View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13432_high_2 (Length: 549)
Name: NF13432_high_2
Description: NF13432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13432_high_2 |
 |  |
|
| [»] scaffold0341 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 504; Significance: 0; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 504; E-Value: 0
Query Start/End: Original strand, 6 - 533
Target Start/End: Original strand, 47712866 - 47713393
Alignment:
| Q |
6 |
aggagcagagaagcgatagacttcatatctaatattacaacttggtttgacaactctacaaccaatcttgttataacagtaaattggaatttctgatata |
105 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47712866 |
aggatcagagaagcgatagacttcatatctaatattacaacttggtttgacaactctacaaccaatcttgttataacagtaaattggaatttctgatata |
47712965 |
T |
 |
| Q |
106 |
gcaaactctaaacaatcattgcaatcttgctctgacaaatcaggtgtacactgcacaagaccatatatggtttgaaaattcaaattcacatcagttgcat |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47712966 |
gcaaactctaaacaatcattgcaatcttgctctgacaaatcaggtgtacactgcacaagaccatatatggtttgaaaattcaaattcacatcagttgcat |
47713065 |
T |
 |
| Q |
206 |
tatccgcagcaaacttaagacgagaatcacttgatgcagctatttcttttagtttcctcatcaagtttccaagaactcgattaaatagatccacctcggt |
305 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
47713066 |
tatccgcagcaaacttaagacgagaatcacttgatgcagctatttctctcagtttcctcatcaagtttccaagaactcgattaaatggatccacctcggt |
47713165 |
T |
 |
| Q |
306 |
tacattgttcgggtttgacatataaaactttggtgaccattcaagaatgccaaatattgatcggtttgagtaacgcaacatgtagtcctcataccaacca |
405 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47713166 |
tacattgttcgggttcgacatataaaactttggtgaccattcaagaatgccaaatattgattggtttgagtaacgcaacatgtagtcctcataccaacca |
47713265 |
T |
 |
| Q |
406 |
attgcttctttttggtttggacaaagttttgtgagaagaactcttgaatcattgagacgactgcggcaaacatcaggtttaacatctcctctgcagagtc |
505 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47713266 |
attgcttctttttggtttggacaaagttttgtgagaagaactcttgaatcattgagacgactgcggcaaacatcaggtttaacatctcctctgcagagtc |
47713365 |
T |
 |
| Q |
506 |
caatggcgtttactttgtcggtgttttg |
533 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
47713366 |
caatggcgtttactttgtcggtgttttg |
47713393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 27 - 533
Target Start/End: Original strand, 47759802 - 47760308
Alignment:
| Q |
27 |
ttcatatctaatattacaacttggtttgacaactctacaaccaatcttgttataacagtaaattggaatttctgatatagcaaactctaaacaatcattg |
126 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||| |||||||||||||| ||| || ||||||| ||||| |||||| |||||||||| |||| |
|
|
| T |
47759802 |
ttcatatctgatattacaacttggtttgagaactctaccaccaatcttgttattacaacaacttggaatatctgagatagcaccatctaaacaattattg |
47759901 |
T |
 |
| Q |
127 |
caatcttgctctgacaaatcaggtgtacactgcacaagaccatatatggtttgaaaattcaaattcacatcagttgcattatccgcagcaaacttaagac |
226 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||| ||| ||| |
|
|
| T |
47759902 |
caatcttgctctgacaaatcaggtgtgcactgaacaagaccatatatggtttgaaaattcaaatttacatcagttgcattatctgtagcaaatttacgac |
47760001 |
T |
 |
| Q |
227 |
gagaatcacttgatgcagctatttcttttagtttcctcatcaagtttccaagaactcgattaaatagatccacctcggttacattgttcgggtttgacat |
326 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||| | |||||| |||||||||| |||||||| | ||| |||| |
|
|
| T |
47760002 |
gagaatcacttgatgcagctttctctttcagtttcctcatcaagttcccaagaacttggttaaattgatccacctctgttacattatatatgttccacat |
47760101 |
T |
 |
| Q |
327 |
ataaaactttggtgaccattcaagaatgccaaatattgatcggtttgagtaacgcaacatgtagtcctcataccaaccaattgcttctttttggtttgga |
426 |
Q |
| |
|
||||||||||||||| | ||| | || ||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
47760102 |
ataaaactttggtgaaccttccataacgccgaatattgatcggtttgagtaacgcaacatgcagttatcataccaaccaattgcttctttttggtttgga |
47760201 |
T |
 |
| Q |
427 |
caaagttttgtgagaagaactcttgaatcattgagacgactgcggcaaacatcaggtttaacatctcctctgcagagtccaatggcgtttactttgtcgg |
