View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13432_low_7 (Length: 367)
Name: NF13432_low_7
Description: NF13432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13432_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 32 - 353
Target Start/End: Original strand, 43094077 - 43094396
Alignment:
| Q |
32 |
gacaacgaaaggaggttgttatattgttagatgnnnnnnnnnngttttcattaacgttaaaattaggagttactacaaacaatccgtatagggccccaca |
131 |
Q |
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| T |
43094077 |
gacaacgaaaggaggttgttatattgttagatggttttttt--gttttcattaacgttaaaattaggagttactacaaacaatccgtatagggccccaca |
43094174 |
T |
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| Q |
132 |
taatctgacacccaatccttgctgtaacaattgtttctgttgaagnnnnnnnnccttccctccttttgtcctttccttctcttctcacaagggcacgtta |
231 |
Q |
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| T |
43094175 |
taatctgacacccaatccttgctgtaacaattgtttctgttgaagttttttttccttccctccttttgtcctttccttctcttctcacaagggcacgtta |
43094274 |
T |
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| Q |
232 |
ccttcatttgcaaggaatatttccaattctcatgcaaaggtgtgttagaatgtggcctctcctctattaattcttgatcctttagttttatcatcaataa |
331 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
43094275 |
ccttcatttgcaaggaatatttccaattctcatgcaaaggtgtgttagaatgtggcctctcctctattaattcttgatcctttagttttattatcaataa |
43094374 |
T |
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| Q |
332 |
ttaattagttatttgtttttgt |
353 |
Q |
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|||||||||||||||| ||||| |
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| T |
43094375 |
ttaattagttatttgtgtttgt |
43094396 |
T |
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