View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1342_high_19 (Length: 452)

Name: NF1342_high_19
Description: NF1342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1342_high_19
NF1342_high_19
[»] chr7 (34 HSPs)
chr7 (8-443)||(20952079-20952514)
chr7 (37-292)||(21008608-21008858)
chr7 (299-365)||(21854550-21854616)
chr7 (297-405)||(15137553-15137660)
chr7 (297-389)||(25590611-25590703)
chr7 (296-389)||(5273574-5273667)
chr7 (297-378)||(45709703-45709784)
chr7 (333-405)||(9183160-9183231)
chr7 (297-377)||(26459406-26459486)
chr7 (297-356)||(3280502-3280561)
chr7 (297-367)||(5579240-5579310)
chr7 (297-363)||(25021345-25021411)
chr7 (297-375)||(48771938-48772016)
chr7 (297-378)||(2446308-2446389)
chr7 (300-405)||(43663064-43663168)
chr7 (297-389)||(26526290-26526381)
chr7 (318-377)||(2962480-2962539)
chr7 (318-389)||(9608613-9608684)
chr7 (318-389)||(9836185-9836256)
chr7 (297-372)||(22760863-22760938)
chr7 (292-351)||(23945856-23945915)
chr7 (301-356)||(27445000-27445055)
chr7 (296-367)||(27776171-27776242)
chr7 (297-392)||(31835192-31835287)
chr7 (297-372)||(43590907-43590982)
chr7 (321-405)||(5830572-5830655)
chr7 (297-353)||(11720980-11721036)
chr7 (297-377)||(17041008-17041088)
chr7 (297-377)||(18363696-18363776)
chr7 (297-377)||(30579335-30579415)
chr7 (297-353)||(37233592-37233648)
chr7 (297-389)||(38374583-38374675)
chr7 (297-377)||(39631844-39631924)
chr7 (297-377)||(43215184-43215264)
[»] chr1 (30 HSPs)
chr1 (297-405)||(51814494-51814601)
chr1 (318-412)||(52336736-52336829)
chr1 (297-389)||(16893394-16893486)
chr1 (297-372)||(19528328-19528403)
chr1 (297-356)||(41508831-41508890)
chr1 (297-367)||(9165201-9165271)
chr1 (300-391)||(9964441-9964532)
chr1 (299-377)||(33700769-33700847)
chr1 (297-363)||(45235389-45235455)
chr1 (297-367)||(46146273-46146343)
chr1 (297-389)||(952511-952603)
chr1 (331-405)||(17439951-17440025)
chr1 (350-412)||(48619171-48619232)
chr1 (297-367)||(52116787-52116857)
chr1 (296-389)||(2219971-2220064)
chr1 (300-337)||(2379428-2379465)
chr1 (297-405)||(15064962-15065072)
chr1 (320-389)||(15786304-15786373)
chr1 (295-356)||(31794281-31794342)
chr1 (297-354)||(40257399-40257456)
chr1 (297-405)||(6122794-6122901)
chr1 (297-389)||(6650595-6650687)
chr1 (297-377)||(8177178-8177258)
chr1 (318-390)||(9643792-9643864)
chr1 (304-372)||(17410238-17410306)
chr1 (301-389)||(17745240-17745328)
chr1 (318-354)||(35562746-35562782)
chr1 (297-377)||(36371470-36371550)
chr1 (297-405)||(44961765-44961872)
chr1 (297-377)||(51703779-51703859)
[»] chr4 (27 HSPs)
chr4 (297-427)||(51250469-51250598)
chr4 (300-372)||(41346964-41347036)
chr4 (297-364)||(1730498-1730565)
chr4 (297-377)||(37109347-37109427)
chr4 (297-377)||(46545711-46545791)
chr4 (304-412)||(49576856-49576963)
chr4 (319-413)||(53496899-53496992)
chr4 (297-389)||(39509070-39509162)
chr4 (297-356)||(8714680-8714738)
chr4 (297-340)||(11591388-11591431)
chr4 (315-378)||(42644905-42644968)
chr4 (297-372)||(47044717-47044792)
chr4 (297-351)||(37443702-37443756)
chr4 (318-372)||(38869789-38869843)
chr4 (300-377)||(7292794-7292871)
chr4 (297-350)||(9241048-9241101)
chr4 (297-354)||(12798684-12798741)
chr4 (297-354)||(19238596-19238653)
chr4 (300-357)||(41683752-41683809)
chr4 (344-405)||(51954161-51954221)
chr4 (297-389)||(7949438-7949530)
chr4 (297-389)||(20216111-20216203)
chr4 (297-353)||(28635696-28635752)
chr4 (297-405)||(31826609-31826716)
chr4 (305-377)||(34075516-34075588)
chr4 (297-413)||(51948480-51948595)
chr4 (297-405)||(55427169-55427276)
[»] chr5 (17 HSPs)
chr5 (297-405)||(29692355-29692462)
chr5 (297-378)||(8278270-8278351)
chr5 (300-389)||(21086717-21086806)
chr5 (297-361)||(41797824-41797888)
chr5 (293-354)||(5596172-5596233)
chr5 (301-353)||(12883844-12883896)
chr5 (297-389)||(17028248-17028340)
chr5 (297-377)||(21549133-21549213)
chr5 (297-389)||(25627057-25627149)
chr5 (297-377)||(29075781-29075861)
chr5 (318-377)||(43442217-43442276)
chr5 (294-372)||(21589285-21589363)
chr5 (297-351)||(26598524-26598578)
chr5 (297-389)||(87408-87499)
chr5 (318-350)||(8642200-8642232)
chr5 (296-356)||(16457809-16457869)
chr5 (297-389)||(30883182-30883274)
[»] chr3 (29 HSPs)
chr3 (297-377)||(15048057-15048137)
chr3 (297-389)||(51903862-51903954)
chr3 (296-389)||(4222140-4222233)
chr3 (297-389)||(31520589-31520681)
chr3 (297-367)||(9557320-9557390)
chr3 (295-405)||(27923012-27923121)
chr3 (297-405)||(10499078-10499185)
chr3 (297-389)||(14186648-14186739)
chr3 (297-389)||(30232330-30232422)
chr3 (300-363)||(28928889-28928952)
chr3 (300-413)||(17034991-17035101)
chr3 (297-353)||(5499427-5499483)
chr3 (294-354)||(21960548-21960608)
chr3 (297-389)||(36720381-36720473)
chr3 (297-389)||(40063619-40063711)
chr3 (297-377)||(46518628-46518708)
chr3 (297-372)||(14339610-14339685)
chr3 (297-372)||(30311306-30311381)
chr3 (318-389)||(32651422-32651493)
chr3 (301-388)||(45308887-45308974)
chr3 (296-378)||(26481926-26482008)
chr3 (328-389)||(11642193-11642254)
chr3 (328-389)||(25035736-25035797)
chr3 (297-354)||(31788989-31789046)
chr3 (296-377)||(37051290-37051371)
chr3 (328-389)||(44743839-44743900)
chr3 (297-377)||(16354888-16354968)
chr3 (297-377)||(27093357-27093437)
chr3 (300-359)||(31295458-31295517)
[»] chr2 (23 HSPs)
chr2 (297-405)||(37480075-37480182)
chr2 (295-405)||(42327364-42327473)
chr2 (297-389)||(4060198-4060290)
chr2 (297-389)||(29503271-29503362)
chr2 (298-377)||(16918574-16918653)
chr2 (297-389)||(7799019-7799111)
chr2 (297-413)||(28846691-28846806)
chr2 (297-405)||(42602554-42602661)
chr2 (297-356)||(4438996-4439055)
chr2 (297-372)||(34041589-34041664)
chr2 (298-344)||(19099866-19099912)
chr2 (297-377)||(19322768-19322848)
chr2 (301-353)||(24191842-24191894)
chr2 (297-356)||(16381671-16381730)
chr2 (321-412)||(31573603-31573693)
chr2 (295-377)||(42922412-42922495)
chr2 (300-354)||(33962803-33962857)
chr2 (300-389)||(22363173-22363262)
chr2 (298-367)||(23465927-23465996)
chr2 (297-377)||(19244109-19244189)
chr2 (297-345)||(25931006-25931054)
chr2 (298-350)||(37755994-37756046)
chr2 (297-389)||(41908622-41908714)
[»] chr6 (13 HSPs)
chr6 (318-412)||(28363958-28364051)
chr6 (299-389)||(32613124-32613214)
chr6 (297-378)||(32201880-32201961)
chr6 (300-357)||(34293832-34293889)
chr6 (297-405)||(31622960-31623067)
chr6 (297-377)||(33549104-33549184)
chr6 (297-356)||(12188320-12188379)
chr6 (297-348)||(32415378-32415429)
chr6 (297-348)||(32421219-32421270)
chr6 (301-354)||(6776626-6776679)
chr6 (296-364)||(3925743-3925811)
chr6 (297-377)||(13227154-13227234)
chr6 (297-389)||(30127400-30127492)
[»] chr8 (30 HSPs)
chr8 (297-389)||(23361633-23361725)
chr8 (297-372)||(19703488-19703563)
chr8 (297-367)||(4830487-4830557)
chr8 (296-413)||(28898451-28898566)
chr8 (297-356)||(28566105-28566164)
chr8 (297-356)||(28573728-28573787)
chr8 (296-378)||(968361-968443)
chr8 (297-367)||(8059632-8059702)
chr8 (299-351)||(7286209-7286261)
chr8 (300-356)||(36205198-36205254)
chr8 (297-405)||(44780083-44780190)
chr8 (299-378)||(3624582-3624661)
chr8 (297-372)||(16852340-16852415)
chr8 (297-356)||(18897166-18897225)
chr8 (299-365)||(2203494-2203560)
chr8 (296-350)||(14254726-14254780)
chr8 (297-367)||(26688865-26688935)
chr8 (297-367)||(30483890-30483960)
chr8 (297-354)||(5264544-5264601)
chr8 (296-377)||(18540297-18540378)
chr8 (297-377)||(20994453-20994534)
chr8 (297-349)||(5801047-5801099)
chr8 (297-405)||(11819776-11819883)
chr8 (297-405)||(27750730-27750837)
chr8 (304-364)||(28636352-28636412)
chr8 (304-364)||(28644086-28644146)
chr8 (304-364)||(28653038-28653098)
chr8 (297-405)||(28783060-28783167)
chr8 (297-372)||(29376474-29376547)
chr8 (297-357)||(42188350-42188410)
[»] scaffold1367 (1 HSPs)
scaffold1367 (303-377)||(836-910)
[»] scaffold0291 (1 HSPs)
scaffold0291 (296-372)||(2471-2547)
[»] scaffold0258 (1 HSPs)
scaffold0258 (297-377)||(15319-15399)
[»] scaffold0194 (1 HSPs)
scaffold0194 (301-389)||(13030-13118)
[»] scaffold0118 (1 HSPs)
scaffold0118 (297-405)||(41602-41709)
[»] scaffold0299 (1 HSPs)
scaffold0299 (303-377)||(11534-11608)
[»] scaffold0021 (1 HSPs)
scaffold0021 (304-354)||(157006-157056)
[»] scaffold0002 (1 HSPs)
scaffold0002 (300-377)||(94967-95044)
[»] scaffold0417 (1 HSPs)
scaffold0417 (297-337)||(10219-10259)


Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 8 - 443
Target Start/End: Complemental strand, 20952514 - 20952079
Alignment:
Q  8 gatcaagatgagtcga--ctcgttaaagcttgtattttaagaattaaaaaataataactaaactgttttctctggttcgtccgatcaagattggacggtc 105  Q
    |||||||||||||||   ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20952514 gatcaagatgagtcggttctcattaaagcttgtattttaagaattaaagaataataactaaactgttttctctggttcatccgatcaagattggacggtc 20952415  T
Q  106 attaatgctctgactgcgtgaatgtaggaaaatagtaagtgaattggatttccaaggtaacttgtatacaacactaactgtctcctaataaaatgctgca 205  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||||||||    
T  20952414 attaatgct-tgactgcgtgaatgtagaaaaatagtaagtgaattgaatttccaaggtaacttgtatacaacacta-ctatctctgaataaaatgctgca 20952317  T
Q  206 agattgagttcaactagtatatataaaatcagaataattttagtagcttagatttggatatggatggtctcataacattaacatatataggaacccactt 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||    
T  20952316 agattgagttcaactagtatatataaaatcagaataattttagtagcttagatttggacatcgatggtctcataacattaacatatataggaatccactt 20952217  T
Q  306 gggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggactaattta 405  Q
    |||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||||||    
T  20952216 gggttgacctgatggtattggtttgggacctgggagtgtgctcctcctcaaaatctcagattcgattatctcccgtgtcaattttggatggattaattta 20952117  T
Q  406 aattcttactaaaagacatatataggtacaagaattat 443  Q
      ||||||  |||||| |||||||||||||||| ||||    
T  20952116 gcttcttataaaaagatatatataggtacaagatttat 20952079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 37 - 292
Target Start/End: Complemental strand, 21008858 - 21008608
Alignment:
Q  37 gtattttaagaattaaaaaataataactaaactgttttctctggttcgtccgatcaagattggacggtcattaatgctctgactgcgtgaatgtaggaaa 136  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||| || |||||| || |||| ||||||||||| |||||| | |||||| ||||||    
