |||||    
T  40517807 gggtttgagtatgggttcggggtgggtaactatatacccgttacccatcccatacccgtgttttgggatcggggaaaacccatacccatacccaaaccca 40517906  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| |||  ||||||||||||||    
T  40517907 gtcaaaacgggaaaaatccgtcaaat 40517932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 12250961 - 12251041
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||| |||||||||||||||||||||| | |||| ||||||||||    |||||||||  ||||||||||||||||||||    
T  12250961 cattcaggtagggtttgggtatgggttcagagtgggtacatatatctctgttacccgtccggtacccgtattttgaaatcg 12251041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 6156003 - 6155883
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtc 114  Q
    |||||||||||||||||||||| ||||||||| |   ||||| |||   ||||||| ||||||||||| ||||||| || || ||||| || ||||||||    
T  6156003 tttgggtatgggttcggggtgggtacatatatacc--ttacctgtcctatacccgtgttttgaaatcggggaaaacccaaacacatacccaaacccagtc 6155906  T
Q  115 aaatcggagaaaatccgtcaaat 137  Q
    ||| || |||||| |||| ||||    
T  6155905 aaaacgaagaaaacccgttaaat 6155883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 15890208 - 15890382
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||||||||||| ||| ||| ||||| | | ||||||||| | ||||||| |||||||||||  |||||| ||||| ||||  || ||| |    
T  15890208 gggtatgggtatgggttcggg-tgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccatacacatagccaaaccta 15890306  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    |||||| |||  |||| ||||||||| ||  |||||| ||||| ||| || || | | ||||||||||||| ||||    
T  15890307 gtcaaaacgggaaaaacccgtcaaattggatttggttcgggcgggtaaccgcgagtatgggttttgttgtcatgcc 15890382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 180
Target Start/End: Complemental strand, 13402081 - 13401924
Alignment:
Q  23 tgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcgga 122  Q
    ||||||||| |||| ||| || || | | ||||||||  | ||||||| |||  |||||| | ||||||||||| ||||| || ||| ||||||| ||||    
T  13402081 tgggttcggagtgggtacctaaatacccgttacccgttccatacccgtgtttgaaaatcgggaaaaactcatacccatacccaaacctagtcaaaacgga 13401982  T
Q  123 gaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
     |||||||||||||| ||| |||||| ||||| ||| || || | | |||||||||||    
T  13401981 aaaaatccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttg 13401924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 16311372 - 16311256
Alignment:
Q  21 tatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcg 120  Q
    |||||||||||||||| ||| |||||||   ||| ||||||||||| ||| |||||||||||   |||||||| |||||||  || ||||| ||||| ||    
T  16311372 tatgggttcggggtgggtacctatatccctgttatccgtctcgtactcgtgttttgaaatcggaaaaaactcaaactcatatccaaacccaatcaaagcg 16311273  T
Q  121 gagaaaatccgtcaaat 137  Q
    |  |||| |||||||||    
T  16311272 ggaaaaaaccgtcaaat 16311256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 27900499 - 27900408
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactca 93  Q
    ||||||||  || |||||||||||||||| | ||| ||| ||||||| ||||||||||| | ||||| | ||||||||||| | ||||||||    
T  27900499 cattcggggcggatttgggtatgggttcgagatgggtacctatatccacattacccgtcccatacccatgttttgaaatcgggaaaaactca 27900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 34600298 - 34600257
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaactta 315  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  34600298 caacgaattcgttgacacctgatgtcaacggatcctaactta 34600257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 1554097 - 1554133
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    |||||||||||||||||||| ||||||||||||||||    
T  1554097 caacgaattcgttgacacctggtgtcaacggatccta 1554133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 6369705 - 6369780
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatac 96  Q
    ||||||||||||||||| ||||||||| | | |||||| || | ||| ||||||||||||||  |||||||||||||    
T  6369705 gtatgggttcggggtgggtacatatatacacgttaccc-tcccatactcgtattttgaaatcagggaaaactcatac 6369780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 10822608 - 10822544
Alignment:
Q  18 gggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||||||||||||||||| |||||||| || | |||||||||   ||||||| |||||||||||    
T  10822608 gggtatgggttcggggtgggtacatataaccccgttacccgtcctatacccgtgttttgaaatcg 10822544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 18207079 - 18207159
Alignment:
Q  72 ttttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttggg 152  Q
    ||||||||||||||||||| || |||||| | || ||||||||||| |||  ||||  |||||||| ||| ||||||||||    
T  18207079 ttttgaaatcgaggaaaacccaaactcatgcccaaacccagtcaaaacgggaaaaacacgtcaaattgggtttggtttggg 18207159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 32575036 - 32574948
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||||  |||||||||| |||||||||| ||| |||||||||||   |||||| || |||| | || ||||||||||| |||||||    
T  32575036 cattcggggcgggtttgggtttgggttcgggatgggtacatatatccatgttacccatcccgtatctgtgttttgaaatcggggaaaac 32574948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 33106032 - 33106072
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  33106032 aagtgggtgtagcttgctaacttgcaccttagtgtttttag 33106072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 38972923 - 38973047
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| ||||||||||||||||| ||| ||||| | | |||||  || | ||||| | ||||||||||| | ||||| || ||||||||  | |||||    
T  38972923 gggtttgagtatgggttcggggtgggtacctatattcccgttacctatcccatacccatgttttgaaatcgggaaaaacccaaactcatacctaaaccca 38973022  T
Q  112 gtcaaatcggagaaaatccgtcaaa 136  Q
    |||||| ||| ||||| | ||||||    
T  38973023 gtcaaaacggggaaaacctgtcaaa 38973047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 12773820 - 12773753
Alignment:
Q  113 tcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||||||| ||||| | |||||||||||||||||||||||| || |||| || |||||  |||||||    
T  12773820 tcaaatcggggaaaacctgtcaaatcggggttggtttgggcgggtgcccatgtacacggaatttgttg 12773753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 12834662 - 12834495
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||||||||||||| | ||| ||||| |   ||||||||| | || || | ||||||||| |  |||||| ||||| ||||| || |||||    
T  12834662 gggtatgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttgaaattggagaaaacccatacccatacccaaaccca 12834563  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgtt 179  Q
    ||||||  || ||||| ||||||||| | | |||||| || || ||| |||| || | ||||||||||    
T  12834562 gtcaaaatggggaaaacccgtcaaattgagtttggttcggacgggtaaccacatgtatgggttttgtt 12834495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 17071261 - 17071222
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  17071261 caacgaattcgttgacacctgatgtcaacggatcctaact 17071222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 17071808 - 17071847
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  17071808 caacgaattcgttaacacctggtgtcaacggatcctaact 17071847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 309
Target Start/End: Original strand, 19360490 - 19360525
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcct 309  Q
    |||||||||||||||||||| |||||||||||||||    
T  19360490 caacgaattcgttgacacctggtgtcaacggatcct 19360525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 19366580 - 19366619
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  19366580 caacgaattcattgacacctggtgtcaacggatcctaact 19366619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 308
Target Start/End: Complemental strand, 25858247 - 25858213
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcc 308  Q
    |||||||| ||||||||||||||||||||||||||    
T  25858247 caacgaatccgttgacacctagtgtcaacggatcc 25858213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 40187742 - 40187621
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagt 113  Q
    ||||||||||| ||| ||| || |||| ||||||  | |||||||||||| |||||| ||||||||| | ||||||| || ||||||   || |||||||    
T  40187742 gtttgggtatgagtttggg-tgaatacctatatctccgttacccgtctcgcacccgtgttttgaaattggggaaaacccaaactcatttccaaacccagt 40187644  T
Q  114 caaatcggagaaaatccgtcaaa 136  Q
    |||| ||  ||||| ||||||||    
T  40187643 caaagcgaggaaaacccgtcaaa 40187621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 17853380 - 17853256
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| ||||||||||||||| |||| ||  |||||   | ||||||||| | |||||||  |||||||||| ||||||| ||||  ||||| || |||||    
T  17853380 gggtatgggtatgggttcggagtgggtatctatatatccgttacccgtcccatacccgt-gtttgaaatcggggaaaacccatatccatacccaaaccca 17853282  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
     ||||| ||| ||||| |||||||||    
