View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13433_low_2 (Length: 685)

Name: NF13433_low_2
Description: NF13433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13433_low_2
NF13433_low_2
[»] chr3 (89 HSPs)
chr3 (11-584)||(7570990-7571549)
chr3 (11-357)||(758140-758488)
chr3 (11-357)||(23665895-23666243)
chr3 (11-357)||(24038143-24038491)
chr3 (11-357)||(20520027-20520375)
chr3 (11-357)||(18467198-18467546)
chr3 (11-357)||(29350213-29350561)
chr3 (11-357)||(39775500-39775848)
chr3 (11-357)||(18471981-18472328)
chr3 (34-357)||(3418968-3419291)
chr3 (11-357)||(14438471-14438815)
chr3 (16-357)||(3657017-3657360)
chr3 (11-348)||(55431297-55431636)
chr3 (11-297)||(23661236-23661524)
chr3 (66-471)||(3692491-3692879)
chr3 (66-471)||(8887803-8888191)
chr3 (66-357)||(8069653-8069940)
chr3 (50-285)||(46964061-46964297)
chr3 (66-357)||(3672559-3672847)
chr3 (11-247)||(2207521-2207757)
chr3 (66-520)||(12965700-12966140)
chr3 (11-307)||(27708959-27709253)
chr3 (134-357)||(49971319-49971544)
chr3 (77-357)||(32474517-32474798)
chr3 (11-261)||(55325847-55326097)
chr3 (66-357)||(3033617-3033905)
chr3 (66-357)||(8883143-8883431)
chr3 (11-366)||(25726562-25726921)
chr3 (66-348)||(12971460-12971744)
chr3 (131-481)||(12112533-12112883)
chr3 (66-263)||(6596189-6596381)
chr3 (376-612)||(6606781-6607016)
chr3 (11-172)||(10708449-10708613)
chr3 (37-345)||(17025904-17026213)
chr3 (202-357)||(29715617-29715774)
chr3 (66-182)||(10586016-10586127)
chr3 (239-342)||(26962050-26962154)
chr3 (66-182)||(31002847-31002958)
chr3 (66-231)||(28125244-28125403)
chr3 (123-285)||(20507699-20507866)
chr3 (208-366)||(28125081-28125242)
chr3 (239-336)||(13022024-13022122)
chr3 (283-353)||(27708855-27708925)
chr3 (239-336)||(33089343-33089441)
chr3 (77-366)||(19276760-19277049)
chr3 (239-333)||(20090662-20090757)
chr3 (239-333)||(20095787-20095882)
chr3 (239-333)||(34129169-34129264)
chr3 (239-336)||(20810369-20810467)
chr3 (66-132)||(45904371-45904437)
chr3 (66-132)||(45904827-45904893)
chr3 (239-336)||(53119524-53119622)
chr3 (377-489)||(18471863-18471976)
chr3 (239-342)||(15768191-15768295)
chr3 (377-471)||(23661575-23661671)
chr3 (239-333)||(3476946-3477041)
chr3 (239-333)||(15763030-15763125)
chr3 (66-315)||(16013724-16013968)
chr3 (239-333)||(17368719-17368814)
chr3 (239-336)||(38436991-38437089)
chr3 (377-424)||(29350160-29350208)
chr3 (289-348)||(2207759-2207818)
chr3 (239-336)||(2617256-2617355)
chr3 (239-333)||(30341844-30341939)
chr3 (239-333)||(54270644-54270739)
chr3 (239-333)||(17364063-17364160)
chr3 (377-423)||(27708800-27708846)
chr3 (266-331)||(10321444-10321509)
chr3 (377-421)||(39775853-39775898)
chr3 (377-420)||(3672510-3672554)
chr3 (540-612)||(12112936-12113008)
chr3 (61-97)||(13156223-13156259)
chr3 (321-357)||(23661534-23661570)
chr3 (239-333)||(3482423-3482518)
chr3 (379-429)||(16013635-16013686)
chr3 (66-97)||(35457635-35457666)
chr3 (137-247)||(47567093-47567203)
chr3 (283-318)||(48432423-48432458)
chr3 (239-333)||(55128790-55128885)
chr3 (239-333)||(17357836-17357933)
chr3 (66-96)||(47566975-47567005)
chr3 (286-331)||(1688935-1688980)
chr3 (380-420)||(14438823-14438864)
chr3 (266-342)||(27605163-27605240)
chr3 (266-342)||(4117628-4117704)
chr3 (377-420)||(8069603-8069647)
chr3 (61-97)||(13166963-13166999)
chr3 (377-420)||(23666248-23666292)
chr3 (377-420)||(24038496-24038540)
[»] chr4 (93 HSPs)
chr4 (11-523)||(37259649-37260148)
chr4 (11-357)||(37264336-37264684)
chr4 (11-357)||(16421004-16421352)
chr4 (11-471)||(31273396-31273836)
chr4 (11-357)||(31269009-31269349)
chr4 (11-348)||(8693695-8694034)
chr4 (11-355)||(12823673-12824013)
chr4 (11-357)||(19101952-19102300)
chr4 (69-348)||(55251704-55251984)
chr4 (11-357)||(5927991-5928339)
chr4 (11-357)||(13059385-13059732)
chr4 (11-357)||(51697892-51698239)
chr4 (11-318)||(31729163-31729468)
chr4 (11-357)||(47244223-47244571)
chr4 (11-357)||(5271195-5271539)
chr4 (11-357)||(19106594-19106931)
chr4 (66-357)||(33463183-33463476)
chr4 (37-345)||(19540959-19541269)
chr4 (66-342)||(48276476-48276749)
chr4 (66-357)||(8030303-8030596)
chr4 (66-355)||(13521821-13522110)
chr4 (66-357)||(33468800-33469093)
chr4 (69-464)||(12878109-12878503)
chr4 (29-334)||(40408196-40408507)
chr4 (61-348)||(42758573-42758866)
chr4 (11-199)||(13065589-13065776)
chr4 (66-357)||(19906226-19906518)
chr4 (11-203)||(15134283-15134476)
chr4 (165-441)||(32082017-32082280)
chr4 (124-359)||(4550971-4551203)
chr4 (154-357)||(2819819-2820024)
chr4 (222-357)||(31765861-31765998)
chr4 (11-143)||(31766001-31766133)
chr4 (137-357)||(47574600-47574817)
chr4 (127-361)||(12874510-12874746)
chr4 (11-131)||(32081904-32082024)
chr4 (66-182)||(7902939-7903050)
chr4 (73-252)||(8649469-8649643)
chr4 (73-252)||(8661276-8661450)
chr4 (263-365)||(13065793-13065896)
chr4 (66-171)||(34560588-34560688)
chr4 (66-182)||(3997890-3998001)
chr4 (377-504)||(32221222-32221350)
chr4 (11-111)||(6942991-6943091)
chr4 (66-182)||(31298221-31298332)
chr4 (239-333)||(653043-653138)
chr4 (263-345)||(51696989-51697072)
chr4 (241-342)||(10120811-10120913)
chr4 (69-177)||(39319730-39319833)
chr4 (66-173)||(47574817-47574920)
chr4 (166-260)||(16948075-16948169)
chr4 (239-333)||(36354176-36354271)
chr4 (239-333)||(36359294-36359389)
chr4 (239-333)||(39999069-39999164)
chr4 (239-333)||(40004027-40004122)
chr4 (239-333)||(53797629-53797724)
chr4 (266-333)||(54343203-54343270)
chr4 (239-333)||(54348357-54348452)
chr4 (239-333)||(8980285-8980380)
chr4 (239-333)||(8985405-8985500)
chr4 (239-333)||(13700510-13700605)
chr4 (237-310)||(16953107-16953182)
chr4 (239-333)||(21299833-21299928)
chr4 (239-336)||(24490028-24490127)
chr4 (121-202)||(39217271-39217356)
chr4 (239-333)||(41393245-41393340)
chr4 (239-333)||(51019373-51019468)
chr4 (274-340)||(52691091-52691158)
chr4 (239-333)||(54991486-54991581)
chr4 (303-357)||(32221163-32221217)
chr4 (411-586)||(33463494-33463668)
chr4 (68-182)||(41816935-41817044)
chr4 (299-356)||(6070563-6070620)
chr4 (11-228)||(23093214-23093425)
chr4 (137-357)||(32545069-32545293)
chr4 (239-333)||(13695159-13695254)
chr4 (239-333)||(13710669-13710763)
chr4 (239-333)||(21304953-21305048)
chr4 (411-612)||(39319372-39319572)
chr4 (239-333)||(47046307-47046402)
chr4 (377-471)||(51697789-51697883)
chr4 (114-195)||(55810154-55810234)
chr4 (11-64)||(4551242-4551295)
chr4 (13-100)||(52690902-52690990)
chr4 (274-348)||(1151334-1151409)
chr4 (69-132)||(42316543-42316606)
chr4 (121-249)||(9362416-9362548)
chr4 (238-318)||(16595933-16596014)
chr4 (377-421)||(8693636-8693681)
chr4 (303-336)||(10318845-10318878)
chr4 (266-318)||(30564442-30564495)
chr4 (16-100)||(39217187-39217272)
chr4 (377-420)||(37264689-37264733)
[»] chr5 (71 HSPs)
chr5 (11-357)||(29167745-29168093)
chr5 (11-357)||(26667247-26667595)
chr5 (11-357)||(26938844-26939192)
chr5 (18-357)||(10759600-10759939)
chr5 (66-471)||(561342-561730)
chr5 (33-357)||(12103000-12103326)
chr5 (11-357)||(35679648-35679994)
chr5 (11-357)||(36423612-36423960)
chr5 (11-357)||(37248576-37248915)
chr5 (18-357)||(7451733-7452070)
chr5 (11-357)||(36428684-36429032)
chr5 (11-345)||(20180835-20181171)
chr5 (66-471)||(39522923-39523316)
chr5 (66-357)||(556670-556958)
chr5 (66-357)||(39518385-39518677)
chr5 (11-357)||(40147870-40148218)
chr5 (69-357)||(6155249-6155539)
chr5 (83-357)||(6514444-6514721)
chr5 (77-357)||(12501737-12502019)
chr5 (66-471)||(42001309-42001692)
chr5 (65-560)||(11981106-11981589)
chr5 (66-357)||(36942097-36942385)
chr5 (66-335)||(32461381-32461647)
chr5 (66-357)||(36937343-36937631)
chr5 (49-365)||(12102639-12102959)
chr5 (66-357)||(12044971-12045259)
chr5 (125-357)||(41587048-41587280)
chr5 (66-357)||(41996640-41996923)
chr5 (137-355)||(3665909-3666129)
chr5 (16-366)||(15414658-15415010)
chr5 (79-357)||(12041772-12042054)
chr5 (11-348)||(16116020-16116360)
chr5 (66-263)||(4871993-4872190)
chr5 (69-230)||(9726518-9726678)
chr5 (66-361)||(9911124-9911412)
chr5 (42-215)||(34707341-34707513)
chr5 (66-182)||(13301315-13301426)
chr5 (237-357)||(37652828-37652950)
chr5 (66-182)||(21323799-21323910)
chr5 (66-182)||(1429828-1429938)
chr5 (411-585)||(23977484-23977656)
chr5 (66-182)||(31731694-31731805)
chr5 (239-333)||(13582690-13582785)
chr5 (239-333)||(24435869-24435964)
chr5 (239-336)||(7805068-7805166)
chr5 (239-336)||(14374132-14374230)
chr5 (406-471)||(36937644-36937709)
chr5 (239-333)||(36253826-36253921)
chr5 (237-285)||(37550030-37550079)
chr5 (266-342)||(24776843-24776919)
chr5 (239-333)||(17510058-17510153)
chr5 (66-108)||(3666131-3666173)
chr5 (11-100)||(37549925-37550014)
chr5 (11-100)||(37652723-37652812)
chr5 (238-333)||(24771356-24771452)
chr5 (266-333)||(42019573-42019640)
chr5 (239-333)||(26709102-26709199)
chr5 (239-333)||(26978836-26978933)
chr5 (238-342)||(1414050-1414155)
chr5 (16-81)||(6513703-6513768)
chr5 (377-420)||(10759948-10759992)
chr5 (377-420)||(39518336-39518380)
chr5 (76-189)||(17158456-17158573)
chr5 (266-333)||(17504953-17505020)
chr5 (239-333)||(41858593-41858688)
chr5 (406-464)||(15415026-15415084)
chr5 (377-421)||(37248920-37248965)
chr5 (377-420)||(556621-556665)
chr5 (377-420)||(29168098-29168142)
chr5 (377-420)||(37652955-37652999)
chr5 (377-420)||(41996591-41996635)
[»] chr1 (66 HSPs)
chr1 (11-357)||(19798785-19799133)
chr1 (11-357)||(40165955-40166303)
chr1 (11-357)||(26927494-26927842)
chr1 (69-357)||(33301010-33301300)
chr1 (16-345)||(39588144-39588475)
chr1 (58-467)||(51041282-51041677)
chr1 (11-420)||(16035528-16035930)
chr1 (16-357)||(38620668-38621010)
chr1 (17-357)||(10140064-10140409)
chr1 (66-357)||(23192645-23192937)
chr1 (11-263)||(25843827-25844079)
chr1 (42-342)||(47451029-47451330)
chr1 (136-471)||(16649510-16649832)
chr1 (82-282)||(8137990-8138191)
chr1 (153-357)||(10135431-10135637)
chr1 (66-348)||(18784389-18784659)
chr1 (66-253)||(28434401-28434588)
chr1 (102-365)||(11806326-11806591)
chr1 (66-366)||(12259962-12260257)
chr1 (66-285)||(16833532-16833752)
chr1 (66-231)||(3094191-3094351)
chr1 (206-357)||(47455353-47455506)
chr1 (233-363)||(8900223-8900355)
chr1 (263-357)||(3094089-3094184)
chr1 (275-471)||(25855046-25855229)
chr1 (66-178)||(41097785-41097892)
chr1 (66-182)||(8267663-8267774)
chr1 (238-336)||(10106100-10106199)
chr1 (239-336)||(13890810-13890908)
chr1 (66-182)||(33055189-33055300)
chr1 (239-336)||(26651166-26651264)
chr1 (239-336)||(38734272-38734370)
chr1 (11-110)||(16649409-16649508)
chr1 (239-336)||(39747165-39747263)
chr1 (239-333)||(5724979-5725074)
chr1 (239-333)||(34318224-34318319)
chr1 (239-333)||(36684715-36684810)
chr1 (273-342)||(4632961-4633031)
chr1 (239-336)||(5602425-5602523)
chr1 (197-343)||(5346652-5346800)
chr1 (388-471)||(10139964-10140048)
chr1 (239-333)||(3584601-3584696)
chr1 (239-333)||(11251113-11251208)
chr1 (80-301)||(25779155-25779380)
chr1 (239-333)||(37404416-37404511)
chr1 (273-342)||(19422913-19422982)
chr1 (18-86)||(11806585-11806653)
chr1 (266-333)||(5730105-5730172)
chr1 (266-333)||(27716443-27716510)
chr1 (266-333)||(37409565-37409632)
chr1 (238-318)||(2493817-2493898)
chr1 (239-336)||(14582096-14582194)
chr1 (377-430)||(47451350-47451404)
chr1 (239-318)||(12906169-12906248)
chr1 (300-357)||(16832076-16832133)
chr1 (274-314)||(25661858-25661899)
chr1 (274-318)||(36724723-36724768)
chr1 (266-333)||(11387858-11387925)
chr1 (66-97)||(25779082-25779113)
chr1 (323-357)||(25843787-25843821)
chr1 (377-425)||(33301305-33301354)
chr1 (11-80)||(39200538-39200607)
chr1 (377-421)||(47455511-47455556)
chr1 (239-311)||(48246683-48246756)
chr1 (377-420)||(25843738-25843782)
chr1 (266-318)||(27711319-27711371)
[»] scaffold0352 (2 HSPs)
scaffold0352 (11-357)||(7079-7427)
scaffold0352 (377-425)||(7025-7074)
[»] chr8 (74 HSPs)
chr8 (11-357)||(44925696-44926043)
chr8 (11-357)||(33416522-33416869)
chr8 (11-357)||(36683554-36683902)
chr8 (11-357)||(19166609-19166957)
chr8 (16-357)||(1910746-1911089)
chr8 (11-361)||(23548402-23548756)
chr8 (69-366)||(24090593-24090887)
chr8 (66-348)||(40125713-40125996)
chr8 (11-466)||(2965500-2965953)
chr8 (66-357)||(17025910-17026203)
chr8 (66-357)||(17556402-17556695)
chr8 (66-357)||(31449698-31449986)
chr8 (113-584)||(34118230-34118687)
chr8 (11-554)||(38182028-38182538)
chr8 (125-353)||(18876253-18876482)
chr8 (136-357)||(1807447-1807671)
chr8 (17-263)||(15951333-15951579)
chr8 (11-357)||(28559438-28559774)
chr8 (11-343)||(28564593-28564927)
chr8 (11-343)||(28572216-28572550)
chr8 (167-356)||(17953800-17953992)
chr8 (11-202)||(17020470-17020661)
chr8 (11-202)||(17550907-17551098)
chr8 (167-348)||(15875596-15875779)
chr8 (66-231)||(4238173-4238333)
chr8 (66-231)||(4242912-4243072)
chr8 (66-262)||(43302520-43302714)
chr8 (263-471)||(4238340-4238536)
chr8 (66-182)||(25367813-25367924)
chr8 (50-182)||(34818516-34818643)
chr8 (11-361)||(24673106-24673449)
chr8 (66-182)||(8331190-8331301)
chr8 (66-182)||(37771862-37771973)
chr8 (274-357)||(40130722-40130806)
chr8 (263-357)||(4243079-4243174)
chr8 (389-581)||(40126000-40126192)
chr8 (239-334)||(33616727-33616823)
chr8 (239-336)||(19430011-19430109)
chr8 (239-336)||(19435513-19435611)
chr8 (239-336)||(19566160-19566258)
chr8 (239-336)||(19571662-19571760)
chr8 (239-336)||(31030525-31030623)
chr8 (238-357)||(2355458-2355579)
chr8 (16-108)||(18876166-18876258)
chr8 (59-166)||(26779268-26779373)
chr8 (239-333)||(32015700-32015795)
chr8 (237-348)||(43302716-43302830)
chr8 (201-285)||(12820387-12820472)
chr8 (241-333)||(24884712-24884805)
chr8 (168-334)||(7902561-7902729)
chr8 (239-333)||(17955789-17955884)
chr8 (66-152)||(12820504-12820590)
chr8 (377-471)||(17025811-17025905)
chr8 (377-471)||(17556303-17556397)
chr8 (239-329)||(21644081-21644172)
chr8 (239-333)||(42514374-42514469)
chr8 (284-342)||(13584341-13584399)
chr8 (292-365)||(13149701-13149773)
chr8 (263-342)||(19954262-19954342)
chr8 (239-353)||(29220245-29220359)
chr8 (263-318)||(2469989-2470044)
chr8 (61-109)||(15875506-15875554)
chr8 (377-420)||(40130811-40130855)
chr8 (266-342)||(43999258-43999334)
chr8 (67-173)||(7001849-7001956)
chr8 (11-157)||(22714779-22714926)
chr8 (34-96)||(1807685-1807747)
chr8 (294-352)||(5883979-5884036)
chr8 (173-231)||(10933534-10933592)
chr8 (324-357)||(19915122-19915155)
chr8 (377-421)||(33416472-33416517)
chr8 (377-420)||(1911094-1911138)
chr8 (61-97)||(29220583-29220619)
chr8 (377-420)||(31449991-31450035)
[»] chr7 (68 HSPs)
chr7 (11-521)||(8268119-8268617)
chr7 (11-357)||(44422909-44423257)
chr7 (11-357)||(4930208-4930556)
chr7 (11-348)||(27238226-27238565)
chr7 (11-471)||(10388140-10388596)
chr7 (16-357)||(13314014-13314356)
chr7 (30-285)||(12799458-12799714)
chr7 (11-481)||(21671049-21671518)
chr7 (11-357)||(26341174-26341528)
chr7 (66-357)||(44510504-44510797)
chr7 (14-261)||(30258173-30258420)
chr7 (78-366)||(3357470-3357761)
chr7 (11-210)||(3045679-3045878)
chr7 (32-309)||(13142694-13142973)
chr7 (90-365)||(12254046-12254322)
chr7 (11-251)||(42626363-42626603)
chr7 (66-348)||(4579492-4579780)
chr7 (66-355)||(9650796-9651085)
chr7 (66-335)||(23866065-23866330)
chr7 (68-420)||(26286975-26287339)
chr7 (66-345)||(3879983-3880263)
chr7 (114-348)||(25543237-25543473)
chr7 (124-356)||(23246814-23247052)
chr7 (66-357)||(8076025-8076307)
chr7 (66-348)||(16372382-16372665)
chr7 (150-353)||(9008142-9008346)
chr7 (71-318)||(3284741-3284991)
chr7 (180-366)||(29150900-29151088)
chr7 (78-308)||(6590818-6591054)
chr7 (61-253)||(23318067-23318257)
chr7 (66-182)||(40865186-40865297)
chr7 (66-182)||(19640449-19640560)
chr7 (66-182)||(27256393-27256504)
chr7 (239-336)||(24528351-24528449)
chr7 (263-357)||(42627222-42627318)
chr7 (17-143)||(15642368-15642495)
chr7 (377-523)||(30256679-30256824)
chr7 (411-585)||(19640023-19640193)
chr7 (238-336)||(9973459-9973558)
chr7 (197-366)||(15642200-15642371)
chr7 (239-333)||(33238002-33238097)
chr7 (239-333)||(47998975-47999070)
chr7 (265-357)||(30256829-30256922)
chr7 (239-333)||(2234630-2234725)
chr7 (239-333)||(16539412-16539507)
chr7 (239-333)||(16626155-16626250)
chr7 (266-333)||(32212682-32212749)
chr7 (239-333)||(33243179-33243274)
chr7 (239-333)||(42571945-42572040)
chr7 (239-333)||(47993800-47993895)
chr7 (377-450)||(13314361-13314435)
chr7 (11-100)||(3356868-3356957)
chr7 (239-331)||(33226416-33226509)
chr7 (196-244)||(45748599-45748647)
chr7 (242-336)||(28292506-28292600)
chr7 (266-333)||(47177147-47177214)
chr7 (66-97)||(10498380-10498411)
chr7 (66-97)||(10503409-10503440)
chr7 (239-333)||(12934397-12934492)
chr7 (266-333)||(17495403-17495470)
chr7 (266-333)||(17557744-17557811)
chr7 (278-333)||(21081081-21081136)
chr7 (239-333)||(43892858-43892953)
chr7 (66-107)||(9008377-9008418)
chr7 (276-341)||(23317989-23318053)
chr7 (263-318)||(1289358-1289413)
chr7 (263-318)||(6898381-6898436)
chr7 (239-318)||(19309611-19309691)
[»] chr6 (68 HSPs)
chr6 (11-357)||(6407633-6407980)
chr6 (13-357)||(12688946-12689292)
chr6 (11-357)||(11570521-11570869)
chr6 (11-312)||(17964331-17964634)
chr6 (11-357)||(2699879-2700226)
chr6 (17-363)||(29892039-29892387)
chr6 (11-363)||(12406125-12406479)
chr6 (66-357)||(33687430-33687723)
chr6 (27-263)||(11534499-11534735)
chr6 (11-312)||(16835932-16836231)
chr6 (27-263)||(11560009-11560245)
chr6 (11-219)||(11428124-11428332)
chr6 (11-274)||(19995175-19995439)
chr6 (66-348)||(8747766-8748045)
chr6 (11-254)||(4157141-4157384)
chr6 (73-357)||(14508959-14509245)
chr6 (11-175)||(25314229-25314393)
chr6 (11-175)||(26201723-26201887)
chr6 (92-361)||(24589022-24589288)
chr6 (124-359)||(20748169-20748406)
chr6 (107-357)||(21309006-21309241)
chr6 (11-187)||(5856155-5856330)
chr6 (169-357)||(25316494-25316686)
chr6 (169-357)||(26203988-26204180)
chr6 (178-366)||(13736617-13736807)
chr6 (42-177)||(11613568-11613705)
chr6 (182-366)||(11614035-11614221)
chr6 (66-261)||(22609641-22609837)
chr6 (154-356)||(9751724-9751928)
chr6 (50-163)||(17913768-17913881)
chr6 (61-263)||(15991560-15991764)
chr6 (61-263)||(15999222-15999426)
chr6 (263-353)||(19674292-19674383)
chr6 (239-336)||(19478145-19478243)
chr6 (194-346)||(22695226-22695380)
chr6 (269-353)||(11428022-11428108)
chr6 (239-336)||(13605092-13605190)
chr6 (239-333)||(21396699-21396794)
chr6 (239-333)||(22698243-22698338)
chr6 (239-333)||(31981560-31981655)
chr6 (239-333)||(34142080-34142175)
chr6 (239-333)||(34154696-34154791)
chr6 (303-348)||(2882821-2882866)
chr6 (241-336)||(3901909-3902006)
chr6 (239-333)||(29491237-29491332)
chr6 (299-357)||(11534740-11534798)
chr6 (299-357)||(11560250-11560308)
chr6 (284-337)||(12183047-12183100)
chr6 (217-361)||(2760233-2760366)
chr6 (239-336)||(10642706-10642805)
chr6 (239-333)||(24191383-24191478)
chr6 (239-333)||(24192480-24192575)
chr6 (11-101)||(22695095-22695185)
chr6 (303-348)||(2863518-2863563)
chr6 (66-182)||(6112788-6112898)
chr6 (377-420)||(6407985-6408029)
chr6 (325-357)||(19995439-19995471)
chr6 (266-333)||(21401755-21401822)
chr6 (239-333)||(22703366-22703461)
chr6 (286-336)||(17281612-17281662)
chr6 (303-353)||(17729086-17729136)
chr6 (125-159)||(22695165-22695199)
chr6 (222-318)||(35129643-35129739)
chr6 (377-417)||(17964655-17964696)
chr6 (61-97)||(2863288-2863324)
chr6 (61-97)||(2882592-2882628)
chr6 (377-420)||(8747708-8747752)
chr6 (239-313)||(32815063-32815138)
[»] chr2 (56 HSPs)
chr2 (11-357)||(1934765-1935113)
chr2 (11-357)||(25497098-25497445)
chr2 (11-474)||(9180500-9180947)
chr2 (16-585)||(25478075-25478627)
chr2 (11-357)||(12796900-12797248)
chr2 (66-581)||(30650695-30651196)
chr2 (11-357)||(19892240-19892586)
chr2 (11-357)||(9189579-9189923)
chr2 (11-357)||(31326714-31327072)
chr2 (11-420)||(40847371-40847779)
chr2 (11-357)||(28603273-28603626)
chr2 (66-357)||(29677742-29678035)
chr2 (11-365)||(17545071-17545427)
chr2 (11-357)||(18344406-18344745)
chr2 (70-357)||(7737682-7737971)
chr2 (66-357)||(10160557-10160844)
chr2 (161-357)||(29677356-29677554)
chr2 (137-357)||(30658238-30658460)
chr2 (74-357)||(35601897-35602177)
chr2 (124-366)||(19578300-19578543)
chr2 (124-366)||(21523610-21523848)
chr2 (124-356)||(19094375-19094614)
chr2 (194-357)||(42926714-42926881)
chr2 (137-357)||(30631554-30631780)
chr2 (199-357)||(35638957-35639117)
chr2 (66-224)||(17453414-17453564)
chr2 (66-182)||(6297719-6297830)
chr2 (66-182)||(28855156-28855266)
chr2 (239-336)||(42914639-42914737)
chr2 (263-359)||(20711418-20711515)
chr2 (239-334)||(5089277-5089373)
chr2 (66-182)||(19538536-19538647)
chr2 (239-333)||(42723451-42723546)
chr2 (239-333)||(42728620-42728715)
chr2 (239-333)||(44096302-44096397)
chr2 (239-333)||(44754596-44754691)
chr2 (239-333)||(44759762-44759857)
chr2 (377-469)||(10160849-10160942)
chr2 (239-333)||(40518472-40518567)
chr2 (167-253)||(32079460-32079546)
chr2 (377-420)||(29677694-29677737)
chr2 (66-109)||(30643408-30643451)
chr2 (239-312)||(40392340-40392414)
chr2 (380-468)||(30658141-30658230)
chr2 (239-314)||(44957437-44957513)
chr2 (263-342)||(160031-160111)
chr2 (377-420)||(9189928-9189972)
chr2 (321-357)||(15489798-15489834)
chr2 (377-420)||(19892591-19892635)
chr2 (496-611)||(30655360-30655473)
chr2 (153-239)||(13291455-13291540)
chr2 (268-333)||(28751759-28751824)
chr2 (69-110)||(30629074-30629115)
chr2 (380-420)||(30631505-30631546)
chr2 (86-152)||(38591447-38591515)
chr2 (377-420)||(18344357-18344401)
[»] scaffold0182 (2 HSPs)
scaffold0182 (66-357)||(9714-10007)
scaffold0182 (377-420)||(10012-10056)
[»] scaffold0002 (5 HSPs)
scaffold0002 (66-357)||(4049-4341)
scaffold0002 (11-305)||(443718-444011)
scaffold0002 (377-421)||(3999-4044)
scaffold0002 (61-97)||(150729-150765)
scaffold0002 (61-97)||(139989-140025)
[»] scaffold0045 (1 HSPs)
scaffold0045 (66-583)||(82830-83326)
[»] scaffold0240 (1 HSPs)
scaffold0240 (66-523)||(3802-4241)
[»] scaffold0054 (3 HSPs)
scaffold0054 (122-357)||(25374-25611)
scaffold0054 (16-263)||(29226-29481)
scaffold0054 (11-140)||(25637-25766)
[»] scaffold2020 (1 HSPs)
scaffold2020 (144-422)||(281-567)
[»] scaffold0009 (2 HSPs)
scaffold0009 (144-422)||(164928-165214)
scaffold0009 (32-149)||(148198-148316)
[»] scaffold0057 (1 HSPs)
scaffold0057 (182-348)||(35618-35786)
[»] scaffold0008 (1 HSPs)
scaffold0008 (168-366)||(255783-255983)
[»] scaffold0690 (1 HSPs)
scaffold0690 (11-214)||(5410-5608)
[»] scaffold0012 (2 HSPs)
scaffold0012 (150-355)||(165998-166204)
scaffold0012 (377-423)||(166211-166259)
[»] scaffold0061 (1 HSPs)
scaffold0061 (66-182)||(45935-46046)
[»] scaffold0017 (1 HSPs)
scaffold0017 (66-182)||(152741-152852)
[»] scaffold0128 (1 HSPs)
scaffold0128 (144-312)||(13292-13460)
[»] scaffold0011 (4 HSPs)
scaffold0011 (66-211)||(146257-146406)
scaffold0011 (239-336)||(1562-1660)
scaffold0011 (239-336)||(7043-7141)
scaffold0011 (207-263)||(155486-155542)
[»] scaffold1050 (1 HSPs)
scaffold1050 (164-285)||(1188-1309)
[»] scaffold0060 (3 HSPs)
scaffold0060 (68-182)||(47692-47801)
scaffold0060 (66-182)||(52733-52844)
scaffold0060 (239-342)||(37001-37105)
[»] scaffold0132 (2 HSPs)
scaffold0132 (239-336)||(2772-2870)
scaffold0132 (239-336)||(10732-10830)
[»] scaffold0184 (1 HSPs)
scaffold0184 (120-348)||(2293-2526)
[»] scaffold0097 (1 HSPs)
scaffold0097 (263-359)||(15257-15354)
[»] scaffold0055 (1 HSPs)
scaffold0055 (239-333)||(3058-3153)
[»] scaffold0052 (1 HSPs)
scaffold0052 (239-333)||(81382-81477)
[»] scaffold0020 (1 HSPs)
scaffold0020 (95-182)||(1088-1170)
[»] scaffold0166 (2 HSPs)
scaffold0166 (266-342)||(19226-19302)
scaffold0166 (239-333)||(13740-13835)
[»] scaffold0594 (1 HSPs)
scaffold0594 (239-333)||(9208-9303)
[»] scaffold0014 (2 HSPs)
scaffold0014 (239-333)||(31545-31640)
scaffold0014 (239-318)||(26388-26468)
[»] scaffold0517 (1 HSPs)
scaffold0517 (266-333)||(3563-3630)
[»] scaffold0067 (1 HSPs)
scaffold0067 (287-336)||(34018-34067)
[»] scaffold0037 (1 HSPs)
scaffold0037 (42-146)||(42138-42243)
[»] scaffold0330 (1 HSPs)
scaffold0330 (439-523)||(19784-19867)
[»] scaffold0018 (1 HSPs)
scaffold0018 (263-318)||(171740-171795)


Alignment Details
Target: chr3 (Bit Score: 271; Significance: 1e-151; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 11 - 584
Target Start/End: Original strand, 7570990 - 7571549
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| || ||||||  ||||||||||||||||||||||||||||||||||    
T  7570990 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttataatggtattaacaccatatttgagtggtctcagcaccataac 7571089  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  7571090 agagtggtaacaataccatattaaagtggtttcagtattaaagcgtggtcttagtaccatatttggaggtgtaattctcgaacggttttctacagtgcag 7571189  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg-gtgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||  |||||||||| ||||||||| |||||| |||||||| ||||||||||    
T  7571190 tagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctta 7571289  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aa 407  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||||| |                 |||||||||| |||||||||||||||||| ||    
T  7571290 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataat---------------agaatttggaaatccaaatacaacagtttggaaa 7571374  T
Q  408 tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattttgttgtaccaaaattaaaacaaggataaatca 507  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||| ||||||||| || ||  ||||| || ||| || |  ||||||||||||    
T  7571375 tccaaaaacaacaattttaagacgtttcgatctgctatgtctaccgaagaagttacttattaaggttcagttgttcctaaa-tacattaaggataaatca 7571473  T
Q  508 ggctataaaaatacatattttggactgatataatgaagtgattgttgttataacaacgacaataagagattcacata 584  Q
     |||||| ||||||||| ||| |||||| | ||||||| | |||||||||||||||| ||| ||||| |||||||||    
T  7571474 agctatagaaatacata-tttagactgaaacaatgaagagtttgttgttataacaacaacattaagaaattcacata 7571549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 758140 - 758488
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  758140 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtgttaacaccatatttgagtggtctcagcaccataac 758239  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  758240 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcag 758339  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||||||||| || ||  |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  758340 tagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtctta 758439  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  758440 aagagagcgatctggtcgtgactcaacctagtaacaacttcggtagata 758488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 23665895 - 23666243
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| | || |||| |||| |||||| |||||| ||||||||| |||||||||   |||||||||||||||||||||||||||| ||||    
T  23665895 atcaccatatttgagtgatcgtagtaccatattgatagtttggagaacttaaagttagaatggtatgaacaccatatttgagtggtctcagcaccttaac 23665994  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  23665995 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcat 23666094  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||||||||| || ||  |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||    
T  23666095 tagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctta 23666194  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  23666195 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 23666243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 24038143 - 24038491
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| | || |||| |||| |||||| |||||| ||||||||| |||||||||   |||||||||||||||||||||||||||| ||||    
T  24038143 atcaccatatttgagtgatcgtagtaccatattgatagtttggagaacttaaagttagaatggtatgaacaccatatttgagtggtctcagcaccttaac 24038242  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  24038243 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcat 24038342  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||||||||| || ||  |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||    
T  24038343 tagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctta 24038442  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  24038443 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 24038491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 20520375 - 20520027
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||||| || |||||| |||||| || |||||| |||||||||||||||||||||||| |||||| |||||||||||||    
T  20520375 atcaccatatttgagtggtcgtagtgcaatattgatactttggagaaattaaagttagaatggtggtaacaccatattttagtggtttcagcaccataac 20520276  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||| |||    
T  20520275 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtactatatttgaaggtgtaaatctcgaacagttttctacagtacag 20520176  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaat-ttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| || |||||||||||| |||||| ||||||| ||||||||| ||||||||||| ||||| |||||||| ||||||||||    
T  20520175 tagttaaccgcacagttgtagctggacttgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtctta 20520076  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||| ||  |||||||||||||||||||||||||||| | ||||||    
T  20520075 aagagagtgacctggtcgtgactcaacctagtaacaacttcgctagata 20520027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 18467546 - 18467198
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  18467546 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtattaacaccatatttgagtggtctcagcaccataac 18467447  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   |||||| ||||||||| |||||||||||||||    
T  18467446 agagtggtaacaataccatattaaaatggtttcagtattaaagagtggtcttagtaccatatttggaagtgtaattctcgaacgattttctacagtgcag 18467347  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || ||| |||||| || ||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| |||||||| ||||||||||    
T  18467346 tagttaatcgaacaattgtagttggacttgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtctta 18467247  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  18467246 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 18467198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 29350561 - 29350213
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||| ||||||| || |||||  ||||||||||| ||||||||||||||||| ||||| ||| |||||    
T  29350561 atcaccatatttgagtggtcgtagtgccatattgatgttttggagaaattaaaattagaatggtggcaacaccatatttgagtgctctcaacactataac 29350462  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29350461 agagtggtaacaatatcatattaaagtgattttagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcag 29350362  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    || |||||| ||||||||||| ||| |||||||||||||||||| ||| |||| ||| ||||||||||||||| |||||| |||||||| ||||||||||    
T  29350361 taattaaccacacagttgtagttgagcttgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtctta 29350262  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  29350261 aagaaagcgacatggtcgtgactcaacctagtaacaacttcggtagata 29350213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 39775500 - 39775848
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||  ||||||||||||||||||||||||||| ||||||    
T  39775500 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtattaacaccatatttgagtggtctcagcatcataac 39775599  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||| | ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||  ||||||| | ||||||| |||||||||||||||    