T  21008858 gtattttaggaattaaaaaataataactaaactgttttttctggttcttctgatcaatatcggacagtcattaatgccctgactacttgaatgcaggaaa 21008759  T
Q  137 atagtaagtgaattggatttccaaggtaacttgtatacaacactaactgtctcctaataaaatgctgcaagattgagttcaactagtatatataaaatca 236  Q
    |||||||||||||  |||||||||||||||||||||||||||||  |||||||||     |||||| |||||| |||||||   |||||||||| |||||    
T  21008758 atagtaagtgaatctgatttccaaggtaacttgtatacaacacttgctgtctcct-----aatgctacaagatcgagttcagaaagtatatatataatca 21008664  T
Q  237 gaataattttagtagcttagatttggatatggatggtctcataacattaacatata 292  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||| ||||||||    
T  21008663 gaataattttagtagcttagatttggacatcgatggtctcgtaacataaacatata 21008608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 21854550 - 21854616
Alignment:
Q  299 cccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcagg 365  Q
    ||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||| |||||||    
T  21854550 cccacttgggttggcctgatggtattggctagggatctgggagtgtgctcctcctcaaagtctcagg 21854616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 15137553 - 15137660
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||||||||| |||| ||||| ||  ||||||| |  || |||||||||||||||  |||||||||||||| ||||  ||||||| |||||||||    
T  15137553 aacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaa-tttgggtgg 15137651  T
Q  397 actaattta 405  Q
     ||||||||    
T  15137652 gctaattta 15137660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 25590611 - 25590703
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||||||||||||| ||||||||| ||| |||||| || ||||||||||||| |  |||| |||| |||| ||| | ||||||||||    
T  25590611 aacccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaattt 25590703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 5273667 - 5273574
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||||||||| |||| |||| |||| |||||| || ||| |||||||||||||||  ||| ||||| |||| ||||| ||| ||||||    
T  5273667 gaacccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggtttgattgtctccggtgccaattt 5273574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 378
Target Start/End: Complemental strand, 45709784 - 45709703
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcc 378  Q
    |||||| |||||||| |||  ||||||| | ||||||||||||| ||||||||||||| |  ||||||||| ||||||||||    
T  45709784 aacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctcc 45709703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 405
Target Start/End: Complemental strand, 9183231 - 9183160
Alignment:
Q  333 atctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggactaattta 405  Q
    ||||| || |||||||||||||||| ||||||||| |||||||||  ||||||| ||||||||| ||||||||    
T  9183231 atctgggagtgtgctcctcctcaaagtctcaggttcgattatctctggtgtcaa-tttgggtgggctaattta 9183160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 26459486 - 26459406
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| |||  ||||||||| |||||| ||| || |||||||||||||||  ||||||||| |||| ||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 26459406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 356
Target Start/End: Complemental strand, 3280561 - 3280502
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    ||||||||||||||||| || ||||||||| |||||| | |||| |||||||||||||||    
T  3280561 aacccacttgggttgacatggtggtattggcttgggacccgagagtgtgctcctcctcaa 3280502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 5579310 - 5579240
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggtt 367  Q
    |||||||||||||||||||| |||| |||| |||||| ||  || |||||||||||||||  |||||||||    
T  5579310 aacccacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtt 5579240  T

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Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 363
Target Start/End: Complemental strand, 25021411 - 25021345
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctca 363  Q
    ||||||||||||||| |||  ||||||||| |||||| ||| || |||||||||||||||| |||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 375
Target Start/End: Original strand, 48771938 - 48772016
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatc 375  Q
    ||||||||||||||| | || ||||||||| |||||||||| || ||||||||||||  |  ||||||||| |||||||    
T  48771938 aacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgattatc 48772016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 297 - 378
Target Start/End: Original strand, 2446308 - 2446389
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcc 378  Q
    |||||||||||||||  ||||||||||||| ||||||  || || ||||||||||||| | |||||| ||| |||| |||||    
T  2446308 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctcc 2446389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 405
Target Start/End: Complemental strand, 43663168 - 43663064
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggact 399  Q
    |||||||||||| |||||||||||||  |||||| ||  ||  ||| |||||||| | |||||||||| || | ||||| || |||| ||||||||||||    
T  43663168 ccacttgggttggcctgatggtattgacttgggacctaggagcgtggtcctcctcgagatctcaggttcgaatctctccggtatcaa-tttgggtggact 43663070  T
Q  400 aattta 405  Q
    ||||||    
T  43663069 aattta 43663064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 26526290 - 26526381
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||| |||| |||  ||| ||||||||  || |||| ||||| ||||||||||||||||||||| |||| |||| ||||| ||||||||||    
T  26526290 aacccatttggattggtctggtggtattgacttaggatttgagagtgtgctcctcctcaaaatctcgggtt-gattctctccggtgtcaattt 26526381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 377
Target Start/End: Original strand, 2962480 - 2962539
Alignment:
Q  318 tggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||||||||||| | ||| || ||||||||||||||| |||||||||| |||| ||||    
T  2962480 tggtattggtttggaacctgtgagtgtgctcctcctcaagatctcaggttcgattctctc 2962539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 9608684 - 9608613
Alignment:
Q  318 tggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||| || |||||||||| || ||| ||||||||||| |||||||||| |||| ||||  ||||||||||    
T  9608684 tggtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctctagtgtcaattt 9608613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 9836256 - 9836185
Alignment:
Q  318 tggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||| || |||||||||| || ||| ||||||||||| |||||||||| |||| ||||  ||||||||||    
T  9836256 tggtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctctagtgtcaattt 9836185  T

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Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 22760863 - 22760938
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    |||||||||||||||  ||| ||||||||  |||||| ||| || |||||||||||||||  ||||||||| ||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 22760938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 351
Target Start/End: Original strand, 23945856 - 23945915
Alignment:
Q  292 ataggaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctc 351  Q
    |||| ||||||||||||||||||| |||||||||  || | | |||||||||||||||||    
T  23945856 atagaaacccacttgggttgacctaatggtattgacttagaacctgagaatgtgctcctc 23945915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 356
Target Start/End: Original strand, 27445000 - 27445055
Alignment:
Q  301 cacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    ||||||||||||| |||||||||||  |||||| | |||| |||||||||||||||    
T  27445000 cacttgggttgacatgatggtattgacttgggaccagagagtgtgctcctcctcaa 27445055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 367
Target Start/End: Original strand, 27776171 - 27776242
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggtt 367  Q
    |||||||||||||||| |||| ||||||  | ||||||  ||||| ||||||||||||| || |||||||||    
T  27776171 gaacccacttgggttggcctggtggtatacgcttgggacttgagagtgtgctcctcctcgaagtctcaggtt 27776242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 31835192 - 31835287
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgg 392  Q
    ||||||||||||||| |||| |||| |||| |||||  ||  || |||||||||||||||  ||||||||| ||||||| |  ||| |||||||||    
T  31835192 aacccacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcctcctcaaggtctcaggttcgattatccctggtgccaattttgg 31835287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 43590907 - 43590982
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    |||||| |||||||| |||| ||||||||| ||||||  || || |||||||||||||||  ||||||||| ||||    
T  43590907 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgatt 43590982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 5830655 - 5830572
Alignment:
Q  321 tattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggactaattta 405  Q
    ||||||||||| | ||| || ||| ||||||||||| || ||| ||| |||||||||  ||||||| ||| ||||||||||||||    
T  5830655 tattggtttggaacctgggagtgtactcctcctcaagatttcaagttcgattatctctagtgtcaa-tttaggtggactaattta 5830572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 11721036 - 11720980
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcct 353  Q
    |||| |||| ||||| |||| ||||||||| |||||| ||| |||||||||||||||    
T  11721036 aaccaacttcggttggcctggtggtattggcttgggacctgggaatgtgctcctcct 11720980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 17041088 - 17041008
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||||||||||||  ||  ||| ||||| ||||||||||  | |||||||||||||||  ||||||||| |||| ||||    
T  17041088 aacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctc 17041008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 18363696 - 18363776
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| |||  |||||| || ||| ||| || || |||||||||||||||  ||||||||| |||| ||||    
T  18363696 aacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctc 18363776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 30579335 - 30579415
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| |||| ||||||||| ||| || ||| || ||| | |||||||||  ||||||||| |||| ||||    
T  30579335 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctc 30579415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 37233648 - 37233592