T  17853281 atcaaaacggggaaaacccgtcaaat 17853256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 38057609 - 38057646
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaa 311  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  38057609 caaccaatccgttgacacctagtgtcaacggatcctaa 38057646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 7632132 - 7632096
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  7632132 caacgaatccgttgacacctggtgtcaacggatccta 7632096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 10142214 - 10142174
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||||||||||| |||||||||||| |||||||    
T  10142214 aagtgggtgtagcttgctaatttacaccttagtatttttag 10142174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 14148952 - 14148912
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||| |||||||||||||||||||| |||||||    
T  14148952 aagtgggtgtaggttgctaacttacaccttagtatttttag 14148912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 18014479 - 18014519
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||| |||||||||||||||||||| |||||||    
T  18014479 aagtgggtgtaggttgctaacttacaccttagtatttttag 18014519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 29664962 - 29665042
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||||||  ||||||||||||| |||||  |||| ||| ||||||| | |||||| ||  |||||||| |||||||||||    
T  29664962 cattcgggacgggtttgggtatgagttcgaagtgggtacctatatccccgttacccatcatgtacccgtgttttgaaatcg 29665042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 32715516 - 32715476
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||||||||||||||||| |||| ||| |||||||||||||    
T  32715516 aagtaggtgtagcttgctcacttgcacattagtgtttttag 32715476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 32716097 - 32716137
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    ||||||||| ||||||||||||| || ||||||||||||||    
T  32716097 aagtaggtgcagcttgctaacttgcagcttagtgtttttag 32716137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 38006567 - 38006479
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||||  || |||||||||||||||||||||| ||| |||||     |||| |||| | ||||||||||||||||| | |||||||    
T  38006567 cattcgggacggatttgggtatgggttcggggtgggtacctatatatctgttacgcgtcccatacccgtattttgaaattggggaaaac 38006479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 2e-41; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 1772496 - 1772318
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||| || |  ||||||||||||| ||||||| |||||| || |  ||||    
T  1772496 cattcgggtagggtttgtgtatgagttcggggtgggtacatatatccgcattactcgccctgtacccgtattttaaaatcgaagaaaacccaaaaccata 1772397  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    | |||||||||||||||||| ||||||||||||||||||| |||||||||||  ||||||| | ||||  |||||||||    
T  1772396 cccagacccagtcaaatcggggaaaatccgtcaaatcgggattggtttgggcaggtacccatgggcacatgttttgttg 1772318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 39728672 - 39728840
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | |||||| || | |||||||||||||| ||||||||||||  |||||||||| || |||||    
T  39728672 gggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttgagatcgaggaaaacctatactcatacccaaaccca 39728771  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||||||||||||| ||  |||||| || || ||| ||||| | | |||||||||||    
T  39728772 gtcaaaacggggaaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgggttttgttg 39728840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 35687588 - 35687470
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||||||||||||| ||||||| || ||| | | ||||||||||    |||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  35687588 cattcgggtagggttttggtatggatttgggataggtacatatatcacagttacccgtctcgtacccgtattatgaaatcggggaaaactcaaactcata 35687489  T
Q  102 ctcagacccagtcaaatcg 120  Q
    |||| ||||||||||||||    
T  35687488 ctcaaacccagtcaaatcg 35687470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 49580065 - 49580240
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| ||||||||||| ||||| ||| ||||| ||| ||||||||| | ||||||| |||||| |||| ||||||| ||||| ||||| || |||||    
T  49580065 gggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccca 49580164  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    |||||| ||| ||||| ||||||||| ||  |||||| |||||  || ||||| | | ||||||||||||| ||||    
T  49580165 gtcaaaacggggaaaacccgtcaaattggatttggttcgggcggataaccacgggtatgggttttgttgtcatgcc 49580240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 7469865 - 7469697
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| ||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||  ||||||| ||||| ||||| || |||||    
T  7469865 gggtttgtgtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcagggaaaacccatacccatacccaaaccca 7469766  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||| ||||||||| ||| |||||| ||||| ||| ||||| | | |||||||||||    
T  7469765 gtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 7469697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 29284337 - 29284489
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||| ||| ||| ||||| | | ||||||||| | ||||||| ||| || |||| | ||||| ||||| ||||| || |||||    
T  29284337 gggtttgggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccatacccatacccaaaccca 29284436  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    |||||| ||||||||| ||||||||| ||| |||||| ||||| ||| |||||    
T  29284437 gtcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacg 29284489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 39655360 - 39655192
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||| ||||||| ||| ||||| |   ||||||||| | ||||||| |||||| |||| ||||||| ||||| ||||| || |||||    
T  39655360 gggtttgggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccca 39655261  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
     ||||| ||| ||||| ||||||||| ||| |||||| ||||| ||| ||||| | | |||||||||||    
T  39655260 atcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 39655192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 42243388 - 42243524
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||||||  || |||||||||| |||||||||| |||||| |||| ||||||| | ||||||||| | ||||| || |||||||| || |||||    
T  42243388 gggtttgggtatgaatttggggtggataaatatatcctcgttacccatctcatacccgtgtattgaaatcgggaaaaacccaaactcatacccaaaccca 42243487  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    |||||| ||| ||||| ||||||||| ||| ||||||    
T  42243488 gtcaaaccggggaaaacccgtcaaattgggtttggtt 42243524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 42758375 - 42758543
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||||||||||||||||| |||| ||||| |   ||||||||| | |||| || ||||||||||| || |||| || |||||||| || |||||    
T  42758375 gggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcgggggaaacccaaactcatacccaaaccca 42758474  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    || ||| ||| ||||||||||||||| ||| |||| | ||||| ||| ||||| | | |||||||||||    
T  42758475 gttaaaacggggaaaatccgtcaaattgggtttggatcgggcgggtaaccacgggtatgggttttgttg 42758543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 10043378 - 10043217
Alignment:
Q  3 attcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatac 102  Q
    |||||||  |||| |||||||||||||||||||| | |||||| || | ||||||||| | ||||| | |||||||| |  ||||||| || || |||||    
T  10043378 attcgggatgggtatgggtatgggttcggggtgggtgcatataaccccgttacccgtcccatacccatgttttgaaaccagggaaaacccaaacccatac 10043279  T
Q  103 tcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
     || |||||||||||  |||||||| ||||||||| ||||||||| ||| || |||||||||    
T  10043278 ccaaacccagtcaaagtggagaaaacccgtcaaattggggttggtatggtcgggtacccacg 10043217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 34154415 - 34154540
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||||||||||||||| ||| ||||| ||  |||||||| || ||||| | ||||||||||| ||||||| ||||| ||||  || |||||    
T  34154415 gggtatgggtatgggttcggggtgggtacctatattcttgttacccgtttcatacccatgttttgaaatcggggaaaacacatacccatatccaaaccca 34154514  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| ||| |||||||||||||||    
T  34154515 gtcaaaacggggaaaatccgtcaaat 34154540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 44172627 - 44172732
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| |||||| |||| ||||||| ||||| |||||||| |||||    
T  44172627 gggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatactcaaaccca 44172726  T
Q  112 gtcaaa 117  Q
    ||||||    
T  44172727 gtcaaa 44172732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 44179327 - 44179432
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| |||||| |||| ||||||| ||||| |||||||| |||||    