T  39775600 agagtagtaacaataccatattaaagtggtttcagtagtaaagagttgtcttagtaccatatttggaggtgtaattttcgaacgattttctacagtgcag 39775699  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || |||||||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||    
T  39775700 tagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctta 39775799  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  ||||||||||||||||||||| |||||| ||||||||    
T  39775800 aagagagcgacctggtcgtgactcaacctagtagcaacttcggtagata 39775848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 18472328 - 18471981
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| ||||||| |  ||||||||||||||||||||||||||||||||||    
T  18472328 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatgatattaacaccatatttgagtggtctcagcaccataac 18472229  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||| |||||    
T  18472228 aaagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacaatgcag 18472129  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || |||||||||| ||  |||||||||||||||||| ||||||| |||||||||||||||||||| ||| || ||||||||  ||| || ||    
T  18472128 tagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccac-gaacatcgta 18472030  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  18472029 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 18471981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 34 - 357
Target Start/End: Complemental strand, 3419291 - 3418968
Alignment:
Q  34 gtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatatta 133  Q
    ||||||| ||||||||||||| || |||||| ||||||||||| ||||||||||| |||||||| |||| |||||||| || || |||||||| ||||||    
T  3419291 gtgccatattgatattttggagaaattaaagttagaatggtggcaacaccatatt-gagtggtcacagcgccataacagagcggtaacaatacaatatta 3419193  T
Q  134 aagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagat 233  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| |||||||||||||||||| || |    
T  3419192 aagtggtttcagtattaa-gagtggtcttagtaccatatttgagggtgtaaatctcaaacggttttctacgatgcaatagttaaccgcacagttgcagtt 3419094  T
Q  234 gaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgact 331  Q
    || |||||||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||  |||||||||||    
T  3419093 gagcttgttttatcctgaaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacttggtcgtgact 3418994  T
Q  332 caacctagtaacaactttggtagata 357  Q
    ||||||||||||||||| ||||||||    
T  3418993 caacctagtaacaacttcggtagata 3418968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 14438471 - 14438815
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||  ||||||| || |||||| ||||||||| | || |||||||||||||||||||| |||||||||    
T  14438471 atcaccatatttgagtggtcgtagtgccatattgaagttttggagaaattaaagttagaatggtagcaaaaccatatttgagtggtctcaacaccataac 14438570  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | |||||  |||||||||||     ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14438571 agagtggttacaataccatag----gtggtttcaatattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcag 14438666  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||||||||| || ||  |||||||||||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  14438667 tagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtctta 14438766  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||| ||||  |||||||||||||||||||||||||||| ||||||||    
T  14438767 aagagggcgacctggtcgtgactcaacctagtaacaacttcggtagata 14438815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 16 - 357
Target Start/End: Original strand, 3657017 - 3657360
Alignment:
Q  16 catatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagt 115  Q
    |||||||||| |||| ||||||||| ||||||||||||| || |||||| |||||||||||||||| ||||||||| ||||||||||||| ||||| |||    
T  3657017 catatttgagtggtcgtagtgccatattgatattttggagaaattaaagttagaatggtggtaacatcatatttgattggtctcagcaccgtaacagagt 3657116  T
Q  116 ggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagtt 215  Q
    || ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  3657117 ggtaacaatatcatattaaagtggtttcagcattaaagagtggtcttagtaccatatttaagggtgtaattctcgaacgattttctacagtgcagtagtt 3657216  T
Q  216 aaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagag 313  Q
    || |  |||||||||| || |||||||||||| |||||||||| ||| |||||||||| ||||||||| ||||   |||||||| |||||||||||||||    
T  3657217 aatctaacagttgtagctggacttgttttatcttggaggtggcatggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagag 3657316  T
Q  314 agcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||  |  |||||||||||| |||||||||||| ||||||||    
T  3657317 agcgatctaatcgtgactcaacatagtaacaacttcggtagata 3657360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 11 - 348
Target Start/End: Complemental strand, 55431636 - 55431297
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||| ||| ||||| ||||||| || |||||| ||||||||||  ||||||||||||||||||||||| |||||||||    
T  55431636 atcaccatatttgagtggtcgtagtgtcatattgatgttttggagaaattaaagttagaatggtgacaacaccatatttgagtggtctcaacaccataac 55431537  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||  |||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  55431536 agagtgataacaatgccatattaaggtggtttaagtatcaaagagtggtcttagtaccatatttgagggtgcaattctcgaacagttttctacagtgcag 55431437  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| || ||||||||||||||||||| ||||||| ||||||||||||||||| || ||| |  |||| ||| ||||||||||    
T  55431436 tagttaaccgcacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcataatttttgacagtgtcacgaaacgtctta 55431337  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    ||||||||||  || ||||||||||||||| |||||||||    
T  55431336 aagagagcgacctgatcgtgactcaacctaataacaactt 55431297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 11 - 297
Target Start/End: Original strand, 23661236 - 23661524
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| | || |||| |||| |||||| |||||| ||||||||| |||||||||   |||||||||||||||||||||||||||| ||||    
T  23661236 atcaccatatttgagtgatcgtagtaccatattgatagtttggagaacttaaagttagaatggtatgaacaccatatttgagtggtctcagcaccttaac 23661335  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  23661336 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcat 23661435  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccac 297  Q
    |||||||||||||||||| || ||  |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||    
T  23661436 tagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccac 23661524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 66 - 471
Target Start/End: Complemental strand, 3692879 - 3692491
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| || |||||   |||||  |||||||||||||     ||||||||||||||| || |||||||||    
T  3692879 tagaatggtggtaacaccatatttgagtggtctcaacatcataattgagtggttacaataccatatt-----ggtttcagtattaaaagattggtcttag 3692785  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||| || |||||||||| ||  |||||||||||||||||| ||||||| |    
T  3692784 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggtt 3692686  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctt 362  Q
    ||||||||||||||||||| |||||| |||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| |       
T  3692685 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataat--- 3692589  T
Q  363 tttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaatt 461  Q
                  |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||  |||||| |||||| ||    
T  3692588 ------------agaatttggaaatccaaatacaacagtttggaaatccaaaaacaacaattttaagacgtttcgatctgctgcgtctaccgaagaagtt 3692501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 66 - 471
Target Start/End: Complemental strand, 8888191 - 8887803
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   |||||  |||||||||||||     ||||||||||||||| || |||||||||    
T  8888191 tagaatggtggtaacaccatatttgagtggtctcaacaccataattgagtggttacaataccatatt-----ggtttcagtattaaaagattggtcttag 8888097  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| |||||||||||||||||||||| |||||||||||||||||||| || || | ||||||||||||||||| ||||||| |    
T  8888096 taccatatt-gaaggtgtaattctcgaacggttttctacagtgtagtagttaaccgcacagttgcagctggatttgttttatcctggaggcggcgtggtt 8887998  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctt 362  Q
    |||| |||| ||||||||| |||||  ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| |       
T  8887997 gataatctgtcttgcacaattttggacagtgcaacaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataat--- 8887901  T
Q  363 tttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaatt 461  Q
                  ||||||||||  ||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||  |||||| ||    
T  8887900 ------------agaatttggaaattcaaatacaacagtttggaaatccaaaatcaacaattttaagacgtttcgatctgctatgtctatcgaagaagtt 8887813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 8069940 - 8069653
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   |||||  |||||||||||||     ||||||||| ||||| || |||||||||    
T  8069940 tagaatggtggtaacaccatatttgagtggtctcaacaccataattgagtggttacaataccatatt-----ggtttcagtgttaaaagattggtcttag 8069846  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt- 263  Q
    ||||||||| || ||||||| |||||||||||| |||||||||||||||||||||||||||||| || ||  |||||||||||||||||| ||||||||     
T  8069845 taccatatt-gaaggtgtaattctcgaacggttatctacagtgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggtt 8069747  T
Q  264 gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||| ||||||||||||||  |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  8069746 gatagtctgtcttgcacaatttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 8069653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 50 - 285
Target Start/End: Complemental strand, 46964297 - 46964061
Alignment:
Q  50 ttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt 149  Q
    ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  46964297 ttggataaattaaagttagaatggtggtaacaccatatttgagtggtctcagcaccataacagagtggtaacaataccatatcaaagtggtttcagtatt 46964198  T
Q  150 aaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcct 249  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || |||||||  |||  ||||||||||||    
T  46964197 aaagagtggtcttaataccatatttgagggtgtaaatctcgaacggttttctatagtgcaatagttaaccacatagttgtatctgagtttgttttatcct 46964098  T
Q  250 ggaggtggcgt-ggtgatagtctgccttgcacaattt 285  Q
     |||||||| | ||||||||||||| |||||||||||    
T  46964097 agaggtggcatgggtgatagtctgcattgcacaattt 46964061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 3672847 - 3672559
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| || |||||   |||||  |||||||||||||     ||||||||||||||| || |||||||||    
T  3672847 tagaatggtggtaacaccatatttgagtggtctcaacatcataattgagtggttacaataccatatt-----ggtttcagtattaaaagattggtcttag 3672753  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||| || |||||||||| ||  |||||||||||||||||| ||||||| |    
T  3672752 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggtt 3672654  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||||| |||||| |||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  3672653 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 3672559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 2207521 - 2207757
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    ||||||||||||||| |||| ||||||||| ||||| ||||| | || |||||| ||||| ||||| ||||||||||||||||||||||| ||||||||     
T  2207521 atcatcatatttgagtggtcgtagtgccatattgatgttttgaagaaattaaagttagaacggtggcaacaccatatttgagtggtctcaacaccataat 2207620  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||    
T  2207621 agagtggtaacaataccatataaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaagggttttctacagtacag 2207720  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatc 247  Q
    |||||||||||||| |||||||||  |||||||||||    
T  2207721 tagttaaccgcacaattgtagatgggcttgttttatc 2207757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 66 - 520
Target Start/End: Original strand, 12965700 - 12966140
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttag 164  Q
    |||||||||||||||||||||||||||| |||||||  |||||| | ||||| || | |||||||||||||||||||||||||| ||||| ||||||| |    
T  12965700 tagaatggtggtaacaccatatttgagttgtctcagttccataatagagtggtaatattaccatattaaagtggtttcagtattaaaagaatggtcttgg 12965799  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| ||| |||| ||||||||||||||| ||||||| || ||| |||||| || ||||||||||||||||||| ||||||| |    
T  12965800 taccatattgga-ggtgtaattcttgaacagttttctacagtgcattagttaatcgaacaattgtagttggacttgttttatcctggaggcggcgtggtt 12965898  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctt 362  Q
    ||||||||| ||||||||| |||||| ||||||| |||||||||||||||||||||  |||| ||||||||| ||||||||||||| |||||||  |       
T  12965899 gatagtctgtcttgcacaattttgggcagtgccataaaacgtcttaaagagagcgacctggttgtgactcaatctagtaacaacttcggtagatcat--- 12965995  T
Q  363 tttcnnnnnnnnttaatttggaaagccaaatacaacagtttg-gaatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaatt 461  Q
                  |||||||||| ||||||||||| |||||  ||| ||||||||| | ||||||||| |||||| ||||||||||||| |||||||||    
T  12965996 ------------agaatttggaaacccaaatacaacggtttgaaaattcaaaaacaataattttaagacgtttcga-ctgctatgtctaccgaagaaatt 12966082  T
Q  462 acttattgagattttgttgtaccaaaattaaaacaaggataaatcaggctataaaaata 520  Q
    |||||||||| ||| ||||| || |||  |||| |||||| |||||| ||||| |||||    
T  12966083 acttattgaggtttcgttgtccctaaa-caaaataaggatgaatcagactatagaaata 12966140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 11 - 307
Target Start/End: Complemental strand, 27709253 - 27708959
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||| ||||||| || |||||| |||||||||||||||||||||||||||||||| || ||||||||     
T  27709253 atcaccatatttgagtggtcgtagtgccatattgatgttttggagaaattaaagttagaatggtggtaacaccatatttgagtggtcgcaacaccataat 27709154  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | |||||  ||||||| |||     |||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27709153 agagtggttacaatactatag----gtggtttcagtattgaagagtgatcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcag 27709058  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctt 307  Q
    |||||||||||||||||| || ||  |||||||||||||||||| ||||||| ||||||||| ||||||| || |||||| |||||||  |||||||||    
T  27709057 tagttaaccgcacagttgaagctgggcttgttttatcctggaggcggcgtggttgatagtctaccttgcataattttgggcagtgccatgaaacgtctt 27708959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 134 - 357
Target Start/End: Original strand, 49971319 - 49971544
Alignment:
Q  134 aagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagat 233  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||| || |    
T  49971319 aagtggtttcagtattaaagagtggtctcagtaccatatttgagggtgtaattctcgaacggttttctacagtgaagtagttaactgcacagttgcagct 49971418  T
Q  234 gaacttgttttatcctggaggtggcgtg-gtgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgact 331  Q
    | ||||||||||||||||||| ||||||  |||||||||||||||||||| ||||| ||||||||| |||||||||||||||| |||  |||||||||||    
T  49971419 ggacttgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagagatcgacctggtcgtgact 49971518  T
Q  332 caacctagtaacaactttggtagata 357  Q
    ||||||||||||||||| ||||||||    
T  49971519 caacctagtaacaacttcggtagata 49971544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 77 - 357
Target Start/End: Original strand, 32474517 - 32474798
Alignment:
Q  77 taacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtc-ttagtaccatatttg 175  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||     
T  32474517 taacaccatatttgagtggtctcagcaccataatagagtggtaacaatatcatattaaagtggtttcagtattaaagagtggtctttagtaccatattta 32474616  T
Q  176 agggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgcc 274  Q
      ||| ||| ||||||||| |||||||||||||||||||||| || |||||||||| ||  |||||||||||||||||  ||||||| |||||||||| |    
T  32474617 gaggtataattctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggagacggcgtggttgatagtctgtc 32474716  T
Q  275 ttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||| |||||| |||||||| |||||||||  |||||||||  |||||||| ||||| ||||||||||||| ||||||||    
T  32474717 ttgcacaattttgggcagtgccacgaaacgtctt--agagagcgacctggtcgtggctcaatctagtaacaacttcggtagata 32474798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 11 - 261
Target Start/End: Complemental strand, 55326097 - 55325847
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  55326097 atcaccatatttgagtggtcgtagtgccatattgatgttttggaaaaattaaagttagaatggtggtaacaccatatttgagtggtctcaacaccataac 55325998  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaac-ggttttctacagtgca 209  Q
    | | ||  ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||| | ||||||||||||||||    
T  55325997 agaatgataacaatatcatattaaagtggtttcagtattaaagagtggtcttagtaccgtatttaagggtgtaattctcgatcgggttttctacagtgca 55325898  T
Q  210 gtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg 261  Q
     ||||||||||||||||||||  ||  |||||||||||||||||| ||||||    
T  55325897 -tagttaaccgcacagttgtaactgggcttgttttatcctggaggcggcgtg 55325847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 3033905 - 3033617
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| || |||||   |||||  |||||||||||||     ||||||||||||||| || || ||||||    
T  3033905 tagaatggtggtaacaccatatttgagtggtctcaacatcataattgagtggttacaataccatatt-----ggtttcagtattaaaagattgatcttag 3033811  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||| || |||||||||| ||| ||||||||||||| |||| || |||| |    
T  3033810 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgagcttgttttatccttgaggcggtgtggtt 3033712  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||||| |||||| |||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  3033711 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 3033617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 8883431 - 8883143
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaag-agtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   |||||  |||||||||||||     |||||||||||||||  | ||||||| |    
T  8883431 tagaatggtggtaacaccatatttgagtggtctcaacaccataattgagtggttacaataccatatt-----ggtttcagtattaaaatattggtctttg 8883337  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||||  |||||| |    
T  8883336 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcagcgtggtt 8883238  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||||||    
T  8883237 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcgacctagtaacaacttcggtagata 8883143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 11 - 366
Target Start/End: Original strand, 25726562 - 25726921
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagct-agaatggtggtaacaccatatttgagtggtctcagcaccataa 109  Q
    |||| |||||||||  |||| |||| |||| ||||||||||||| ||||||||| | |||||| || |||||||||||||||||||||| | ||||||||    
T  25726562 atcaccatatttgaatggtcgtagtaccatattgatattttggagaacttaaaggttagaatgatgataacaccatatttgagtggtcttaacaccataa 25726661  T
Q  110 caaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgca 209  Q
     |  ||||  |||||||||||||| | || |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  25726662 ta--gtggtcacaataccatattagaatgatttcagtatttaagagtggtcttagtaccatattggagg-tgtaaatctcgaacggttttctacagtgca 25726758  T
Q  210 gtagttaaccgcacagttgtagatgaacttgtt--ttatcctggaggtggcgtgg-----tgatagtctgccttgcacaatt-tgggtagtgccacaaaa 301  Q
    |||||||||||||||||||||  || |||||||  |  |||| |||| |||||||     |||||| |||  |||||||||| ||||||||||| | |||    
T  25726759 gtagttaaccgcacagttgtaactgcacttgtttatcctcctagaggcggcgtggttggttgatagcctg-attgcacaattctgggtagtgccgcgaaa 25726857  T
Q  302 cgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttc 366  Q
    |||||||||||||||||  |||||||||||||| ||||| |||||||||||| ||||||||||||    
T  25726858 cgtcttaaagagagcgacctggtcgtgactcaatctagt-acaactttggtatatattctttttc 25726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 66 - 348
Target Start/End: Original strand, 12971460 - 12971744
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttag 164  Q
    |||||| || |||| || |||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||| |||||| ||||| | ||||| |    
T  12971460 tagaatagtagtaagacaatatttgagtggtctcagcaccataatagagtggtaacagtaccatattaaagtggttttagtattaaaagattagtcttgg 12971559  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg-gt 263  Q
    ||||||||| || ||||||| ||||||||||||||||||| ||||||||||||  | |||||||||| ||  ||||||||||||| |||| ||||||  |    
T  12971560 taccatattgga-ggtgtaattctcgaacggttttctacaatgcagtagttaattgaacagttgtagttgggcttgttttatcctagaggcggcgtgatt 12971658  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    |||| |||| ||||||||| |||||| | |||||| ||||||||||||||||| ||  ||||||||| ||||||||||||||||||    
T  12971659 gataatctgtcttgcacaattttgggcaatgccacgaaacgtcttaaagagagagacctggtcgtgagtcaacctagtaacaactt 12971744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 131 - 481
Target Start/End: Original strand, 12112533 - 12112883
Alignment:
Q  131 ttaaagtggtttcagtattaaa-gagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgt 229  Q
    |||||||||||| ||||||||| || | ||||| | |||||||| |||| ||||||||||||| |||||||||||||| || |||||||| | || ||||    
T  12112533 ttaaagtggtttaagtattaaaagaatagtctttgcaccatattggagg-tgtaaatctcgaatggttttctacagtgtagcagttaaccacccatttgt 12112631  T
Q  230 agatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgt 327  Q
    || ||| |||||||||||||||||| || ||||| ||||||||| ||||||||| |||||  |||||||| ||||||||||||||||||||  | |||||    
T  12112632 agttgagcttgttttatcctggaggcggtgtggttgatagtctgtcttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctagtcgt 12112731  T
Q  328 gactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttg-gaatccaaaaacaacagtttta 426  Q
    || |||||||||||||||||| ||||||||||| ||||           |||||| ||| ||||||||||| |||||  |||| |||||||||| |||||    
T  12112732 gattcaacctagtaacaacttcggtagatattcctttttaaaatag---aatttgaaaatccaaatacaacggtttgtaaatcaaaaaacaacaatttta 12112828  T
Q  427 agacatttcgatctgctatgtctacagaagaaattacttattgagattttgttgt 481  Q
    |||| ||||   |||||||||||||  ||||| ||||| |||||| ||| |||||    
T  12112829 agacgtttcagactgctatgtctaccaaagaatttactcattgaggtttcgttgt 12112883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 66 - 263
Target Start/End: Original strand, 6596189 - 6596381
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | |||||  |||  ||||||||     ||||||||||||||| ||||||||||||    
T  6596189 tagaatggtggtaacacaatatttgagtggtctcagcaccataatagagtggtcacagcaccatatt-----ggtttcagtattaaaagagtggtcttag 6596283  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt 263  Q
    ||||||||| || ||||||| ||||||||||||||||||| |||||||||||||| || | |||||| ||| |||||||||||||||||| ||||||||    
T  6596284 taccatatt-gaaggtgtaattctcgaacggttttctacaatgcagtagttaaccacataattgtagctgagcttgttttatcctggaggcggcgtggt 6596381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 376 - 612
Target Start/End: Original strand, 6606781 - 6607016
Alignment:
Q  376 taatttggaaagccaaa-tacaacagtttgg-aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagat 473  Q
    ||||||||||| ||||| |||| |||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||||||| |    
T  6606781 taatttggaaaaccaaaatacatcagtttgggaatccaaaaacaacaattttaagacgtttcga-ctgctatgtctaccgaagaaattacttattgaggt 6606879  T
Q  474 tttgttgtaccaaaattaaaacaaggataaatcaggctataaaaatacatattttggactgatataatgaagtgattgttgttataacaacgacaataa- 572  Q
    || ||||| || ||| || |||| |||||||||| |||||  |||||||||||||  ||||| | ||||||||| |||||||||||||||| ||| |||     
T  6606880 ttcgttgtccctaaa-tacaacatggataaatcaagctat--aaatacatattttcaactgaaacaatgaagtgtttgttgttataacaacaacactaac 6606976  T
Q  573 gagattcacatatccgaatcagaatctgtttaaaatttat 612  Q
    || |||||||||| | | |  |||||||||| ||||||||    
T  6606977 gaaattcacatatgctactttgaatctgtttgaaatttat 6607016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 10708449 - 10708613
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| | || |||| |||| |||||| || ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10708449 atcaccatatttgagtgctcgtagtaccatattgatagttcggagaacttaaagttagaatggtggtaacaccatatttgagtggtctcagcaccataac 10708548  T
Q  111 aaagtggcaacaata--ccatattaaagtggtttcagtatt-aaagagtggtcttagtaccatat 172  Q
    | ||||  |||||||   ||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  10708549 agagtgttaacaatatcacatattaaagtggtttcagtattaaaagaatggtcttagtcccatat 10708613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 37 - 345
Target Start/End: Original strand, 17025904 - 17026213
Alignment:
Q  37 ccattttgatattttggaaaacttaaag-ctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaa 135  Q
    |||| |||||| ||| || ||||||||| || |||||||| ||||||||||||| |||||||| |||||||||  | |||||  |||  ||||||||| |    
T  17025904 ccatattgatactttagagaacttaaaggctggaatggtgataacaccatatttaagtggtcttagcaccatactagagtggtcacagcaccatattaga 17026003  T
Q  136 gtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatga 235  Q
    ||| ||||| |||||||||||||| |||| |||||| || | ||||||  | || ||  ||||||||| ||||||||||| |||||||| |||||| |||    
T  17026004 gtgatttcaatattaaagagtggtattaggaccata-ttaaaggtgtatgtgtcaaattgttttctaccgtgcagtagtt-accgcacaattgtagctga 17026101  T
Q  236 acttgttttatcctggaggtggcg-tggtgatagtctgccttgcac-aatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    ||||||||||||||  ||    || || |||||||||| ||||||| ||||| |   ||| || |||||||||||||||||||||| || |||||||| |    
T  17026102 acttgttttatcctaaagacaacgttgttgatagtctgtcttgcacaaatttagacggtgtcagaaaacgtcttaaagagagcgaattgatcgtgactta 17026201  T
Q  334 acctagtaacaa 345  Q
    ||||| ||||||    
T  17026202 acctattaacaa 17026213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 202 - 357
Target Start/End: Complemental strand, 29715774 - 29715617
Alignment:
Q  202 acagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggt-agtgccacaa 299  Q
    |||||||| ||||||||||||||| ||||| || |||||||||||||| |||| |||||||| |||||||| ||| ||||||||| ||  |||| ||| |    
T  29715774 acagtgcaatagttaaccgcacagctgtagctggacttgttttatcctagaggcggcgtggttgatagtcttcctagcacaattttggacagtgtcacga 29715675  T
Q  300 aacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||| |||||||  |||||||||||||||||| ||||||||| ||||||||    
T  29715674 aacgtcttaaaaagagcgatctggtcgtgactcaacctaataacaacttcggtagata 29715617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 10586016 - 10586127
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||||| ||||| || | | ||| |||||||||||||     |||||||||||||||||| ||||||||||    
T  10586016 tagaatggtggtaacaccatatttgagtggtctcaacaccaaaatagaatggtaacaataccatat-----tggtttcagtattaaagaatggtcttagt 10586110  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||||||||    
T  10586111 accatattagagggtgt 10586127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 239 - 342
Target Start/End: Complemental strand, 26962154 - 26962050
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacct 337  Q
    |||||||||||||||  |||||| | | |||||| |||||||||| ||| |||||||||| ||||||||||||||||||||  ||||||||||||||||     
T  26962154 tgttttatcctggagacggcgtgtttgttagtctaccttgcacaacttgtgtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaaccc 26962055  T
Q  338 agtaa 342  Q
    |||||    
T  26962054 agtaa 26962050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 31002958 - 31002847
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||||||||||||||||||||||  ||||||| | | ||| ||||||| |||||     ||||||| || ||||||||||||||||||    
T  31002958 tagaatggtggtaacaccatatttgagtggtctcaataccataatagaatggtaacaatatcatat-----tggtttcggtgttaaagagtggtcttagt 31002864  T
Q  166 accatatttgagggtgt 182  Q
    | |||||| ||||||||    
T  31002863 aacatattagagggtgt 31002847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 28125403 - 28125244
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||| | |||||  ||| |||||||| |     |||||| ||||||| |||| ||||||     
T  28125403 tagaatggtggtaacaccatatttgagtggtttcaacactataatagagtggtcacagtaccatatga-----gtttcaatattaaaagagttgtcttaa 28125309  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtag 231  Q
    ||||||||| |||| |||||  ||||||| |||||||||||| |||||||| |||||||| ||||||    
T  28125308 taccatattggagg-tgtaatactcgaactgttttctacagt-cagtagttgaccgcacaattgtag 28125244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 123 - 285
Target Start/End: Complemental strand, 20507866 - 20507699
Alignment:
Q  123 ataccatattaaagtggtttcagtattaaa---gagtggtcttagta-ccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaac 218  Q
    ||||||||||| |||||||||| |||||||   |||||  |||| || ||||||||| |||||||| |||| | |||||  ||| ||||||||||||||     
T  20507866 ataccatattagagtggtttcattattaaatttgagtgaccttaatagccatatttgcgggtgtaagtctcaaccggttggctagagtgcagtagttaat 20507767  T
Q  219 cgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaattt 285  Q
    ||||||  | | | ||  ||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  20507766 cgcacaactattgttggtcttgttttatcctagaggtggtgtggttgatagtctgccttgcacaattt 20507699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 208 - 366
Target Start/End: Complemental strand, 28125242 - 28125081
Alignment:
Q  208 cagtagttaaccgcacagttgtagatgaacttgtttt--atcctggaggtggcgtggtga-tagtctgccttgcacaatttgg-gtagtgccacaaaacg 303  Q
    |||||||| |||||||| |||||| ||||||||||||  ||||||||||  | ||||| | ||||||| ||||||||||||   | |||||||| ||| |    
T  28125242 cagtagttgaccgcacaattgtagttgaacttgtttttaatcctggaggcagtgtggttaatagtctgtcttgcacaattttaagcagtgccacgaaatg 28125143  T
Q  304 tcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttc 366  Q
    ||||||| ||||| |  ||||||||||||||||||||||||| || | |||||||||| ||||    
T  28125142 tcttaaa-agagcaacctggtcgtgactcaacctagtaacaatttcgatagatattctctttc 28125081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 13022122 - 13022024
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| |||||||||||| | |||||| ||||| |||||||  ||||||||||||||||    
T  13022122 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgttttaaaaagagcgacctggtcgtgactcaacc 13022024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 353
Target Start/End: Complemental strand, 27708925 - 27708855
Alignment:
Q  283 tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggta 353  Q
    |||||| |||||||| |||||||||||||||| |||  |||||||||||||||||||||||||||| ||||    
T  27708925 tttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactcaacctagtaacaacttcggta 27708855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 33089343 - 33089441
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||||| |||  |||||||| | |||||| |||||||||| | |||||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  33089343 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 33089441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 366
Target Start/End: Original strand, 19276760 - 19277049
Alignment:
Q  77 taacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttga 176  Q
    |||||||| ||||||||||| | |||||||||| | ||| |  | | || ||||||| | |||| | ||||| ||||||  ||||| ||| |||||| ||    
T  19276760 taacaccaaatttgagtggttt-agcaccataatagagtagtcatagtatcatattagactggtgttagtataaaagagatgtcttcgtatcatattaga 19276858  T
Q  177 gggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgcct 275  Q
    || ||||||||||||||  ||||| ||| |||||||| |||||||| |||| ||  ||| |||||||||| || ||||   ||||| |||||||||| ||    