526 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
47760202 |
caaagttttgtgagaagaactcttgaatcgttgagacaactgcggcaaacgtcgggtttaacatctcctctacagagtccaatggcgtttactttgtcag |
47760301 |
T |
 |
| Q |
527 |
tgttttg |
533 |
Q |
| |
|
||||||| |
|
|
| T |
47760302 |
tgttttg |
47760308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 21 - 533
Target Start/End: Original strand, 47717684 - 47718187
Alignment:
| Q |
21 |
atagacttcatatctaatattacaacttggtttgacaactctacaaccaatcttgttataacagtaaattggaatttctgatatagcaaactctaaacaa |
120 |
Q |
| |
|
||||| ||||| ||||||||| ||||||||||||| |||| ||| |||| |||||||| | | ||||| ||||||||||| |||||| |||||||||| |
|
|
| T |
47717684 |
atagatttcatgtctaatattgcaacttggtttgagaactataccgccaaccttgttattaaaataaataggaatttctgaaatagcacgctctaaacaa |
47717783 |
T |
 |
| Q |
121 |
tcattgcaatcttgctctgacaaatcaggtgtacactgcacaagaccatatatggtttgaaaattcaaattcacatcagttgcattatccgcagcaaact |
220 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| | | |||||||| |
|
|
| T |
47717784 |
tcattgcaatcttgctgtgataaatcaggtgtacactgcacaagaccatatgtggtttcaaaattcaaa---------gttgcattagcggtagcaaact |
47717874 |
T |
 |
| Q |
221 |
taagacgagaatcacttgatgcagctatttcttttagtttcctcatcaagtttccaagaactcgattaaatagatccacctcggttacattgttcgggtt |
320 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||| |||| ||| | | |
|
|
| T |
47717875 |
tacgacgagaatcacttgatgctgctatttctttgagtttcctcatcaagttcccaagaacttgattaaattgatccacctcggttgcatttttcaaggt |
47717974 |
T |
 |
| Q |
321 |
tgacatataaaactttggtgaccattcaagaatgccaaatattgatcggtttgagtaacgcaacatgtagtcctcataccaaccaattgcttctttttgg |
420 |
Q |
| |
|
|| | || | ||||| ||| | || ||| |||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||| |
|
|
| T |
47717975 |
ccactttaaatatgaaggtgaagcttccataacgccgaatattgatcggtttgagtaacgcaacatgcagtcaacataccaaccaatcgcttctttttgg |
47718074 |
T |
 |
| Q |
421 |
tttggacaaagttttgtgagaagaactcttgaatcattgagacgactgcggcaaacatcaggtttaacatctcctctgcagagtccaatggcgtttactt |
520 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
47718075 |
tttggacaaagttttgtgagaagaactcttgaatcattgagacaacttcggcaaacgtcaggtttaacatctcctctgcagaggccaacggcgtttactt |
47718174 |
T |
 |
| Q |
521 |
tgtcggtgttttg |
533 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
47718175 |
tgtcagtgttttg |
47718187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 27 - 533
Target Start/End: Original strand, 47745479 - 47745976
Alignment:
| Q |
27 |
ttcatatctaatattacaacttggtttgacaactctacaaccaatcttgttataacagtaaattggaatttctgatatagcaaactctaaacaatcattg |
126 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||||||| |||||||||||||||| | || ||||| ||||||| |||||| |||||||||||||||| |
|
|
| T |
47745479 |
ttcatatctaatattacaacttagtttgagaactctaccaccaatcttgttataaaaaaaacttggagtttctgaaatagcacgctctaaacaatcattg |
47745578 |
T |
 |
| Q |
127 |
caatcttgctctgacaaatcaggtgtacactgcacaagaccatatatggtttgaaaattcaaattcacatcagttgcattatccgcagcaaacttaagac |
226 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| | | |||||||||| ||| |
|
|
| T |
47745579 |
caatcttgtcctgacaagtcaggtgtacactgcacaagaccatatatggtttcaaaattcaaa---------gttgcattagcggtagcaaacttacgac |
47745669 |
T |
 |
| Q |
227 |
gagaatcacttgatgcagctatttcttttagtttcctcatcaagtttccaagaactcgattaaatagatccacctcggttacattgttcgggtttgacat |
326 |
Q |
| |
|
||||||||| ||||||||||||||| || ||||||||||||||||| ||||||||| |||||||| || |||| ||||||||||| | ||| || | |
|
|
| T |
47745670 |
gagaatcacctgatgcagctatttcattgagtttcctcatcaagttcccaagaacttgattaaattgagccacatcggttacatttctattgttccactt |
47745769 |
T |
 |
| Q |
327 |
ataaaactttggtgaccattcaagaatgccaaatattgatcggtttgagtaacgcaacatgtagtcctcataccaaccaattgcttctttttggtttgga |
426 |
Q |
| |
|
|||| | ||| || | ||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||| ||||| |
|
|
| T |
47745770 |