T  44179327 gggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatactcaaaccca 44179426  T
Q  112 gtcaaa 117  Q
    ||||||    
T  44179427 gtcaaa 44179432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 48390904 - 48390779
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| ||||||||||||| || ||| ||| ||||| | | ||||||||| | ||||||| ||||||||||| ||||||| ||||| ||||| || |||||    
T  48390904 gggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaaccca 48390805  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| ||| |||||||||||||||    
T  48390804 gtcaaaacggggaaaatccgtcaaat 48390779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 54317145 - 54317297
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||| ||||||||||||||| ||| ||||| | | |||||||||   |||  || ||||||||||| |||||||||| || |||||||| |||||    
T  54317145 gggtttgggaatgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatcggggaaaactcaaacacatactcaaaccca 54317244  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
    |||||| ||| ||||| ||||||||| ||  |||||| ||||| ||| |||||    
T  54317245 gtcaaaacggggaaaacccgtcaaattggatttggttcgggcgggtaaccacg 54317297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 43582618 - 43582720
Alignment:
Q  52 ttacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgg 151  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||| |||||||| ||||||| ||| ||||||||| || |||||| ||  |||||| ||    
T  43582618 ttacccgtctcatacccgtgttttgaaatcggggaaaactcatacacatactcaaacccagtaaaaacggagaaaacccatcaaattggatttggttcgg 43582717  T
Q  152 gcg 154  Q
    |||    
T  43582718 gcg 43582720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 52198156 - 52198298
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | |||| || |||||| |||| | ||||| ||||| ||||| || |||||    
T  52198156 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttgagatcgggaaaaacccatacccatacccaaaccca 52198255  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    |||||| | || |||| |||||||||  || ||||||||||||    
T  52198256 gtcaaaacagaaaaaacccgtcaaattaggtttggtttgggcg 52198298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 187
Target Start/End: Complemental strand, 4557389 - 4557217
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtc 114  Q
    |||||||||||||||||||||| ||| ||||| ||| ||||||||| | ||||| | |||||||| || ||||||| || || ||||| || ||||||||    
T  4557389 tttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaacggggaaaacccaaacccatacccaaacccagtc 4557290  T
Q  115 aaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    ||| |||  |||| ||||||||| ||| || ||| ||| | ||| ||||| | | | ||||||||||| ||||    
T  4557289 aaaacgggaaaaacccgtcaaattgggttttgttcgggtgggtaaccacgggtatgagttttgttgtcatgcc 4557217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 40796234 - 40796154
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||| |||| ||||||||||||  || ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||    
T  40796234 cattccggtaaggtttgggtatgactttggggtgggtacatgtatcctcattacccgtcccgtacccgtattttgaaatcg 40796154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 23910297 - 23910214
Alignment:
Q  54 acccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaat 137  Q
    |||| |||| || |||| |||||||||||||||||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  23910297 acccatctcatatccgtgttttgaaatcgaggaaaactcaaactcatacacaaacccagtcaaaacggaaaaaatccgtcaaat 23910214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 34025955 - 34026080
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||| |||||||||||| || ||||| ||| ||||||||| | |||| || ||||||||||| ||||||| ||||| ||||  || |||||    
T  34025955 gggtatgggtatgagttcggggtggaaacctatatactcgttacccgtcccatacctgtgttttgaaatcggggaaaacccatacccatatccaaaccca 34026054  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| |||  |||| |||||||||    
T  34026055 gtcaaaacgggaaaaaaccgtcaaat 34026080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 44252748 - 44252873
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| |   |||| |||| | ||||||| ||| || |||| ||||||| ||||| ||||| || |||||    
T  44252748 gggtttgggtatgggttcggggtgggtacctatatacctgttacacgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaaccca 44252847  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| ||| ||||| |||||||||    
T  44252848 gtcaaaacggggaaaacccgtcaaat 44252873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 2490333 - 2490417
Alignment:
Q  39 acatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggag 123  Q
    |||||||||| ||||||||||   |||||||||||||||||||| |||||||||| || ||||  || |||||||||||||||||    
T  2490333 acatatatccccattacccgttctgtacccgtattttgaaatcggggaaaactcaaacccatatccaaacccagtcaaatcggag 2490417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 23580833 - 23580953
Alignment:
Q  17 tgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaa 116  Q
    ||||||||||||||| |||| ||| ||||| | | |||||||| || ||| ||| ||||||||| | ||||||||||||| ||||| || ||||||||||    
T  23580833 tgggtatgggttcggagtgggtacctatatacccgttacccgtttcatactcgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaa 23580932  T
Q  117 atcggagaaaatccgtcaaat 137  Q
    | |||  |||| |||||||||    
T  23580933 aacgggaaaaacccgtcaaat 23580953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 30616368 - 30616200
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||||||||||||||| || ||||| |||| ||||||||| | || |||| ||||||||||| ||||||| || || |||||||| |  ||    
T  30616368 gggtatgggtatgggttcggggtggttatatataacctcgttacccgtcccatatccgtgttttgaaatcggggaaaacccaaacccatactcaaattca 30616269  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| |||  |||| || ||||| | |||| ||| |||| | ||||||| | | |||||| ||||||    
T  30616268 gtcaaaacgggaaaaacccctcaaaccagggtgggtctgggtgggtacccatggggacgggtattgttg 30616200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 44953522 - 44953386
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| ||||| ||||||||||  ||| ||||| | | ||||||||| | ||||||| |||||| |||| ||||||| ||||| || || || |||||    
T  44953522 gggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccaaacccaaaccca 44953423  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    |||||| ||| ||||| ||||||||| ||| ||||||    
T  44953422 gtcaaaacggggaaaacccgtcaaattgggtttggtt 44953386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 52572618 - 52572778
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    |||||| |||||||||| | | ||||| | | ||||||||| | ||||||| |||||| |||||||||||||||||| ||||| || |||||||||||      
T  52572618 gtatggattcggggtgggtccctatatacccgttacccgtcccatacccgtgttttgagatcgaggaaaactcatacccatacccaaacccagtcaaaat 52572717  T
Q  120 ggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    || ||||| | ||||||| | | |||||| |||||  || ||||| | | |||||||||||    
T  52572718 ggggaaaacctgtcaaattgagtttggttcgggcggataaccacgggtatgggttttgttg 52572778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 34119660 - 34119782
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtc 114  Q
    |||||||||||||||||||||| ||| ||||| |   ||| ||||||| ||||||| |||| |||||| | |||||||| |||||||| || ||||| ||    
T  34119660 tttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaatcgggaaaaactcaaactcatacccaaacccaatc 34119759  T
Q  115 aaatcggagaaaatccgtcaaat 137  Q
    |||  || ||||| |||||||||    
T  34119760 aaaatggggaaaacccgtcaaat 34119782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 309
Target Start/End: Original strand, 37520540 - 37520611
Alignment:
Q  232 ttagattaaatgagattgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcct 309  Q
    ||||||||||| ||||||||||||||||||||||||      |||||||||||||||||||| || ||||||||||||    
T  37520540 ttagattaaataagattgatggttgagatttggtgt------caacgaattcgttgacacctggtatcaacggatcct 37520611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 20087050 - 20087123
Alignment:
Q  64 tacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaat 137  Q
    ||||||| ||||||||||| ||||||| ||||| ||||  || ||||||||||| |||||||||||||||||||    
T  20087050 tacccgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaat 20087123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 44639275 - 44639380
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| |||||| ||   ||||||| ||||| ||||| || |||||    
T  44639275 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatatgggaaaacccatacccatacccaaaccca 44639374  T
Q  112 gtcaaa 117  Q
    ||||||    
T  44639375 gtcaaa 44639380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 19111735 - 19111887
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||| |||||||  |||||| ||| ||||| | | ||| || || ||||||||| ||||||||||| | |||||||| |||||||| || |||||    