T  19276859 gg-tgtaaatctcgaacaattttcaacattgcagtagctaaccgcatagttttaattgagcttgttttattctagaggcaacgtggttgatagtctgtct 19276957  T
Q  276 tgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttc 366  Q
    | ||||| ||| |  |||||||||||| |||||||| ||||  |  |  | || ||||||| || |||||||||| ||||||||||| ||||    
T  19276958 tacacaattttcgacagtgccacaaaaagtcttaaaaagagaaaccttattgtaactcaacttaataacaactttagtagatattctctttc 19277049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 20090662 - 20090757
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  20090662 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 20090757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 20095787 - 20095882
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  20095787 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 20095882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 34129169 - 34129264
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||| ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  34129169 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 34129264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 20810467 - 20810369
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| | |||||||||  | |||||||||||||||| |||  ||||||||||||||||    
T  20810467 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtagtgctgcgaaacgtcttaaagagaacgacctggtcgtgactcaacc 20810369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 45904371 - 45904437
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatatt 132  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | | | | ||||||||||||||    
T  45904371 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagaatagtaacaataccatatt 45904437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 45904827 - 45904893
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatatt 132  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |   ||| ||||||||||||||    
T  45904827 tagaatggtggtaacaccatatttgagtggtctcaacaccataataggatggtaacaataccatatt 45904893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 53119622 - 53119524
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||||| |||  |||||||| | |||||| |||||||||| ||| |||||||| | ||||||||||||||||||||  || |||||||||||||    
T  53119622 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgagtagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacc 53119524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 489
Target Start/End: Complemental strand, 18471976 - 18471863
Alignment:
Q  377 aatttggaaagccaaatacaacagtttggaa-tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattt 475  Q
    |||||||||| ||||||||| |||||| ||| | ||||||||||| ||||||||| |||| || || ||| ||||| |||||| |||||||||||| ||     
T  18471976 aatttggaaatccaaatacatcagtttagaaattcaaaaacaacaattttaagacgtttctatatgttatatctaccgaagaagttacttattgaggtta 18471877  T
Q  476 tgttgtaccaaaat 489  Q
     |||||||| ||||    
T  18471876 agttgtacctaaat 18471863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 239 - 342
Target Start/End: Original strand, 15768191 - 15768295
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacct 337  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||| ||  ||||||||| | ||||||||||||||||||||  ||||||||||||| ||     
T  15768191 tgttttatcctggagacggcgcggttgctagtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatccc 15768290  T
Q  338 agtaa 342  Q
    |||||    
T  15768291 agtaa 15768295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 377 - 471
Target Start/End: Original strand, 23661575 - 23661671
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaagacatttcgat-ctgctatgtctacagaagaaattacttattgag 471  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||| |||||| || ||| | | ||||||||||||| |||||| |||||| |||||    
T  23661575 aatttggaaatccaaatacaacagtttggaaattcaaaaacaacaattttaaaacgttttggtactgctatgtctaccgaagaagttacttgttgag 23661671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 3476946 - 3477041
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  3476946 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 3477041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 15763030 - 15763125
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||| ||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  15763030 tgttttatcctggagacggcgcggttgctagtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 15763125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 315
Target Start/End: Complemental strand, 16013968 - 16013724
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||| ||||||||| ||||| ||  ||||||| | |||||  | | ||||||| |  | |||||||| |||||||   |||| ||| |    
T  16013968 tagaatggtggtaacatcatatttgaatggtcacaataccataatagagtggtcatagtaccataattgattggtttcaatattaaaatatggtgttact 16013869  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-g 264  Q
    |||||||| |||| ||||| ||||||| | ||||| | ||||||        |  |||| |||||||||| ||| |||||||||||||| |||||||| |    
T  16013868 accatattggagg-tgtaattctcgaatgattttcaatagtgcat-------ctacacaattgtagatgagcttattttatcctggaggcggcgtggtgg 16013777  T
Q  265 atagtctgccttgcacaa--tttgggtagtgccacaaaacgtcttaaagagag 315  Q
    |||||||  |||||||||  ||| | ||||| ||| |||||||||||||||||    
T  16013776 atagtctatcttgcacaatttttagatagtgtcacgaaacgtcttaaagagag 16013724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 17368814 - 17368719
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  17368814 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 17368719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 38436991 - 38437089
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||| ||||| |||| ||||||||| |||||||||||||| || ||  || |||||||||||||    
T  38436991 tgttttatcctggagacggcgtggttgttagtctacctttcacaacttggatagtgccacgaaacgtcttaaagaaagtgacctgatcgtgactcaacc 38437089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 424
Target Start/End: Complemental strand, 29350208 - 29350160
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttt 424  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  29350208 aatttggaaatccaaatacaacagtttggaaatccaaaaacaacagttt 29350160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 2207759 - 2207818
Alignment:
Q  289 tagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    ||||||||| |||||||||||| |||||||  |||||||||||||| ||||| |||||||    
T  2207759 tagtgccactaaacgtcttaaaaagagcgacctggtcgtgactcaatctagtgacaactt 2207818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 2617256 - 2617355
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgg-gtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||| |||| ||| | |||||| ||||||||||  | | |||||||| | |||||||||||||| ||||| ||||| |||||||||||    
T  2617256 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaagaaagcgacatggttgtgactcaacc 2617355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 30341844 - 30341939
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    ||||||||||||||| ||| | ||| | |||||| |||| |||||||| ||||||||| | |||||||||||||| || ||  |||||||||||||    
T  30341844 tgttttatcctggagatggtgcggttgctagtctaccttacacaatttaggtagtgccgcgaaacgtcttaaagaaagtgacctggtcgtgactca 30341939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 54270739 - 54270644
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | ||| |||||||||| |||||  |||||||||||||    
T  54270739 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactca 54270644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 17364160 - 17364063
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcaca--atttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||  |||| ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  17364160 tgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 17364063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 377 - 423
Target Start/End: Complemental strand, 27708846 - 27708800
Alignment:
Q  377 aatttggaaagccaaatacaacagtttggaatccaaaaacaacagtt 423  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||    
T  27708846 aatttggaaatccaaatacaacagtttggaaatcaaaaacaacagtt 27708800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 266 - 331
Target Start/End: Complemental strand, 10321509 - 10321444
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgact 331  Q
    |||||| |||||||||||||  |||||||| | |||||||||||||| |||||  |||||||||||    
T  10321509 tagtctaccttgcacaatttaagtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 10321444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 421
Target Start/End: Original strand, 39775853 - 39775898
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaacag 421  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||    
T  39775853 aatttggaaatccaaatacaacagtttggaaatccaaaaacaacag 39775898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 3672554 - 3672510
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  3672554 aatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 3672510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 612
Target Start/End: Original strand, 12112936 - 12113008
Alignment:
Q  540 atgaagtgattgttgttataacaacgacaataagagattcacatatccgaatcagaatctgtttaaaatttat 612  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||| || ||| |  |||| ||||| ||||||||    
T  12112936 atgaagtgattcttgttataacaacaacaataagaaattcacagatgcgattttgaatatgtttgaaatttat 12113008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 13156223 - 13156259
Alignment:
Q  61 aaagctagaatggtggtaacaccatatttgagtggtc 97  Q
    |||| ||||||||||||||||||||||||||||||||    
T  13156223 aaagttagaatggtggtaacaccatatttgagtggtc 13156259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 23661534 - 23661570
Alignment:
Q  321 tggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||||||||||||||||||| ||||||||    
T  23661534 tggtcgtgactcaacctagtaacaacttcggtagata 23661570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 3482423 - 3482518
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || |||| |||| | ||| |||||||||| |||||  |||||||||||||    
T  3482423 tgttttatcctggagacggcgcggttgctagtctaccttgcacaaattaggtaatgccgcgaaaagtcttaaagaaagcgacctggtcgtgactca 3482518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 16013686 - 16013635
Alignment:
Q  379 tttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaaga 429  Q
    |||||||| |||||||||||||||||| ||||||||| ||||| ||||||||    
T  16013686 tttggaaatccaaatacaacagtttggaaatccaaaaccaacaattttaaga 16013635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 97
Target Start/End: Complemental strand, 35457666 - 35457635
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtc 97  Q
    ||||||||||||||||||||||||||||||||    
T  35457666 tagaatggtggtaacaccatatttgagtggtc 35457635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 47567093 - 47567203
Alignment:
Q  137 tggtttcagtattaaag-agtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatga 235  Q
    ||||||| ||||||||  |||| |||||||| |||||| |||  ||||| ||||||| | |||||||||||||| ||||||  | ||| |||||  ||||    
T  47567093 tggtttcggtattaaaatagtgctcttagtatcatattggaga-tgtaattctcgaaggattttctacagtgcaatagttattcacaccgttgtcaatga 47567191  T
Q  236 acttgttttatc 247  Q
    ||||||||||||    
T  47567192 acttgttttatc 47567203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 318
Target Start/End: Complemental strand, 48432458 - 48432423
Alignment:
Q  283 tttgggtagtgccacaaaacgtcttaaagagagcga 318  Q
    |||||| |||||||||||||||||||||||||||||    
T  48432458 tttgggcagtgccacaaaacgtcttaaagagagcga 48432423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 55128885 - 55128790
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||| ||||| || ||||||||| | |||||||||||||| | |||  |||||||||||||    
T  55128885 tgttttatcctggagacggcgcggttgctagtctaccttacacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca 55128790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 17357933 - 17357836
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcaca--atttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||  |||| ||||||||| | |||||||||||||| | |||  |||||||||||||    
T  17357933 tgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtcgtgactca 17357836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 66 - 96
Target Start/End: Original strand, 47566975 - 47567005
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggt 96  Q
    |||||||||||||||||||||||||||||||    
T  47566975 tagaatggtggtaacaccatatttgagtggt 47567005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 1688935 - 1688980
Alignment:
Q  286 gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgact 331  Q
    |||||||||| |||||||||||||||| |||||  |||||||||||    
T  1688935 gggtagtgccgcaaaacgtcttaaagaaagcgacctggtcgtgact 1688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 420
Target Start/End: Original strand, 14438823 - 14438864
Alignment:
Q  380 ttggaaagccaaatacaacagttt-ggaatccaaaaacaaca 420  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  14438823 ttggaaatccaaatacaacagtttgggaatccaaaaacaaca 14438864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 27605163 - 27605240
Alignment:
Q  266 tagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaa 342  Q
    |||||| ||||||||||  | |||||||||  | ||| ||||||||||||||||  ||||||||||||||||| ||||    
T  27605163 tagtctaccttgcacaaactcgggtagtgctgcgaaatgtcttaaagagagcgacttggtcgtgactcaacctggtaa 27605240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 4117628 - 4117704
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaa 342  Q
    |||||| |||||||||| || ||||||||| | ||| ||||||| || |||||  ||||||||||||| || |||||    
T  4117628 tagtctaccttgcacaacttaggtagtgccgcgaaatgtcttaacgaaagcgacctggtcgtgactcaccccagtaa 4117704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 8069647 - 8069603
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||    
T  8069647 aatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 8069603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 13166963 - 13166999
Alignment:
Q  61 aaagctagaatggtggtaacaccatatttgagtggtc 97  Q
    |||| |||||| |||||||||||||||||||||||||    
T  13166963 aaagttagaatagtggtaacaccatatttgagtggtc 13166999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 23666248 - 23666292
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||    
T  23666248 aatttggaaatccaaatacaacagtttggaaattcaaaaacaaca 23666292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 24038496 - 24038540
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||    
T  24038496 aatttggaaatccaaatacaacagtttggaaattcaaaaacaaca 24038540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 11 - 523
Target Start/End: Original strand, 37259649 - 37260148
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||  |||| |||| |||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  37259649 atcaccatatttgagtggttgtagtaccatattgatagtttggagaacttaaagttagaatggtgttaacaccatatttgagtggtctcagcaccataac 37259748  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37259749 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcag 37259848  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| ||  |||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||| ||||||||||    
T  37259849 tagttaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtctta 37259948  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aa 407  Q
    |||| |||||  |||||||||||||||||||||||||||| |||||||| |                 |||||||||| |||||||||||||||||| ||    
T  37259949 aagaaagcgacctggtcgtgactcaacctagtaacaacttcggtagataat---------------agaatttggaaatccaaatacaacagtttggaaa 37260033  T
Q  408 tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattttgttgtaccaaaattaaaacaaggataaatca 507  Q
    | ||||||||||| ||||||||| ||||  | || ||||||||| |||||| |||||| ||||| ||   |||| || ||| || || ||||||||||||    
T  37260034 ttcaaaaacaacaattttaagacgtttcattatgttatgtctactgaagaagttacttgttgagcttcaattgtccctaaa-tacaagaaggataaatca 37260132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 37264336 - 37264684
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||  |||| |||| |||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  37264336 atcaccatatttgagtggttgtagtaccatattgatagtttggagaacttaaagttagaatggtgttaacaccatatttgagtggtctcagcaccataac 37264435  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37264436 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcag 37264535  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||||| |||||| ||  |||||||||||||||||| ||||||| ||||||||||||||||| || |||||| |||||||| ||||||||||    
T  37264536 tagttaaccgcacaattgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtctta 37264635  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| | ||||||    
T  37264636 aagagagcgacctggtcgtgactcaacctagtaacaacttcgatagata 37264684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 16421352 - 16421004
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| |||||| |||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16421352 atcaccatatttgagtggtcgtagtgccatattgatactttggagaaattaaagttagaatggtggtaacaccatatttgagtggtctcagcaccataac 16421253  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||  |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||    
T  16421252 agagtgataacaatacaatattaaagtggtttcaatattaaagagtggtcttagtaccatattcgaaggtgtaaatctcggacggttttctacagtgcag 16421153  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| ||  |||||||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||| ||| ||||||    
T  16421152 tagttaaccgcacagttgtagctgggcttgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtctta 16421053  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    | ||||||||  |||||||||||||||||||||||||||| ||||||||    
T  16421052 atgagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 16421004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 11 - 471
Target Start/End: Complemental strand, 31273836 - 31273396
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| ||||||        |||||||||||||||||||||||||||||||    
T  31273836 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaat--------caccatatttgagtggtctcagcaccataac 31273745  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31273744 agagtggttacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcag 31273645  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||| ||||||||||| ||  |||||||||||||||||| ||||||| |||||||||| ||||||||| |||||| |||||||| ||||||||||    
T  31273644 tagttaaccacacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctta 31273545  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aa 407  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||||| |                 |||||||||| |||||||||||||||||| ||    
T  31273544 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataat---------------agaatttggaaatccaaatacaacagtttggaaa 31273460  T
Q  408 tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgag 471  Q
    | ||||||||||| ||||||||| |||| |||||||| |||||| |||||| |||||| |||||    
T  31273459 ttcaaaaacaacaattttaagacgtttcaatctgctacgtctaccgaagaagttacttgttgag 31273396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 31269349 - 31269009
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||  ||| |||||| |||||| ||||||||| ||||||        |||||||||||||||||||||||||||||||    
T  31269349 atcaccatatttgagtggtcgtagtatcatattgatagtttggagaacttaaagttagaat--------caccatatttgagtggtctcagcaccataac 31269258  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31269257 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcag 31269158  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||| ||| ||||||| || ||||||||||||||||||| ||||||| |||||||||||||||||||| ||| || |||||||| ||||||||||    
T  31269157 tagttaaccacacggttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtctta 31269058  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  31269057 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 31269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 11 - 348
Target Start/End: Complemental strand, 8694034 - 8693695
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||  ||||||||||||||||||||||||| ||||||||    
T  8694034 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtattaacaccatatttgagtggtctcagaaccataac 8693935  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||    
T  8693934 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacagtgcag 8693835  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || |||||||||| ||| ||||||||||||| |||| ||||||| ||||||| || ||||||||| ||||||||| ||||| ||||||||||    
T  8693834 tagttaatcgaacagttgtagctgagcttgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacgtctta 8693735  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  8693734 aagagagcgacctggtcgtgactcaacctagtaacaactt 8693695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 11 - 355
Target Start/End: Original strand, 12823673 - 12824013
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||| ||| ||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12823673 atcaccatatttgagtggtcgtagtgtcatattgatattttggagaaattaaagttagaatggtggtaacaccatatttgagtggtctcagcaccataac 12823772  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  12823773 agagtggtaacaataccattttaaagtggtttcagtattaaagagtggtcttagtaccatattcgaaggtgtaaatctcgaacggttttctacagtgcag 12823872  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||| |||||      |||||| ||||||||||||||||||| ||||||| ||||||| || ||||||||| |||||| |||||||| ||| ||||||    
T  12823873 tagttagccgca------tagatggacttgttttatcctggaggcggcgtggttgatagtttgtcttgcacaattttgggcagtgccacgaaatgtctta 12823966  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtaga 355  Q
    ||||||||||  ||||| |||||||||||| ||||||||| ||||||    
T  12823967 aagagagcgacctggtcatgactcaacctaataacaacttcggtaga 12824013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 19102300 - 19101952
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||  ||||| ||||| ||||||| || |||||| ||||||||||| |||| |||||||||||||||||| |||||||||    
T  19102300 atcaccatatttgagtggtcgtatggccatattgatgttttggagaaattaaagttagaatggtggcaacatcatatttgagtggtctcaacaccataac 19102201  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19102200 agagtggtaacaataccatattaaaatggttttagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcag 19102101  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| || ||||||||||||||||||| | ||||| ||||||||||  |||||||| |||| |||||||||| ||||||||||    
T  19102100 tagttaaccgcacagttgtagttggacttgttttatcctggaggcgacgtggttgatagtctgttttgcacaattttgagtagtgccacgaaacgtctta 19102001  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    || |||| ||  | ||||||||| |||||||||||||||||| ||||||    
T  19102000 aacagagtgacctcgtcgtgacttaacctagtaacaactttgatagata 19101952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 69 - 348
Target Start/End: Complemental strand, 55251984 - 55251704
Alignment:
Q  69 aatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtacc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55251984 aatggtggtaacaccatatttgagtggtctcagcaccataacagagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtacc 55251885  T
Q  169 atatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgata 267  Q
    |||||  | ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||| |||||    
T  55251884 atattcaaaggtgtaaatctcgaacggttttctacagtgcagtagttaaccgtacagttgtagttgggcttgttttatcctggaggtggcgtggttgata 55251785  T
Q  268 gtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    ||||| ||||||||| |||||  |||||||| |||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  55251784 gtctgtcttgcacaattttggacagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactcaacctagtaacaactt 55251704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 5927991 - 5928339
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| | || ||||||||||| |||| ||||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  5927991 atcaccatatttgagtggtcgtggtaccattttgatagtttgaaaaacttaaaattagaacggtgttaacaccatatttgagtggtctcagcaccataac 5928090  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||| ||| ||||| |||||||||||||||    
T  5928091 agagtggtaacaataccatattaaagtggtttaagtattaaagagtggtcttagtaccatatttggaggtgtaattcttgaacgattttctacagtgcag 5928190  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || ||||||| || ||  |||||||||||||||||| || |||| |||||||||||||||||||| |||| | |||||||| |||| |||||    
T  5928191 tagttaatcgaacagttgcagctgggcttgttttatcctggaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaacatctta 5928290  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  ||||||||||||||||| |||||||||| ||||||||    
T  5928291 aagagagcgacctggtcgtgactcaacctggtaacaacttcggtagata 5928339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 13059732 - 13059385
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    ||||||||||||||| |||| ||||||||| |||||| |||||| || |||||| ||||||||||  ||||||||||||||||||||||||||||||||     
T  13059732 atcatcatatttgagtggtcgtagtgccatattgatactttggagaaattaaagttagaatggtgacaacaccatatttgagtggtctcagcaccataat 13059633  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||| |||||    
T  13059632 agagtggtaacaataccatattaaagtggtttcaatattaaagagtggtcttagaaccatatttgaaggtgt-aatctcgaacggttttctacaatgcag 13059534  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||| ||||||||||| ||| |||||||||| || |||| || |||| |||||||||| ||||||||| |||  | |||||||| ||||||||||    
T  13059533 tagttaaccacacagttgtagctgagcttgttttattctagaggcggagtggttgatagtctgtcttgcacaattttatgcagtgccacgaaacgtctta 13059434  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  ||||| |||||||||||||||| ||||| ||||||||    
T  13059433 aagagagcgatctggtcatgactcaacctagtaataacttcggtagata 13059385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 51698239 - 51697892
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| | || ||||| ||| ||||| ||||||| || |||||| ||| |||||||||| |||||||||||||||||||| |||| ||||    
T  51698239 atcaccatatttgagtgatcgtagtgtcatattgatgttttggagaaattaaagttaggatggtggtaaaaccatatttgagtggtctcaacaccctaac 51698140  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | |||||  |||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  51698139 agagtggtgacaataccatattaaagtagtttcaatattaaagagtgatcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgca- 51698041  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||||| |||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||| | |||| ||  ||||||||||    
T  51698040 tagttaaccgcacaattgtagttgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgtcatgaaacgtctta 51697941  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    || |||||||  |||||||||||||||||||||||||||| ||||||||    
T  51697940 aaaagagcgatctggtcgtgactcaacctagtaacaacttcggtagata 51697892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 11 - 318
Target Start/End: Original strand, 31729163 - 31729468
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||  ||||||| || |||||| ||||||||| | ||||||||||||||||||||||| |||||||||    
T  31729163 atcaccatatttgagtggtcgtagtgccatattgaagttttggagaaattaaagttagaatggttgcaacaccatatttgagtggtctcaacaccataac 31729262  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | |||||  |||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31729263 agagtggttacaataccatag----gtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcag 31729358  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg-gtgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||||||||| || || ||||||||||||||||||| ||||||  |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  31729359 tagttaaccgcacagttgcagctggacttgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtctta 31729458  T
Q  309 aagagagcga 318  Q
    ||||||||||    
T  31729459 aagagagcga 31729468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 47244571 - 47244223
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| ||||||| || |||| || || ||| ||||| ||||||| || |||||| ||||||||||| ||||||||||||||||||||||| |||||||||    
T  47244571 atcaccatatttaagtggtcgtaatgtcatattgatgttttggagaaattaaagttagaatggtggcaacaccatatttgagtggtctcaacaccataac 47244472  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  47244471 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgggggtttaattctcgaacggttttctacagtgcag 47244372  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| ||  |||||||||||||||||| ||||||| |||||||||  |||  | || ||||   |||||||| ||||||||||    
T  47244371 tagttaaccgcacagttgtagttgtgcttgttttatcctggaggcggcgtggttgatagtctttcttcaataattttgaacagtgccacgaaacgtctta 47244272  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||| ||||  || ||||||||||||||| ||||||||| | ||||||    
T  47244271 aagagggcgacctgatcgtgactcaacctactaacaacttcgatagata 47244223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 5271195 - 5271539
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||  ||||||| || |||||| ||||||||||| ||||||||||||||||||||| | |||||||||    
T  5271195 atcaccatatttgagtggtcgtagtgccatattgaagttttggagaaattaaagttagaatggtggcaacaccatatttgagtggtctgaacaccataac 5271294  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | |||||  |||||||||||     ||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||||| ||||||||||||||     
T  5271295 agagtggttacaataccatag----gtggtttcagtattaaagagtggtcttagcaccatatttggaggtgtaattctcgaacgattttctacagtgcaa 5271390  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||| || |  |||||||||| || ||||||||||||||||||| ||||||| |||||||||| ||||||||| |||||| |||||||| ||||||||||    
T  5271391 tagtgaatcaaacagttgtagttggacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctta 5271490  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  5271491 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 5271539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 19106931 - 19106594
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||| ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| |||||||||    
T  19106931 atcaccatatttgagtggtcgtagtgccatattgatgttttggagaaattaaagttagaatggtggcaacaccatatttgagtgttctcaacaccataac 19106832  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  19106831 agagtggtaacaataccatattaaaatggtttctgtattaaagagtgatcttaataccatatttgagggtgtaattctcgaacggttttctacagtgcag 19106732  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||| ||            ||||||||| ||||||| | ||||| |||||||| ||||||||||| |||||| ||||| |  ||||||||||    
T  19106731 tagttaaccgcaaag-----------gttgttttattctggaggcgacgtggttgatagtcagccttgcacaattttgggcagtgctatgaaacgtctta 19106643  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||| |||||  || | ||||||||||||||||||||||| ||||||||    
T  19106642 aagaaagcgatctgcttgtgactcaacctagtaacaacttcggtagata 19106594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 66 - 357
Target Start/End: Original strand, 33463183 - 33463476
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||| | || | ||| |||||||||||||||||||||| ||||| |||| || |    
T  33463183 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagagttgtaatagtacaatattaaagtggtttcagtattaaaagaatggttttgg 33463282  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||| |||| ||||||| ||||||||||||||||||| |||||||||||| || |||||||||| ||  |||||||||||||||||| |||| || |    
T  33463283 taccata-ttgaaggtgtaattctcgaacggttttctacaatgcagtagttaatcgaacagttgtagttgtgcttgttttatcctggaggcggcggggtt 33463381  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    || | |||||||||||||| |||||  |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| | ||||||    