ataatatgaaaatgaagtatccataatgccaaatattgatcggtttgagtaacgcaacatgcagttatcataccaactaattgcttctttttgggttgga |
47745869 |
T |
 |
| Q |
427 |
caaagttttgtgagaagaactcttgaatcattgagacgactgcggcaaacatcaggtttaacatctcctctgcagagtccaatggcgtttactttgtcgg |
526 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
47745870 |
caaagttttgtgagaagaactcttgaatcgttgagacaactgcggcaaaggtcgggtttaacatctcctctgcagagtccaatggcgtttactttatcag |
47745969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 530
Target Start/End: Complemental strand, 6521811 - 6521630
Alignment:
| Q |
355 |
ccaaatattgatcggtttgagtaacgcaacatgtagtcctcat------accaaccaattgcttctttttggtttggacaaagttttgtgagaagaactc |
448 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| | || |||| |||| ||||||||||||||| ||||| ||||| ||| ||| |||||||| |
|
|
| T |
6521811 |
ccaaatattgaacggtttgagtaacgcaacatgcattcttcatcgttgtaccatccaattgcttcttttcggttttgacaatgttgtgttagaagaacag |
6521712 |
T |
 |
| Q |
449 |
ttgaatcattgagacgactgcggcaaacatcaggtttaacatctcctctgcagagtccaatggcgtttactttgtcggtgtt |
530 |
Q |
| |
|
|||||| ||||| | | | | ||| ||| |||| ||||||||||| || |||||||| |||||||||||||| ||||| |
|
|
| T |
6521711 |
ttgaatttttgaggcaattttgacaatcattgagtttgacatctcctctacatagtccaatcgcgtttactttgtcagtgtt |
6521630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 441
Target Start/End: Complemental strand, 6523768 - 6523721
Alignment:
| Q |
394 |
tcataccaaccaattgcttctttttggtttggacaaagttttgtgaga |
441 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
6523768 |
tcataccaaccaattgcttctttttggtttggacaaagctgtgtgaga |
6523721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 47704889 - 47704941
Alignment:
| Q |
27 |
ttcatatctaatattacaacttggtttgacaactctacaaccaatcttgttat |
79 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||| | |||||||||||||| |
|
|
| T |
47704889 |
ttcatatctaatattgcaacttggtttgataactcttccaccaatcttgttat |
47704941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 531
Target Start/End: Original strand, 6507051 - 6507106
Alignment:
| Q |
476 |
catcaggtttaacatctcctctgcagagtccaatggcgtttactttgtcggtgttt |
531 |
Q |
| |
|
|||| ||||| ||||||||||| || |||||||| ||||||||||||||||||||| |
|
|
| T |
6507051 |
catcgggtttgacatctcctctacacagtccaatagcgtttactttgtcggtgttt |
6507106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 357 - 441
Target Start/End: Complemental strand, 47778127 - 47778037
Alignment:
| Q |
357 |
aaatattgatcggtttgagtaacgcaacatgtagt------cctcataccaaccaattgcttctttttggtttggacaaagttttgtgaga |
441 |
Q |
| |
|
||||||||| |||| |||||||||||||||| | | |||| ||||||||||||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
47778127 |
aaatattgaacggtctgagtaacgcaacatgcatttttcatcctcgtaccaaccaattgcttcctttttgtttggacaaagttgtgtgaga |
47778037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 6512957 - 6513007
Alignment:
| Q |
481 |
ggtttaacatctcctctgcagagtccaatggcgtttactttgtcggtgttt |
531 |
Q |
| |
|
||||| ||||||||||| || |||||||| ||||||||||||||||||||| |
|
|
| T |
6512957 |
ggtttgacatctcctctacaaagtccaatagcgtttactttgtcggtgttt |
6513007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 531
Target Start/End: Original strand, 6517364 - 6517406
Alignment:
| Q |
489 |
atctcctctgcagagtccaatggcgtttactttgtcggtgttt |
531 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||| ||||| |
|
|
| T |
6517364 |
atctcctctgcatagtccaattgcgtttactttgtcgctgttt |
6517406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 47811779 - 47811738
Alignment:
| Q |
139 |
gacaaatcaggtgtacactgcacaagaccatatatggtttga |
180 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| |||||| |
|
|
| T |
47811779 |
gacaaatcaggtgtacactgaacaagaccatttattgtttga |
47811738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 6522027 - 6521987
Alignment:
| Q |
139 |
gacaaatcaggtgtacactgcacaagaccatatatggtttg |
179 |
Q |
| |
|
|||||||||||||| || || |||||||||||||||||||| |
|
|
| T |