T  19111735 gggtttgggcatgggtttagggtgggtacttatatacccgttatccatcccgtacccgtgttttgaaatcgggaaaaactcaaactcatacccaaaccca 19111834  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacg 164  Q
     |||||  ||  |||||||||||||| ||  ||||||| || ||||| |||||    
T  19111835 atcaaaaagggaaaaatccgtcaaattggatttggtttaggtgagtaaccacg 19111887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 22535920 - 22535786
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    ||||||||||||||||| | | | ||| | | ||||||||| | || |||| ||||||||| | ||||||||||||| ||||| || ||||||||||| |    
T  22535920 gtatgggttcggggtgggtgcctgtatacccgttacccgtcccatatccgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaac 22535821  T
Q  120 ggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    || ||||| || |||||| | | |||||| |||||    
T  22535820 ggggaaaacccatcaaattgagtttggttcgggcg 22535786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 831013 - 831178
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtc 114  Q
    ||||||||||||||| |||||| |||  |||| ||| ||| ||||||| ||||||| |||||||| || |||||     ||| ||||| || ||||||||    
T  831013 tttgggtatgggttcagggtgggtacc-atatactcgttatccgtctcatacccgtgttttgaaaacg-ggaaa-----tacccatacccaaacccagtc 831105  T
Q  115 aaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
    ||| ||| ||||| |||||||||  || |||||||||||| ||| |||||   | | ||||||||||||||||    
T  831106 aaaacggggaaaacccgtcaaatttggtttggtttgggcgggtaaccacggatatgagttttgttgtcttgcc 831178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 23154143 - 23154016
Alignment:
Q  20 gtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatc 119  Q
    |||||||||||| |||| ||| ||||| ||| ||||||||  | |||||||  |||||||||| ||||||| ||||| ||||| || || |||| ||| |    
T  23154143 gtatgggttcggagtgggtacctatatactcgttacccgttccatacccgt-gtttgaaatcggggaaaacccatacccatacccaaactcagttaaaac 23154045  T
Q  120 ggagaaaatccgtcaaatcggggttggtt 148  Q
    ||  |||| ||||||||| ||||||||||    
T  23154044 gggaaaaacccgtcaaattggggttggtt 23154016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 48305728 - 48305592
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||||||||| |||||||||||| ||| ||||| | |  ||| |||  | ||||||| ||||||||| | ||||||||||||| ||||  || |||||    
T  48305728 gggtttgggtataggttcggggtgggtacctatatacccgatactcgttccatacccgtgttttgaaattggggaaaactcatacccataaccaaaccca 48305629  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    ||||||  || ||||| |||||| || ||| ||||||    
T  48305628 gtcaaaatggggaaaacccgtcagattgggtttggtt 48305592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 4016129 - 4016006
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagt 113  Q
    |||||||||||||||||| |||| ||| ||||| | | ||| ||||| | ||||| | ||||||||||| ||||||| || || ||||| || ||| |||    
T  4016129 gtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaaacccatacccaaacctagt 4016030  T
Q  114 caaatcggagaaaatccgtcaaat 137  Q
    |||| |||  |||| |||||||||    
T  4016029 caaaacgggaaaaacccgtcaaat 4016006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 6738440 - 6738350
Alignment:
Q  64 tacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    ||||||| ||||||||||| ||||||| ||||| ||||| || ||||||||||| |||  |||| | ||||||| ||| |||||| |||||    
T  6738440 tacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaacctgtcaaattgggtttggttcgggcg 6738350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 23547027 - 23546945
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatac 96  Q
    ||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||| ||||||| |||||    
T  23547027 gtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatac 23546945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 30904899 - 30904834
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatc 81  Q
    |||||||||||||||||||||| ||| ||||||| |  |||||||| ||||||||| ||||||||||    
T  30904899 tttgggtatgggttcggggtgggtacctatatcc-ccgtacccgtcccgtacccgtgttttgaaatc 30904834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 42371130 - 42371081
Alignment:
Q  349 gctgctaatttacaccaccccaaaatagtaaggtgcaagttagcaagcta 398  Q
    |||||||| ||||||||||  |||||| ||||||||||||||||||||||    
T  42371130 gctgctaacttacaccacctaaaaatactaaggtgcaagttagcaagcta 42371081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 44106879 - 44106756
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| ||||||||||||||| ||||| |||||   | |||| |||| | ||||||| |||| | || | ||||||| ||||||||||| || |||||    
T  44106879 gggtttgagtatgggttcggggtagatacctatatatccgttacgcgtcccatacccgtgttttaagattggggaaaac-catactcatacccaaaccca 44106781  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| ||| ||||| |||||||||    
T  44106780 gtcaaaacggggaaaa-ccgtcaaat 44106756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 45393949 - 45393990
Alignment:
Q  232 ttagattaaatgagattgatggttgagatttggtgtcaacga 273  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  45393949 ttagattaaataaaattgatggttgagatttggtgtcaacga 45393990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 2487792 - 2487828
Alignment:
Q  8 ggtagggtttgggtatgggttcggggtggatacatat 44  Q
    ||||||||||||||||||||||||||||| |||||||    
T  2487792 ggtagggtttgggtatgggttcggggtgggtacatat 2487828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 31153726 - 31153766
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  31153726 aagtgggtgtagcttgctaacttgcaccttagtgtttttag 31153766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 46150726 - 46150779
Alignment:
Q  250 atggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcct 309  Q
    ||||||||||||||||||||||||      || |||||||||||||||||||||||||||    
T  46150726 atggttgagatttggtgtcaacga------atccgttgacacctagtgtcaacggatcct 46150779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 4553191 - 4553306
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| ||||||||||||||||  ||  |||||||  |||||||||  || |||| | ||||||||||| | |||||||| || |||||  |  ||||    
T  4553191 gggtttgagtatgggttcggggtgtgtatttatatccctattacccgttccgcacccatgttttgaaatcgggaaaaactcaaacgcatacctaagccca 4553290  T
Q  112 gtcaaatcggagaaaa 127  Q
    |||||| |||||||||    
T  4553291 gtcaaagcggagaaaa 4553306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 309
Target Start/End: Complemental strand, 14871191 - 14871156
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcct 309  Q
    |||||||||||||||||||| |||||||||||||||    
T  14871191 caacgaattcgttgacacctggtgtcaacggatcct 14871156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 309
Target Start/End: Complemental strand, 27082814 - 27082779
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcct 309  Q
    |||||||||||||||||||||||||||| |||||||    
T  27082814 caacgaattcgttgacacctagtgtcaatggatcct 27082779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 471
Target Start/End: Complemental strand, 45713758 - 45713723
Alignment:
Q  436 ggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||||||||||||||||| |||||||||||||||||    
T  45713758 ggtgtagcttgctaacttgcaccttagtgtttttag 45713723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 53631907 - 53632030
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagt 113  Q
    ||||| ||||||||||||||||| ||| ||||| | | ||||||||||| ||| ||| |||| ||||   |||||||||| || |||||  | ||||| |    
T  53631907 gtttgagtatgggttcggggtgggtacctatatacccgttacccgtctcatacacgtgttttaaaatttgggaaaactcaaacccatacctatacccatt 53632006  T
Q  114 caaatcggagaaaatccgtcaaat 137  Q
    |||| ||  ||||| |||||||||    
T  53632007 caaaacgaggaaaacccgtcaaat 53632030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 397
Target Start/End: Original strand, 6746462 - 6746519
Alignment:
Q  341 atataggggctgctaatttacacc-accccaaaatagtaaggtgcaagttagcaagct 397  Q
    |||||||||||||||| ||||||| |||  |||| | |||||||||||||||||||||    
T  6746462 atataggggctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagct 6746519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 468
Target Start/End: Original strand, 8814654 - 8814691
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttt 468  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  8814654 aagtgggtgcagcttgctaacttacaccttagtgtttt 8814691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 8949973 - 8949932
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaactta 315  Q
    ||||| |||||||||||| | |||||||||||||||||||||    
T  8949973 caacggattcgttgacacatggtgtcaacggatcctaactta 8949932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 29858567 - 29858494
Alignment:
Q  107 acccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||||||||| ||| |||||||||| |||| ||| |||||| ||||| ||| ||||| | | |||||||||||    