T  33463382 gacaatctgccttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagata 33463476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 37 - 345
Target Start/End: Original strand, 19540959 - 19541269
Alignment:
Q  37 ccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaag 136  Q
    |||| |||||| |||||| ||||||||| |||||| ||| |||||||||||||||||||||||| ||||||| || ||||| ||||||| ||||||||||    
T  19540959 ccatattgatagtttggagaacttaaagttagaatagtgttaacaccatatttgagtggtctcaacaccatagcagagtggtaacaatatcatattaaag 19541058  T
Q  137 tggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaa 236  Q
    |||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||||||||| || || ||||||| || |    
T  19541059 tggtttcaatattaaagagtggtcttagtaccatatttggaggtgtaattctcgaacggttttctacaatgcagtagttaatcgaactgttgtagctgga 19541158  T
Q  237 cttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaa 334  Q
    |||||||||||||  ||| ||||||| |||||||||| |||| |||| |||    | |||||| |||  ||||||| ||| |||  || |||||||||||    
T  19541159 cttgttttatcctataggcggcgtggttgatagtctgtcttgtacaattttaaacaatgccacgaaatatcttaaaaagaacgatctgatcgtgactcaa 19541258  T
Q  335 cctagtaacaa 345  Q
    |||||||||||    
T  19541259 cctagtaacaa 19541269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 66 - 342
Target Start/End: Original strand, 48276476 - 48276749
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttag 164  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| | ||||| |||| |||||||||||||||||||||||||| ||||| ||||||| |    
T  48276476 tagaatggtggtaacaccatattcgagtggtctcaacaccataatagagtggtaacagtaccatattaaagtggtttcagtattaaaagaatggtcttgg 48276575  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| ||||||| |||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||||| |    
T  48276576 taccatattgga-ggtgtaattctcgaatggttttctacagtgcagtagttaatcgaacagttgtagctgaacttgttttatcctggaggcggcgtggtt 48276674  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaa 342  Q
    ||||||     |||||||| ||||   ||||| |||||||||||||||||||||||  || |||||| ||||||||||||    
T  48276675 gatagt-----ttgcacaattttgaacagtgcaacaaaacgtcttaaagagagcgacctgatcgtgattcaacctagtaa 48276749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 66 - 357
Target Start/End: Original strand, 8030303 - 8030596
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||||| |||| |||||||||||| |||||| |||||| ||||| || |||| |    
T  8030303 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagagtggtaacagtaccatattaaaatggttttagtattaaaagaatgatcttgg 8030402  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcg-tggt 263  Q
    || |||||| || ||||||| | |||||||||||||||||||||||||||||| || ||| |||||| ||  ||||||||||||||||||  ||| || |    
T  8030403 tatcatattgga-ggtgtaattttcgaacggttttctacagtgcagtagttaatcgaacatttgtagctgggcttgttttatcctggaggcagcgttgtt 8030501  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||  || | |||| |||||||||||||||||| ||||||||    
T  8030502 gatagtctatcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctgattgtgattcaacctagtaacaacttcggtagata 8030596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 66 - 355
Target Start/End: Original strand, 13521821 - 13522110
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    |||||||||||||||| |||||||||||||||||| |||||||| | |||||  | | |||||||||     ||||||||||||||| ||||||||||||    
T  13521821 tagaatggtggtaacaacatatttgagtggtctcaacaccataatagagtggtcatagtaccatatt-----ggtttcagtattaaaagagtggtcttag 13521915  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtaga---tgaacttgttttatcctggaggtggcgtg 261  Q
    |||||||||  | | ||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||    || ||||||||||||||||||| ||||||    
T  13521916 taccatattaaaag-tgtaattctcgaacggttttctacagtgcagtagtcaaccgtacagttgcagcagctggacttgttttatcctggaggcggcgtg 13522014  T
Q  262 gt-gatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtaga 355  Q
    || ||||||||| |||||||||||| ||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  13522015 gttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtaga 13522110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 66 - 357
Target Start/End: Original strand, 33468800 - 33469093
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttag 164  Q
    ||||||| ||||||||||| ||||||||||||||| || ||||| | ||| | || | |||||||||||||||||||||||||| ||||| ||||||| |    
T  33468800 tagaatgatggtaacaccaaatttgagtggtctcaacatcataatagagttgtaatagtaccatattaaagtggtttcagtattaaaagaatggtcttgg 33468899  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| |||| |||  | ||| |||||||||||||||| || ||| |||||| ||| ||||||||||| |||||||||||||| |    
T  33468900 taccatattgga-ggtgtaattctcaaaccttattcaacagtgcagtagttaatcgaacaattgtagctgagcttgttttatcatggaggtggcgtggtt 33468998  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    || |||||||||||||||| |||||| ||||||||||||||||||||||||| |||  | ||||||||||||||||||||||||||  |||||||    
T  33468999 gacagtctgccttgcacaactttgggcagtgccacaaaacgtcttaaagagaacgacctagtcgtgactcaacctagtaacaacttcagtagata 33469093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 69 - 464
Target Start/End: Complemental strand, 12878503 - 12878109
Alignment:
Q  69 aatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttagtac 167  Q
    |||||||||||||||||||||||||| ||||| |||||||||  |||||  ||  ||||||| || ||| ||||||  |||||| ||||||||||||||     
T  12878503 aatggtggtaacaccatatttgagtgttctcaacaccataactgagtggtcaccgtaccatactagagtcgtttcaacattaaaagagtggtcttagtat 12878404  T
Q  168 catatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gat 266  Q
    |||||| |||| ||||| |||||||||||||||||| |||||||| |||||  ||||||||||| |||||||||||||| |||||||||||||| | |||    
T  12878403 catattggagg-tgtaattctcgaacggttttctac-gtgcagtaattaacaacacagttgtagctgaacttgttttattctggaggtggcgtgattgat 12878306  T
Q  267 agtctgccttgcacaatttgggta-gtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttttt 365  Q
    ||||||| ||||||||||| |  | ||| ||| ||||||||||||||||||||  || |||||||||||||||||||||||||  ||||||||||| | |    
T  12878305 agtctgctttgcacaattttgaaaagtgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaacctagtaacaacttccgtagatattctctat 12878206  T
Q  366 cnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattact 464  Q
    |          ||||||| || ||||||| |||| ||||| ||||||||||||||| ||||||||| ||||  ||| | |||| ||| ||||||||||||    
T  12878205 caaaatag---aatttgggaacccaaatataacaatttggaaatccaaaaacaacaattttaagacgtttccttctaccatgtgtaccgaagaaattact 12878109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 29 - 334
Target Start/End: Complemental strand, 40408507 - 40408196
Alignment:
Q  29 tcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccat-aacaaagtggcaacaatacc 127  Q
    |||||| | ||| ||||||||||||| ||||||||| ||||||||||||  |||||||||||||||||| ||||||||| |||| ||||  |||||||||    
T  40408507 tcatagggtcatattgatattttggagaacttaaagttagaatggtggtggcaccatatttgagtggtcccagcaccataaacagagtgctaacaatacc 40408408  T
Q  128 atattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatct--cgaacggttttctacagtgcagtagttaaccgcacag 225  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| ||  |||||||||   ||||||||||||||||| ||||| |||||| ||||     
T  40408407 atattaaagtgatttcaatattaaaaagtggtcttagtaccatatttaagaatgtaaatcttgagaacggttttctacagtacagtaattaaccacacaa 40408308  T
Q  226 ttgtagatgaacttgttttatcctggaggtggcgtggt--gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatg 322  Q
    |||||| |||||||||||||||||  | | || ||| |  |||| |||  ||||||||| |||  | ||||| |||||||||||||||||||| ||  ||    
T  40408307 ttgtagttgaacttgttttatcctaaaagcggtgtgattggataatctatcttgcacaactttaagcagtgctacaaaacgtcttaaagagagtgacctg 40408208  T
Q  323 gtcgtgactcaa 334  Q
    ||||| ||||||    
T  40408207 gtcgtaactcaa 40408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 61 - 348
Target Start/End: Original strand, 42758573 - 42758866
Alignment:
Q  61 aaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaag---agtg 157  Q
    |||| |||||||||||||||||||||||| | ||||||||| ||||||| | | |||  ||| ||| |||| | |||||  ||||||| |||    ||||    
T  42758573 aaagttagaatggtggtaacaccatatttaaatggtctcagtaccataatagaatggtcacagtacgatataatagtggggtcagtatcaaattaaagtg 42758672  T
Q  158 gtcttagta-ccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtg 256  Q
    |  ||| || |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||   || ||| ||||||| ||||||| |    
T  42758673 gctttaatagccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaatcgcacagttgtttttggactagttttattctggaggcg 42758772  T
Q  257 gcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
     ||||| |||||||||| ||||||||| |||||| |||||||| |||| |||||||||||||||  ||||||||||||||||||||||||||||    
T  42758773 acgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 42758866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 13065589 - 13065776
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||||  || ||||||||||| | ||||||||| |||||||||||||||||||||||||||| || ||||||| |||||    
T  13065589 atcaccatatttgagtggtcgtagtgttatattgatattttg-agaacttaaagttagaatggtggtaacaccatatttgagtagtatcagcactataac 13065687  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggtttt 199  Q
    | | ||  ||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  13065688 agactgataacaataacatattaaagtggtttcggtattaaagagtggttttagtaccatatttgagggtgtaaatctcgaatggtttt 13065776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 19906518 - 19906226
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    |||||||||| || ||||||||||||||| |||| ||||||||| | ||||| ||||||||||||||| |||||||| ||||||||| || ||||||| |    
T  19906518 tagaatggtgatagcaccatatttgagtgatctcggcaccataatagagtggtaacaataccatattagagtggtttaagtattaaaagaatggtcttgg 19906419  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt- 263  Q
    ||||||||| |||| ||||| | ||||||||||||||| || |||||||||| |   |||||||||| ||| |||||||||||||||||| ||||  ||     
T  19906418 taccatattggagg-tgtaattttcgaacggttttctaaagcgcagtagttatcaa-acagttgtagttgagcttgttttatcctggaggcggcggagtt 19906321  T
Q  264 gatagtctgccttgcacaatttgggt-agtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||| ||||||||||||  |  |||| |||  ||||||||||| |||||||  || ||||||||||||||| ||| ||||| ||||||||    
T  19906320 gatagtctgtcttgcacaattttagacagtgtcactgaacgtcttaaaaagagcgacctgatcgtgactcaacctaataataacttcggtagata 19906226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 15134476 - 15134283
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaa-gctagaatggtggtaacaccatatttgagtggtctcagcaccataa 109  Q
    |||| |||||||||| |||| ||||| ||| ||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||| | ||||||||    
T  15134476 atcaccatatttgagtggtcctagtggcatattgatattttggagaacttaaatgttagaatggtggtaacaccatatttgagtggtcttaacaccataa 15134377  T
Q  110 caaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctac 203  Q
     | ||| |  ||||||| |||||| |||||||| ||||||||||| | | ||||||||||||||| ||||| |||||||||||| |||||||||    
T  15134376 tagagtagtcacaatacgatattagagtggttttagtattaaagaatagccttagtaccatatttaagggtataaatctcgaacagttttctac 15134283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 165 - 441
Target Start/End: Original strand, 32082017 - 32082280
Alignment:
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||  || ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||  ||| |||||||||||||||||| ||||||| |    
T  32082017 taccatatccgaaggtgtaaatctcgaatggttttctacactgcagtagttaaccgcacaattgtaactgagcttgttttatcctggaggcggcgtggtt 32082116  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctt 362  Q
    |||||| |||||||||||| |||||  |||||||  ||| |||||||| |||| ||  |||||||||||||||||||||||||||| ||| |||| |       
T  32082117 gatagt-tgccttgcacaattttggacagtgccatgaaatgtcttaaaaagagtgatctggtcgtgactcaacctagtaacaacttcggttgataat--- 32082212  T
Q  363 tttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaagacatttcgatctg 441  Q
                  |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  32082213 ------------agaatttggaaatccaaatacaacagtttggaaatccaaaaacaacaattttaagacgtttcgatctg 32082280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 124 - 359
Target Start/End: Complemental strand, 4551203 - 4550971
Alignment:
Q  124 taccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcac 223  Q
    |||||||||| |||||||||||||    ||| ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||     
T  4551203 taccatattagagtggtttcagta----agaatggtcttagtaccatatttgatggtgtaaatcttaaacggttttctacagtgcagtagttaatcgcag 4551108  T
Q  224 agttgtagatgaacttgttttatcctggaggtggcgt-ggtgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaat 321  Q
    |||||||  |||  ||||||||||||||||| ||||| | |||||||||| ||||||||| |||| | |||| || |||| ||||||||  || |||  |    
T  4551107 agttgtaattgagtttgttttatcctggaggcggcgtagttgatagtctgtcttgcacaactttgagcagtggcataaaatgtcttaaa-tgaacgacct 4551009  T
Q  322 ggtcgtgactcaacctagtaacaactttggtagatatt 359  Q
      || |||||||||||||||||||||| | ||||||||    
T  4551008 aatcatgactcaacctagtaacaacttcgatagatatt 4550971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 154 - 357
Target Start/End: Complemental strand, 2820024 - 2819819
Alignment:
Q  154 agtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggag 253  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||  ||||||  ||| |||||||| | ||||||||||||||||||     
T  2820024 agtggtcttagtgtcatatttgagggtgtaaatctcgaacgattttctatagtgcaacagttaattgcatagttgtagctaaacttgttttatcctggac 2819925  T
Q  254 gtggcgtggt-gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttgg 351  Q
    | ||| |||| |||||||| |||||||||| |||||  ||| |||| |||| ||||||||| | |||  |||||||||||||| ||||||||||||| |     
T  2819924 gcggcatggtagatagtctaccttgcacaattttggacagtaccacgaaacatcttaaagaaaacgacctggtcgtgactcaatctagtaacaacttcga 2819825  T
Q  352 tagata 357  Q
    ||||||    
T  2819824 tagata 2819819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 357
Target Start/End: Complemental strand, 31765998 - 31765861
Alignment:
Q  222 acagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaa 319  Q
    |||||||||| || ||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||     
T  31765998 acagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagtgac 31765899  T
Q  320 atggtcgtgactcaacctagtaacaactttggtagata 357  Q
     |||| ||||||||||||||||||||||| ||||||||    
T  31765898 ctggttgtgactcaacctagtaacaacttcggtagata 31765861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 31766133 - 31766001
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||  |||||||||||||||||||||||||||||||||     
T  31766133 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtattaacaccatatttgagtggtctcagcaccataat 31766034  T
Q  111 aaagtggcaacaataccatattaaagtggtttc 143  Q
    | ||||| |||||||||||||||||||||||||    
T  31766033 agagtggtaacaataccatattaaagtggtttc 31766001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 137 - 357
Target Start/End: Complemental strand, 47574817 - 47574600
Alignment:
Q  137 tggtttcagtattaaa-gagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatga 235  Q
    |||||||||||||||| |||| ||||||||||      ||| ||||||| |||||||| ||||||||||  ||||||||||||||||||||||||| ||     
T  47574817 tggtttcagtattaaaagagttgtcttagtac------tgaaggtgtaattctcgaacagttttctacatggcagtagttaaccgcacagttgtagctgg 47574724  T
Q  236 acttgttttatcctggaggtggcgtg-gtgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    ||||||||||||||||| | ||||||  ||||| | || ||||||||| ||||||||||| ||  ||||||||||||||||||||  || | ||||||||    
T  47574723 acttgttttatcctggatgcggcgtgattgatattttgtcttgcacaattttgggtagtgtcaagaaacgtcttaaagagagcgacctgattgtgactca 47574624  T
Q  334 acctagtaacaactttggtagata 357  Q
    ||||| |||||| || ||||||||    
T  47574623 acctaataacaaattcggtagata 47574600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 127 - 361
Target Start/End: Complemental strand, 12874746 - 12874510
Alignment:
Q  127 catattaaagtggtttcagtattaaa-gagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacag 225  Q
    ||||||| | || ||||||||||||| | ||||||||| ||||||||| || | ||||| ||   ||||||||||||||||| ||||||||||||||||     
T  12874746 catattagaatgatttcagtattaaaagggtggtcttactaccatattggaag-tgtaattcattaacggttttctacagtgtagtagttaaccgcacaa 12874648  T
Q  226 ttgtagatgaacttgttttatcctggaggtggcgtg-gtgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatgg 323  Q
    || ||| ||| |||||||||||||||||| ||||||  |||| |||||| |||||||| ||| |  |||||||| ||  ||||||||||||||||  ||     
T  12874647 ttttagctgagcttgttttatcctggaggcggcgtgattgatggtctgctttgcacaattttagacagtgccacgaattgtcttaaagagagcgatctga 12874548  T
Q  324 tcgtgactcaacctagtaacaactttggtagatattct 361  Q
    | ||||||||||||| |||||||||  |||||||||||    
T  12874547 ttgtgactcaacctaataacaacttcagtagatattct 12874510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 32081904 - 32082024
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| |||||| |||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  32081904 atcaccatatttgagtggtcgtagtgccatattgatactttggagaaattaaagttagaatggtggtaacaccatatttgagtggtctcagcaccataat 32082003  T
Q  111 aaagtggcaacaataccatat 131  Q
    | || || |||||||||||||    
T  32082004 agagcggtaacaataccatat 32082024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 7902939 - 7903050
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | | ||| |||||||||||||     |||||||||||||||||||||||||||||    
T  7902939 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagaatggtaacaataccatat-----tggtttcagtattaaagagtggtcttagt 7903033  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||| ||||    
T  7903034 accatattagagagtgt 7903050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 73 - 252
Target Start/End: Original strand, 8649469 - 8649643
Alignment:
Q  73 gtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttagtaccata 171  Q
    ||||||||||||||| | | |||||||| || ||||| | |||||  ||| |||||||||     ||||||||||||||| ||||||| |||||||||||    
T  8649469 gtggtaacaccatatctaaatggtctcaacatcataatagagtggtcacagtaccatatt-----ggtttcagtattaaaagagtggtgttagtaccata 8649563  T
Q  172 tttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctgga 252  Q
    || || ||||||| |||||||| ||||||||||||| ||||||||||||||||||||||| |   ||||||||||||||||    
T  8649564 tt-gaaggtgtaattctcgaacagttttctacagtgtagtagttaaccgcacagttgtagttaggcttgttttatcctgga 8649643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 73 - 252
Target Start/End: Original strand, 8661276 - 8661450
Alignment:
Q  73 gtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttagtaccata 171  Q
    ||||||||||||||| | | |||||||| || ||||| | |||||  ||| |||||||||     ||||||||||||||| ||||||| |||||||||||    
T  8661276 gtggtaacaccatatctaaatggtctcaacatcataatagagtggtcacagtaccatatt-----ggtttcagtattaaaagagtggtgttagtaccata 8661370  T
Q  172 tttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctgga 252  Q
    || || ||||||| |||||||| ||||||||||||| ||||||||||||||||||||||| |   ||||||||||||||||    
T  8661371 tt-gaaggtgtaattctcgaacagttttctacagtgtagtagttaaccgcacagttgtagttaggcttgttttatcctgga 8661450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 13065793 - 13065896
Alignment:
Q  263 tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattct 361  Q
    ||||||||| |||| ||||| |||||| |||||||  |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||    
T  13065793 tgatagtctccctttcacaactttgggcagtgccatgaaacgtcttaaagagagcgacatagtcgtgactcaacctagtaacaacttcggtagatattct 13065892  T
Q  362 tttt 365  Q
    ||||    
T  13065893 tttt 13065896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 66 - 171
Target Start/End: Complemental strand, 34560688 - 34560588
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | | ||| |||||||||||||     |||||||| ||||||||||||||||||||    
T  34560688 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagaatggtaacaataccatat-----tggtttcaatattaaagagtggtcttagt 34560594  T
Q  166 accata 171  Q
    ||||||    
T  34560593 accata 34560588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 3997890 - 3998001
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||| ||| | |||||||||||     |||||||||||||||||| |||| |||||    
T  3997890 tagaatggtggtaacaccatatttgagtggtctcaacaccataataaaatggtagcaataccatat-----tggtttcagtattaaagaatggttttagt 3997984  T
Q  166 accatatttgagggtgt 182  Q
    ||||||||  |||||||    
T  3997985 accatattatagggtgt 3998001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 377 - 504
Target Start/End: Original strand, 32221222 - 32221350
Alignment:
Q  377 aatttggaaagccaaatacaacagtttggaa-tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattt 475  Q
    |||||| ||| |||||||||||| |||| || ||||||||||||| ||||||||   ||||||||||||||||||| ||||||||||||||||||| ||     
T  32221222 aatttgaaaatccaaatacaacaatttgaaaatccaaaaacaacaattttaagatggttcgatctgctatgtctaccgaagaaattacttattgaggtta 32221321  T
Q  476 tgttgtaccaaaattaaaacaaggataaa 504  Q
    |||||| ||  |||  |||||||||||||    
T  32221322 tgttgtccctgaatataaacaaggataaa 32221350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 6943091 - 6942991
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||  |||| |||| |||||| ||| || || |||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  6943091 atcaccatatttgagtggttgtagtaccatattgatagttttgagaaattaaagttagaatggtggtaacaccatatttgagtagtctcagcaccataac 6942992  T
Q  111 a 111  Q
    |    
T  6942991 a 6942991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 31298221 - 31298332
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||| |||||||||||||||||||| |||||||  | |||||  ||||||||||||     |||||||| ||||||||||||||  ||||    
T  31298221 tagaatggtggtaaaaccatatttgagtggtctcaacaccatagtagagtggtcacaataccatat-----tggtttcaatattaaagagtggttatagt 31298315  T
Q  166 accatatttgagggtgt 182  Q
    ||||||||||| |||||    
T  31298316 accatatttgatggtgt 31298332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 653138 - 653043
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| |||||||||||| | ||||||||||||||||||||  |||||||||||||    
T  653138 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 653043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 51697072 - 51696989
Alignment:
Q  263 tgatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaa 345  Q
    ||||||||||||||||||||||| ||| |||||||  ||||||||||| ||||||||  |||||||||||||||||||||||||    
T  51697072 tgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaggagagcgacctggtcgtgactcaacctagtaacaa 51696989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 10120811 - 10120913
Alignment:
Q  241 ttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctag 339  Q
    |||||||||||||  |||||||| | |||||| |||||||||| |||||||||||| | ||||||||||||||||||||  || |||||||||||||| |    
T  10120811 ttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacctgg 10120910  T
Q  340 taa 342  Q
    |||    
T  10120911 taa 10120913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 39319833 - 39319730
Alignment:
Q  69 aatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtacc 168  Q
    |||||||||||||||||||||||||| |||||||||||||| | | |||  ||||||| ||||     ||||||||||||| ||||||| ||||||||||    
T  39319833 aatggtggtaacaccatatttgagtgttctcagcaccataatagaatggtcacaatactatat-----tggtttcagtattgaagagtgatcttagtacc 39319739  T
Q  169 atatttgag 177  Q
    |||| ||||    
T  39319738 atatctgag 39319730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 47574920 - 47574817
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | |||||  | | ||||||||     ||||||||||||| ||||||||||| |||    
T  47574920 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagagtggtcatagtaccatat-----tggtttcagtattaaaagagtggtcatag 47574826  T
Q  165 taccatatt 173  Q
    |||||||||    
T  47574825 taccatatt 47574817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 16948169 - 16948075
Alignment:
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgt 260  Q
    |||||||| |||||||||| ||| ||| | ||  |||||||| ||||||||| |||||||||||  ||||||||||||||||||||||| |||||    
T  16948169 accatattcgagggtgtaattctagaatgattagctacagtgtagtagttaatcgcacagttgtcaatgaacttgttttatcctggaggcggcgt 16948075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 36354271 - 36354176
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  36354271 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 36354176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 36359389 - 36359294
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  36359389 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 36359294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 39999164 - 39999069
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  39999164 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 39999069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 40004122 - 40004027
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  40004122 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 40004027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 53797724 - 53797629
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||| ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  53797724 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 53797629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 54343270 - 54343203
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| |||||||||||| |||||||||| | ||||||||||||||||||||  |||||||||||||    
T  54343270 tagtctaccttgcacaattcgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 54343203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 54348452 - 54348357
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  54348452 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 54348357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 8980285 - 8980380
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  8980285 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 8980380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 8985405 - 8985500
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  8985405 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 8985500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 13700605 - 13700510
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  13700605 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 13700510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 237 - 310
Target Start/End: Complemental strand, 16953182 - 16953107
Alignment:
Q  237 cttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaa 310  Q
    |||||||||||||||||| |  ||||| ||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  16953182 cttgttttatcctggaggcgttgtggttgatagtctgccttgcacaattttgggtagtaccacgaaacgtcttaaa 16953107  T

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Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 21299833 - 21299928
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  21299833 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21299928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 24490127 - 24490028
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaat-ttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||||||||||||||| ||| | |||||| ||||||||||  |||  ||||| | | ||||||||||||||||||||  ||||||||||||||||    
T  24490127 tgttttatcctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtcgtgactcaacc 24490028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 39217271 - 39217356
Alignment:
Q  121 caataccatattaaagtggtttcagtattaaa---gagtggtcttagta-ccatatttgagggtgtaaatctcgaacggttttcta 202  Q
    ||||||||||| | ||||||||||||||||||   ||||||||||| || |||| ||||||||||||| ||||||||| |||||||    
T  39217271 caataccatataacagtggtttcagtattaaattcgagtggtcttaatagccatgtttgagggtgtaagtctcgaacgattttcta 39217356  T

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Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 41393340 - 41393245
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  41393340 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 41393245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 51019373 - 51019468
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  51019373 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 51019468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 274 - 340
Target Start/End: Original strand, 52691091 - 52691158
Alignment:
Q  274 cttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagt 340  Q
    |||||||||||| ||| || | |||||||||||||||||||||||| ||| |||||||||||||||||    
T  52691091 cttgcacaattttgggcagagtcacaaaacgtcttaaagagagcgatatgatcgtgactcaacctagt 52691158  T

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Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 54991581 - 54991486
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  54991581 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 54991486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 32221163 - 32221217
Alignment:
Q  303 gtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||  ||||||||||||||||||||||||| || ||||||||    
T  32221163 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaatttcggtagata 32221217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 411 - 586
Target Start/End: Original strand, 33463494 - 33463668
Alignment:
Q  411 aaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattttgttgtaccaaaattaaaacaaggataaatcaggc 510  Q
    |||||||||| ||||||||| ||||    || ||| |||||  |||| ||||||||||||  ||| ||||| ||| ||| ||||||||||||||||| ||    
T  33463494 aaaaacaacaattttaagacgtttcctattgttatatctaccaaagagattacttattgaactttcgttgttccataat-aaaacaaggataaatcaagc 33463592  T
Q  511 tataaaaatacatattttggactg-atataatgaagtgattgttgttataac-aacgacaataagagattcacatatc 586  Q
    | || ||||||  ||||| ||||| | | ||||||||| ||||||||||||| ||| ||| ||||| |||||||||||    
T  33463593 tttagaaatac--atttttgactgaaaaaaatgaagtgtttgttgttataacaaacaacactaagaaattcacatatc 33463668  T

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Target: chr4; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 41817044 - 41816935
Alignment:
Q  68 gaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtac 167  Q
    ||||| |||||||| ||||||| | |||||||| |||||||| | ||||| || || |||| |||     |||||||  |||||||||||||||||||||    
T  41817044 gaatgatggtaacatcatattttaatggtctcaacaccataatagagtggtaataacaccacatt-----ggtttcaacattaaagagtggtcttagtac 41816950  T
Q  168 catatttgagggtgt 182  Q
    |||||| ||||||||    
T  41816949 catattagagggtgt 41816935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 6070620 - 6070563
Alignment:
Q  299 aaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagat 356  Q
    |||| |||||||||||||||  ||||| |||||||| |||||||||||||||||||||    
T  6070620 aaacatcttaaagagagcgatctggtcatgactcaatctagtaacaactttggtagat 6070563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 228
Target Start/End: Complemental strand, 23093425 - 23093214
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagct-agaatggtggtaacaccatatttgagtggtctcagcaccataa 109  Q
    |||| ||| ||| |||||||  |||| ||| |||||||||| || ||||||||| | |||||| || |||||| |||||   ||||||| ||||||||||    
T  23093425 atcaccattttttagcggtcgcagtgtcatattgatattttagagaacttaaaggttagaatgatgataacactatattctggtggtcttagcaccataa 23093326  T
Q  110 caaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggtttt-ctacagtgc 208  Q