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcct 353  Q
    ||||||||||||||||| || || |||||| ||||||| || || ||||||||||||    
T  37233648 aacccacttgggttgacttggtgatattggcttgggatgtgggagtgtgctcctcct 37233592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 38374675 - 38374583
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||||| | || |||| |||| |||||| || ||| |||||||||||||||  ||| ||||| |||| || || ||| ||||||    
T  38374675 aacccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctccccggtgccaattt 38374583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 39631844 - 39631924
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| |||  ||||||||| |||||| ||| || |  ||||||||||||  ||||||||| |||| ||||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctc 39631924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 43215184 - 43215264
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||||||||||||  ||  ||||||||| |||||| ||  || |||||||||||||||  ||||||||| |||| ||||    
T  43215184 aacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctc 43215264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 51814494 - 51814601
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||||||||| |||||||||||||  ||| ||||||||| |||||||||||||||  ||||||||| |||| ||||| ||| ||| |||||||||    
T  51814494 aacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaa-tttgggtgg 51814592  T
Q  397 actaattta 405  Q
     ||||||||    
T  51814593 gctaattta 51814601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 412
Target Start/End: Complemental strand, 52336829 - 52336736
Alignment:
Q  318 tggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggactaatttaaattctt 412  Q
    ||||||||| |||||||||| || |||||||||||| || |||||||||| |||||||||  ||||||| ||||| ||| ||||||||| |||||    
T  52336829 tggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctggtgtcaa-tttggatgggctaatttaatttctt 52336736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 16893394 - 16893486
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||||||||||||| ||||||||| ||| ||| || || ||| ||||||||| |  ||||||||| |||| ||||| ||||||||||    
T  16893394 aacccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaattt 16893486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 19528403 - 19528328
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    ||||||||||||||| |||| ||||||||| |||||||||  || |||||||||||||||  ||||||||| ||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgatt 19528328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 356
Target Start/End: Original strand, 41508831 - 41508890
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    ||||||||||||||| |||| ||||| |||||||||||||| || |||||||||||||||    
T  41508831 aacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaa 41508890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 9165271 - 9165201
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggtt 367  Q
    ||||||||||||||| |||  ||||||||| |||||| ||| || |||||||||||||||| |||||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggtt 9165201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 391
Target Start/End: Original strand, 9964441 - 9964532
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttg 391  Q
    |||||||||||  ||||||| |||||  |||||||||| || ||||||| |||||||  ||||||||| |||||||||| |||  |||||||    
T  9964441 ccacttgggttagcctgatgttattgacttgggatctgggagtgtgctcttcctcaatgtctcaggtttgattatctccagtgctaattttg 9964532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 377
Target Start/End: Complemental strand, 33700847 - 33700769
Alignment:
Q  299 cccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||| |||  ||||||||| |||| ||||| || |||||||||||||||  ||||||||| |||| ||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 33700769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 363
Target Start/End: Complemental strand, 45235455 - 45235389
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctca 363  Q
    |||||||||||||||  ||||||||||||||||||||  || || ||||||||||||| | ||||||    
T  45235455 aacccacttgggttggtctgatggtattggtttgggacttgggagtgtgctcctcctcgagatctca 45235389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 46146343 - 46146273
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggtt 367  Q
    |||||||||||||||  | ||||||||| | |||||||||| ||||||||||| | ||||| |||||||||    
T  46146343 aacccacttgggttggtccgatggtattagcttgggatctgggaatgtgctccccttcaaagtctcaggtt 46146273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 952511 - 952603
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||| ||||  ||| |||| |||| |||||| ||| || ||||||| |||||||| |||||||||||||| || ||  |||||||||    
T  952511 aacccacttgagttggtctggtggtgttggcttgggacctgggagtgtgctcatcctcaaagtctcaggttagattctccccgatgtcaattt 952603  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 405
Target Start/End: Original strand, 17439951 - 17440025
Alignment:
Q  331 ggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggactaattta 405  Q
    ||||||| || ||||||||||||| |  ||||| ||| |||| ||||| |||||||||| || ||||||||||||    
T  17439951 ggatctgggagtgtgctcctcctcgaggtctcatgtttgattctctccagtgtcaatttaggttggactaattta 17440025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 412
Target Start/End: Complemental strand, 48619232 - 48619171
Alignment:
Q  350 tcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggactaatttaaattctt 412  Q
    ||||||| ||||||||||  ||||||||| |||||||||| | |||||||||||||| |||||    
T  48619232 tcctcaagatctcaggttctattatctccggtgtcaattt-gagtggactaatttaacttctt 48619171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 52116857 - 52116787
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggtt 367  Q
    |||||| |||||||| |||| ||||||||| ||||||  || || |||||||||||||||  |||||||||    
T  52116857 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggtt 52116787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 2219971 - 2220064
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||||||  ||| ||||||||| |||| | |||| | |||||| |||||| |  ||||||||| |||| |||||  |||||||||    
T  2219971 gaacccacttgggttgttctggtggtattggcttggaacctgaaagtgtgcttctcctcgaggtctcaggttcgattctctccaatgtcaattt 2220064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 2379428 - 2379465
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctg 337  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  2379428 ccacttgggttgacctagtggtattggtttgggatctg 2379465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 15064962 - 15065072
Alignment:
Q  297 aacccacttgggttgacctgatggtattgg---tttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttggg 393  Q
    ||||||||||||||| ||||||| ||||||    || ||| |||||| ||||||| |||||||  |||||||||  ||| || || ||||||| ||||||    
T  15064962 aacccacttgggttggcctgatgatattggcttcttaggacctgagagtgtgctcatcctcaaggtctcaggttcaattttccccggtgtcaa-tttggg 15065060  T
Q  394 tggactaattta 405  Q
    ||| ||||||||    
T  15065061 tgggctaattta 15065072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 389
Target Start/End: Complemental strand, 15786373 - 15786304
Alignment:
Q  320 gtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||| |||||||||| || |||||||||||||||  ||||||||| |||| |||   ||||||||||    
T  15786373 gtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgtcaattt 15786304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 356
Target Start/End: Complemental strand, 31794342 - 31794281
Alignment:
Q  295 ggaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    ||||||||||||||||| |||  ||||||||| ||||||  || || |||||||||||||||    
T  31794342 ggaacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaa 31794281  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 40257399 - 40257456
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctc 354  Q
    ||||||||||||||| |||| ||||||||| ||| || ||| || |||||||||||||    
T  40257399 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctc 40257456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 6122794 - 6122901
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    |||||| |||||||| |||  |||||| || ||||||  || || |||||||||||||||  ||||||||| ||||  |||  ||||||| |||||||||    
T  6122794 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaa-tttgggtgg 6122892  T
Q  397 actaattta 405  Q
     ||||||||    
T  6122893 gctaattta 6122901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 6650595 - 6650687
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||| || ||||| |||  ||||||||| |||||||| | || | |||||||||||||  ||||||||| |||| ||||  ||||||||||    
T  6650595 aacccaattaggttggcctagtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaattt 6650687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 8177258 - 8177178
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||| ||| |||| |||  ||||||||| |||||||||| || |||||||||||||||  | ||||||| |||| ||||    
T  8177258 aacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 8177178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 390
Target Start/End: Complemental strand, 9643864 - 9643792
Alignment:
Q  318 tggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaatttt 390  Q
    ||||||||| |||||||||| || |||| || |||||||  |||||| ||  ||||||||| |||||||||||    
T  9643864 tggtattggcttgggatctgggagtgtgttcatcctcaaggtctcagattcaattatctccggtgtcaatttt 9643792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 372
Target Start/End: Original strand, 17410238 - 17410306
Alignment:
Q  304 ttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    |||||||| |||  |||||||||||||||||||| || |||| |||||||| | |||||| ||| ||||    
T  17410238 ttgggttggcctagtggtattggtttgggatctgggagtgtggtcctcctcgagatctcaagttcgatt 17410306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 17745328 - 17745240
Alignment:
Q  301 cacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||| |||  ||||||||| |||||| |||||  ||||||||||||| |  ||||| ||| |||| ||||  ||||||||||    
T  17745328 cacttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaattt 17745240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 354