T  29858567 acccagtcaaaacggggaaaatccgttaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 29858494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 93421 - 93381
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||| |||||||||||||||||||| |||||||    
T  93421 aagtgggtgtaggttgctaacttacaccttagtatttttag 93381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 981705 - 981673
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggat 306  Q
    |||||||||||||||||||| ||||||||||||    
T  981705 caacgaattcgttgacacctggtgtcaacggat 981673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 438 - 470
Target Start/End: Complemental strand, 4968439 - 4968407
Alignment:
Q  438 tgtagcttgctaacttacaccttagtgttttta 470  Q
    ||||||||||||| |||||||||||||||||||    
T  4968439 tgtagcttgctaatttacaccttagtgttttta 4968407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 6746529 - 6746489
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| |||| ||||||||||||| |||||||||||||||||    
T  6746529 aagtgggtgcagcttgctaacttgcaccttagtgtttttag 6746489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 17146247 - 17146203
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatat 46  Q
    |||| ||| |||||||| ||||||||||||||||||||| |||||    
T  17146247 catttgggaagggtttgtgtatgggttcggggtggatacctatat 17146203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 17603206 - 17603170
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  17603206 caacgaatccgttgacacctggtgtcaacggatccta 17603170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 20213018 - 20212986
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggat 306  Q
    |||||||||||||||||||| ||||||||||||    
T  20213018 caacgaattcgttgacacctggtgtcaacggat 20212986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 27065540 - 27065580
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||||||||||| |||||||||| |||||||||    
T  27065540 aagtgggtgtagcttgctaatttacaccttactgtttttag 27065580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 101
Target Start/End: Original strand, 40890402 - 40890430
Alignment:
Q  73 tttgaaatcgaggaaaactcatactcata 101  Q
    |||||||||||||||||||||||||||||    
T  40890402 tttgaaatcgaggaaaactcatactcata 40890430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 52605501 - 52605533
Alignment:
Q  277 cgaattcgttgacacctagtgtcaacggatcct 309  Q
    ||||||||||||||||| |||||||||||||||    
T  52605501 cgaattcgttgacacctggtgtcaacggatcct 52605533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 4e-39; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 30978919 - 30979094
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||| | ||||| || |||||||    
T  30978919 catttgggtagggtttgggtatgggttcggggtggatacatatatcctcgttatcc-tc-cgtacccgtattttgaaatcgggaaaaacccaaactcata 30979016  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
     ||| ||||||||||||  || ||||||||| |||||||||||| |||||||| ||||||| |  || |||||||||||    
T  30979017 ttcaaacccagtcaaat-tgaaaaaatccgttaaatcggggttgatttgggcgggtacccatggacatgggttttgttg 30979094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 44057874 - 44058025
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcgggg-tggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcat 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||| |||||| |||||||||||||  ||||||  || |||| |    
T  44057874 cattcgggtagggtttgggtatgggttcgggggtgggtacatatatccccattacccgtcccgtaccggtattttgaaatcagggaaaatccaaactcgt 44057973  T
Q  101 actcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttggg 152  Q
    || || |||||||||||| ||| ||||  |||||||||||||||||||||||    
T  44057974 acccaaacccagtcaaattggaaaaaactcgtcaaatcggggttggtttggg 44058025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 4427916 - 4428093
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||  | || |||||| | |||||||||| |||| ||| ||||||| || || ||||    
T  4427916 cattcgggtagggtttgggtatgggttcgaggtggatccatatatcaccgttgcccgtcccttacccgtattatgaagtcggggaaaacccaaacccata 4428015  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgtt 179  Q
    |||| |  ||||||||| ||  |||| |||| |||||||||||| ||||| ||  |||||| | ||||||||||||||    
T  4428016 ctcaaattcagtcaaattgggaaaaacccgttaaatcggggttgatttggacggatacccatgagcacgggttttgtt 4428093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 9632388 - 9632556
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||||||| | ||||||| ||| || |||| ||||||| ||||| |||||||| |||||    
T  9632388 gggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatactcaaaccca 9632487  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
     ||||| |||  |||| ||||||||| | | |||||| ||||| ||| ||||| | | |||||||||||    
T  9632488 ttcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtatgggttttgttg 9632556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 30846948 - 30847116
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||| ||||||| ||||| ||||| || |||||    
T  30846948 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaaccca 30847047  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| ||||| ||||||||| ||| |||||| ||||| ||| ||||| | | |||||||||||    
T  30847048 gtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 30847116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 38342616 - 38342500
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||| ||||||||| |||||| |||||||||| || ||||    
T  38342616 cattcgggtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaacccata 38342517  T
Q  102 ctcagacccagtcaaat 118  Q
      || ||||| ||||||    
T  38342516 tccaaacccaatcaaat 38342500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 14331519 - 14331691
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| | ||||||||| | |||| ||||||| |||| | |||||      || ||||    
T  14331519 cattcgggtagggtttgggtatgggttcggagtgggtacatatatccccgttacccgtcccatacctgtatttttaaataggggaaa------acccata 14331612  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    | || ||| ||||||| ||| ||||| |||||||||||| | ||||||||| | ||||||| | |||||||||||||||    
T  14331613 cccaaacctagtcaaaccggggaaaacccgtcaaatcggagctggtttgggtgggtacccatgggcacgggttttgttg 14331691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 26755794 - 26755917
Alignment:
Q  64 tacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccac 163  Q
    ||||| |||||| ||||||| |||||| || |||||||| || |||||||||||||||  |||| |||||||||||||||||||||||||  |||||||     
T  26755794 tacccatattttaaaatcgaagaaaacccaaactcatacccaaacccagtcaaatcgggaaaaacccgtcaaatcggggttggtttgggcaggtacccat 26755893  T
Q  164 gtgcacgggttttgttgtcttgcc 187  Q
    | ||||||||||||||||| ||||    
T  26755894 gggcacgggttttgttgtcatgcc 26755917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 43371545 - 43371661
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||||||| | ||||||||| |||||||||||||| |||||| |||||||||| ||  |||    
T  43371545 cattcgggtagggtttgggtatgagtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaaccaata 43371644  T
Q  102 ctcagacccagtcaaat 118  Q
    | || || |||||||||    
T  43371645 cccaaactcagtcaaat 43371661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 45256825 - 45256943
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||| |||||||||||||||||| ||| ||||| | ||||| ||||||| ||||||| ||||||||||| ||||||||||||||||||  || |||||    
T  45256825 gggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaatcggggaaaactcatactcatatccacaccca 45256924  T
Q  112 gtcaaatcggagaaaatcc 130  Q
    |||||| |||  |||||||    
T  45256925 gtcaaaacgggaaaaatcc 45256943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 182
Target Start/End: Original strand, 13830739 - 13830907
Alignment:
Q  13 ggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccag 112  Q
    |||||| ||||||||||||||||| ||| ||||| | | ||||| ||| | ||||||| |||||| |||||||||||| ||||| ||||| || ||||||    
T  13830739 ggtttgagtatgggttcggggtgggtacttatatacccgttacc-gtcccatacccgtgttttgagatcgaggaaaacccatacccatacccaaacccag 13830837  T
Q  113 tcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtc 182  Q
    |||||  || ||||| ||||||||| ||| |||||| ||||| ||| ||||| | | |||||||||||||    
T  13830838 tcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgtc 13830907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 3547158 - 3547238
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||  | ||||||||| |||||||||||||||||||||    
T  3547158 cattcgggtagggtttggatatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcg 3547238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 37106700 - 37106869
Alignment:
Q  18 gggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaa 117  Q