     | |||||  |||||||||||||||||| ||       ||||||||||||||||||| |||||  ||  |||||||||| ||| |||||| ||||  |||    
T  23093325 tagagtggttacaataccatattaaagtagt-------ttaaagagtggtcttagtatcatatcgga-tgtgtaaatcttgaatggttttcctactatgc 23093234  T
Q  209 agtagttaaccgcacagttg 228  Q
    | || |||||| ||||||||    
T  23093233 aatatttaaccacacagttg 23093214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 357
Target Start/End: Complemental strand, 32545293 - 32545069
Alignment:
Q  137 tggtttcagtattaaagagtg--gtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatg 234  Q
    |||||||||||||||| || |  ||||||||| |||||| |||  ||||| ||||||||| ||   ||||||||||||||||  |||||| |||||| ||    
T  32545293 tggtttcagtattaaatagagcagtcttagtaacatattggagt-tgtaattctcgaacgattaattacagtgcagtagttagtcgcacaattgtagttg 32545195  T
Q  235 aacttgttttatcctggaggtggcgtgg-tgatagtctgccttg-cacaa--tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgac 330  Q
    | ||||||||||| ||||     ||||| |||||||||| |||| |||||  ||| ||  ||||||| |||| ||||||| |||  ||  || |||||||    
T  32545194 agcttgttttatcatggatacaacgtggttgatagtctgtcttgacacaatttttaggcggtgccacgaaacatcttaaa-agattgacctgatcgtgac 32545096  T
Q  331 tcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||||  |||||||    
T  32545095 tcaacctagtaacaacttcagtagata 32545069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 13695254 - 13695159
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||| ||||||||| |||||  |||||||||||||    
T  13695254 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgactca 13695159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 13710763 - 13710669
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||| | |||||||||||||    
T  13710763 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcg-actggtcgtgactca 13710669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 21304953 - 21305048
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | ||| |||||||||| |||||  |||||||||||||    
T  21304953 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaaagtcttaaagaaagcgacctggtcgtgactca 21305048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 411 - 612
Target Start/End: Complemental strand, 39319572 - 39319372
Alignment:
Q  411 aaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattttgttgtaccaaaattaaaacaaggataaatcaggc 510  Q
    |||||||||| ||||||||  |||||| ||||||||||||| ||| ||||||||||||||| |||  |||| || ||| || || |||||||||  | ||    
T  39319572 aaaaacaacaattttaagatgtttcga-ctgctatgtctaccgaaaaaattacttattgaggtttcattgttcctaaa-tacaagaaggataaaaaaagc 39319475  T
Q  511 tataaaaatacatattttggactg-atataatgaagtgattgttgttataacaacgacaataa-gagattcacatatccgaatcagaatctgtttaaaat 608  Q
    |||| |||||| |  |||  |||| |  ||||||||||||||||||||||||||| |||  || || |||||||||| ||| |  |||| ||||| ||||    
T  39319474 tatagaaatacgt-ctttatactgaacgtaatgaagtgattgttgttataacaacaacaccaacgaaattcacatatgcgactttgaatatgtttgaaat 39319376  T
Q  609 ttat 612  Q
    ||||    
T  39319375 ttat 39319372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 47046307 - 47046402
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| | |||  |||||||||||||    
T  47046307 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca 47046402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 471
Target Start/End: Complemental strand, 51697883 - 51697789
Alignment:
Q  377 aatttggaaagccaaatacaacagtttggaa-tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgag 471  Q
    |||||||||| |||||||||| |||||| || ||||||||||| | |||||||| ||||| || || ||||||||| |||||| || |||||||||    
T  51697883 aatttggaaatccaaatacaatagtttgaaaatccaaaaacaataattttaagatatttctatatgttatgtctaccgaagaagtt-cttattgag 51697789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 55810154 - 55810234
Alignment:
Q  114 gtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttagtaccatatttgagggtgtaaatctcgaacgg 195  Q
    |||| |||||||| || ||||| |||||||||||||||| ||||||||||||||||||| ||||  |||||| ||||||||||    
T  55810154 gtggtaacaatactatcttaaa-tggtttcagtattaaaagagtggtcttagtaccata-ttgaacgtgtaattctcgaacgg 55810234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 4551295 - 4551242
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaag 64  Q
    ||||||||||||||| |||| ||||||||  ||||||||||||| |||||||||    
T  4551295 atcatcatatttgagtggtcgtagtgccacattgatattttggacaacttaaag 4551242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 52690902 - 52690990
Alignment:
Q  13 catcatatttgagcggtcatagtgccattttgatattttggaaaacttaaa-gctagaatggtggtaacaccatatttgagtggtctca 100  Q
    |||| |||||||| |||| |||| |||| | |||||||||||||| ||||| | ||||||| || |||||| ||| |||||||||||||    
T  52690902 catcgtatttgagtggtcgtagtaccatatcgatattttggaaaagttaaatgttagaatgatgataacacaataattgagtggtctca 52690990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 1151334 - 1151409
Alignment:
Q  274 cttgcacaatttggg-tagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    |||||||||||| || ||||| ||  ||||||||||||||||| ||  || ||| |||||||||||||||||||||    
T  1151334 cttgcacaattttggatagtgtcatgaaacgtcttaaagagagtgatctgatcgcgactcaacctagtaacaactt 1151409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 42316543 - 42316606
Alignment:
Q  69 aatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatatt 132  Q
    ||||||| ||| |||||||||||||||| |||||||||||| | ||| || |||||| ||||||    
T  42316543 aatggtgataataccatatttgagtggtatcagcaccataatagagttgccacaataacatatt 42316606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 9362548 - 9362416
Alignment:
Q  121 caataccatattaaagtggtttcagtattaaa---gagtggtcttagta-ccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagtta 216  Q
    ||||||||||||| |||| ||  | |||||||   ||||||||||| || |||||||| |  |||||| ||| ||| ||||  ||| |||||||||||||    
T  9362548 caataccatattagagtgattataatattaaatccgagtggtcttaatagccatatttaaatgtgtaagtcttgaatggttagctatagtgcagtagtta 9362449  T
Q  217 accgcacagttgtagatgaacttgttttatcct 249  Q
    | ||||||||| ||| || |||| |||||||||    
T  9362448 atcgcacagttttagctggacttattttatcct 9362416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 16595933 - 16596014
Alignment:
Q  238 ttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggt-agtgccacaaaacgtcttaaagagagcga 318  Q
    |||||||||||||| |  | |||||| || ||||||| ||||||||||| ||  |||||||||||||||||||||||||||||    
T  16595933 ttgttttatcctggggacgtcgtggttgacagtctgc-ttgcacaattttggacagtgccacaaaacgtcttaaagagagcga 16596014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 8693681 - 8693636
Alignment:
Q  377 aatttggaaagccaaatacaacagtttg-gaatccaaaaacaacag 421  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||    
T  8693681 aatttggaaatccaaatacaacagtttgaaaatccaaaaacaacag 8693636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 10318845 - 10318878
Alignment:
Q  303 gtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||| |||||||||||||||||    
T  10318845 gtcttaaagagagcgacatggtcgtgactcaacc 10318878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 30564442 - 30564495
Alignment:
Q  266 tagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcga 318  Q
    |||||| |||||||||| ||||||||||||| | |||||||||| |||||||||    
T  30564442 tagtctaccttgcacaaatttgggtagtgccgcgaaacgtcttacagagagcga 30564495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 39217187 - 39217272
Alignment:
Q  16 catatttgagcggtcatagtgccattttgatattttggaaaacttaaagct-agaatggtggtaacaccatatttgagtggtctca 100  Q
    |||||||||  |||| |||| |||| ||||||||||||| || |||||  | |||||| | | |||||||||||||||||||||||    
T  39217187 catatttgaatggtcgtagtaccatattgatattttggagaagttaaaattcagaatgatcgaaacaccatatttgagtggtctca 39217272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 37264689 - 37264733
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||    
T  37264689 aatttggaaatccaaatacaacagtttggaaattcaaaaacaaca 37264733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 225; Significance: 1e-123; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 29167745 - 29168093
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||| |||||||||||||||| |||||||||||||||||    
T  29167745 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtgttaacaccatatttgagcggtctcagcaccataac 29167844  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||    
T  29167845 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacagtgcag 29167944  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || |||||||||| ||  |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||    
T  29167945 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctta 29168044  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  29168045 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 29168093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 26667595 - 26667247
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||  | || |||||||| || |||| | ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  26667595 atcaccatatttgagtggttgtggtaccattttggtagtttgtagaacttaaagttagaatggtgttaacaccatatttgagtggtctcagcaccataac 26667496  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||| |||||||    
T  26667495 agagtgataacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctagagtgcag 26667396  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || ||||||| || || ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||    
T  26667395 tagttaatcgaacagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctta 26667296  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  26667295 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 26667247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 26939192 - 26938844
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||  | || |||||||| || |||| | ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  26939192 atcaccatatttgagtggttgtggtaccattttggtagtttgtagaacttaaagttagaatggtgttaacaccatatttgagtggtctcagcaccataac 26939093  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||| |||||||    
T  26939092 agagtgataacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctagagtgcag 26938993  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || ||||||| || || ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||    
T  26938992 tagttaatcgaacagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctta 26938893  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  26938892 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 26938844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 18 - 357
Target Start/End: Original strand, 10759600 - 10759939
Alignment:
Q  18 tatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtgg 117  Q
    |||||||| | || ||||||||| ||||| ||||||| || |||||| |||||||||||||||| |||||||||||||||||| |||||||||| |||||    
T  10759600 tatttgagtgctcgtagtgccatattgatgttttggagaaattaaagttagaatggtggtaacatcatatttgagtggtctcaacaccataacagagtgg 10759699  T
Q  118 caacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaa 217  Q
     |||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||||||    
T  10759700 taacaataccacattaaagtggtttcagtatgacagagtggtcttagtaccatatttgagggtataattctcgaacggttttctaccgtgca-tagttaa 10759798  T
Q  218 ccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagag 315  Q
    ||||||||||||| |||  |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  10759799 ccgcacagttgtaaatgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaa-agag 10759897  T
Q  316 cgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||  |||||||||||||||||||||||||||| ||||||||    
T  10759898 cgacctggtcgtgactcaacctagtaacaacttcggtagata 10759939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 66 - 471
Target Start/End: Complemental strand, 561730 - 561342
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   |||||  |||||||||||||     ||||||||||||| ||||||||||||||    
T  561730 tagaatggtggtaacaccatatttgagtggtctcaacaccataattgagtggttacaataccatatt-----ggtttcagtattatagagtggtcttagt 561636  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||||||||| || |||||||||| ||| |||||||||||||||||| ||||||| ||    
T  561635 accatatttggaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttg 561536  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttt 363  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| |        
T  561535 atagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataat---- 561440  T
Q  364 ttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaatta 462  Q
                 |||||||||| ||||||||||| |||||| ||||||||||||||| ||||||||| |||||||||||||||||||| |||||| |||    
T  561439 -----------agaatttggaaatccaaatacaactgtttggaaatccaaaaacaacaattttaagacgtttcgatctgctatgtctaccgaagaagtta 561351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 33 - 357
Target Start/End: Complemental strand, 12103326 - 12103000
Alignment:
Q  33 agtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatatt 132  Q
    |||||||| ||||| ||||||| || |||||| ||||||||||| |||||||||||||||||||||||  ||||||||| ||||| ||||||||||| ||    
T  12103326 agtgccatattgatgttttggagaaattaaagttagaatggtggcaacaccatatttgagtggtctcaataccataacagagtggtaacaataccatttt 12103227  T
Q  133 aaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtaga 232  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||||| ||||||     
T  12103226 aaagtggtttcagtattaaagagtgatcttagtaccatatttaagggtgtaattctcgaacgattttctacagtgcagtagttaatcgcacatttgtagt 12103127  T
Q  233 tgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgac 330  Q
    ||  |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||  ||||||| ||    
T  12103126 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtaac 12103027  T
Q  331 tcaacctagtaacaactttggtagata 357  Q
    |||||||||||||||||| ||||||||    
T  12103026 tcaacctagtaacaacttcggtagata 12103000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 35679648 - 35679994
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| | || ||||||||| ||||| ||||||| || |||||| ||||||||||||||||||||||||||||||||| | |||||||||    
T  35679648 atcaccatatttgagtgatcgtagtgccatattgatgttttggagaaattaaagttagaatggtggtaacaccatatttgagtggtctgaacaccataac 35679747  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||     
T  35679748 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacgattttctacaatgca- 35679846  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||| |||||||||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||| ||| |  |||||||| ||||||||||    
T  35679847 tagttaactgcacagttgtagttgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaatttttgacagtgccacgaaacgtctta 35679946  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  | | | |||||||||||||||||| ||| ||||||||    
T  35679947 aagagagcgacct-gccatgactcaacctagtaacagcttcggtagata 35679994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 36423960 - 36423612
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  36423960 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtgttaataccatatttgagtggtctcagcaccataac 36423861  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||||| ||||||||||||||     
T  36423860 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagcaccatatttggaggtgtaattctcgaacgattttctacagtgcat 36423761  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| |  ||||| |||| ||  |||||||||| ||||||| ||||||| |||||||||||||||||||| |||||| |||||| | ||||||||||    
T  36423760 tagttaatcaaacagtagtagctgggcttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtctta 36423661  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||| ||||||||||||||||||||| ||||||||    
T  36423660 aagagagcgacctggtcgcgactcaacctagtaacaacttcggtagata 36423612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 37248576 - 37248915
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  37248576 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtgttaacaccatatttgagtggtctcagcaccataac 37248675  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||    
T  37248676 agagtggtaa--------tattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctatagtacag 37248767  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    || ||||||||||||||| || ||  |||||||||||||||||| ||||||| |||||||||||||||||||| ||| ||||||||||| ||| ||||||    
T  37248768 ta-ttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtctta 37248866  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  37248867 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 37248915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 18 - 357
Target Start/End: Complemental strand, 7452070 - 7451733
Alignment:
Q  18 tatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtgg 117  Q
    |||||||| |||| ||||||||| ||||  ||||||| || |||||| ||||||||||| ||||||||||||||||||||||| |||||||||| |||||    
T  7452070 tatttgagtggtcgtagtgccatattgaagttttggagaaattaaagttagaatggtggcaacaccatatttgagtggtctcaacaccataacagagtgg 7451971  T
Q  118 caacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaa 217  Q
      |||||||||||     ||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||||||||    
T  7451970 ttacaataccatag----gtggtttcagtattaaagagtggtcttagtaccatatttggaggtgtaattctcgaacggttttctacagtgtagtagttaa 7451875  T
Q  218 ccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagag 315  Q
    ||||||||||| || ||| ||||||||||||||||||  |||||| |||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  7451874 ccgcacagttgcagctgagcttgttttatcctggaggcagcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagag 7451775  T
Q  316 cgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||  |||||||||||||||||||||||||||| ||||||||    
T  7451774 cgacctggtcgtgactcaacctagtaacaacttcggtagata 7451733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 36429032 - 36428684
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| ||||||||||  ||| || | |||| |||||| |||||| ||||||||| |||||||||| ||||| |||||||||||||||||| ||| |||||    
T  36429032 atcaccatatttgagttgtcgtattaccatattgatagtttggagaacttaaagttagaatggtgttaacatcatatttgagtggtctcaacactataac 36428933  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| |||||| || |||||||||||||||    
T  36428932 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagaaccatatttggaggtgtaattctcgagcgattttctacagtgcag 36428833  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || |||||||||| ||  |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||| || ||||||||||||    
T  36428832 tagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacgtctta 36428733  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| | ||||||    
T  36428732 aagagagcgacctggtcgtgactcaacctagtaacaacttcgttagata 36428684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 345
Target Start/End: Original strand, 20180835 - 20181171
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| ||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20180835 atcaccatatttgagtggtcgtagtaccatattgatattttggagaaattaaagttagaatggtggcaacaccatatttgagtggtctcagcaccataac 20180934  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | | ||| | ||||||| |||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||    
T  20180935 agaatggtagcaataccgtattaaagtggtttcaatattaaagagtggtcttggtatcatatttgagggtgtaaatctcgaacagttttctacagtgcag 20181034  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||||| |||||| ||| ||||||||||| |||||||||||||| | |||||||| |||||| || |||||  | |||||| ||||||||||    
T  20181035 tagttaaccgcacaattgtagttgagcttgttttatcatggaggtggcgtggttaatagtctgtcttgcataattttggacaatgccacgaaacgtctta 20181134  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaa 345  Q
    ||||||| ||  |||||||||||||||||| ||||||    
T  20181135 aagagagtgacctggtcgtgactcaacctaataacaa 20181171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 66 - 471
Target Start/End: Complemental strand, 39523316 - 39522923
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| |||| | ||||||||||||||||||||||||||||||||||||||||    
T  39523316 tagaatggtggtaacaccatatttgagtggtctcagcaccatat-agagtggtaacagtgccatattaaagtggtttcagtattaaagagtggtcttagt 39523218  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    ||||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| ||||||| ||    
T  39523217 accatatttggaggtgtaattcttgaacggttttctacagtgcagtagttaaccgcacagttgcagctggacttgttttatcctggaggcggcgtggttg 39523118  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttt 363  Q
    |||||||| ||||||||| ||||||  ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| | |||||| |        
T  39523117 atagtctgtcttgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataat---- 39523022  T
Q  364 ttcnnnnnnnnttaatttggaaagccaaatac-aacagtttgg-aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaatt 461  Q
                 |||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||| ||| |  ||||||||||||| |||||| ||    
T  39523021 -----------agaatttggaaatccaaatactaacagtttggaaatccaaaaacaacaattttaagacgtttggtactgctatgtctaccgaagaagtt 39522933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 556958 - 556670
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   |||||  |||||||||||||     ||||||||||||| ||||||||||||||    
T  556958 tagaatggtggtaacaccatatttgagtggtctcaacaccataattgagtggttacaataccatatt-----ggtttcagtattatagagtggtcttagt 556864  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||||||||| || |||||||||| ||| |||||||||||||||||| ||||||| ||    
T  556863 accatatttggaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttg 556764  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  556763 atagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 556670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 39518677 - 39518385
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| |||| | ||||||||||||||||||||||||||||||||||||||||    
T  39518677 tagaatggtggtaacaccatatttgagtggtctcagcaccatat-agagtggtaacagtgccatattaaagtggtttcagtattaaagagtggtcttagt 39518579  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    ||||||||||  ||||||| ||| ||||||||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||| ||||||| ||    
T  39518578 accatatttggaggtgtaattcttgaacggttttctacactgcagtagttaaccgcacagttgcagctggacttgttttatcctggaggcggcgtggttg 39518479  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||| ||||||| ||||||  ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| | ||||||    
T  39518478 atagtctgccatgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagata 39518385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 40148218 - 40147870
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||  ||||||||| ||||| ||||||| || |||||| |||||||| || |||||||||||| |||||||||| |||||||||    
T  40148218 atcaccatatttgagtggttgtagtgccatattgatgttttggagaaattaaagttagaatgggggcaacaccatatttaagtggtctcaacaccataac 40148119  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||||||||||||| ||    
T  40148118 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcgtagtaccatatttggaggtgtaattctcgaacggttttctacagtgtag 40148019  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||  | ||| ||| || ||| ||| |||||||||||||| ||||||| |||||||||| ||||||||| |||||| |||||||| |||| |||||    
T  40148018 tagttaattgaacaattgaagctgagcttattttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatctta 40147919  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  || || |||||||||||| ||||||||| | ||||||    
T  40147918 aagagagcgacctgatcatgactcaacctaataacaacttcgatagata 40147870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 69 - 357
Target Start/End: Original strand, 6155249 - 6155539
Alignment:
Q  69 aatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtacc 168  Q
    |||| ||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6155249 aatgttggtaacaccatatttgagtggtctcaacaccataacagagtggtaacaataccaaattaaagtggtttcagtattaaagagtggtcttagtacc 6155348  T
Q  169 atatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgata 267  Q
    |||||||  ||||||| |||||||||||||||||||||||||||||||| || |||||||||| ||  |||||||||||||||||| || |||| |||||    
T  6155349 atatttggaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggtgtggttgata 6155448  T
Q  268 gtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||| |||| | || |||||  |||||||| ||||||||||||||||||||  || |||||||||||||||||||||| || ||||||||    
T  6155449 gtctgtcttgtaaaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacctagtaacaatttcggtagata 6155539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 83 - 357
Target Start/End: Original strand, 6514444 - 6514721
Alignment:
Q  83 catatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttagtaccatatttgagggtg 181  Q
    ||||||||||||||||||||||||||||| ||||| |||||||| |||| |||||||||||| ||||||| ||||||| |||||||||||||||| ||||    
T  6514444 catatttgagtggtctcagcaccataacagagtggtaacaatacaatatcaaagtggtttcaatattaaaagagtggttttagtaccatatttgaaggtg 6514543  T
Q  182 taaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcac 280  Q
    ||||||||||| | ||||||||| |||||||||||||| ||||||||||| | | |||||||||||||||||| ||||||| |||||||||||||||||     
T  6514544 taaatctcgaatgattttctacaatgcagtagttaaccacacagttgtagctaagcttgttttatcctggaggcggcgtggttgatagtctgccttgcaa 6514643  T
Q  281 aa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    || |||||| |||||||| ||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||    
T  6514644 aattttgggcagtgccacgaaacgtcttaaagagagtgacttggtcgtgactcaacctagtaacaactttggtagata 6514721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 77 - 357
Target Start/End: Original strand, 12501737 - 12502019
Alignment:
Q  77 taacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttga 176  Q
    |||||||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||||| |||||||| ||||||||||||| ||||||||     
T  12501737 taacaccatatttgagtggtctcaacaccataacagagtggtaacagtaccatattaaagtggtttcggtattaaatagtggtcttagtatcatatttgg 12501836  T
Q  177 gggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgcct 275  Q
     ||||||| ||||||||| ||||||||||||||||||||||||| |||||||||| ||  |||||||||||||||||| ||||||| ||||||||||  |    
T  12501837 aggtgtaattctcgaacgattttctacagtgcagtagttaaccgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgttt 12501936  T
Q  276 tgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||| |||||| |||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||||  |||||||    
T  12501937 tgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcatgactcaacctagtaacaacttcagtagata 12502019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 66 - 471
Target Start/End: Complemental strand, 42001692 - 42001309
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   |||||  |||||||||||||     ||||||||| ||||| || |||||||||    
T  42001692 tagaatggtggtaacaccatatttgagtggtctcaacaccataattgagtggttacaataccatatt-----ggtttcagtgttaaaagattggtcttag 42001598  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt- 263  Q
    ||||||||| || ||||||| |||||||||||||||||||||     |||||||||||||||||||| ||  |||||||||||||||||| ||||||||     
T  42001597 taccatatt-gaaggtgtaattctcgaacggttttctacagt-----agttaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggtt 42001504  T
Q  264 gatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctt 362  Q
    ||||||||| ||| |||||||| ||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| |       
T  42001503 gatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataat--- 42001407  T
Q  363 tttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaatt 461  Q
                  |||||||||| ||||||||||| |||||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  42001406 ------------agaatttggaaatccaaatacaactgtttggaaatccaaaaacaacaattttaaaacatttcgatctgctatgtctaccgaagaaatt 42001319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 65 - 560
Target Start/End: Original strand, 11981106 - 11981589
Alignment:
Q  65 ctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtctta 163  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || | ||||| ||||||||||||||||||||||||| ||||| ||||| |||||||     
T  11981106 ctagaatgatggtaacaccatatttgagtggtctcatcaccacaatagagtggtaacaataccatattaaagtggtttcggtattaaaagaatggtcttg 11981205  T
Q  164 gtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg- 262  Q
    |||||||||| || ||||||| |||||||||||||||||||||||| ||||||| || |||||||||||||  |||||||||| ||||||| |||||||     
T  11981206 gtaccatattaga-ggtgtaattctcgaacggttttctacagtgcaatagttaatcgaacagttgtagatgtgcttgttttattctggaggcggcgtggt 11981304  T
Q  263 tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgt-gactcaacctagtaacaactttggtagatattc 360  Q
    ||||  |||| ||||||||| |||||| ||||||||||||||||||||||| |||||  ||||| |  | |||||||||||||||||| |||||||| |     
T  11981305 tgat--tctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagaaagcgacctggtcataaaatcaacctagtaacaacttcggtagataat- 11981401  T
Q  361 tttttcnnnnnnnnttaatttggaaagccaaatacaacagtttg-gaatcc--aaaaacaacagttttaagacatttcgatctgctatgtctacagaaga 457  Q
                    |||||||||| |||| ||||||||||||  |||||  |||||||||| ||||||||  ||||   |||||| |||||| | |||    
T  11981402 --------------agaatttggaaatccaactacaacagtttgaaaatccaaaaaaacaacaattttaagatgtttcctactgctacgtctaccgtaga 11981487  T
Q  458 aattacttattgagattttgttgtaccaaaattaaaacaaggataaatcaggctataaaaatacatattttggactgatataatgaagtgattgttgtta 557  Q
    |||||||||||||||||| ||||| |||||| |||||| |||||||||||| || || ||||||||  ||| |||||| | |||||||||||||||||||    
T  11981488 aattacttattgagatttcgttgtcccaaaaataaaactaggataaatcagactttagaaatacat-ctttcgactgaaacaatgaagtgattgttgtta 11981586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 66 - 357
Target Start/End: Original strand, 36942097 - 36942385
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| || |||||   |||||  |||||||||||||     ||||||||||||||| || |||||||||    
T  36942097 tagaatggtggtaacaccatatttgagtggtctcaacatcataattgagtggttacaataccatatt-----ggtttcagtattaaaagattggtcttag 36942191  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||| || |||||||||| ||  |||||||||||||||||| ||||||| |    
T  36942192 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggtt 36942290  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||||| |||||| |||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  36942291 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 36942385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 66 - 335
Target Start/End: Original strand, 32461381 - 32461647
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | |||||  | | |||||||||     |||||||| |||||| ||||||||||||    
T  32461381 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagagtggtcatagtaccatatt-----ggtttcagcattaaaagagtggtcttag 32461475  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| |    
T  32461476 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctgaacttgttttatcctggaggcggcgtggtt 32461574  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaac 335  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  32461575 gatagtctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaac 32461647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 66 - 357
Target Start/End: Original strand, 36937343 - 36937631
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| || |||||   |||||  |||||||||||||     ||||||||||||||| || |||||||||    
T  36937343 tagaatggtggtaacaccatatttgagtggtctcaacatcataattgagtggttacaataccatatt-----ggtttcagtattaaaagattggtcttag 36937437  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||| || |||||||||| ||  |||||||||||||||||| ||||||| |    
