View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13432_low_8 (Length: 347)
Name: NF13432_low_8
Description: NF13432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13432_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 8 - 324
Target Start/End: Complemental strand, 6730500 - 6730192
Alignment:
| Q |
8 |
ccaagaatatccttcattgcaaccccaaagaaactatat-ccatatttcaattaacattcaaatcattttatttggtgtcttgtaaaatacaaagaagca |
106 |
Q |
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| T |
6730500 |
ccaataatatccttcattgcaaccc-aaagaaaagatattccatatctcaattaacattcaaatcattttatttggtgtcttgtaaaatacaaagaagca |
6730402 |
T |
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| Q |
107 |
aggttgtcaaactcatatactcatacgagtttagctctttttaaaataatattaaaatcatttcttggtggtttgttattactttggttgatgggtcaaa |
206 |
Q |
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| T |
6730401 |
aggttgtcaaactgata--------cgagtttagctctttttaaaataatattaaaatcatttcttggtggtttgttattactttggttggtgggtcaaa |
6730310 |
T |
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| Q |
207 |
tacttctacttaatcccggtttgtgcataaagtgtcaattgtacaatgnnnnnnnctaattaaacttctcaaagtcacctttatattttatgcatataag |
306 |
Q |
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| T |
6730309 |
tacttctacttaatcccggtttgtgcataaagtgtcgattgtacaatgaaaaaaactaattaaacttctcaaagtcacctttatattttatgcatataag |
6730210 |
T |
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| Q |
307 |
ctcagttttttaacaatg |
324 |
Q |
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|||||||||||||||||| |
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| T |
6730209 |
ctcagttttttaacaatg |
6730192 |
T |
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