    |||||||||||||| |||| ||| ||||| | | ||||||||| | ||||||| ||||||||||| ||||||| ||||| ||||| || || ||||||||    
T  37106700 gggtatgggttcggagtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaa 37106799  T
Q  118 tcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
     ||| ||||| ||||||||| ||| |||||| ||||| ||| || || | | | ||||||||||| ||||    
T  37106800 acggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgagtatgagttttgttgtcatgcc 37106869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 24414219 - 24414051
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||| ||| ||||| |   ||||||||| | ||||||| |||||| |||| |||||||  |||| ||||| || |||||    
T  24414219 gggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccgatacccatacccaaaccca 24414120  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
     ||||| ||| ||||| ||||||||| ||| |||||| ||||| ||| ||||  | | |||||||||||    
T  24414119 atcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacaggtatgggttttgttg 24414051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 36128193 - 36128025
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||||  ||| ||||| | | |||||| || | ||||||| ||| || |||| ||||| | ||||| ||||| || |||||    
T  36128193 gggtttgggtatgggttcggggtgagtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaccacatacccatacccaaaccca 36128094  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||| ||| |||||||||||||||  || |||||| || |||||| ||||| | | |||||||||||    
T  36128093 gtcaaaacggggaaaatccgtcaaattaggtttggttcggacgagtaaccacgggtatgggttttgttg 36128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 7314735 - 7314593
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| ||||||||||||||||||||  || ||||| | | ||||||||| | ||| |||||||| |||||| ||||||| ||||| ||||  || |||||    
T  7314735 gggtgtgggtatgggttcggggtgggaacctatatacccgttacccgtcccatactcgtattttaaaatcggggaaaacccatacccatatccaaaccca 7314636  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
    |||||| ||| ||||||||||||||| | | |||||| |||||    
T  7314635 gtcaaaacggggaaaatccgtcaaattgagtttggttcgggcg 7314593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 15546736 - 15546896
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||| ||| ||||| ||||||||||||| |||||| || ||||| ||   ||||||||| | ||||||| ||||||||||| ||||||| || || |||     
T  15546736 catttgggaagggtatgggtatgggttcagggtgggtatatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatg 15546835  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtaccca 162  Q
    | |||| ||||||||| ||| |||||  |||||||| |||||  ||||||||| |||||||    
T  15546836 cccagatccagtcaaagcggggaaaactcgtcaaatgggggtgagtttgggcgggtaccca 15546896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 24051705 - 24051561
Alignment:
Q  18 gggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaa 117  Q
    ||||||||||||||||| | |||||||||||   ||||||||| | ||| |||||||| ||||||  |||| | || || ||||| || ||||| | |||    
T  24051705 gggtatgggttcggggtaggtacatatatccctgttacccgtcccatactcgtattttaaaatcggagaaatcccaaacccatacccaaacccaattaaa 24051606  T
Q  118 tcggagaaaatccgtcaaatcggggttggtttgggcgagtaccca 162  Q
    ||||||||||||| ||||||||| |||| |||||||  |||||||    
T  24051605 tcggagaaaatccatcaaatcggagttgatttgggcaggtaccca 24051561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 13705448 - 13705349
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||||| |||||||||||||||||| ||| ||||| | | ||||| ||||| ||||||| ||||||||||| ||||||||||||| ||||| || |||||    
T  13705448 gggtttaggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaactcatacccatacccataccca 13705349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 137
Target Start/End: Original strand, 45115569 - 45115687
Alignment:
Q  21 tatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactc--atactcatactcagacccagtcaaat 118  Q
    |||||||||||| ||| ||| ||||| |   ||||||||||| ||||||| |||||||||||||||||||||  |||| ||||| || |||||||||||     
T  45115569 tatgggttcgggatgggtacctatatacctgttacccgtctcatacccgtgttttgaaatcgaggaaaactcatatacccatacccaaacccagtcaaaa 45115668  T
Q  119 cggagaaaatccgtcaaat 137  Q
    ||| ||||| |||||||||    
T  45115669 cggggaaaacccgtcaaat 45115687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 18485640 - 18485724
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgagga 86  Q
    |||| ||||| ||||||||||||||||| |||||| ||||||||||| | ||||||||   ||||||||||||| ||||||||||    
T  18485640 catttgggtaaggtttgggtatgggttcagggtgggtacatatatccccgttacccgtactgtacccgtattttaaaatcgagga 18485724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 22900796 - 22900964
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| |||||||| ||||||||||| || ||||| || | |||| |||| | ||||||| ||||||||||| | ||||| || || ||||| |||||| |    
T  22900796 gggtatgggtatgagttcggggtgggtatatataaccccgttactcgtcccatacccgtgttttgaaatcgggaaaaacccaaacccatacccagaccaa 22900895  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||||  |  ||||| ||||||||||||| | |||| ||||| ||||||| | | |||||| ||||||    
T  22900896 gtcaaagtgaggaaaacccgtcaaatcgggatgggttagggcgggtacccatgaggacgggtattgttg 22900964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 37472840 - 37472704
Alignment:
Q  18 gggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaa 117  Q
    |||||||||||||  |||| ||| || || | | ||||||||| | ||||||| ||||||||||| ||||||  ||||||||||| || |||||||||||    
T  37472840 gggtatgggttcgaagtgggtacctaaatacccgttacccgtcccatacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaa 37472741  T
Q  118 tcggagaaaatccgtcaaatcggggttggtttgggcg 154  Q
     ||| ||||| ||||||||| | | |||||| |||||    
T  37472740 acggggaaaacccgtcaaattgagtttggttcgggcg 37472704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 182
Target Start/End: Complemental strand, 31942272 - 31942102
Alignment:
Q  13 ggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtatttt-gaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| |||||||| ||||||| ||| ||||| |   ||||||||||| ||||||| |||| ||||||||||| ||| || || ||||  || |||||    
T  31942272 ggtttggttatgggtttggggtgggtacttatatacctgttacccgtctcatacccgtgtttttgaaatcgaggataacccaaacccatatccaaaccca 31942173  T
Q  112 gtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtc 182  Q
    |||||| |||  |||| || |||||| | | |||||||||||| ||| ||||| | | |||||||||||||    
T  31942172 gtcaaagcgggaaaaacccatcaaattgagtttggtttgggcgggtaaccacgggtatgggttttgttgtc 31942102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 37999485 - 37999575
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatac 102  Q
    ||||||||||||| ||||||||||| ||| ||||| | | ||||||||||| ||||||| |||||| |||| ||||||| ||||| |||||    
T  37999485 gggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttgagatcggggaaaacccatacccatac 37999575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 1297104 - 1297176
Alignment:
Q  235 gattaaatgagattgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| | ||||||||||||||||||||||||||||      || ||||||||||| |||||||||||||||||||    
T  1297104 gattaaataaaattgatggttgagatttggtgtcaacga------atccgttgacacctggtgtcaacggatcctaact 1297176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 6164569 - 6164482
Alignment:
Q  3 attcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||||||||| | |||||| ||||||||||| ||||||||||  | ||||||||| |||||||  |||||||||| | |||||||    
T  6164569 attcgggtagggtctaggtatgagttcggggtgggtacatatatcaccgttacccgtcccgtacccaaattttgaaattggggaaaac 6164482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 9275657 - 9275585
Alignment:
Q  235 gattaaatgagattgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||| | ||||||||||||||||||||||||||||      || ||||||||||| |||||||||||||||||||    
T  9275657 gattaaataaaattgatggttgagatttggtgtcaacga------atccgttgacacctggtgtcaacggatcctaact 9275585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 35965327 - 35965417
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactca 93  Q
    ||||||||  |||||||||||||||||||| |||| ||||| ||||| |||||| | || | ||||||| ||||||||||| ||||||||||    
T  35965327 cattcgggacgggtttgggtatgggttcggagtgggtacatgtatccccattacacatc-catacccgtgttttgaaatcggggaaaactca 35965417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 35248472 - 35248394
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||||||||||||||||||||| ||| | ||||| | ||||||||| | ||||||| ||||| ||||| |||||||    
T  35248472 gggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaac 35248394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 309
Target Start/End: Complemental strand, 1296480 - 1296382
Alignment:
Q  205 atagaaacatgaactaattataagtcattagattaaatgagattgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacgg 304  Q