T  36937438 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggtt 36937536  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||||| |||||| |||||||  ||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  36937537 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctaataacaacttcggtagata 36937631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 49 - 365
Target Start/End: Original strand, 12102639 - 12102959
Alignment:
Q  49 tttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagca-ccataacaaagtggcaacaataccatattaaagtggtttcagta 147  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||||||||||  | |||||||| ||||| ||||||  |||||||||||||||||||||    
T  12102639 tttggagaacttaaagttagaatggtggtaacaccatatttaagtggtctcaaaaaccataacagagtggtaacaatgtcatattaaagtggtttcagta 12102738  T
Q  148 ttaaagagtggtcttag----taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttt 243  Q
    |||||||||||||||||    ||||||||||||||||| ||||| | |||||||||||||   | ||||||||||||||||||||||| ||  |||||||    
T  12102739 ttaaagagtggtcttagtacataccatatttgagggtgaaaatcccaaacggttttctac---gtagtagttaaccgcacagttgtagttggtcttgttt 12102835  T
Q  244 tatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagta 341  Q
    |||||||| |  || |||| ||||||||| |||||||||| |||||  |||||||||||| ||||||||||||||||  | |||||||||||||||||||    
T  12102836 tatcctggtgacggtgtggttgatagtcttccttgcacaattttggccagtgccacaaaaagtcttaaagagagcgacctagtcgtgactcaacctagta 12102935  T
Q  342 acaactttggtagatattcttttt 365  Q
    ||||||| ||||||| || |||||    
T  12102936 acaacttcggtagatgttgttttt 12102959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 66 - 357
Target Start/End: Original strand, 12044971 - 12045259
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||| |||||||||||||||||||| |||||||| |||||||| | |||||| | | |||||||||     ||||||||||||||| ||||||||||||    
T  12044971 tagaaaggtggtaacaccatatttgattggtctcaacaccataatagagtggccatagtaccatatt-----ggtttcagtattaaaagagtggtcttag 12045065  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt- 263  Q
    ||||||||| || ||||||| |||||||||||  ||||||||||||||||||||||||||||||||| |   |||||||||||||||||| ||||||||     
T  12045066 taccatatt-gaaggtgtaattctcgaacggtagtctacagtgcagtagttaaccgcacagttgtagctatgcttgttttatcctggaggcggcgtggtc 12045164  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||| ||||||||| |||||| |||||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||    
T  12045165 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagggcgacctggtcgtgactcaacctagtaacaacttcggtagata 12045259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 125 - 357
Target Start/End: Original strand, 41587048 - 41587280
Alignment:
Q  125 accatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcaca 224  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  41587048 accatattaaagtggtttcagtgttaaagagtggtcttagtaccatatttgagggtgtaattc--gaacggttttctacagtgcagtagttaaccgcaca 41587145  T
Q  225 gttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatg 322  Q
    ||||||| ||| |||||||||||||||||| ||||||| |||||||||| ||||||||| ||||   |||| ||| |||||||||||||||||| |  ||    
T  41587146 gttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgaacagtgtcacgaaacgtcttaaagagagcaacctg 41587245  T
Q  323 gtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||| ||||||||||||| ||||||||    
T  41587246 gtcgtgactcaaactagtaacaacttcggtagata 41587280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 41996923 - 41996640
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   |||||  |||||||||||||     ||||||||| ||||| || |||||||||    
T  41996923 tagaatggtggtaacaccatatttgagtggtctcaacaccataattgagtggttacaataccatatt-----ggtttcagtgttaaaagattggtcttag 41996829  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt- 263  Q
    ||||||||| || ||||||| |||||||||||||||||||||     |||||||||||||||||||| ||  |||||||||||||||||| ||||||||     
T  41996828 taccatatt-gaaggtgtaattctcgaacggttttctacagt-----agttaaccgcacagttgtagttgggcttgttttatcctggaggcggcgtggtt 41996735  T
Q  264 gatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||| ||| |||||||| ||| |||||||| |||||||||||||||||| |  |||||||||||||||||||||||||||| ||||||||    
T  41996734 gatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcaacctggtcgtgactcaacctagtaacaacttcggtagata 41996640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 137 - 355
Target Start/End: Complemental strand, 3666129 - 3665909
Alignment:
Q  137 tggtttcagtattaaa-gagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatga 235  Q
    |||||||||||||||| ||||||| ||||||||||||| || ||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||     
T  3666129 tggtttcagtattaaaagagtggtattagtaccatatt-gaaggtgtaattcccgaacggttttctacagtgcagtagttaaccgcacagttgtagttgg 3666031  T
Q  236 acttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||| |||||| |||||||| ||||||||| ||||||||||  | |||||||||||    
T  3666030 acttgttttatcctagaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgacctagtcgtgactca 3665931  T
Q  334 acctagtaacaactttggtaga 355  Q
    ||||||||||||||| ||||||    
T  3665930 acctagtaacaacttcggtaga 3665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 16 - 366
Target Start/End: Original strand, 15414658 - 15415010
Alignment:
Q  16 catatttgagcggtcatagtgccattttgatattttggaaaacttaaa-gctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaag 114  Q
    |||||||||| |||| |||| |||| ||||||||||| | |||||||| | |||||||||| ||||||||||||| |||||||  | |||||||||| ||    
T  15414658 catatttgagtggtcgtagtaccatattgatattttgaagaacttaaatgttagaatggtgataacaccatattttagtggtcataacaccataacagag 15414757  T
Q  115 tggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagt 214  Q
    |||  |   |||||||||| |||| ||  ||||||||||| ||||||||||| |||||| |||| ||||||| ||||| ||||||||| |||||||||||    
T  15414758 tggtcaaggtaccatattagagtgattctagtattaaagattggtcttagtagcatattggagg-tgtaaatttcgaaaggttttctatagtgcagtagt 15414856  T
Q  215 taaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaaga 312  Q
    |||||||||| ||  |  || |||||  |||||||||||| |||||||| |||| |||||||  |||||||| ||| |||||||||||||| ||||||||    
T  15414857 taaccgcacatttacatgtggacttgcattatcctggaggcggcgtggttgatattctgcctcacacaattttgggcagtgccacaaaacgacttaaaga 15414956  T
Q  313 gagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttc 366  Q
    |||||   | |||||||||||||| |||||||||||  ||| ||||||| ||||    
T  15414957 gagcgttctagtcgtgactcaaccaagtaacaacttccgtatatattctatttc 15415010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 79 - 357
Target Start/End: Original strand, 12041772 - 12042054
Alignment:
Q  79 acaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttagtaccatatttgag 177  Q
    ||||||||||||||| |||| |||||||||| | ||||| |||| ||||||||||| ||||||||||||||||| || ||  ||| |||||||||| |||    
T  12041772 acaccatatttgagtagtcttagcaccataatagagtggtaacagtaccatattaatgtggtttcagtattaaaagaatgtacttggtaccatattggag 12041871  T
Q  178 ggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgcctt 276  Q
    | ||||| |||||||| ||||| || |||||||||||||| || |||||||||| || ||||||||||||||||||| ||||||| ||||||| ||||||    
T  12041872 g-tgtaattctcgaacagttttttatagtgcagtagttaatcgaacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtttgcctt 12041970  T
Q  277 gcaca-atttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca--acctagtaacaactttggtagata 357  Q
    ||| |  |||||| |||||||| |||||||||||||||| |||  |||||||||||||  |||||||||||||||  |||||||    
T  12041971 gcatatttttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactcatgacctagtaacaacttcagtagata 12042054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 11 - 348
Target Start/End: Original strand, 16116020 - 16116360
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    ||||||||||||||| |||  |||| |||| |||||| |||| | ||||||||| |||||||||| ||||| |||||||||||||||| | ||||||||     
T  16116020 atcatcatatttgagtggttgtagtaccatattgatagtttgaagaacttaaaggtagaatggtgataacatcatatttgagtggtcttaacaccataat 16116119  T
Q  111 aaagtggca--acaataccatatta--aagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagt 206  Q
    | |||||    ||||||||||||||  ||| |||||||||||||||||||| |  ||||| |||||| || | ||||| ||||||||||||||||| |||    
T  16116120 agagtggtgtcacaataccatattagaaagcggtttcagtattaaagagtgat--tagtatcatattggatg-tgtaattctcgaacggttttctatagt 16116216  T
Q  207 gcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgt 304  Q
    |||||||||||| | || ||||||| |||||||||||||||  ||||||||||||| ||||||| || ||||||||| |||||| |||| ||| ||||||    
T  16116217 gcagtagttaacagtactgttgtagttgaacttgttttatctaggaggtggcgtggttgatagtttgtcttgcacaattttgggcagtgtcacgaaacgt 16116316  T
Q  305 cttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
     |||| |||||| |  | ||||||||| ||||||| ||||||||    
T  16116317 tttaaggagagcaacctagtcgtgacttaacctagcaacaactt 16116360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 66 - 263
Target Start/End: Complemental strand, 4872190 - 4871993
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||| ||||||||||||||||||||| |||| ||||| ||||||| |    
T  4872190 tagaatggtggtaacaccatatttgagtggtcttagcaccataatagagtggtaacagtaccatattaaagtggtttcattattaaaagaatggtctttg 4872091  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt 263  Q
    ||||||| |||| ||| ||| |||| |||||||||||||||| |||||||||| || |||||||||| ||| ||||||||||| |||||| ||||||||    
T  4872090 taccata-ttgaaggtataattctcaaacggttttctacagtacagtagttaatcgaacagttgtagttgagcttgttttatcatggaggcggcgtggt 4871993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 9726518 - 9726678
Alignment:
Q  69 aatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtacc 168  Q
    |||||||| | |||||||||||||||||||||||||||||| | ||||| ||||||||||||| ||| |||||||||||||||||| |||||||| ||||    
T  9726518 aatggtggaatcaccatatttgagtggtctcagcaccataatagagtggtaacaataccatatgaaaatggtttcagtattaaagaatggtcttaatacc 9726617  T
Q  169 atatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgta 230  Q
    |||||| |  ||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  9726618 atattt-aaagtgtaaaccttgaacggttttctacagtgcagtagttaaccgcacagttgta 9726678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 66 - 361
Target Start/End: Complemental strand, 9911412 - 9911124
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    |||||||||||||||| |||||||||||||||| |||||||||  ||||| |  ||||||||||||| |     ||||||||||||| ||||||||||||    
T  9911412 tagaatggtggtaacatcatatttgagtggtcttagcaccatat-aaagttgtcacaataccatattga-----tttcagtattaaaagagtggtcttag 9911319  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg-gt 263  Q
    |||||||||| |   |||   | | ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||| | || | ||||||  |    
T  9911318 taccatatttaa---tgtgtcttttgaacggttttctacagtgcagtaattaaccgcacaattgtagttgaacttgttttatcttaga-gcggcgtgatt 9911223  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattct 361  Q
    | |||||||||  |||||| ||||   |||||||||||| |||||||| ||| ||| || ||| | |||||||||||||||||||| ||||||||||||    
T  9911222 ggtagtctgccccgcacaattttgaacagtgccacaaaatgtcttaaaaagaacgacattgtcctaactcaacctagtaacaacttcggtagatattct 9911124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 42 - 215
Target Start/End: Original strand, 34707341 - 34707513
Alignment:
Q  42 ttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtt 141  Q
    |||||| ||| || ||||||||| |||||| ||| |||||||||||||||||| | | |||||||||||| | ||  ||||||| ||||||||| || ||    
T  34707341 ttgatagttttgagaacttaaagttagaatagtgataacaccatatttgagtgattttagcaccataacagaatgataacaataacatattaaaatgatt 34707440  T
Q  142 tcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagtt 215  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||  ||||| |||||    
T  34707441 tcagtattaaagagtggtcttagtaccatattt-aaggtgtaaatctcgaacggttttctatggtgcaatagtt 34707513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 13301315 - 13301426
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | | ||| | |||||||||||     |||||||||||||||||||||||||||||    
T  13301315 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagaatggtaccaataccatat-----tggtttcagtattaaagagtggtcttagt 13301409  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||||||||    
T  13301410 accatattagagggtgt 13301426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 37652828 - 37652950
Alignment:
Q  237 cttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggt-agtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaa 334  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||  | || ||| ||||||||||||||||||||  || |||||||||||    
T  37652828 cttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttggacaatgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaa 37652927  T
Q  335 cctagtaacaactttggtagata 357  Q
    |||| ||||||||| ||||||||    
T  37652928 cctaataacaacttcggtagata 37652950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 21323799 - 21323910
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| | | ||| |||||||||||||     |||||||||||||||||| ||||||||||    
T  21323799 tagaacggtggtaacaccatatttgagtggtctcaacaccataatagaatggtaacaataccatat-----tggtttcagtattaaagactggtcttagt 21323893  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||||||||    
T  21323894 accatattagagggtgt 21323910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 1429828 - 1429938
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||| | | |||  ||||||||| ||     |||||||| ||||||||| ||||||||||    
T  1429828 tagaatggtggtaacaccatatttgagtggtctcagcaccataa-ataatggtcacaataccacat-----tggtttcaatattaaagaatggtcttagt 1429921  T
Q  166 accatatttgagggtgt 182  Q
    |||||||||||||||||    
T  1429922 accatatttgagggtgt 1429938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 411 - 585
Target Start/End: Original strand, 23977484 - 23977656
Alignment:
Q  411 aaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattttgttgtaccaaaattaaaacaaggataaatcaggc 510  Q
    |||||||||| ||||||||| |||| | ||| ||||||||| |||||||||| |||||||| ||| ||| | || |||| ||||  ||||||||||| ||    
T  23977484 aaaaacaacaattttaagacgtttcaa-ctgatatgtctaccgaagaaattatttattgaggtttcgttatccctaaataaaaa--aggataaatcaagc 23977580  T
Q  511 tataaaaatacatattttggactgatataatgaagtgattgttgttataacaacgacaataa-gagattcacatat 585  Q
    |||| |||||||| |||| |||||| | ||||||||| |||||||||||||||| ||| ||| || ||||||||||    
T  23977581 tatagaaatacatcttttcgactgaaacaatgaagtgtttgttgttataacaacaacactaacgaaattcacatat 23977656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 31731805 - 31731694
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||| |||||||||||||||||||| |||||||| | | ||| |||||||||||||     |||||| ||||||||||||| ||||| ||    
T  31731805 tagaatggtggtaataccatatttgagtggtctcaacaccataatagaatggtaacaataccatat-----tggtttaagtattaaagagtagtcttggt 31731711  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||||||||    
T  31731710 accatattagagggtgt 31731694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 13582690 - 13582785
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| |||||||||||| | ||||||||||||||||||||  |||||||||||||    
T  13582690 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 13582785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 24435869 - 24435964
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||||||| |||||||| |||||||||| |||| ||||||| | ||||||||||||||||||||  |||||||||||||    
T  24435869 tgttttatcctggagacggcgtggttgatagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 24435964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 7805166 - 7805068
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| |||||||||||| | ||||||||||||||||| ||  ||||||||||||||||    
T  7805166 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagggacctggtcgtgactcaacc 7805068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 14374230 - 14374132
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| || ||||||| |||||||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  14374230 tgttttatcctggagacggcgtggttgttagtctaccctgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 14374132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 406 - 471
Target Start/End: Original strand, 36937644 - 36937709
Alignment:
Q  406 aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgag 471  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||  |||||| ||||||||||||    
T  36937644 aatccaaaaacaacaattttaagacgtttcgatctgctatgtctatcgaagaagttacttattgag 36937709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 36253921 - 36253826
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||| |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  36253921 tgttttatcctggaggcggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 36253826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 37550030 - 37550079
Alignment:
Q  237 cttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaattt 285  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37550030 cttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattt 37550079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 24776843 - 24776919
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaa 342  Q
    |||||| |||||||||| || ||||||||| | |||||||||||||| ||||| |||||||||||||| || |||||    
T  24776843 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaa 24776919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 17510153 - 17510058
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  17510153 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 17510058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 3666173 - 3666131
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccata 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  3666173 tagaatggtggtaacaccatatttgagtggtctcagcatcata 3666131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 37549925 - 37550014
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctca 100  Q
    |||| ||||||| || |||| |||| |||| |||||| ||| || ||||||||| ||||||| |  ||||||||||||||||||||||||    
T  37549925 atcaccatatttaagtggtcgtagtaccatattgatagtttagagaacttaaagttagaatgatattaacaccatatttgagtggtctca 37550014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 37652723 - 37652812
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctca 100  Q
    |||| ||||||| || |||| |||| |||| |||||| ||| || ||||||||| ||||||| |  ||||||||||||||||||||||||    
T  37652723 atcaccatatttaagtggtcgtagtaccatattgatagtttagagaacttaaagttagaatgatattaacaccatatttgagtggtctca 37652812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 333
Target Start/End: Original strand, 24771356 - 24771452
Alignment:
Q  238 ttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    ||||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||| ||||||||| |||||  |||||||||||||    
T  24771356 ttgttttatcctggagacggcgcggttgttagtctaccttgcacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgactca 24771452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 42019640 - 42019573
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  42019640 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 42019573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 26709199 - 26709102
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcaca--atttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    ||||||||||||||| || || ||| | |||||| |||||||||  |||| ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  26709199 tgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 26709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 26978933 - 26978836
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcaca--atttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    ||||||||||||||| || || ||| | |||||| |||||||||  |||| ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  26978933 tgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 26978836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 1414050 - 1414155
Alignment:
Q  238 ttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||| |||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  || |||||||||| ||    
T  1414050 ttgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcaccc 1414149  T
Q  337 tagtaa 342  Q
     |||||    
T  1414150 cagtaa 1414155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 6513703 - 6513768
Alignment:
Q  16 catatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaaca 81  Q
    |||||||||| |||| ||||||||| |||||| |||||| || | |||| ||||||||||||||||    
T  6513703 catatttgagtggtcgtagtgccatattgatactttggagaaatgaaagttagaatggtggtaaca 6513768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 10759948 - 10759992
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  10759948 aatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 10759992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 39518380 - 39518336
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  39518380 aatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 39518336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 17158573 - 17158456
Alignment:
Q  76 gtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa---gagtggtcttagt-accata 171  Q
    |||||||||| ||||||||||||||  ||||||| ||| |||  | |  ||||| ||| |||||||||| |||||||   || |||||||| | ||||||    
T  17158573 gtaacaccatgtttgagtggtctcaataccataataaaatggtcatataaccatgttagagtggtttcaatattaaatttgaatggtcttaataaccata 17158474  T
Q  172 tttgagggtgtaaatctc 189  Q
    ||||||||||||| ||||    
T  17158473 tttgagggtgtaattctc 17158456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 17505020 - 17504953
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| |||||||||| || ||||||||| | |||||||||||||| | |||  |||||||||||||    
T  17505020 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca 17504953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 41858688 - 41858593
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || |||||||||   |||||||||||||| |||||  || ||||||||||    
T  41858688 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctgatcgtgactca 41858593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 464
Target Start/End: Original strand, 15415026 - 15415084
Alignment:
Q  406 aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattact 464  Q
    ||||||||| ||||| ||||||||| ||||| | ||| |||||||| ||||||||||||    
T  15415026 aatccaaaaccaacaattttaagacgtttcgttttgccatgtctaccgaagaaattact 15415084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 421
Target Start/End: Original strand, 37248920 - 37248965
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaacag 421  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||    
T  37248920 aatttggaaatccaaatataacagtttggaaatccaaaaacaacag 37248965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 556665 - 556621
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||    
T  556665 aatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 556621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 29168098 - 29168142
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||    
T  29168098 aatttggaaattcaaatacaacagtttggaaatccaaaaacaaca 29168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 37652955 - 37652999
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||    
T  37652955 aatttggaaatccaaatacaacaatttggaaatccaaaaacaaca 37652999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 41996635 - 41996591
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||    
T  41996635 aatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 41996591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 225; Significance: 1e-123; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 19798785 - 19799133
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| |||||| |||||| || |||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  19798785 atcaccatatttgagtggtcgtagtgccatattgatactttggagaaattaaagttagaatgggggtaacaccatatttgagttgtctcagcaccataac 19798884  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  19798885 agagtggtaacaataccatattaaagtggttttagtattaaagagtggtcttagtgccatatttgaaggtgtaaatctcgaacggttttctacagtgcag 19798984  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| ||  |||||||||||||||||| ||||||| |||||||||| ||||||||| ||||| ||||||||| ||||||||||    
T  19798985 tagttaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtctta 19799084  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  || ||||||||||||||||||||||||| | ||||||    
T  19799085 aagagagcgatctgatcgtgactcaacctagtaacaacttcgatagata 19799133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 40166303 - 40165955
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| |||||| |||||| || |||||| |||||||||||||||||||||||||||||||||||  |||||||     
T  40166303 atcaccatatttgagtggtcgtagtgccatattgatactttggagaaattaaagttagaatggtggtaacaccatatttgagtggtctcaataccataag 40166204  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||||||||||    
T  40166203 agagtggtaacaatatcatattaaagtggtttcagtattaaagagtggtcttagtaccatattcgaatgtgtaaatttcgaacggttttctacagtgcag 40166104  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcg-tggtgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || | |||||||| ||  ||||||||||||| |||| |||| || || ||||||||||||||||| |||||| |||||||| ||||||||||    
T  40166103 tagttaatcgtatagttgtagttgtgcttgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacgtctta 40166004  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  40166003 aagagagcgacatggtcgtgactcaacctagtaacaacttcggtagata 40165955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 26927494 - 26927842
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||  |||||||||||||||||||||||||| |||||||    
T  26927494 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtattaacaccatatttgagtggtctcagcgccataac 26927593  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||    
T  26927594 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacagtgcag 26927693  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||  | |||||||||| ||  ||||||||||  | |||| ||||||| |||||||||||||||||||| |||||| | |||||| ||||||||||    
T  26927694 tagttaagtgtacagttgtagctgggcttgttttattttagaggcggcgtggttgatagtctgccttgcacaattttgggcaatgccacgaaacgtctta 26927793  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  | |||||||||||||||||||||||||| ||||||||    
T  26927794 aagagagcgacttagtcgtgactcaacctagtaacaacttcggtagata 26927842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 69 - 357
Target Start/End: Original strand, 33301010 - 33301300
Alignment:
Q  69 aatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtacc 168  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||    
T  33301010 aatggtggtaacaccatatttgagtggtctcaacaccataacagagtggtaacaatatcatattaaagtggtttaagtattaacgagtggtcttagtacc 33301109  T
Q  169 atatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgata 267  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  33301110 atatttgaaggtgtaattctcgaacagttttctacagtgcagtagttaaccgcacagttgtagatgaaattgttttatcctggaggcggcgtggttgata 33301209  T
Q  268 gtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||| ||||||||| |||||| |||||||| |||||||||||||||| |||  ||||||||| |||| ||||||||||||||| ||||||    
T  33301210 gtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgattcaagctagtaacaactttgatagata 33301300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 16 - 345
Target Start/End: Original strand, 39588144 - 39588475
Alignment:
Q  16 catatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagt 115  Q
    |||||||||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  39588144 catatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtgttaacaccatatttgagtggtctcagcaccataacagagt 39588243  T
Q  116 ggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagtt 215  Q
    || |||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  39588244 ggtaacaataccatattaaagtggttttagtattaaagattggtctcagtaccatatttggaggtgtaattctcgaacggttttctacactgcagtagtt 39588343  T
Q  216 aaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagag 313  Q
    || || ||| |||||||||| |||| ||||||||||||  |||||||| ||||||||| ||||||||| |||||  |||||||| |||||||||||||||    
T  39588344 aatcgaacaattgtagatgagcttgctttatcctggagtaggcgtggtagatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaagag 39588443  T
Q  314 agcgaaatggtcgtgactcaacctagtaacaa 345  Q
    |||||  || |||||||| |||||||||||||    
T  39588444 agcgacctgatcgtgacttaacctagtaacaa 39588475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 58 - 467
Target Start/End: Original strand, 51041282 - 51041677
Alignment:
Q  58 cttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtg 157  Q
    ||||||| ||||||| |  |||||||||||||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||||| ||||||||||||    
T  51041282 cttaaagttagaatgatattaacaccatatttgagtggtctcaacaccataacagagtggtaacaattccatattaaagtggtttcaatattaaagagtg 51041381  T
Q  158 gtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtgg 257  Q
     |||||||||||||||||  ||| ||  ||||||||| ||||||||||||||||| |||| || |||||||||| ||  ||||||||||| |||||| ||    
T  51041382 atcttagtaccatatttggaggtatagttctcgaacgattttctacagtgcagtaattaatcgaacagttgtagctgggcttgttttatcttggaggcgg 51041481  T
Q  258 cgtgg-tgatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagat 356  Q
    ||||| |||||||||||||||||||||||||| |||||||| |||||||||||| |||||||  ||||||||||||||| |||||||||||| |||||||    
T  51041482 cgtggttgatagtctgccttgcacaatttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactcaacttagtaacaacttcggtagat 51041580  T
Q  357 attctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaa 455  Q
    | |                 |||||||||| ||||||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||||||||| |||    
T  51041581 aat---------------agaatttggaaatccaaatacatcagtttggaaatccaaaaacaacaattttaagacgtttcgatctgctatgtctaccgaa 51041665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 11 - 420
Target Start/End: Complemental strand, 16035930 - 16035528
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||     
T  16035930 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtgataacaccatatttgagtggtctcagcaccataat 16035831  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaa-agagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgca 209  Q
    | ||||| |||||||||||||||||||  ||| | |||||| | | ||||||| |||||||||| || ||||| ||||||||| ||||||||| ||||||    
T  16035830 agagtggtaacaataccatattaaagtcattttaatattaacataatggtcttggtaccatattgga-ggtgt-aatctcgaatggttttctaaagtgca 16035733  T
Q  210 gtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctt 307  Q
    |||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||| |||| ||||||||| |||||  |||||||| |||||| ||    
T  16035732 gtagttaaccacacatttgtagatgagcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaactttggacagtgccacgaaacgtgtt 16035633  T
Q  308 aaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-a 406  Q
    |||||| ||||  |||||||||||||||||||||||||||||||||||||||| ||||           |||||| ||| |||||||||||||||||| |    
T  16035632 aaagagggcgacctggtcgtgactcaacctagtaacaactttggtagatattcattttag---------aatttgaaaatccaaatacaacagtttggaa 16035542  T
Q  407 atccaaaaacaaca 420  Q
    ||||||||||||||    
T  16035541 atccaaaaacaaca 16035528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 16 - 357
Target Start/End: Complemental strand, 38621010 - 38620668
Alignment:
Q  16 catatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagt 115  Q
    |||||||||| | || ||||||||| ||||||||||||| || |||||| ||||||||||  ||||||||||||||||||||| | || ||||||| |||    
T  38621010 catatttgagtgatcgtagtgccatattgatattttggagaaattaaagttagaatggtgaaaacaccatatttgagtggtcttaacatcataacagagt 38620911  T
Q  116 ggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagtt 215  Q
    ||  || |||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||| ||| |||||||||| ||||||||||    
T  38620910 ggtgacgataccatattaaagtgatttcagtattaaagagtggtcttaataccatattttagggtgtaaatctcaaacagttttctacaatgcagtagtt 38620811  T
Q  216 aaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggt-agtgccacaaaacgtcttaaagag 313  Q
    |||||||||||||||| || |||||||||||| |||||| ||||| || |||||||||||||||||||||| ||  | ||| || |||||||||||||||    
T  38620810 aaccgcacagttgtagttggacttgttttatcttggaggcggcgtagttgatagtctgccttgcacaattttggacaatgc-acgaaacgtcttaaagag 38620712  T
Q  314 agcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    || ||  |||||| ||||||||||| ||| ||||| ||||||||    
T  38620711 agtgatctggtcgcgactcaacctaataataacttcggtagata 38620668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 17 - 357
Target Start/End: Complemental strand, 10140409 - 10140064
Alignment:
Q  17 atatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtg 116  Q
    ||||||||  |||| ||||| ||| ||||  ||||||| || |||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  10140409 atatttgaatggtcgtagtggcatattgaagttttggagaaattaaagttagaatggtggcaacaccatatttgagtggtctcaacaccataacaaagtg 10140310  T
Q  117 gcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttc-------tacagtgca 209  Q
    |  |||||||||||     ||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||       |||||||||    
T  10140309 gttacaataccatag----gtggtttcaatattaaagaatggtcttagtaccatatttgagggtgtaattctcgaacggttttcggttttctacagtgca 10140214  T
Q  210 gtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctt 307  Q
    ||||||||||||||||||| || ||  ||||||||||||| |||||||||||| |||| ||||||||||||||| |||| |||||||||| |||||| ||    
T  10140213 gtagttaaccgcacagttgcagctgggcttgttttatcctagaggtggcgtggttgattgtctgccttgcacaattttgagtagtgccacgaaacgtgtt 10140114  T
Q  308 aaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||  || ||||||||||||||||||||||||| ||||||||    
T  10140113 aaagagagcgacctgatcgtgactcaacctagtaacaacttcggtagata 10140064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 66 - 357
Target Start/End: Original strand, 23192645 - 23192937
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||  ||||| ||||||||||| |||||||| | ||||| |||| || |||||||||||||||||||||||||| || ||||||| |    
T  23192645 tagaatggtggtaacattatattcgagtggtctcaacaccataatagagtggtaacagtatcatattaaagtggtttcagtattaaaagaatggtcttgg 23192744  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt- 263  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||||||||| || ||| |||||| ||  |||||||||||||||||| ||||||||     
T  23192745 taccatattggagg-tgtaattctcgaacggttttctacagtgcagtagttaatcgaacaattgtagctgg-cttgttttatcctggaggaggcgtggtt 23192842  T
Q  264 gatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  23192843 gatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 23192937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 11 - 263
Target Start/End: Complemental strand, 25844079 - 25843827
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||  |||| ||||||||| ||||| ||||||| || |||||| ||||||||||  | || |||||||||||||||||| ||||||||     
T  25844079 atcaccatatttgaatggtcgtagtgccatattgatgttttggagaaattaaagttagaatggtgacagcatcatatttgagtggtctcaacaccataag 25843980  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  25843979 agagtggtaacaataccatattaaggtggtttcagtattaaagagtggtcttagtaccatatatgagggtgtaattctcgaacggttttctacagtgcag 25843880  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt 263  Q
    ||||||||||||||||||||| ||  |||||||||| ||||||| ||||||||    
T  25843879 tagttaaccgcacagttgtagctgggcttgttttatactggaggcggcgtggt 25843827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 42 - 342
Target Start/End: Original strand, 47451029 - 47451330
Alignment:
Q  42 ttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtt 141  Q
    |||||| |||||| ||||||||| |||||||| | ||| | ||||||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||    
T  47451029 ttgatagtttggagaacttaaagttagaatggagttaatatcatatttgagtggtctcagcgtcataacagagtggtaacaataccatattaaagtggtt 47451128  T
Q  142 tcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgt 241  Q
    ||||||||||| |  |   |||||||||||||||  ||||||| |||||||||||||||| |||| |||||||||| || |||||||||| ||| |||||    
T  47451129 tcagtattaaaaaaagaa-ttagtaccatatttggaggtgtaattctcgaacggttttctgcagtacagtagttaatcgaacagttgtagttgagcttgt 47451227  T
Q  242 tttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctag 339  Q
    |||||| |||||| ||||||| |||||||||| ||||||||| ||| || |||||||  ||||||||||||||||||||  |||||||||||||||||||    
T  47451228 tttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctag 47451327  T
Q  340 taa 342  Q
    |||    
T  47451328 taa 47451330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 136 - 471
Target Start/End: Original strand, 16649510 - 16649832
Alignment:
Q  136 gtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatga 235  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||     
T  16649510 gtggtttcagtattaaagagtggtattagtaccatatttgagggtgtaattctcgaacagttttctacagtgcagtagttaaccacacagttgtagctgg 16649609  T
Q  236 acttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    ||||||||||||| ||||| ||||||| |||||||||  ||||||||| |||||  |||||||| ||||||||||||||||||||  |||||||||||||    
T  16649610 acttgttttatcccggaggcggcgtggttgatagtctatcttgcacaattttggacagtgccac-aaacgtcttaaagagagcgacctggtcgtgactca 16649708  T
Q  334 acctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttg-gaatccaaaaacaacagttttaagacat 432  Q
    || |||||||||||| |||||||| |                 ||||||||||  ||||||||||||||||  ||||||||||||||| ||||||||| |    
T  16649709 acttagtaacaacttcggtagataat---------------agaatttggaaattcaaatacaacagtttgaaaatccaaaaacaacaattttaagacgt 16649793  T
Q  433 ttcgatctgctatgtctacagaagaaattacttattgag 471  Q
    ||| || |||||||||||| |||||| |||||| |||||    
T  16649794 ttctatatgctatgtctaccgaagaagttacttgttgag 16649832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 82 - 282
Target Start/End: Complemental strand, 8138191 - 8137990
Alignment:
Q  82 ccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtg 181  Q
    ||||||||||||||||||| |||||||| | ||||| || | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8138191 ccatatttgagtggtctcaacaccataatagagtggtaagagtatcatattaaagtggtttcagtattaaagggtggtcttagtaccatatttgagggtg 8138092  T
Q  182 taaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcac 280  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| |   ||| ||||||||||||||||||    
T  8138091 taattctcgaacggttttctacattgcagtagttaaccgcacagttgtagctgagcttgttttatcctggaggcgatatggttgatagtctgccttgcac 8137992  T
Q  281 aa 282  Q
    ||    
T  8137991 aa 8137990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 153 - 357
Target Start/End: Complemental strand, 10135637 - 10135431
Alignment:
Q  153 gagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctgga 252  Q
    |||||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |  ||  ||||||||||||| ||    
T  10135637 gagtggtcgtagtgccatatttgagggtgtaattcttgaacggttttctacagtgcagtagttaaccgcacagttgcaactgggcttgttttatcctaga 10135538  T
Q  253 ggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttg 350  Q
    || ||||||| |||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |    
T  10135537 ggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 10135438  T
Q  351 gtagata 357  Q
    |||||||    
T  10135437 gtagata 10135431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 66 - 348
Target Start/End: Original strand, 18784389 - 18784659
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||| |||||||||||||||  ||||||| | |||||| ||| |||||||||      |||||||||||||| ||||||||||||    
T  18784389 tagaatggtggtaacaccagatttgagtggtctcaataccataatagagtggctacagtaccatattt-----gtttcagtattaaaagagtggtcttag 18784483  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||        || || ||||||||||| ||||||| ||||||| |    
T  18784484 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgc--------agctggacttgttttattctggaggcggcgtggtt 18784574  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    ||||||||||||||||||| ||| || |||||||| ||| |||||||| |||||||  || |||||||||||||||||||||||||    
T  18784575 gatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaaa-agagcgacctgatcgtgactcaacctagtaacaactt 18784659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 28434401 - 28434588
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||||| |||| |||||||||||||||||||||||||| ||||| || |||| |    
T  28434401 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagagtggtaacagtaccatattaaagtggtttcagtattaaaagaatgatctttg 28434500  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggag 253  Q
    ||||||||| || ||||||||||||||||||||||||| |||  |||||||||| ||||| |||||| |||||||||||||||||||||    
T  28434501 taccatattgga-ggtgtaaatctcgaacggttttctatagtaaagtagttaactgcacaattgtagttgaacttgttttatcctggag 28434588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 102 - 365
Target Start/End: Complemental strand, 11806591 - 11806326
Alignment:
Q  102 caccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttct 201  Q
    |||||||| | ||||| || |||||||||||||||| | || |||||||||||||| ||||||| ||||||||||  ||||||||||| |||| ||||||    
T  11806591 caccataaaagagtggtaataataccatattaaagttgcttaagtattaaagagtgatcttagtgccatatttgaaagtgtaaatctcaaacgattttct 11806492  T
Q  202 acagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgca-caatttgggtagtgccacaa 299  Q
     || ||||||| ||||||||||| |||||| ||||||| |||||| ||| ||| ||||||| ||||||||||||||| | || |||| | |||| ||| |    
T  11806491 gcactgcagtatttaaccgcacaattgtagttgaacttcttttattctgaaggcggcgtggttgatagtctgccttgtaccactttgcgcagtgtcacga 11806392  T
Q  300 aacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttttt 365  Q
    ||| |||||||||||||||  |||| ||||||||||||| ||||||||| | |||||||| |||||    
T  11806391 aacatcttaaagagagcgatctggttgtgactcaacctaataacaacttcgatagatatttttttt 11806326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 66 - 366
Target Start/End: Complemental strand, 12260257 - 12259962
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||| ||||||||||||||||||||||||||||||| |||| | |||||  |||||||||||||| | | ||||||||||||| |||||||||||||    
T  12260257 tagaatgatggtaacaccatatttgagtggtctcagcacaataatagagtggtcacaataccatattataatagtttcagtattaa-gagtggtcttagt 12260159  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-g 264  Q
    |      |||  ||||||| | || ||  ||||||||   ||||||||||||||||| ||||||| |||   ||||||||||||  ||  |||||||| |    
T  12260158 a------ttggaggtgtaattttcaaattgttttctattatgcagtagttaaccgcatagttgtacatgtgtttgttttatcctaaagacggcgtggttg 12260065  T
Q  265 atagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttt 363  Q
    |||||||| |||||||||||| ||| |||| ||| |||||||||||||||||||| ||||||||| ||||||| |||||||||||  ||||||||| |||    
T  12260064 atagtctgtcttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacatggtcgtgtctcaaccaagtaacaacttcagtagatattattt 12259965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 66 - 285
Target Start/End: Complemental strand, 16833752 - 16833532
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||| ||| ||||| || | | ||| ||||||||||||||||||||||||||||||| ||||| ||||||| |    
T  16833752 tagaatggtggtaacaccatatttgagtggtttcaacaccaaaatagaatggtaacaataccatattaaagtggtttcagtattaaaagaatggtcttgg 16833653  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| | ||||||||||||||||| |||||||||||| || |||||||||| |||   |||||||||||||| |||||| || |    
T  16833652 taccatattgga-ggtgtaattttcgaacggttttctacaatgcagtagttaatcgaacagttgtagctgaggctgttttatcctggatgtggcgaggtt 16833554  T
Q  264 gatagtctgccttgcacaattt 285  Q
    |||||| || |||||| |||||    
T  16833553 gatagtttgtcttgcataattt 16833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 3094351 - 3094191
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| || |||||   |||||  |||||||||||||     ||||||||||||||| || ||||||||     
T  3094351 tagaatggtggtaacaccatatttgagtggtctcaacatcataattgagtggttacaataccatatt-----ggtttcagtattaaaagattggtcttaa 3094257  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtag 231  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||| || ||||||||||    
T  3094256 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtag 3094191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 206 - 357
Target Start/End: Original strand, 47455353 - 47455506
Alignment:
Q  206 tgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggt-agtgccacaaaacg 303  Q
    |||||||||||| || |||||||||| |   |||||||||||||||||| |||||||| |||| |||| |||||||||||| ||  | |||||| |||||    
T  47455353 tgcagtagttaatcgaacagttgtagctaggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacattgccacgaaacg 47455452  T
Q  304 tcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||||||  |||||||||||||||||| ||||||||| ||| ||||    
T  47455453 tcttaaagagagcgacctggtcgtgactcaacctaataacaacttcggtggata 47455506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 233 - 363
Target Start/End: Complemental strand, 8900355 - 8900223
Alignment:
Q  233 tgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgac 330  Q
    |||||||||||||||||||||| || ||| | |||||| ||  |||||||| ||| |  |||| |||||||||| ||||||||||||| |||||||||||    
T  8900355 tgaacttgttttatcctggaggcggtgtgattgatagtatgttttgcacaactttagacagtgtcacaaaacgttttaaagagagcgatatggtcgtgac 8900256  T
Q  331 tcaacctagtaacaactttggtagatattcttt 363  Q
    |||||||||||||||||| ||||||||||||||    
T  8900255 tcaacctagtaacaacttcggtagatattcttt 8900223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 263 - 357
Target Start/End: Complemental strand, 3094184 - 3094089
Alignment:
Q  263 tgatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||||||||| ||| |||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  3094184 tgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 3094089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 275 - 471
Target Start/End: Complemental strand, 25855229 - 25855046
Alignment:
Q  275 ttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnn 373  Q
    ||||||||||| ||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| |                  
T  25855229 ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataat-------------- 25855144  T
Q  374 nttaatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgag 471  Q
       |||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||| |||| |||||||| |||||| | |||| |||||| |||||    
T  25855143 -agaatttggaaatccaaatacaacagtttggaaattcaaaaacaacaattttaagacgtttcaatctgctacgtctaccggagaagttacttgttgag 25855046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 41097785 - 41097892
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||| |||||||||| ||||||||| |||||||| | | ||| |||||||||||||     |||||||||||||||||||||||||||||    
T  41097785 tagaatggtggtaataccatatttgcgtggtctcaacaccataatagaatggtaacaataccatat-----tggtttcagtattaaagagtggtcttagt 41097879  T
Q  166 accatatttgagg 178  Q
    |||||||| ||||    
T  41097880 accatattagagg 41097892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 8267663 - 8267774
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||| ||||| |||||||||||||||||| |||||||| | ||||   |||||||||||||     |||||||||||| |||||||||||||||    
T  8267663 tagaatggtgataacaacatatttgagtggtctcaacaccataatagagtgatcacaataccatatt-----ggtttcagtatttaagagtggtcttagt 8267757  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||||||||    
T  8267758 accatattagagggtgt 8267774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 238 - 336
Target Start/End: Complemental strand, 10106199 - 10106100
Alignment:
Q  238 ttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||||||||||  |||||||| | |||||| |||||||||| |||||||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  10106199 ttgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 10106100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 13890908 - 13890810
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  || ||||| | |||||| |||||||||| |||||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  13890908 tgttttatcctggagacggtgtggttgttagtctaccttgcacaacttgggtagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 13890810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 33055300 - 33055189
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||| |||||||||||||||||||||||| |||||||  | |||||  ||||||||||||||     |||| |||||||||||||||  |||||    
T  33055300 tagaatggtgataacaccatatttgagtggtctcaacaccatagtagagtggtcacaataccatatta-----gttttagtattaaagagtggcattagt 33055206  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||||||||    
T  33055205 accatattagagggtgt 33055189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 26651166 - 26651264
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| |||||||||||| |||||| |||||||||||| ||  ||||||||||||||||    
T  26651166 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcaaaacatcttaaagagagtgacctggtcgtgactcaacc 26651264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 38734370 - 38734272
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| | |||||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  38734370 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 38734272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 16649409 - 16649508
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||  ||| ||||| ||||||| || |||||| |||||| |||||||||||||||||||||||| ||| |||||||||    
T  16649409 atcaccatatttgagtggtcgtagtctcatattgatgttttggagaaattaaagttagaatcgtggtaacaccatatttgagtggtttcaacaccataac 16649508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 39747165 - 39747263
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  | |||||| | |||||| |||||||||| |||||||||||| | |||||||||||||||||| |  ||||||||||||||||    
T  39747165 tgttttatcctggagacgacgtggttgctagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctggtcgtgactcaacc 39747263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 5725074 - 5724979
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||| ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  5725074 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 5724979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 34318224 - 34318319
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  34318224 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacttggtcgtgactca 34318319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 36684715 - 36684810
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  36684715 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 36684810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 4632961 - 4633031
Alignment:
Q  273 ccttgcacaatttggg-tagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaa 342  Q
    |||||||||| || || ||||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  4632961 ccttgcacaaattcggatagtgccgcaaaacgtcttaaagagagcgacatagtcgtgactcaacctagtaa 4633031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 5602425 - 5602523
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||| |||||  |||||||| | |||||| |||||||||| | |||||||||  | ||||||||||||||||||||  ||||||||||||||||    
T  5602425 tgttttatcttggagacggcgtggttgttagtctaccttgcacaactagggtagtgcagcgaaacgtcttaaagagagcgatctggtcgtgactcaacc 5602523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 197 - 343
Target Start/End: Complemental strand, 5346800 - 5346652
Alignment:
Q  197 tttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaa-tttgggtagtgc 294  Q
    |||||||| || |||| ||||  ||| |||||||| ||||||||||| ||| |||||| |||||| | |||||||||  ||| |||| |||||  |||||    
T  5346800 tttctacattgtagtatttaattgcatagttgtagctgaacttgtttcatcttggaggcggcgtgattgatagtctgtattgtacaaatttggacagtgc 5346701  T
Q  295 cacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaac 343  Q
    |||||||||| ||||||||| |||  || | || |||||||||||||||    
T  5346700 cacaaaacgttttaaagagaacgacctgattgtaactcaacctagtaac 5346652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 388 - 471
Target Start/End: Complemental strand, 10140048 - 10139964
Alignment:
Q  388 ccaaatacaacagtttgg-aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgag 471  Q
    |||||||||  ||||||| ||| ||||||||||| ||||||||| ||||||||| |||||||||| |||||| || |||||||||    
T  10140048 ccaaatacagtagtttgggaatacaaaaacaacaattttaagacgtttcgatctactatgtctaccgaagaagttgcttattgag 10139964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 3584696 - 3584601
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||| |||||| || | |||||||||||||| |||||  |||||||||||||    
T  3584696 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 3584601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 11251113 - 11251208
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  11251113 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 11251208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 301
Target Start/End: Original strand, 25779155 - 25779380
Alignment:
Q  80 caccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa---gagtggtcttagta-ccatatttg 175  Q
    ||||||||||||||| ||| |  ||||||| | |||||  | ||||| |||||| ||||||||||||||||||   |||||||||||  | |||||||||    
T  25779155 caccatatttgagtgatcttaataccataatagagtggtcataatactatattatagtggtttcagtattaaatttgagtggtcttaaaagccatatttg 25779254  T
Q  176 agggtgtaaatctcgaacggttttctacagtgcag--tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctg 272  Q
    ||||||||| ||||||    ||  |||||||||||  ||||||| || ||| |||| | || | ||||||||||||| | ||||||||| ||||| | |     
T  25779255 agggtgtaattctcga----ttagctacagtgcagtatagttaatcgtacaattgtcgttggaattgttttatcctgaatgtggcgtggctgataatatt 25779350  T
Q  273 ccttgcacaa-tttgggtagtgccacaaaa 301  Q
     ||||||||| |||||  ||||||||||||    
T  25779351 tcttgcacaattttggacagtgccacaaaa 25779380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 37404416 - 37404511
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  37404416 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 37404511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 19422913 - 19422982
Alignment:
Q  273 ccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaa 342  Q
    |||||||||| |||||||||||  | ||||||||||||||||||||  || ||||||||||||| |||||    
T  19422913 ccttgcacaacttgggtagtgcagcgaaacgtcttaaagagagcgatctgatcgtgactcaacccagtaa 19422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 11806653 - 11806585
Alignment:
Q  18 tatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccata 86  Q
    |||||||| |||| ||||||||| ||||||||||||| ||||||||| || ||||||| | ||||||||    
T  11806653 tatttgagtggtcgtagtgccatattgatattttggagaacttaaagttataatggtgctgacaccata 11806585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 5730172 - 5730105
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| ||||||||||||| |||||| || | |||||||||||||| |||||  |||||||||||||    
T  5730172 tagtctaccttgcacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 5730105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 27716510 - 27716443
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  27716510 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 27716443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 37409565 - 37409632
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  37409565 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 37409632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 2493817 - 2493898
Alignment:
Q  238 ttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcga 318  Q
    |||||||||||||| || | |||||| |||||| ||| ||||||||||| ||| |||||||| ||||||||||||||||||||    
T  2493817 ttgttttatcctgggggcgccgtggttgatagtttgc-ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcga 2493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 14582194 - 14582096
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  || ||||| | |||||| |||||||||| | |||||||||| | |||| |||||||||||||||  || |||| ||||||||    
T  14582194 tgttttatcctggagacggtgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacttcttaaagagagcgacctgatcgtaactcaacc 14582096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 377 - 430
Target Start/End: Original strand, 47451350 - 47451404
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaagac 430  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||| |||||||||    
T  47451350 aatttggaaatccaaatacaactgtttggaaatccaaaaacaacaattttaagac 47451404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 318
Target Start/End: Complemental strand, 12906248 - 12906169
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcga 318  Q
    ||||||||||||| || | |||||| |||||||||| ||||||||||| ||| |||||||| ||||||||||||||||||||    
T  12906248 tgttttatcctgg-ggcgtcgtggttgatagtctgc-ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcga 12906169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 16832133 - 16832076
Alignment:
Q  300 aacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||||||  |||||||    
T  16832133 aacgtcttaaagagagcgacctggtcgtgactcaatatagtaacaacttaagtagata 16832076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 25661858 - 25661899
Alignment:
Q  274 cttgcacaattt-gggtagtgccacaaaacgtcttaaagaga 314  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  25661858 cttgcacaattttgggtagtgccacaaaacgtcttaaagaga 25661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 36724768 - 36724723
Alignment:
Q  274 cttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcga 318  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||    
T  36724768 cttgcacaattttgggtagtgccataaaacgtcttaaagagagcga 36724723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 11387858 - 11387925
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| |||||||||| || ||||||||| | |||||||||||| | |||||  |||||||||||||    
T  11387858 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 11387925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 97
Target Start/End: Original strand, 25779082 - 25779113
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtc 97  Q
    ||||||||||||||||||||||||||||||||    
T  25779082 tagaatggtggtaacaccatatttgagtggtc 25779113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 323 - 357
Target Start/End: Complemental strand, 25843821 - 25843787
Alignment:
Q  323 gtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||||||||||||||||| ||||||||    
T  25843821 gtcgtgactcaacctagtaacaacttcggtagata 25843787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 425
Target Start/End: Original strand, 33301305 - 33301354
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagtttt 425  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||| ||||    
T  33301305 aatttggaaatccaaatacaacagattggaaatccaaaaacaacactttt 33301354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 39200538 - 39200607
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaac 80  Q
    |||| |||||||||| | || || |||||| |||||| |||||| || |||||| |||||||||||||||    
T  39200538 atcaccatatttgagtgatcgtaatgccatattgatactttggagaaattaaagttagaatggtggtaac 39200607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 421
Target Start/End: Original strand, 47455511 - 47455556
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaacag 421  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||||    
T  47455511 aatttggaaatccaaatacaactgtttggaaatccaaaaacaacag 47455556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 48246683 - 48246756
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaag 311  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||    
T  48246683 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaag 48246756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 25843782 - 25843738
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||    
T  25843782 aatttggaaatccaaatacaacagtttggaaattcaaaaacaaca 25843738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 27711371 - 27711319
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcga 318  Q
    |||||| |||||||||| || ||||||||| | |||||||||||||| |||||    
T  27711371 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcga 27711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 217; Significance: 1e-119; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 7427 - 7079
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||| ||| ||||| ||||||| || |||||| ||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  7427 atcaccatatttgagtggtcgtagtgtcatattgatgttttggagaaattaaagttagaatggtggcaacacaatatttaagtggtatcaacaccataac 7328  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||| |||| |||||||||||||||||||||||||    
T  7327 agagtggtaacaataccatattaaggtggtttcagtattaaagagtggtcttaatacaatatttgagggcgtaattctcgaacggttttctacagtgcag 7228  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||    
T  7227 tagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctta 7128  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  7127 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 7079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 425
Target Start/End: Complemental strand, 7074 - 7025
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagtttt 425  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  7074 aatttggaaatccaaatacaacagtttggaaatccaaaaacaacagtttt 7025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 44925696 - 44926043
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||  |||| ||||||||| ||||| ||||||| || |||||| |||||||||||||| |||||||||||||||||||  |||||||||    
T  44925696 atcaccatatttgaatggtcgtagtgccatattgatgttttggagaaattaaagttagaatggtggtaaaaccatatttgagtggtctcgacaccataac 44925795  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  44925796 agagtggtaacagtatcatattaaagtggtttcagtattaaagagtggttttagtaccatatttgagggtgtaattctcgaacggttttctacagtgca- 44925894  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| |||||| |||    
T  44925895 tagttaaccgcatagttgtagatgaccttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtttta 44925994  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  44925995 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 44926043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 33416869 - 33416522
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||| ||||||| || |||||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  33416869 atcaccatatttgagtggtcgtagtgccatattgatgttttggagaaattaaagttagaatggtggtaacatcatatttgagtggtctcaacaccataac 33416770  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | | ||  ||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||     
T  33416769 agaatgataacaatatcatattaaagtggtttcagtattaaagagcggtcttagtaccgtatttgagggtgtaattctcgaacggttttctacagtgca- 33416671  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| ||  ||||||||||| |||||| ||||||| |||||||||| ||||||||| |||||| |||||||| ||||||||||    