Target Start/End: Original strand, 35562746 - 35562782
Alignment:
Q  318 tggtattggtttgggatctgagaatgtgctcctcctc 354  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  35562746 tggtattggcttgggacctgagaatgtgctcctcctc 35562782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 36371470 - 36371550
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| |||  ||||||||| |||| | ||| || |||||||||||||||  ||| ||||| |||| ||||    
T  36371470 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctc 36371550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 44961765 - 44961872
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    |||||||||||||||  | | ||||||| | ||| ||| | ||| ||||||||||||||   ||||||||| |||| ||||  ||||||| |||||||||    
T  44961765 aacccacttgggttggtcaggtggtattagcttgagatttaagagtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaa-tttgggtgg 44961863  T
Q  397 actaattta 405  Q
     ||||||||    
T  44961864 gctaattta 44961872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 51703779 - 51703859
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||| ||||||||  ||  ||||||||| |||| ||||| || |||||||||||||||| | ||||||| |||| ||||    
T  51703779 aacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctc 51703859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 427
Target Start/End: Complemental strand, 51250598 - 51250469
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||||||||| |||| ||||||||| |||||||||| || |||||||| |||||| |||||| ||| ||||  |||| ||| ||| |||||||||    
T  51250598 aacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaa-tttgggtgg 51250500  T
Q  397 actaatttaaattcttactaaaagacatata 427  Q
     ||||||||  ||||||  |||| |||||||    
T  51250499 gctaatttagcttcttaaaaaaaaacatata 51250469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 372
Target Start/End: Complemental strand, 41347036 - 41346964
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    |||||||||||| |||||||||||||||||| |||||| || | ||||||||||| || ||||||||| ||||    
T  41347036 ccacttgggttggcctgatggtattggtttgagatctgggagtatgctcctcctcgaagtctcaggttcgatt 41346964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 364
Target Start/End: Complemental strand, 1730565 - 1730498
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcag 364  Q
    |||||||||||||||||||  ||||||||| |||||| |||||| |||||||||| ||||| ||||||    
T  1730565 aacccacttgggttgacctagtggtattggcttgggacctgagagtgtgctcctcttcaaagtctcag 1730498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 37109427 - 37109347
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| |||  ||||||||| |||||| ||| || |||||||||||||||  ||||||||| |||| ||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 37109347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 46545711 - 46545791
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| |||  ||||||||| ||| || |||||| ||||||||||||||| ||||||| || |||| ||||    
T  46545711 aacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctc 46545791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 412
Target Start/End: Complemental strand, 49576963 - 49576856
Alignment:
Q  304 ttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggactaatt 403  Q
    |||||||| |||| ||||||||| || |||  || || |||||||||||||||  ||||||||| |||| |||||  |||||| |||||||||||||| |    
T  49576963 ttgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctccaatgtcaa-tttgggtggactaact 49576865  T
Q  404 taaattctt 412  Q
    ||| |||||    
T  49576864 taacttctt 49576856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 53496899 - 53496992
Alignment:
Q  319 ggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggactaatttaaattctta 413  Q
    ||||||||||||||| ||| || |||||||||||||||| |||||| || |||| ||||  | | ||| ||||| ||||||||||||| ||||||    
T  53496899 ggtattggtttgggacctgggagtgtgctcctcctcaaagtctcagatttgattctctctggagccaa-tttggttggactaatttaacttctta 53496992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 39509070 - 39509162
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||||||||  || |||||| ||| |||||||||| || ||||||||||||| |  ||||||||| |||| || || ||| ||||||    
T  39509070 aacccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaattt 39509162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 356
Target Start/End: Original strand, 8714680 - 8714738
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    |||||||||||||| ||||  |||||||||||||||||||||||  ||| ||||||||||    
T  8714680 aacccacttgggtt-acctagtggtattggtttgggatctgagagcgtgttcctcctcaa 8714738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 340
Target Start/End: Complemental strand, 11591431 - 11591388
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgaga 340  Q
    |||||||||||||||||||||||||||| | |||||| ||||||    
T  11591431 aacccacttgggttgacctgatggtatttgattgggacctgaga 11591388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 378
Target Start/End: Complemental strand, 42644968 - 42644905
Alignment:
Q  315 tgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcc 378  Q
    |||| ||||||  ||||||||||||| |||| || |||||||| ||||||||| ||||||||||    
T  42644968 tgatagtattgacttgggatctgagagtgtgttcttcctcaaagtctcaggttcgattatctcc 42644905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 47044717 - 47044792
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    ||||||||||| ||| |||| ||||||||  ||||||||||||| | ||||||||||| |  ||||||||| ||||    
T  47044717 aacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgatt 47044792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 37443702 - 37443756
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctc 351  Q
    |||||||||||||||||||  ||||||||| |||||||||| || ||| ||||||    
T  37443702 aacccacttgggttgacctagtggtattggcttgggatctgggagtgtactcctc 37443756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 38869789 - 38869843
Alignment:
Q  318 tggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    ||||||||| |||||||||| || |||||||||||||||  ||||||||| ||||    
T  38869789 tggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 38869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 377
Target Start/End: Complemental strand, 7292871 - 7292794
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||  ||  ||||||||| |||| | ||| || |||||||||||||||| ||||||||| |||| ||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctc 7292794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 9241101 - 9241048
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcct 350  Q
    ||||||||||||||| |||| ||||||||| ||||||||||  | |||||||||    
T  9241101 aacccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcct 9241048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 12798684 - 12798741
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctc 354  Q
    ||||||||||||||||||   ||||||||||||| |||||| || |||||| ||||||    
T  12798684 aacccacttgggttgaccgagtggtattggtttgagatctgggagtgtgctgctcctc 12798741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 19238653 - 19238596
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctc 354  Q
    ||||||||||||||| |||| ||||||||| ||||||  || || |||||||||||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctc 19238596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 41683752 - 41683809
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaa 357  Q
    ||||||||||||||||  ||||||||| |||| | |||||| ||||||||| ||||||    
T  41683752 ccacttgggttgacctagtggtattggcttggaacctgagagtgtgctccttctcaaa 41683809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 405
Target Start/End: Original strand, 51954161 - 51954221
Alignment:
Q  344 tgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggactaattta 405  Q
    ||||||||||| |  ||||||||| |||||||||| ||||||| ||||||||| ||||||||    
T  51954161 tgctcctcctcgaggtctcaggtttgattatctccggtgtcaa-tttgggtgggctaattta 51954221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 7949530 - 7949438
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||||| || |||   |||||||| |||||| ||  || |||||||||||||||  ||||||||| |||| ||||  ||||||||||    
T  7949530 aacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 7949438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 20216111 - 20216203
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||||||||| | |||| |||||||||| ||  ||||| |||| | ||||||||| ||||| ||| |||| | |||  |||||||||    
T  20216111 aacccacttgggttgatcagatgatattggtttgagacttgagagtgtgtttctcctcaaagtctcatgttcgattctttccaatgtcaattt 20216203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 28635696 - 28635752
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcct 353  Q
    ||||||||||||||| |||| ||||| ||  |||||||||| || ||||||||||||    
T  28635696 aacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcct 28635752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 31826609 - 31826716
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||||||||| |||  |||||| || ||||||| || || |||||||||||||||  ||||| ||| ||||  ||   ||||||| |||||||||    
T  31826609 aacccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattccctttagtgtcaa-tttgggtgg 31826707  T
Q  397 actaattta 405  Q
     ||||||||    
T  31826708 gctaattta 31826716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 377
Target Start/End: Original strand, 34075516 - 34075588
Alignment:
Q  305 tgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||||  ||| ||||||||||||| |||||  |||||| ||||| |||||  |||||||||||||| ||||    
T  34075516 tgggttggtctggtggtattggtttgagatctatgaatgtactccttctcaaggtctcaggttagattctctc 34075588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 413
Target Start/End: Original strand, 51948480 - 51948595
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||||||||| |||| | ||||||  |||||||||  || ||||| ||||||| |  |||||||||  ||| ||||| ||||||||||    |||    
T  51948480 aacccacttgggttgtcctggtagtattgacttgggatctaggagtgtgcccctcctcgaggtctcaggttcaattctctccagtgtcaatttaaa-tgg 51948578  T
Q  397 actaatttaaattctta 413  Q
    |||||||||| ||||||    