    ||||||| ||| | |||||| ||| | || |||||||  | ||||||||||||||||||||||||||||      |||||||||||||| ||||||||||    
T  1296480 atagaaatatggattaattacaagccttttgattaaaaaaaattgatggttgagatttggtgtcaacga------attcgttgacacctggtgtcaacgg 1296387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 8916024 - 8915900
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| ||||||||||||||||| ||| ||||| |   ||||||||| | ||||||| |||||| ||||| |||||| ||||| ||||  || || ||    
T  8916024 gggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcga-gaaaacccatacccatatccaaactca 8915926  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
    |||||| |||  ||||||||||||||    
T  8915925 gtcaaaacgggaaaaatccgtcaaat 8915900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 309
Target Start/End: Original strand, 9276281 - 9276379
Alignment:
Q  205 atagaaacatgaactaattataagtcattagattaaatgagattgatggttgagatttggtgtcaacgacaacgaattcgttgacacctagtgtcaacgg 304  Q
    ||||||| ||| | |||||| ||| | || |||||||  | ||||||||||||||||||||||||||      |||||||||||||||| ||||||||||    
T  9276281 atagaaatatggattaattacaagccttttgattaaaaaaaattgatggttgagatttggtgtcaac------gaattcgttgacacctggtgtcaacgg 9276374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 10212415 - 10212583
Alignment:
Q  18 gggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaa 117  Q
    ||||||||||| |||||||  ||| ||| || | ||||| ||| |||| |||| ||| ||||||| ||||||| || ||||||||  | |||||||||||    
T  10212415 gggtatgggtt-ggggtggtcacacataaccccgttacctgtcccgtaaccgtgtttggaaatcggggaaaacccaaactcataccaaaacccagtcaaa 10212513  T
Q  118 tcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttgtcttgcc 187  Q
     | |  ||||  |||||||||||||| ||| |||||| ||||||||  | |||||| |||||||| ||||    
T  10212514 acaggaaaaactcgtcaaatcggggtgggtatgggcgggtacccacaggtacgggtattgttgtcatgcc 10212583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 25210369 - 25210442
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtatttt 75  Q
    ||||||||  |||||| |||||||||| ||||||| ||||||||||||| ||||||||| | ||||||| ||||    
T  25210369 cattcgggaggggttttggtatgggtttggggtgggtacatatatcctcgttacccgtcccatacccgtgtttt 25210442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 10208516 - 10208393
Alignment:
Q  13 ggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccag 112  Q
    |||||| ||||||||||||||| | ||| |||||   ||||||||||| | ||||||| |||| | || | ||||||| ||||| ||||| || ||||||    
T  10208516 ggtttgagtatgggttcggggtaggtacctatatatccattacccgtcccatacccgtgttttaagattggggaaaacccatacccatacccaaacccag 10208417  T
Q  113 tcaaatcggagaaaatccgtcaaat 137  Q
    ||||| ||| ||||| |||||||||    
T  10208416 tcaaaacggggaaaa-ccgtcaaat 10208393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 30696927 - 30697031
Alignment:
Q  13 ggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccag 112  Q
    |||||||||||| ||||||||||| ||||||||||    |||||||||||||| || | |||| ||||| | ||||||  | || |||||||| ||||||    
T  30696927 ggtttgggtatgagttcggggtgggtacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccag 30697026  T
Q  113 tcaaa 117  Q
    |||||    
T  30697027 tcaaa 30697031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 431 - 470
Target Start/End: Complemental strand, 3677518 - 3677479
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgttttta 470  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  3677518 aagtaggtgtagcttgctaacttgcaccttagtgttttta 3677479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 12193914 - 12193780
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    |||| ||| ||||| |||| ||||| ||  ||||| | ||||||||||| | ||||||| || |||||||| | ||||| ||||||||||| || |||||    
T  12193914 gggtatggatatggattcgaggtgggtatctatatacccattacccgtcccatacccgtgttctgaaatcgggaaaaacacatactcatacccaaaccca 12193815  T
Q  112 gtc-aaatcggagaaaatccgtcaaatcggggttgg 146  Q
    ||| |||||||| |||| ||||||||| ||| ||||    
T  12193814 gtcaaaatcgga-aaaacccgtcaaattgggtttgg 12193780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 35510540 - 35510425
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||  || |||| |||||  |||| ||||||||| |||||||||||||||||||| ||| | || ||||||||| | ||||||| || |||| ||    
T  35510540 cattcgggacggatttgagtatgaattcgaggtggatacctatatcctcattacccgtcttgtatctgtgttttgaaattggggaaaacccaaactctta 35510441  T
Q  102 ctcagacccagtcaaa 117  Q
    | || ||| |||||||    
T  35510440 cccaaacctagtcaaa 35510425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 39256430 - 39256379
Alignment:
Q  129 ccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    ||||||||| |||||||||||||||| ||||||| | |||||||||||||||    
T  39256430 ccgtcaaattggggttggtttgggcgggtacccatgggcacgggttttgttg 39256379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 313
Target Start/End: Original strand, 11751084 - 11751122
Alignment:
Q  275 aacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  11751084 aacgaattcgttgacacctggtgtcaacggatcctaact 11751122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 28452069 - 28452123
Alignment:
Q  341 atataggggctgctaatttacac-caccccaaaatagtaaggtgcaagttagcaa 394  Q
    |||||||||||||||| |||||| |||||||||  ||||||||||||||||||||    
T  28452069 atataggggctgctaacttacactcaccccaaagcagtaaggtgcaagttagcaa 28452123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 42576604 - 42576662
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtc 60  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||   |||||||||||    
T  42576604 cattcgggtagggtttgtgtatgggttcagggtgggtacatatatatccattacccgtc 42576662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 17845478 - 17845397
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactca 93  Q
    |||||||||||||||||  |||||| ||| |||||   ||||||| ||||| ||| ||| |||||||||||| |||||||||    
T  17845478 gggtttgggtatgggttaagggtgggtacttatatgtccattaccggtctcatactcgtgttttgaaatcgaagaaaactca 17845397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 18485738 - 18485787
Alignment:
Q  131 gtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgttg 180  Q
    |||||||||||||||||||||||| ||||||| | |||||| ||||||||    
T  18485738 gtcaaatcggggttggtttgggcgggtacccatgggcacggattttgttg 18485787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 10862796 - 10862756
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  10862796 aagtgggtgtagcttgctaatttacaccttagtgtttttag 10862756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 12341662 - 12341738
Alignment:
Q  72 ttttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtt 148  Q
    ||||||||||| ||||||| ||||| ||||| || || |||||||| ||| ||||| ||||||||| ||| ||||||    
T  12341662 ttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggtt 12341738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 18106154 - 18106082
Alignment:
Q  64 tacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaa 136  Q
    ||||||| |||||| |||| ||||||| ||||| ||||  || ||||||||||| ||| ||||||||||||||    
T  18106154 tacccgtgttttgagatcggggaaaacccatacccatatccaaacccagtcaaaacggggaaaatccgtcaaa 18106082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 22301884 - 22301920
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    |||||||||||||||||||| ||||||||||||||||    
T  22301884 caacgaattcgttgacacctggtgtcaacggatccta 22301920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 27177950 - 27177914
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    |||||||||||||||||||| ||||||||||||||||    
T  27177950 caacgaattcgttgacacctggtgtcaacggatccta 27177914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 309
Target Start/End: Complemental strand, 9540369 - 9540334
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcct 309  Q
    |||||||||||||||||||| |||||||||||||||    
T  9540369 caacgaattcgttgacacctggtgtcaacggatcct 9540334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 18174137 - 18174098
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  18174137 caacgaattcgttaacacctggtgtcaacggatcctaact 18174098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 18174684 - 18174723
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  18174684 caacgaattcgttgacacctgatgtcaacggatcctaact 18174723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 29559434 - 29559473
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcctaact 313  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  29559434 caacgaattcgttgacacctggtgtcaacagatcctaact 29559473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 42798074 - 42798011
Alignment:
Q  13 ggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttg 76  Q
    |||||| ||||||||||||||||| ||| ||||| | | ||||||||||| ||||||| |||||    