6522027 |
gacaaatcaggtgtgcattgaacaagaccatatatggtttg |
6521987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 54; Significance: 9e-22; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 402 - 523
Target Start/End: Original strand, 28856511 - 28856632
Alignment:
| Q |
402 |
accaattgcttctttttggtttggacaaagttttgtgagaagaactcttgaatcattgagacgactgcggcaaacatcaggtttaacatctcctctgcag |
501 |
Q |
| |
|
||||||||||||||||| |||||||||| || ||| |||||||||||||||| || |||| |||||||||| ||| || ||||||||||||||||| |
|
|
| T |
28856511 |
accaattgcttcttttttgtttggacaattttgtgttagaagaactcttgaattgttaagacaactgcggcaatcatttggattaacatctcctctgcat |
28856610 |
T |
 |
| Q |
502 |
agtccaatggcgtttactttgt |
523 |
Q |
| |
|
| ||| ||||||| |||||||| |
|
|
| T |
28856611 |
aatcctatggcgtatactttgt |
28856632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 523
Target Start/End: Original strand, 28861785 - 28861909
Alignment:
| Q |
399 |
ccaaccaattgcttctttttggtttggacaaagttttgtgagaagaactcttgaatcattgagacgactgcggcaaacatcaggtttaacatctcctctg |
498 |
Q |
| |
|
|||||||||||||||||||||||| ||||| || ||| |||||||||||||||| || |||| |||||||||| ||| || ||||||||||||||| |
|
|
| T |
28861785 |
ccaaccaattgcttctttttggttaggacatttttgtgttagaagaactcttgaattgttaagacaactgcggcaatcatttggattaacatctcctctg |
28861884 |
T |
 |
| Q |
499 |
cagagtccaatggcgtttactttgt |
523 |
Q |
| |
|
|| | ||| ||||||| |||||||| |
|
|
| T |
28861885 |
cataatcctatggcgtatactttgt |
28861909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 523
Target Start/End: Original strand, 28831268 - 28831436
Alignment:
| Q |
355 |
ccaaatattgatcggtttgagtaacgcaacatgtagtcctcataccaaccaattgcttctttttggtttggacaaagttttgtgagaagaactcttgaat |
454 |
Q |
| |
|
|||||||| || || || ||||||||||||||| | | ||| |||| ||||||||||||||||||||||||| || ||| |||||||||||||||| |
|
|
| T |
28831268 |
ccaaatatggaccgattggagtaacgcaacatgcaattgtcagtccaaataattgcttctttttggtttggacaattttgtgttagaagaactcttgaat |
28831367 |
T |
 |
| Q |
455 |
cattgagacgactgcggcaaacatcaggtttaacatctcctctgcagagtccaatggcgtttactttgt |
523 |
Q |
| |
|
|| ||| || ||||||| ||| || |||||||||||||| || | ||| ||||||| |||||||| |
|
|
| T |
28831368 |
tgttaagataacggcggcaatcatttggattaacatctcctctacataatcctatggcgtatactttgt |
28831436 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 28875835 - 28875908
Alignment:
| Q |
355 |
ccaaatattgatcggtttgagtaacgcaacatgtagtcctcataccaaccaattgcttctttttggtttggaca |
428 |
Q |
| |
|
||||||||||| ||| |||||||||||| |||| ||| ||| ||||||||||||||||||| ||| |||||| |
|
|
| T |
28875835 |
ccaaatattgaccggcttgagtaacgcagcatgcagttgtcaatccaaccaattgcttcttttcggtatggaca |
28875908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 28830931 - 28830976
Alignment:
| Q |
27 |
ttcatatctaatattacaacttggtttgacaactctacaaccaatc |
72 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||| ||||||| |
|
|
| T |
28830931 |
ttcatatctaatattacaacttggtttcataactctagcaccaatc |
28830976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0341
Description:
Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 531
Target Start/End: Original strand, 1076 - 1131
Alignment:
| Q |
476 |
catcaggtttaacatctcctctgcagagtccaatggcgtttactttgtcggtgttt |
531 |
Q |
| |
|
|||| ||||| ||||||||||| || |||||||| ||||||||||||||||||||| |
|
|
| T |
1076 |
catcgggtttgacatctcctctacacagtccaatagcgtttactttgtcggtgttt |
1131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0341; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 531
Target Start/End: Original strand, 8730 - 8785
Alignment:
| Q |
476 |
catcaggtttaacatctcctctgcagagtccaatggcgtttactttgtcggtgttt |
531 |
Q |
| |
|
|||| ||||| ||||||||||| || |||||||| ||||||||||||||||||||| |
|
|
| T |
8730 |
catcgggtttgacatctcctctacacagtccaatagcgtttactttgtcggtgttt |
8785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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