T  51948579 actaatttaacttctta 51948595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 55427276 - 55427169
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||||||||| |||| ||||||||| |||||| ||| || | ||||||| ||| |  ||||||||| |||| ||  | ||| ||| |||||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaa-tttgggtgg 55427178  T
Q  397 actaattta 405  Q
     ||||||||    
T  55427177 gctaattta 55427169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 29692462 - 29692355
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    |||||| ||||||||  ||| ||||||||| |||||||||| || |||||||||||||||| |||||||||  ||| |||||  || ||| |||||||||    
T  29692462 aacccatttgggttggtctggtggtattggattgggatctgggagtgtgctcctcctcaaagtctcaggtttaattctctccgatgccaa-tttgggtgg 29692364  T
Q  397 actaattta 405  Q
    |||||||||    
T  29692363 actaattta 29692355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 378
Target Start/End: Complemental strand, 8278351 - 8278270
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcc 378  Q
    |||||||||||||||  ||||||||||||| ||||||  || || ||||||||||||| | |||||| ||| ||||||||||    
T  8278351 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagtttgattatctcc 8278270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 21086717 - 21086806
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||| ||||  |||||||||||| ||| |||||||  | ||||||||||||||| ||||||| || |||||||||  ||||||||||    
T  21086717 ccacttgagttggtctgatggtattgatttaggatctggcagtgtgctcctcctcaagatctcagattcgattatctctggtgtcaattt 21086806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 361
Target Start/End: Complemental strand, 41797888 - 41797824
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatct 361  Q
    ||||||||| |||||  || || ||||||| ||| ||||||||||||||||||||||||||||||    
T  41797888 aacccactttggttggtctaattgtattggcttgagatctgagaatgtgctcctcctcaaaatct 41797824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 293 - 354
Target Start/End: Original strand, 5596172 - 5596233
Alignment:
Q  293 taggaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctc 354  Q
    |||||||| |||||||||||  || |||||||| |||||||||||||| || ||||||||||    
T  5596172 taggaaccaacttgggttgatatggtggtattgttttgggatctgagagtgcgctcctcctc 5596233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 12883844 - 12883896
Alignment:
Q  301 cacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcct 353  Q
    ||||||| |||||||||||||||| | |||||||||| || ||||||||||||    
T  12883844 cacttggattgacctgatggtattaggttgggatctgggagtgtgctcctcct 12883896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 17028340 - 17028248
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||||||||||||  | ||||||| ||||||  || || |||||||||||||||  ||||||||| ||||  |||  ||||||||||    
T  17028340 aacccacttgggttgacctagttgtattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaattt 17028248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 21549213 - 21549133
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| |||  ||||||||| |||||| ||| || |||||||||||| ||| ||||| ||| |||| ||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctc 21549133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 25627057 - 25627149
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||||| |||  ||||||||| |||| |  || || |||||||||||||||  ||||||||| |||| ||||  ||||||||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 25627149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 29075781 - 29075861
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||  |||  ||||||||| |||||||||| || ||||||||||||| | |||||| ||| |||| ||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctc 29075861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 377
Target Start/End: Original strand, 43442217 - 43442276
Alignment:
Q  318 tggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||| |||||| || |||||||||||||||  ||||||||| |||| ||||    
T  43442217 tggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 43442276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 21589285 - 21589363
Alignment:
Q  294 aggaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    |||||||||||||||||| |||| ||||||||| |||||| ||| || | |||| |||||| |  ||||||||| ||||    
T  21589285 aggaacccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgatt 21589363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 26598524 - 26598578
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctc 351  Q
    ||||||||||| ||| |||  ||||||||| ||||||||||||| ||||||||||    
T  26598524 aacccacttggattggcctagtggtattggcttgggatctgagagtgtgctcctc 26598578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 87499 - 87408
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||| ||||| |||  ||||||||  |||| ||||| || |||||||||||||||  ||||||||| ||||  |||| ||||||||||    
T  87499 aacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgatt-cctccagtgtcaattt 87408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 350
Target Start/End: Complemental strand, 8642232 - 8642200
Alignment:
Q  318 tggtattggtttgggatctgagaatgtgctcct 350  Q
    ||||||||| |||||||||||||||||||||||    
T  8642232 tggtattggcttgggatctgagaatgtgctcct 8642200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 16457809 - 16457869
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    |||||||||| ||||| |||| ||||||||| |||||| ||  || |||||||||||||||    
T  16457809 gaacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaa 16457869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 30883274 - 30883182
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||||||||  ||  ||||||||| |||||| ||| || |||||||||||||||  ||||| |||  ||| || || ||||||||||    
T  30883274 aacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctcaccagtgtcaattt 30883182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 15048137 - 15048057
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| | | ||||||| || |||||||||| ||||||||||||||||||  ||||||||| |||||||||    
T  15048137 aacccacttgggttggcttaatggtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctc 15048057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 51903954 - 51903862
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||| |||||||||||| ||||||||| |||||||||| || |||||||||||||    ||||||||| |||| ||||| ||||||||||    
T  51903954 aacccacctgggttgacctgttggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaattt 51903862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 4222140 - 4222233
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||||||||| | |  ||||||||| |||||||||| || |||||||||||||||| ||| ||||| |||| ||||  ||||||||||    
T  4222140 gaacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaattt 4222233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 31520681 - 31520589
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||||| |||| ||| ||||| |||||||||| || ||||||||||||| |  ||| ||||| |||| ||||| ||||||||||    
T  31520681 aacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaattt 31520589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 9557320 - 9557390
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggtt 367  Q
    |||||||||| | || |||||| ||||||| ||||||||||||| ||||||||||||| | ||||||||||    
T  9557320 aacccacttgagctggcctgatagtattggcttgggatctgagagtgtgctcctcctcgagatctcaggtt 9557390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 27923121 - 27923012
Alignment:
Q  295 ggaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggt 394  Q
    ||||||||||| ||||| |||| ||||||||| ||||||  ||  | |||||||||||||| | ||||||||| ||||  | || ||||||| |||||||    
T  27923121 ggaacccacttaggttggcctggtggtattggcttgggacatggaagtgtgctcctcctcatagtctcaggttcgattcccacctgtgtcaa-tttgggt 27923023  T
Q  395 ggactaattta 405  Q
    |||||||||||    
T  27923022 ggactaattta 27923012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 10499185 - 10499078
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||||||||| |||| ||||||||| |||||||||| || | ||||| ||||  |  ||||||||| |||| |||||  |||||| |||||||||    
T  10499185 aacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaa-tttgggtgg 10499087  T
Q  397 actaattta 405  Q
     ||||||||    
T  10499086 gctaattta 10499078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 14186648 - 14186739
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||||| |||  ||||||||  |||||| ||| || |||||||||||||||  ||||||||| |||| ||||| ||||||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacctg-gagtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaattt 14186739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 30232330 - 30232422
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||||| |||| ||||||||||||| ||||||  | ||||||||||||||   |||||||||  ||| ||||| ||| ||||||    
T  30232330 aacccacttgggttgccctggtggtattggtttgcgatctggaactgtgctcctcctcatggtctcaggttccattctctccggtgccaattt 30232422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 363
Target Start/End: Complemental strand, 28928952 - 28928889
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctca 363  Q
    |||||||| ||| |||  ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  28928952 ccacttggattggcctagtggtattggcttgggatctgagagtgtgctcctcctcaaattctca 28928889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 413
Target Start/End: Original strand, 17034991 - 17035101
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggact 399  Q
    ||||||||||||  ||| ||||||||  |||||||||||||  |||||| |||||||  ||||||||| |||| ||  | || ||||||| |||||||||    
T  17034991 ccacttgggttgctctggtggtattgacttgggatctgaga--gtgctcatcctcaaggtctcaggttcgattctcctcggtatcaattt-gggtggact 17035087  T
Q  400 aatttaaattctta 413  Q
    ||||||| ||||||    
T  17035088 aatttaacttctta 17035101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 5499483 - 5499427
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcct 353  Q
    ||||||||||||||| |||| ||||||||  ||| ||||||||| ||||||||||||    
T  5499483 aacccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctcct 5499427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 21960548 - 21960608
Alignment:
Q  294 aggaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctc 354  Q
    ||||||||| ||||||||  ||| ||||||||| |||||| |||||| |||||||||||||    
T  21960548 aggaacccaattgggttgcgctggtggtattggcttgggacctgagagtgtgctcctcctc 21960608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 36720381 - 36720473
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||||||||  ||| ||||||||| ||||||| || || ||||||||||||| |  | ||||||| |||| ||||  ||||||||||    
T  36720381 aacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctctagtgtcaattt 36720473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 40063619 - 40063711
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||||||| |  | ||||||| ||||||||||||| | |||||||||| ||  ||||| ||| |||| ||||| ||| ||||||    
T  40063619 aacccacttgggttgacttagtagtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctccagtgccaattt 40063711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 46518628 - 46518708
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| | |  ||||||||| |||||||||| || |||||||||||||||  | ||||||| |||| ||||    
T  46518628 aacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctc 46518708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 14339610 - 14339685
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    |||||| |||| ||| |||| ||||||||| ||||||| || || |||||||||||||||  ||||||||| ||||    
T  14339610 aacccagttggattggcctggtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgatt 14339685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 30311306 - 30311381
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    ||||||| ||||||| |||  |||||| || |||||||||| || |||||||||||||||  ||||||||| ||||    
T  30311306 aacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 30311381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 32651493 - 32651422
Alignment:
Q  318 tggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||| |||||| ||| || ||||||||||||||| ||||||| || |||| ||||  ||||||||||    
T  32651493 tggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctctagtgtcaattt 32651422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 388
Target Start/End: Complemental strand, 45308974 - 45308887
Alignment:
Q  301 cacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaatt 388  Q
    |||||||||||  ||| ||||||||||||||||  || || | ||||||||||| |  ||||||||| |||||||| | |||||||||    
T  45308974 cacttgggttgttctggtggtattggtttgggacttgtgagtatgctcctcctcgaggtctcaggttcgattatcttcagtgtcaatt 45308887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 26481926 - 26482008
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcc 378  Q
    |||||||||||||||  | || ||||| ||| |||||| |||||| |||||||||||||||| | | ||||| |||| |||||    
T  26481926 gaacccacttgggttagcttggtggtaatggcttgggacctgagagtgtgctcctcctcaaagttttaggttcgattctctcc 26482008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 11642254 - 11642193
Alignment:
Q  328 ttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||| |||| ||||||||||  ||||||||| ||||||||   ||||||||||    
T  11642254 ttgggatctgagattgtgatcctcctcaaggtctcaggttcgattatctttagtgtcaattt 11642193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 25035736 - 25035797
Alignment:
Q  328 ttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||| |||||||||||||||||||| | || ||||||| |||| || || ||||||||||    
T  25035736 ttgggacctgagaatgtgctcctcctcgagatttcaggttcgattctcaccggtgtcaattt 25035797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 31789046 - 31788989
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctc 354  Q
    ||||||||||||||| |||  || |||||| |||||||||| || |||||||||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctc 31788989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 377
Target Start/End: Complemental strand, 37051371 - 37051290
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||||||||||||||  |  || ||||| ||||||||||| || |||| ||||||| ||| ||||||||| |||| ||||    
T  37051371 gaacccacttgggttgatttagtgatattgatttgggatctgggagtgtgttcctccttaaagtctcaggttcgattctctc 37051290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 44743900 - 44743839
Alignment:
Q  328 ttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||| || ||||||||||||| |  ||||||||| |||||||||| ||| ||||||    
T  44743900 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaattt 44743839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 16354968 - 16354888
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| |||  ||||||||| |||| | ||| || ||||||||||||||   ||||||||| |||| ||||    
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctc 16354888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 27093437 - 27093357
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| |||  ||||||||| |||| |  || || |||||||||||||||  ||||||||| |||| ||||    
T  27093437 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctc 27093357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 31295458 - 31295517
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaa-tgtgctcctcctcaaaat 359  Q
    ||||||||||||   ||||||||||| |||||||||| |||| ||||||||||||||||||    
T  31295458 ccacttgggttggtttgatggtattgatttgggatct-agaagtgtgctcctcctcaaaat 31295517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 37480075 - 37480182
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||||||||| |||| ||||||||| |||||| |||||| |||||||||||||||  ||||||||| |||| || || ||  ||| |||||||||    
T  37480075 aacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaa-tttgggtgg 37480173  T
Q  397 actaattta 405  Q
     ||||||||    
T  37480174 gctaattta 37480182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 42327473 - 42327364
Alignment:
Q  295 ggaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggt 394  Q
    ||||||||||||||||| |||  ||||||||| |||||| ||| || |||||||||||||||  ||||||||| |||| ||| | ||| ||| |||||||    
T  42327473 ggaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaa-tttgggt 42327375  T
Q  395 ggactaattta 405  Q
    || ||||||||    
T  42327374 gggctaattta 42327364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 4060290 - 4060198
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||||| |||  |||||||||||||  | |||||| |||||| |||||||| |||||||||| |||| ||||  ||||||||||    
T  4060290 aacccacttgggttggcctagtggtattggtttgaaacctgagagtgtgcttctcctcaagatctcaggttcgattctctctggtgtcaattt 4060198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 29503271 - 29503362
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||||| |||  |||||||||||||||| ||| || |||||||||||||||  ||||||||| |||| || || ||||||||||    
T  29503271 aacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc-ccggtgtcaattt 29503362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 377
Target Start/End: Complemental strand, 16918653 - 16918574
Alignment:
Q  298 acccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||||||||||| |||  |||||||||||||||||||| || |||||||||||||||  ||| ||||| |||| ||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctc 16918574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 7799111 - 7799019
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||||| |||| ||||||||| ||||||  || || ||||||||||||| | ||||||| || |||| ||||| ||| ||||||    
T  7799111 aacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaattt 7799019  T

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Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 413
Target Start/End: Original strand, 28846691 - 28846806
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||| |||||| ||  ||||||||  |||||| ||| || ||||||||||||| |  ||||||||| ||||||| ||  |||||| ||||||| |    
T  28846691 aacccacttaggttgatctagtggtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgattatcaccgatgtcaa-tttgggtag 28846789  T
Q  397 actaatttaaattctta 413  Q
    |||||||||| ||||||    
T  28846790 actaatttaacttctta 28846806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 42602554 - 42602661
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||||||||| |||  ||||||||| |||||| ||| || ||||||||| |||||  ||| ||||| |||| ||||| ||| ||| |||||||||    
T  42602554 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaa-tttgggtgg 42602652  T
Q  397 actaattta 405  Q
     ||||||||    
T  42602653 gctaattta 42602661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 356
Target Start/End: Complemental strand, 4439055 - 4438996
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    ||||||||||||||| ||| ||||||||   ||||||||||||| |||||||||||||||    
T  4439055 aacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctcaa 4438996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 34041664 - 34041589
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    ||||||||||||||| |||  ||||||||  || |||||||||| |||||||||||||||  ||||||||| ||||    
T  34041664 aacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgatt 34041589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 19099912 - 19099866
Alignment:
Q  298 acccacttgggttgacctgatggtattggtttgggatctgagaatgt 344  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||||    
T  19099912 acccacatgggttgagctgatggtattggtttgggatcttagaatgt 19099866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 19322768 - 19322848
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||||||||||||| ||  |||||||||||||||| ||| || |||||||||| ||||  |||| |||| |||| ||||    
T  19322768 aacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctc 19322848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 24191842 - 24191894
Alignment:
Q  301 cacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcct 353  Q
    |||||| |||| |||||||||||||| |||||| |||||| ||||||||||||    
T  24191842 cacttgagttggcctgatggtattggcttgggacctgagagtgtgctcctcct 24191894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 356
Target Start/End: Complemental strand, 16381730 - 16381671
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    ||||||||||||||| |||  |||||| || ||||||||||||| ||| |||||||||||    
T  16381730 aacccacttgggttggcctagtggtataggcttgggatctgagagtgttctcctcctcaa 16381671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 412