T  42798074 ggtttgtgtatgggttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttg 42798011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 395
Target Start/End: Complemental strand, 3670954 - 3670904
Alignment:
Q  346 ggggctgctaatttacacc-accccaaaatagtaaggtgcaagttagcaag 395  Q
    ||||||||||||||||||| |||  |||||| |||||||||||||||||||    
T  3670954 ggggctgctaatttacacccacctaaaaatattaaggtgcaagttagcaag 3670904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 308
Target Start/End: Original strand, 26752737 - 26752771
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatcc 308  Q
    |||||||||||||||||||| ||||||||||||||    
T  26752737 caacgaattcgttgacacctggtgtcaacggatcc 26752771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 13531951 - 13532075
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||| || ||||||||||||| |||||||||||||| |||||  ||  ||| || | ||||| ||||  |||||| ||| |||||||| || | |||    
T  13531951 gggtttgagtgtgggttcggggtgaatacatatatcctcgttacctatccagtatccatgttttg-aatcatggaaaattcaaactcatacccaaatcca 13532049  T
Q  112 gtcaaatcggagaaaatccgtcaaat 137  Q
     | ||| | |||||||||||||||||    
T  13532050 ataaaagcagagaaaatccgtcaaat 13532075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 398
Target Start/End: Complemental strand, 32275886 - 32275833
Alignment:
Q  346 ggggctgctaatttacacc-accccaaaatagtaaggtgcaagttagcaagcta 398  Q
    ||||||||||| ||||||| ||||||||| |  |||||||||||||||||||||    
T  32275886 ggggctgctaacttacacccaccccaaaacacgaaggtgcaagttagcaagcta 32275833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 10863042 - 10863082
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||||| ||||||||||||||||| ||||||||||    
T  10863042 aagtgggtgtaggttgctaacttacaccttggtgtttttag 10863082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 70086 - 70264
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaact-catactcat 100  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||| ||||||| ||||||| | || ||||||    
T  70086 catttgggtagggtttgggtatgggtttggggtgggtacatatatcctcgttacccgtcccgtacccgtattatgaaatc-aggaaaaatccaaactcat 70184  T
Q  101 actcagacccagtcaaatcgg-agaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgtt 179  Q
    ||||| ||| | | ||||||| | |||||||||||||||| |||||||||||||  ||||| | | |||||| |||||||    
T  70185 actcaaaccaaattaaatcggaaaaaaatccgtcaaatcgaggttggtttgggcaggtacctatgggcacggattttgtt 70264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 2960 - 3081
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||   ||| |||||  |||||||||||||||||||| ||||||| || |||||||    
T  2960 cattcgggtagggtttgagtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactcata 3059  T
Q  102 ctcagacccagtcaaatcggag 123  Q
    | || |||||||||||||||||    
T  3060 cccaaacccagtcaaatcggag 3081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 128218 - 128068
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| |||||| |   ||||| || |||||||    
T  128218 catttgggtagggtttgggtatgggttcggggtgggtacatatatccccattacccgtcccgtacccgtattatgaaattggaaaaaacccaaactcata 128119  T
Q  102 ctcagacccagtcaaa-tcggagaaaatccgtcaaatcggggttggtttgg 151  Q
    |||| ||||| ||||| ||| | |||| ||  ||||||| |||||||||||    
T  128118 ctcaaacccaatcaaattcgaaaaaaacccaccaaatcgaggttggtttgg 128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 105566 - 105389
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||   ||||||||| ||||||||||||  |||||||   ||||  ||  | ||||    
T  105566 catttgggtagggtttgggtatgggttcggggtgggtacatatatccctgttacccgtcccgtacccgtattaagaaatcggaaaaaatccaatcccata 105467  T
Q  102 ctcagacccagtcaaatcggagaaaatccgtcaaatcggggttggtttgggcgagtacccacgtgcacgggttttgtt 179  Q
    |||| ||||| |||||||| | |||| || ||||||||  ||||||||  ||  ||||||| | |||||| |||||||    
T  105466 ctcaaacccaatcaaatcgaaaaaaacccatcaaatcgaagttggtttaagcaggtacccatgagcacggattttgtt 105389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 211355 - 211476
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcata 101  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||  |||||| || || ||||    
T  211355 cattcaggtagagtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccata 211454  T
Q  102 ctcagacccagtcaaatcggag 123  Q
    | || || ||||||||||||||    
T  211455 cccaaactcagtcaaatcggag 211476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 33396 - 33493
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagaccca 111  Q
    ||||||||||||||||||||||| ||||||||| | | ||||||||| | ||||||| ||||||||||| ||||||| || || ||||| || |||||    
T  33396 gtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatacccaaaccca 33493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 55994 - 55907
Alignment:
Q  2 cattcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||   |||||| ||  |||||| ||||||||||| | |||||||    
T  55994 cattcgggtagggtttgggtatggattcggggtgggtacatatatccctgttaccc-tcctgtacccatattttgaaattggggaaaac 55907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 16959 - 17038
Alignment:
Q  3 attcgggtagggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||||||| ||||||| |||| ||||||||||| ||||||||||| | | ||||||| | ||| |||||||||||||||    
T  16959 attcgggtatggtttggatatgagttcggggtgggtacatatatccccgtcacccgtcccatacacgtattttgaaatcg 17038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 20826 - 20756
Alignment:
Q  12 gggtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcg 82  Q
    ||||||| ||||||||||| ||||||||  ||||||| ||||||||||||| ||| ||  |||||||||||    
T  20826 gggtttgagtatgggttcgaggtggatatttatatccccattacccgtctcatactcgagttttgaaatcg 20756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 4261 - 4337
Alignment:
Q  14 gtttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaac 90  Q
    ||||||||||||||| |  |||| |||| |||| ||| ||||| ||||| ||||||| ||||||||||||| |||||    
T  4261 gtttgggtatgggtttgaagtgggtacaaatatactcgttaccagtctcatacccgtgttttgaaatcgagaaaaac 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 14232 - 14101
Alignment:
Q  50 cattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaatcggagaaaatccgtcaaatcggggttggttt 149  Q
    ||||||||||  | ||||||| |||| |||||| |||||||||| |||||||| || |||||  |||| |||  |||| ||||||||| ||| |||||||    
T  14232 cattacccgttccatacccgtgtttt-aaatcggggaaaactcaaactcatacccaaacccaaacaaaacgggaaaaacccgtcaaattgggtttggttt 14134  T
Q  150 gggcgagtacccacgtgcacgggttttgttgtc 182  Q
    ||| | ||| ||||| | | | |||||||||||    
T  14133 gggtgggtaaccacgagtatgagttttgttgtc 14101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 90601 - 90717
Alignment:
Q  15 tttgggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtc 114  Q
    |||| |||||||||||||| || |||  |||| | | ||| ||||||| ||||||| ||||||||||| |||||      || ||||| || ||||||||    
T  90601 tttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacccgtgttttgaaatcggggaaa------acccatacccaaacccagtc 90694  T
Q  115 aaatcggagaaaatccgtcaaat 137  Q
    ||| ||| |||||||||||||||    
T  90695 aaaacggggaaaatccgtcaaat 90717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 148412 - 148376
Alignment:
Q  274 caacgaattcgttgacacctagtgtcaacggatccta 310  Q
    ||||||||||||||||| || ||||||||||||||||    
T  148412 caacgaattcgttgacatctggtgtcaacggatccta 148376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1532 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1532
Description:

Target: scaffold1532; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 1356 - 1316
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    ||||||||| ||||||||||| | |||||||||||||||||    
T  1356 aagtaggtgcagcttgctaacctgcaccttagtgtttttag 1316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 4661 - 4554
Alignment:
Q  19 ggtatgggttcggggtggatacatatatcctcattacccgtctcgtacccgtattttgaaatcgaggaaaactcatactcatactcagacccagtcaaat 118  Q
    |||||||||||| ||||| ||  |||||||   ||||| ||| | ||||||||||||||||| | ||||||| || ||||||||||| || |||| |||     
T  4661 ggtatgggttcgtggtgggtagctatatccctgttacctgtcccatacccgtattttgaaattggggaaaac-caaactcatactcaaactcagttaaaa 4563  T
Q  119 cggagaaaa 127  Q
    |||| ||||    
T  4562 cggataaaa 4554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 14900 - 14972
Alignment:
Q  64 tacccgtattttgaaatcgaggaaaactcatactcatactc-agacccagtcaaatcggagaaaatccgtcaa 135  Q
    ||||||| ||||||||||| ||||||| || |||||||| | | ||||| ||||| ||||||||| |||||||    
T  14900 tacccgtgttttgaaatcggggaaaacccaaactcataccctaaacccaatcaaagcggagaaaacccgtcaa 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 7315 - 7355
Alignment:
Q  431 aagtaggtgtagcttgctaacttacaccttagtgtttttag 471  Q
    |||| ||||| ||||||||||||| ||||||||||||||||    
T  7315 aagtgggtgtggcttgctaacttataccttagtgtttttag 7355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University