Target Start/End: Complemental strand, 31573693 - 31573603
Alignment:
Q  321 tattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggactaatttaaattctt 412  Q
    |||||||||| ||||||||| ||||||||||||  |  ||||||||| |||| ||| |  |||||| ||| ||||||||||||||| |||||    
T  31573693 tattggtttgagatctgagagtgtgctcctccttgatgtctcaggttcgattctcttcgatgtcaa-tttaggtggactaatttaacttctt 31573603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 377
Target Start/End: Original strand, 42922412 - 42922495
Alignment:
Q  295 ggaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaa-atctcaggttagattatctc 377  Q
    ||||||||||||||||| |||  ||||||||| |||| | ||| || ||||||||||||||||  ||||||||| |||| ||||    
T  42922412 ggaacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctc 42922495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 33962857 - 33962803
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctc 354  Q
    |||||||||||| ||| ||| ||||||||||||| ||| || |||||||||||||    
T  33962857 ccacttgggttggcctaatgatattggtttgggaactgggagtgtgctcctcctc 33962803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 22363262 - 22363173
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||| |||| |||||| |||||||||||  || || ||||||||||| |||||| |||| ||||| ||||  |||| ||| ||||||    
T  22363262 ccacttgagttggcctgatagtattggtttgcaatttgggaatgtgctccgcctcaagatctaaggttcgattccctccggtgccaattt 22363173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 23465996 - 23465927
Alignment:
Q  298 acccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggtt 367  Q
    ||||| ||||||||  || ||||||||||||| |||| || || | |||||||||||||| |||||||||    
T  23465996 acccatttgggttggtctaatggtattggtttaggatttgggagtatgctcctcctcaaagtctcaggtt 23465927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 19244109 - 19244189
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||||||||||||  ||  ||||||||  |||||| |||||| ||||||||||| |||  ||||||||| |||| ||||    
T  19244109 aacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctc 19244189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 25931006 - 25931054
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtg 345  Q
    |||||| |||||||| |||| |||||||||||||||| |||||| ||||    
T  25931006 aacccatttgggttggcctggtggtattggtttgggacctgagagtgtg 25931054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 37756046 - 37755994
Alignment:
Q  298 acccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcct 350  Q
    |||||||||||||| | || ||||||||| |||||| ||| ||||||||||||    
T  37756046 acccacttgggttggcttggtggtattggcttgggacctgggaatgtgctcct 37755994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 41908714 - 41908622
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||||| |||| |||| | |||||| || ||  || |||||||||||||||  ||||| ||| ||||||| || ||| ||||||    
T  41908714 aacccacttgggttggcctggtggtgtcggtttgagaccttggagtgtgctcctcctcaaggtctcaagttcgattatccccggtgccaattt 41908622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 412
Target Start/End: Original strand, 28363958 - 28364051
Alignment:
Q  318 tggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtggactaatttaaattctt 412  Q
    |||||||||||||||||||| || |||||||||||||||  |||||| || |||||||||  ||||||| ||||| ||| ||||||||| |||||    
T  28363958 tggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctggtgtcaa-tttggatgggctaatttaatttctt 28364051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 32613214 - 32613124
Alignment:
Q  299 cccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||||||||||| |||| ||||||||  ||||| |||| || ||||||||| ||||| |||||| ||| |||| ||| | ||||||||||    
T  32613214 cccacttgggttggcctggtggtattgacttggggtctgggagtgtgctccttctcaagatctcatgttcgattctcttcagtgtcaattt 32613124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 297 - 378
Target Start/End: Complemental strand, 32201961 - 32201880
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcc 378  Q
    |||||| |||||||||| || ||||||||| ||||||||| ||| ||||||||||||  || | ||| ||| ||||||||||    
T  32201961 aacccatttgggttgacttggtggtattggcttgggatctcagagtgtgctcctcctttaagtttcaagttcgattatctcc 32201880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 34293889 - 34293832
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaa 357  Q
    ||||||||||||||||  |||||||||||||| || || || ||||||||||||||||    
T  34293889 ccacttgggttgacctagtggtattggtttggaatttgggagtgtgctcctcctcaaa 34293832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 31623067 - 31622960
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    |||||||||||||||  | | ||||||||| |||||| ||| || ||||||||||||| |  ||||||||| || |  |||| ||||||| |||||||||    
T  31623067 aacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaa-tttgggtgg 31622969  T
Q  397 actaattta 405  Q
     ||||||||    
T  31622968 gctaattta 31622960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 33549104 - 33549184
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||||||||||||  ||| ||||||||| |||||| ||| || ||||||||||||| |  ||||||||| |||| ||||    
T  33549104 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 33549184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 356
Target Start/End: Complemental strand, 12188379 - 12188320
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    ||||||||||||||| |||  ||||||||| |||||| ||| || |||||||||||||||    
T  12188379 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaa 12188320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 32415429 - 32415378
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctc 348  Q
    |||||||||||||| ||||| | ||||||||||| || ||||||||||||||    
T  32415429 aacccacttgggttaacctggttgtattggtttgagacctgagaatgtgctc 32415378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 32421270 - 32421219
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctc 348  Q
    |||||||||||||| ||||| | ||||||||||| || ||||||||||||||    
T  32421270 aacccacttgggttaacctggttgtattggtttgagacctgagaatgtgctc 32421219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 354
Target Start/End: Complemental strand, 6776679 - 6776626
Alignment:
Q  301 cacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctc 354  Q
    ||||||||||| |||| ||||||||| |||||||||| |  |||||||||||||    
T  6776679 cacttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcctc 6776626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 3925743 - 3925811
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcag 364  Q
    ||||||| || |||||| ||  |||||||||||||| |||||||| |||| |||| |||||| ||||||    
T  3925743 gaacccatttaggttgaactagtggtattggtttggaatctgagagtgtgttccttctcaaagtctcag 3925811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 13227234 - 13227154
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| ||   |||||||||| || |||||| || ||||||||||||| || ||||| ||| |||| ||||    
T  13227234 aacccacttgggttggccatgtggtattggtatgagatctgggagtgtgctcctcctcgaagtctcaagttcgattctctc 13227154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 30127400 - 30127492
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||||||||  ||| ||||||||| ||||| |||| || |||||||||| || |  ||||||||| |||| | ||| ||| ||||||    
T  30127400 aacccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaattt 30127492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 23361725 - 23361633
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    |||||||||||||||||||| ||||||||  ||||||| || || |||||||||||||||  |||||||||  ||| ||||  ||||||||||    
T  23361725 aacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaattt 23361633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 19703563 - 19703488
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    ||||||||||||||| |||  ||||||||| |||||| |||||| |||||||||||||||  ||||||||| ||||    
T  19703563 aacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgatt 19703488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 4830487 - 4830557
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggtt 367  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||| |||| |||||||| |  |||||||||    
T  4830487 aacccacttgggttggcctggtggtatttgtttgggatctgagagtgtgttcctcctcgaggtctcaggtt 4830557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 413
Target Start/End: Complemental strand, 28898566 - 28898451
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtg 395  Q
    |||||||||| |||||||||  || |||||| |||| |||||||| ||||| ||||||||| || ||||||| |||| | ||  |||||||||| || ||    
T  28898566 gaacccacttaggttgacctagtgatattggcttggaatctgagagtgtgcccctcctcaatatttcaggttcgattttttct-gtgtcaattt-ggatg 28898469  T
Q  396 gactaatttaaattctta 413  Q
    ||||||||||| ||||||    
T  28898468 gactaatttaacttctta 28898451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 356
Target Start/End: Original strand, 28566105 - 28566164
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    |||||||||||||||||||  |||||||||||||||| || ||| ||||||||| |||||    
T  28566105 aacccacttgggttgacctagtggtattggtttgggaccttagagtgtgctccttctcaa 28566164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 356
Target Start/End: Original strand, 28573728 - 28573787
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    |||||||||||||||||||  |||||||||||||||| || ||| ||||||||| |||||    
T  28573728 aacccacttgggttgacctagtggtattggtttgggaccttagagtgtgctccttctcaa 28573787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 968361 - 968443
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcc 378  Q
    ||||||||||| |||| |||| ||||||||| |||||| ||| || ||||||||||||| |  ||||||||| |||| |||||    
T  968361 gaacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcc 968443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 8059632 - 8059702
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggtt 367  Q
    ||||||||||||||| |||||||||||||  |||| || ||||| |||| ||||||||||  |||||||||    
T  8059632 aacccacttgggttggcctgatggtattgacttggcatgtgagagtgtgatcctcctcaaggtctcaggtt 8059702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 7286209 - 7286261
Alignment:
Q  299 cccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctc 351  Q
    ||||||| |||||||||  |||||||||||||||||||| || ||||||||||    
T  7286209 cccacttaggttgacctagtggtattggtttgggatctgggagtgtgctcctc 7286261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 36205198 - 36205254
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    ||||||||||||  |||||| |||||||||| |||||| || |||||||||||||||    
T  36205198 ccacttgggttggtctgatgttattggtttgagatctgggagtgtgctcctcctcaa 36205254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 44780190 - 44780083
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||||||||| |||  ||| ||||| ||||||  || || |||||||||||||||  ||||||||| ||||  |||  ||||||| |||||||||    
T  44780190 aacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaa-tttgggtgg 44780092  T
Q  397 actaattta 405  Q
     ||||||||    
T  44780091 gctaattta 44780083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 3624582 - 3624661
Alignment:
Q  299 cccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcc 378  Q
    ||||||||||||| |||  ||||||||| |||||| ||| || |||||||||| ||||  ||||||||| |||| |||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctcc 3624661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 16852340 - 16852415
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    ||||||||||||||| |||  ||||||||| |||||| ||| || ||||||||||||| |  ||||||||| ||||    
T  16852340 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 16852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 356
Target Start/End: Original strand, 18897166 - 18897225
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaa 356  Q
    ||||||||||||||| |||  |||| ||||||||||| || ||| |||||||||||||||    
T  18897166 aacccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaa 18897225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 2203494 - 2203560
Alignment:
Q  299 cccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcagg 365  Q
    ||||||||||||| |||  ||||||||| |||||| ||| || |||||||||||||||  |||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagg 2203560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 14254726 - 14254780
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcct 350  Q
    ||||||||||||||||||||  | ||||||||||| |||||| || |||||||||    
T  14254726 gaacccacttgggttgacctagttgtattggtttgagatctgggagtgtgctcct 14254780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 26688865 - 26688935
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggtt 367  Q
    ||||||||||||||| |||| |||| |||| |||||| ||  || |||||||||||||||  |||||||||    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtt 26688935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 30483960 - 30483890
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggtt 367  Q
    ||||||||||||||| ||   ||||||||| ||||||| || || |||||||||||||| | |||||||||    
T  30483960 aacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggtt 30483890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 5264544 - 5264601
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctc 354  Q
    ||||||||||||||| |||  ||||||||| |||| | ||| ||||||||||||||||    
T  5264544 aacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctc 5264601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 377
Target Start/End: Original strand, 18540297 - 18540378
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||||||||||||| |||  ||||||||| |||||| ||| || ||| || ||||||||  ||||||||| |||| ||||    
T  18540297 gaacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctc 18540378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 20994534 - 20994453
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcct-cctcaaaatctcaggttagattatctc 377  Q
    ||||||||||||||| |||  ||||||||  |||||| ||| || ||||||||| ||||||| ||||||| | |||||||||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctccctcaaagtctcaggatcgattatctc 20994453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 5801047 - 5801099
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcc 349  Q
    |||||||||||||||||||| ||||||| | |||||||||  || ||||||||    
T  5801047 aacccacttgggttgacctggtggtattagcttgggatctaggagtgtgctcc 5801099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 11819776 - 11819883
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    |||||| |||||||| |||  |||||| || ||||||  || || |||||||||||||||  ||||||||| ||||  |||  ||||||| |||||||||    
T  11819776 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaa-tttgggtgg 11819874  T
Q  397 actaattta 405  Q
     ||||||||    
T  11819875 gctaattta 11819883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 27750730 - 27750837
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    |||||| |||||||| |||  |||||| || ||||||  || || |||||||||||||||  ||||||||| ||||  |||  ||||||| ||||| |||    
T  27750730 aacccatttgggttgccctcgtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaa-tttggatgg 27750828  T
Q  397 actaattta 405  Q
    |||||||||    
T  27750829 actaattta 27750837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 28636412 - 28636352
Alignment:
Q  304 ttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcag 364  Q
    ||||||||||||||| ||||||  |||||||||| || ||| ||| ||||||| |||||||    
T  28636412 ttgggttgacctgatagtattgacttgggatctgggagtgtactcttcctcaagatctcag 28636352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 28644146 - 28644086
Alignment:
Q  304 ttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcag 364  Q
    ||||||||||||||| ||||||  |||||||||| || ||| ||| ||||||| |||||||    
T  28644146 ttgggttgacctgatagtattgacttgggatctgggagtgtactcttcctcaagatctcag 28644086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 28653098 - 28653038
Alignment:
Q  304 ttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcag 364  Q
    ||||||||||||||| ||||||  |||||||||| || ||| ||| ||||||| |||||||    
T  28653098 ttgggttgacctgatagtattgacttgggatctgggagtgtactcttcctcaagatctcag 28653038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 28783060 - 28783167
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||||||||| | || ||||||||| ||| || ||| || |||||||||||||||  ||||| ||| |||| ||  | ||| ||| |||||||||    
T  28783060 aacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaa-tttgggtgg 28783158  T
Q  397 actaattta 405  Q
     ||||||||    
T  28783159 gctaattta 28783167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 29376474 - 29376547
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    |||||||||||||| | ||| ||||||||  |||||||||||||  ||||||||| | ||| ||||||||| ||||    
T  29376474 aacccacttgggttaatctgttggtattgacttgggatctgaga--gtgctcctctttaaagtctcaggtttgatt 29376547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 357
Target Start/End: Original strand, 42188350 - 42188410
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaa 357  Q
    ||||||||||| |||  ||||||||||||||||| || ||  || ||||||||||||||||    
T  42188350 aacccacttggattggactgatggtattggtttgtgacctaggattgtgctcctcctcaaa 42188410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 377
Target Start/End: Complemental strand, 910 - 836
Alignment:
Q  303 cttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||| || |||| ||||||||| |||||||||| |||||||||||||||| || ||||||||| |||| ||||    
T  910 cttggggtggcctggtggtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctc 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 372
Target Start/End: Complemental strand, 2547 - 2471
Alignment:
Q  296 gaacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagatt 372  Q
    ||||||| ||||||||  | | |||||||||||| ||||||| || |||||||||||||||  ||||||||| ||||    
T  2547 gaacccatttgggttggtccggtggtattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 15399 - 15319
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||||||||||||  ||| ||||||||| |||||| ||| || ||||||||||||| |  ||||||||| |||| ||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 13118 - 13030
Alignment:
Q  301 cacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattt 389  Q
    ||||| ||||| | || ||||||||| ||| |||||| || |||||||||||||||  ||||||||| |||| |||||  |||||||||    
T  13118 cacttcggttggcttggtggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaattt 13030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 405
Target Start/End: Complemental strand, 41709 - 41602
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctcccgtgtcaattttgggtgg 396  Q
    ||||||||||||||| |||  ||||||||| ||| ||||||||| | ||||||||||| |  |||||||||  ||| ||||   |||||| |||||||||    
T  41709 aacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaa-tttgggtgg 41611  T
Q  397 actaattta 405  Q
     ||||||||    
T  41610 gctaattta 41602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 377
Target Start/End: Original strand, 11534 - 11608
Alignment:
Q  303 cttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||| || |||| ||||||||| |||||||||| || ||||||||||||| |  ||||||||| |||| ||||    
T  11534 cttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 11608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 354
Target Start/End: Complemental strand, 157056 - 157006
Alignment:
Q  304 ttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctc 354  Q
    ||||||||||||| ||||||||| ||| |||||| || |||||||||||||    
T  157056 ttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctc 157006  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 377
Target Start/End: Complemental strand, 95044 - 94967
Alignment:
Q  300 ccacttgggttgacctgatggtattggtttgggatctgagaatgtgctcctcctcaaaatctcaggttagattatctc 377  Q
    |||||||||||| |||  ||||||||| |||| | ||| || |||||||||||||||  |||||||||  ||||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctc 94967  T

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Target: scaffold0417 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 10219 - 10259
Alignment:
Q  297 aacccacttgggttgacctgatggtattggtttgggatctg 337  Q
    ||||||||||||||| ||||||| |||||| ||||||||||    
T  10219 aacccacttgggttggcctgatgatattggcttgggatctg 10259  T

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