T  33416670 tagttaaccgcacagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctta 33416571  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||| |||  |||||||||||||||||||||||||||| ||||||||    
T  33416570 aagagaccgacctggtcgtgactcaacctagtaacaacttcggtagata 33416522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 36683902 - 36683554
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||| ||||||| || |||||| ||||||||||| || |||||||||||||||||||| |||||||||    
T  36683902 atcaccatatttgagtggtcgtagtgccatattgatcttttggagaaattaaagttagaatggtggcaagaccatatttgagtggtctcaacaccataac 36683803  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  36683802 atagtggtaacaataccatattaaagtgatttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcaaacgattttctacagtgcag 36683703  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| ||||||| ||||| ||| ||||||||||||||||||  |||||| |||||||||||||| ||||| |||||| |||||||| ||||||||||    
T  36683702 tagttaatcgcacagatgtagctgaccttgttttatcctggaggcagcgtggttgatagtctgccttacacaattttgggcagtgccacgaaacgtctta 36683603  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  | ||| |||||||||||||||||||||  ||||||||    
T  36683602 aagagagcgacctagtcatgactcaacctagtaacaactccggtagata 36683554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 19166957 - 19166609
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| || |||||| |||   ||||||| || |||||| |||||||||||||||||||||| |||||||||||| ||||||||     
T  19166957 atcaccatatttgagtggtcgtaatgccatattgtagttttggagaaattaaagttagaatggtggtaacaccatatatgagtggtctcaacaccataat 19166858  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||| | |||||||||||||| ||| ||| ||||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  19166857 agagtggtaaccacaccatattaaagtgatttaagttttaaagaatgatcttagtaccatatttgagggtgtaattctcgaacggttttctatagtgcag 19166758  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||| |||||||||||| ||| |||||||||||||||||| ||||||| |||||||||||| ||||||| |||||| |||||||| ||||||||||    
T  19166757 tagttaacagcacagttgtagttgagcttgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtctta 19166658  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  19166657 aagagagcgacatggtcgtgactcaacctagtaacaacttcggtagata 19166609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 16 - 357
Target Start/End: Original strand, 1910746 - 1911089
Alignment:
Q  16 catatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagt 115  Q
    |||||||||| |||| ||||| ||| |||||| |||||| || ||||||  ||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  1910746 catatttgagtggtcgtagtgtcatattgatactttggagaaattaaagtcagaatggtggtaacatcatatttgagtggtctcagcaccataacagagt 1910845  T
Q  116 ggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagtt 215  Q
    || |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  1910846 ggtaacagtaccatattaaagtggtttcagtattaaagagtggtcttaataccatatttgaatgtgtaaatctcgaatggttttctacagtgcagtagtt 1910945  T
Q  216 aaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagag 313  Q
    |||||||||||||||| ||| |||||||||| |||||||  |||||| ||||||||||| |||||||| ||||  ||||||||| |||||||||||||||    
T  1910946 aaccgcacagttgtagttgagcttgttttatactggaggcagcgtggttgatagtctgctttgcacaattttgactagtgccacgaaacgtcttaaagag 1911045  T
Q  314 agcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||  || |||||||| |||||| ||||||||| | ||||||    
T  1911046 agcgacctgatcgtgacttaacctaataacaacttcgatagata 1911089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 361
Target Start/End: Original strand, 23548402 - 23548756
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    ||||||||||||||| ||||||||||| || |||||||| |||| ||||||||| | ||||||||||||||||||||||||||| ||||| |||||||||    
T  23548402 atcatcatatttgagtggtcatagtgcgatattgatattatggagaacttaaagttcgaatggtggtaacaccatatttgagtgatctcaacaccataac 23548501  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtat--taaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgc 208  Q
    | ||||| |||||||||||||||||||| |||||||||  |||| ||||||||||||| ||||||| |||||| |||||| ||||||||||||||| |||    
T  23548502 agagtggtaacaataccatattaaagtgatttcagtattataaatagtggtcttagtatcatatttaagggtgaaaatcttgaacggttttctacaatgc 23548601  T
Q  209 agtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtct 306  Q
    ||||||||||||| ||||||||| ||||||||||||||||| |||| | ||||| |||||||| ||||||||||| |||    |||||||| ||||||||    
T  23548602 agtagttaaccgcgcagttgtagctgaacttgttttatcctagaggcgacgtggttgatagtccgccttgcacaattttacacagtgccacgaaacgtct 23548701  T
Q  307 taaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattct 361  Q
    || |||||||||   ||||||||||||||||||||||||||| ||||||||||||    
T  23548702 tatagagagcgaccaggtcgtgactcaacctagtaacaacttcggtagatattct 23548756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 69 - 366
Target Start/End: Complemental strand, 24090887 - 24090593
Alignment:
Q  69 aatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtacc 168  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||     
T  24090887 aatggtggtatcaccatatttgagtggtctcagcaccataacagagtggtaacaatatcatattaaagtggtttcaatattaaagagtggtcttagtaca 24090788  T
Q  169 atatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg-gtgata 267  Q
    |||||||||| |||||||||||||||||||||||     || ||||||||||||||||||||||| | ||||||||||| |||||| | ||||  |||||    
T  24090787 atatttgaggatgtaaatctcgaacggttttcta-----caatagttaaccgcacagttgtagataagcttgttttatcttggaggcgacgtgattgata 24090693  T
Q  268 gtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttc 366  Q
     |||||||||||||| |||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||    
T  24090692 ttctgccttgcacaactttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagatattctttttc 24090593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 66 - 348
Target Start/End: Original strand, 40125713 - 40125996
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| |||| | ||||||||||||||||||||||||||||||||||||||||    
T  40125713 tagaatggtggtaacaccatatttgagtggtctcagcaccatat-agagtggtaacagtgccatattaaagtggtttcagtattaaagagtggtcttagt 40125811  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    ||||||||||  ||||||| ||||||||| |||||||| ||||||||||||| || |||||||||| ||  ||||||||||| |||||| ||||||| ||    
T  40125812 accatatttggaggtgtaattctcgaacgattttctacggtgcagtagttaatcgaacagttgtagctgggcttgttttatcttggaggcggcgtggttg 40125911  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  40125912 atagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaacaactt 40125996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 11 - 466
Target Start/End: Complemental strand, 2965953 - 2965500
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| || | |||| |||| | ||||  || || ||||||| | || ||||||||||||| ||||||||||| |||||| |||||||||    
T  2965953 atcaccatatttgagtgggcgtagtaccatatcgatagattagagaacttaacgttaaaatggtggtaacatcatatttgagtagtctcaacaccataac 2965854  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  2965853 agagtggtaacaatactatattaaagtagttttagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcaaatggttttctacagtgcag 2965754  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||| ||| |||||||| || |||||||||||||| |||| || |||| ||||||| || ||||||||| ||| || |||||||| |||||| |||    
T  2965753 tagttaactgcatagttgtagctggacttgttttatcctagaggcggtgtggttgatagtgtgtcttgcacaattttaggcagtgccacgaaacgtttta 2965654  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagttt-ggaa 407  Q
    ||||||||||  |||||||||||| |||||||||||| |||||| ||||||  |||||          ||||||||||  |||||||| |||||| | ||    
T  2965653 aagagagcgacctggtcgtgactc-acctagtaacaaatttggtggatatttcttttcaaaatag---aatttggaaattcaaatacagcagtttcgaaa 2965558  T
Q  408 tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattactta 466  Q
    ||||||||||||| ||||||||| ||| || ||||||| ||||| ||||||||||||||    
T  2965557 tccaaaaacaacaattttaagacgttttga-ctgctatatctaccgaagaaattactta 2965500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 17026203 - 17025910
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttag 164  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || | ||||||||||||||||||||| |||| ||||| ||||||| |    
T  17026203 tagaatggtggtaacaccatatttgagtggtctcagcaccataatagagtggtaatagtaccatattaaagtggtttcaatattaaaagaatggtcttgg 17026104  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg-gt 263  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||| || |||||||||| |  ||||||||||||||||||| | ||||  |    
T  17026103 taccatattgga-ggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctagacttgttttatcctggaggcgacgtgatt 17026005  T
Q  264 gatagtctgccttgcacaat-ttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  17026004 gatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 17025910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 17556695 - 17556402
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttag 164  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || | ||||||||||||||||||||| |||| ||||| ||||||| |    
T  17556695 tagaatggtggtaacaccatatttgagtggtctcagcaccataatagagtggtaatagtaccatattaaagtggtttcaatattaaaagaatggtcttgg 17556596  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg-gt 263  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||| || |||||||||| |  ||||||||||||||||||| | ||||  |    
T  17556595 taccatattgga-ggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctagacttgttttatcctggaggcgacgtgatt 17556497  T
Q  264 gatagtctgccttgcacaat-ttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  17556496 gatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 17556402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 66 - 357
Target Start/End: Original strand, 31449698 - 31449986
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   |||||  |||||||||||||     ||||||||||||||| || |||||||||    
T  31449698 tagaatggtggtaacaccatatttgagtggtctcaacaccataattgagtggttacaataccatatt-----ggtttcagtattaaaagattggtcttag 31449792  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| ||||||| |    
T  31449793 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctggacttgttttatcctggaggcggcgtggtt 31449891  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| | ||||||    
T  31449892 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagata 31449986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 113 - 584
Target Start/End: Complemental strand, 34118687 - 34118230
Alignment:
Q  113 agtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagta 212  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| || |||||||||||||||| ||||||||| ||||||||    
T  34118687 agtggtaacaataccatattaaagtggtttcattattaaagagtggccttagtaccatattcgaaggtgtaaatctcgaacagttttctacggtgcagta 34118588  T
Q  213 gttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaa 310  Q
    |||||| |||||||||||| ||  |||||||||||||  ||| | ||||| |||||||||||||||||||| |||||| |||||||  ||||||||||||    
T  34118587 gttaacagcacagttgtagctgggcttgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaa 34118488  T
Q  311 gagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aatc 409  Q
    ||||||||  ||||||||||||||||||||||||||||  ||||||| |                 |||||||||| | |||||||  ||||||| ||||    
T  34118487 gagagcgacctggtcgtgactcaacctagtaacaacttcagtagataat---------------agaatttggaaatctaaatacattagtttggaaatc 34118403  T
Q  410 caaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattttgttgtaccaaaattaaaacaaggataaatcagg 509  Q
    ||||||||||| ||||||||| |||||||||||||||||||| |||||| ||| |||||||| ||  ||||| || ||| || || |||||||||||| |    
T  34118402 caaaaacaacaattttaagacgtttcgatctgctatgtctaccgaagaagttatttattgaggttcagttgtccctaaa-tacaagaaggataaatcaag 34118304  T
Q  510 ctataaaaatacatattttggactgatataatgaagtgattgttgttataacaacgacaataagagattcacata 584  Q
    ||||| ||||||||  |||  ||||| |  |||||||| ||  |||||||||||||| | ||||| || ||||||    
T  34118303 ctatagaaatacat-ctttcaactgaaacgatgaagtgtttactgttataacaacgaaactaagaaatccacata 34118230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 11 - 554
Target Start/End: Original strand, 38182028 - 38182538
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| |||||| |||||| || |||||| | |||| |||||||||||||||||||||||||||| |||||||||    
T  38182028 atcaccatatttgagtggtcgtagtgccatattgatactttggagaaattaaagtttgaatagtggtaacaccatatttgagtggtctcaacaccataac 38182127  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||| ||||||||||||||||                   ||||||||||||||| |||||||||||||||||||||| || |||||||    
T  38182128 agagtggtaacaatatcatattaaagtggttt-------------------tagtaccatatttgaaggtgtaaatctcgaacggttttttatagtgcag 38182208  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaat-ttgggtagtgccacaaaacgtctta 308  Q
    |||||||| |||||||||||| ||  |||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||| |||||||| |||||| |||    
T  38182209 tagttaacagcacagttgtagctgtgcttgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgtttta 38182308  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttg-gaa 407  Q
    ||||||||||  ||||||||||||||||| |||||||||| |||||||| |                 |||||||||| |||||||||||||||||  ||    
T  38182309 aagagagcgacctggtcgtgactcaacct-gtaacaacttcggtagataat---------------agaatttggaaatccaaatacaacagtttgacaa 38182392  T
Q  408 tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaa---attacttattgagattttgttgtaccaaaattaaaacaaggataaa 504  Q
    | ||||||||||| ||||||||| |||||| ||||||||||||| ||||||   ||||||||||||||||| ||||| || | | || || |||||||||    
T  38182393 ttcaaaaacaacaattttaagacgtttcga-ctgctatgtctaccgaagaaattattacttattgagatttcgttgtccctata-tacaagaaggataaa 38182490  T
Q  505 tcaggctataaaaatacatattttggactgatataatgaagtgattgttg 554  Q
      |||||||| ||||||||  ||| |||||| |  |||||||||||||||    
T  38182491 -aaggctatagaaatacat-ctttcgactgaaacgatgaagtgattgttg 38182538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 125 - 353
Target Start/End: Original strand, 18876253 - 18876482
Alignment:
Q  125 accatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcaca 224  Q
    |||||||||| ||||||||| |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18876253 accatattaaggtggtttcaatattaaagagtggtattagtatcatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcaca 18876352  T
Q  225 gttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatg 322  Q
    |||||||||||  ||||||||||||||||| ||||||| |||||||||| ||||||||| |||||| |||||||| |||||||||||| |||||||  ||    
T  18876353 gttgtagatgagtttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-agagcgacctg 18876451  T
Q  323 gtcgtgactcaacctagtaacaactttggta 353  Q
    |||||||||||||||||||||||||| ||||    
T  18876452 gtcgtgactcaacctagtaacaacttcggta 18876482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 136 - 357
Target Start/End: Complemental strand, 1807671 - 1807447
Alignment:
Q  136 gtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatga 235  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||     
T  1807671 gtggtttcagtattaaagagtgatcttagtaccatatttgaaggtgtaaatctcgaacggttttctacagtgcactagttaaccgcacagttgtagctgg 1807572  T
Q  236 acttg-ttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactc 332  Q
    ||||| ||||||||| |||| ||||||| |||||||||||||||||||| |||||| |||| ||| ||||||||||||||||||||  | ||||||||||    
T  1807571 acttgtttttatcctagaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctagtcgtgactc 1807472  T
Q  333 aacctagtaacaactttggtagata 357  Q
    |||||||||||||||| ||||||||    
T  1807471 aacctagtaacaacttcggtagata 1807447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 15951333 - 15951579
Alignment:
Q  17 atatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtg 116  Q
    ||||||||| |||| |||| |||  |||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  15951333 atatttgagtggtcgtagtaccaaattgatagtttggagaacttaaagttagaatggtgttaacaccatatttgagtggtctcagcaccataacagagtg 15951432  T
Q  117 gcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctac--agtgcagtagt 214  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||  |||||||||||    
T  15951433 gtaacaataccatattaaagtgatttcagtattaaagagtggtcttagtaccata-tcgaacgtgtaaatctcgaacggttttctacagagtgcagtagt 15951531  T
Q  215 taaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt 263  Q
    |||| |||||||||||| ||  |||||||||| ||||||| ||||||||    
T  15951532 taactgcacagttgtagctgggcttgttttat-ctggaggcggcgtggt 15951579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 28559438 - 28559774
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||| ||| ||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  28559438 atcaccatatttgagtggtcgtagtgtcatattgatattttggagaa-ttaaagttagaatggtggtaacaccatatttgagtggtctcagcaccataag 28559536  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||          |||||||||| |||| || |||| ||||||| |||||||||||||| |||||||||     
T  28559537 agagtggtaacaataccatattaaagtggtttc----------agtggtcttactaccgta-ttgaaggtgtaattctcgaacggttttttacagtgcaa 28559625  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || |||||| ||  ||  ||| |||||||||| ||  ||||||| ||||||| |||||||||||| |||||  |||||||| ||||||||||    
T  28559626 tagttaatcgaacagttctaactgggcttattttatcctgcagacggcgtggttgatagtttgccttgcacaattttggacagtgccacgaaacgtctta 28559725  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
     ||||||||| || |||||||||||||||||||||||||| ||||||||    
T  28559726 tagagagcgacattgtcgtgactcaacctagtaacaacttcggtagata 28559774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 11 - 343
Target Start/End: Original strand, 28564593 - 28564927
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||||||||||| || |||||| || |||||||||||||||||||||||||||||||||||||||||     
T  28564593 atcagcatatttgagtggtcgtagtgccatattgatattttggagaa-ttaaagttaaaatggtggtaacaccatatttgagtggtctcagcaccataag 28564691  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||||||||||||||||||  ||||||||||||||||| || |||| |||| ||||||| ||||||||||||||||||| ||||     
T  28564692 agagtggtaacaataccatattaaagtggtttcaacattaaagagtggtcttactatcata-ttgaaggtgtaattctcgaacggttttctacactgcaa 28564790  T
Q  211 tagttaaccgcacagttgtagatgaacttgttt--tatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtct 306  Q
    ||||||| || |||||| ||   |  |||||||  ||||||| ||  ||||||| | |||||||| |||| |||| |||| | |||| ||  ||| || |    
T  28564791 tagttaatcgaacagttctaaccgggcttgttttatatcctgcagacggcgtggttaatagtctgtcttgaacaattttgagcagtgtcatgaaatgttt 28564890  T
Q  307 taaagagagcgaaatggtcgtgactcaacctagtaac 343  Q
    || |||||||||  || ||||||||||||||||||||    
T  28564891 tatagagagcgacctgatcgtgactcaacctagtaac 28564927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 11 - 343
Target Start/End: Original strand, 28572216 - 28572550
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||||||||||| || |||||| || |||||||||||||||||||||||||||||||||||||||||     
T  28572216 atcagcatatttgagtggtcgtagtgccatattgatattttggagaa-ttaaagttaaaatggtggtaacaccatatttgagtggtctcagcaccataag 28572314  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||||||||||||||||||  ||||||||||||||||| || |||| |||| ||||||| ||||||||||||||||||| ||||     
T  28572315 agagtggtaacaataccatattaaagtggtttcaacattaaagagtggtcttactatcata-ttgaaggtgtaattctcgaacggttttctacactgcaa 28572413  T
Q  211 tagttaaccgcacagttgtagatgaacttgttt--tatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtct 306  Q
    ||||||| || |||||| ||   |  |||||||  ||||||| ||  ||||||| | |||||||| |||| |||| |||| | |||| ||  ||| || |    
T  28572414 tagttaatcgaacagttctaaccgggcttgttttatatcctgcagacggcgtggttaatagtctgtcttgaacaattttgagcagtgtcatgaaatgttt 28572513  T
Q  307 taaagagagcgaaatggtcgtgactcaacctagtaac 343  Q
    || |||||||||  || ||||||||||||||||||||    
T  28572514 tatagagagcgacctgatcgtgactcaacctagtaac 28572550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 167 - 356
Target Start/End: Original strand, 17953800 - 17953992
Alignment:
Q  167 ccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagtt-gtagatgaacttgttttatcctggaggtggcgtggt-g 264  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||| | ||||||| |||| ||| ||||||||||| |||||| |||||||| |    
T  17953800 ccatatttgagggtgtaattctcgaacgattttctacagtgcagtagttaatcacacagtttgtaggtgagcttgttttatcttggaggcggcgtggttg 17953899  T
Q  265 atagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagat 356  Q
    ||| |||| |||||||||||| ||| |||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||| |||||||    
T  17953900 atattctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgttactcaacctagtaacaacttcggtagat 17953992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 17020661 - 17020470
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| ||||||| || |||||||||||||| |||||| |||| | || |||||| |||||||||||||||||||| |||||||||||||||| ||||||     
T  17020661 atcaccatatttaagtggtcatagtgccatattgatactttgaagaaattaaagttagaatggtggtaacaccatgtttgagtggtctcagcgccataag 17020562  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttcta 202  Q
    | | | | ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| ||  ||||||||||| ||||||||||||    
T  17020561 agaattgtaacaatatcatatgaaagtggtttcaatattaaagagtggtcttagtaccatattcgaatgtgtaaatctcaaacggttttcta 17020470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 17551098 - 17550907
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| ||||||| || |||||||||||||| |||||| |||| | || |||||| |||||||||||||||||||| |||||||||||||||| ||||||     
T  17551098 atcaccatatttaagtggtcatagtgccatattgatactttgaagaaattaaagttagaatggtggtaacaccatgtttgagtggtctcagcgccataag 17550999  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttcta 202  Q
    | | | | ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| ||  ||||||||||| ||||||||||||    
T  17550998 agaattgtaacaatatcatatgaaagtggtttcaatattaaagagtggtcttagtaccatattcgaatgtgtaaatctcaaacggttttcta 17550907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 167 - 348
Target Start/End: Original strand, 15875596 - 15875779
Alignment:
Q  167 ccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tga 265  Q
    ||||||||||| |||||| ||| ||||||||||||| |||||||||||||| || ||| |||||| ||| |||||||||||||||||| ||||||| |||    
T  15875596 ccatatttgagagtgtaattcttgaacggttttctatagtgcagtagttaatcgtacaattgtagctgagcttgttttatcctggaggcggcgtggttga 15875695  T
Q  266 tagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    ||||||||||||||||| |||||| |||||||| ||||||| ||||||||||||  ||||||| ||||||  ||||||||||||    
T  15875696 tagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgacctggtcgtaactcaatttagtaacaactt 15875779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 4238173 - 4238333
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| || |||||   |||||  |||||||||||||     ||||||||||||||| || |||||||||    
T  4238173 tagaatggtggtaacaccatatttgagtggtctcaacatcataattgagtggttacaataccatatt-----ggtttcagtattaaaagattggtcttag 4238267  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtag 231  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||| || ||||||||||    
T  4238268 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtag 4238333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 4242912 - 4243072
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| || |||||   |||||  |||||||||||||     ||||||||||||||| || |||||||||    
T  4242912 tagaatggtggtaacaccatatttgagtggtctcaacatcataattgagtggttacaataccatatt-----ggtttcagtattaaaagattggtcttag 4243006  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtag 231  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||| || ||||||||||    
T  4243007 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtag 4243072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 66 - 262
Target Start/End: Original strand, 43302520 - 43302714
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggt---ctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtct 161  Q
    |||||||||||||||||||||||||||||||   |||| |||||||| | |||||  | | |||||||||     ||||||| ||||||| |||| ||||    
T  43302520 tagaatggtggtaacaccatatttgagtggtggtctcaacaccataatagagtggtcatagtaccatatt-----ggtttcaatattaaaagagtagtct 43302614  T
Q  162 tagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg 261  Q
    |||||||| ||| || ||||||| ||||||||| |||||||||||||||||||||||||||||| || || ||  |||||||||||||||||| ||||||    
T  43302615 tagtaccacatt-gaaggtgtaattctcgaacgattttctacagtgcagtagttaaccgcacaggtgcagctgggcttgttttatcctggaggcggcgtg 43302713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 263 - 471
Target Start/End: Original strand, 4238340 - 4238536
Alignment:
Q  263 tgatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattct 361  Q
    ||||||||||||||||||||||| ||| |||||||  |||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| |      
T  4238340 tgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataat-- 4238437  T
Q  362 ttttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aatcc-aaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaa 459  Q
                   |||||||||| |||||||||||||||||| ||||| |||||||||| ||||||||| |||||||||||||| ||||  ||||||     
T  4238438 -------------agaatttggaaatccaaatacaacagtttggaaatccaaaaaacaacaattttaagacgtttcgatctgctatatctatcgaagaag 4238524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 25367813 - 25367924
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | | ||| |||||||||||||     || ||||||||||||||||||| ||||||    
T  25367813 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagaatggtaacaataccatat-----tgatttcagtattaaagagtggacttagt 25367907  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||||||||    
T  25367908 accatattagagggtgt 25367924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 50 - 182
Target Start/End: Original strand, 34818516 - 34818643
Alignment:
Q  50 ttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt 149  Q
    ||||| || |||||| ||||||||||||| |||||||||||||||||| || |||||||| | | ||| |||| |||||||||     ||||||||||||    
T  34818516 ttggagaagttaaagttagaatggtggtagcaccatatttgagtggtcacaacaccataatagaatggtaacagtaccatatt-----ggtttcagtatt 34818610  T
Q  150 aaagagtggtcttagtaccatatttgagggtgt 182  Q
    |||||||||||||||||||||||| ||||||||    
T  34818611 aaagagtggtcttagtaccatattagagggtgt 34818643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 11 - 361
Target Start/End: Original strand, 24673106 - 24673449
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctag-aatggtggtaacaccatatttgagtggtctcagcaccataa 109  Q
    |||| ||||||| || |||| |||| |||| ||| ||||||| | ||||||||| | | ||||||| ||||| |||||||||||||||| |||||||  |    
T  24673106 atcaccatatttaagtggtcgtagtaccatattgttattttgaagaacttaaaggttggaatggtgataacatcatatttgagtggtcttagcaccacta 24673205  T
Q  110 caaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgca 209  Q
     | |||| ||  | |||||||||| ||||||||||  |||||| |||||||||||||||||||| || ||||||||||| ||||  | || ||||||| |    
T  24673206 tagagtgtcat-agtaccatattagagtggtttcaacattaaaaagtggtcttagtaccatattgga-ggtgtaaatcttgaac--tcttttacagtgta 24673301  T
Q  210 gtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgt-ggtgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctt 307  Q
    || ||||||||||||||      ||| ||||||||||  |||| |||  || |||||||||||  |||||| || ||||   |||| ||| |||||| ||    
T  24673302 gtggttaaccgcacagt------tgagcttgttttattttggaagtgttgtgggtgatagtctatcttgcataattttgaacagtgtcacgaaacgtttt 24673395  T
Q  308 aaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattct 361  Q
    ||| |||||||  || |||| |||||||||||||||||||| | || |||||||    
T  24673396 aaaaagagcgatctgatcgtaactcaacctagtaacaacttcgataaatattct 24673449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 8331190 - 8331301
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||| | |||||||| | | ||| ||||||| ||||||      |||||||||||||||||||||||||||    
T  8331190 tagaatggtggtaacaccatatttgagtggtcttaccaccataatagaatggtaacaataacatattt-----gtttcagtattaaagagtggtcttagt 8331284  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||||||||    
T  8331285 accatattagagggtgt 8331301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 37771973 - 37771862
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||| | |||||||||||||||||| |||||||| | | ||| |||||||||||||     |||||||||||||||||||| ||||| ||    
T  37771973 tagaatggtggtaatatcatatttgagtggtctcaacaccataatagaatggtaacaataccatat-----tggtttcagtattaaagagtagtcttggt 37771879  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||||||||    
T  37771878 accatattagagggtgt 37771862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 40130722 - 40130806
Alignment:
Q  274 cttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  40130722 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 40130806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 263 - 357
Target Start/End: Original strand, 4243079 - 4243174
Alignment:
Q  263 tgatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||||||||| ||| |||||||  |||||| |||||||||||||  |||||||||||||||||||||||||||| | ||||||    
T  4243079 tgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagata 4243174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 389 - 581
Target Start/End: Original strand, 40126000 - 40126192
Alignment:
Q  389 caaatacaacagtttggaa-tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattttgttgtaccaaa 487  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| |||||| |||||| ||| |||||||| ||  ||||| ||  |    
T  40126000 caaatacaacagtttggaaatccaaaaacaacaattttaagacgtttcgatctgctacgtctaccgaagaagttatttattgaggttaagttgtccctga 40126099  T
Q  488 attaaaacaaggataaatcaggctataaaaatacatattttggactgatataatgaagtgattgttgttat-aacaacgacaataagagattcac 581  Q
    |  | |  |||||||||||| |||||| |||||||| |||| |||||| |  |||||||| |||| ||||| |||||| ||| ||||| ||||||    
T  40126100 a-cacattaaggataaatcaagctatagaaatacatctttt-gactgaaacgatgaagtggttgtagttataaacaacaacactaagaaattcac 40126192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 239 - 334
Target Start/End: Original strand, 33616727 - 33616823
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaa 334  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| |||||||||||| | ||||||||||||||||||||  ||||||||||||||    
T  33616727 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaa 33616823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 19430109 - 19430011
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||||| |||  |||||||| | |||||| |||||||||| |||||||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  19430109 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19430011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 19435611 - 19435513
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||||| |||  |||||||| | |||||| |||||||||| |||||||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  19435611 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19435513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 19566258 - 19566160
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||||| |||  |||||||| | |||||| |||||||||| |||||||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  19566258 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 19571760 - 19571662
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||||| |||  |||||||| | |||||| |||||||||| |||||||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  19571760 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19571662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 31030623 - 31030525
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| ||||||| ||||||||||||| | | ||||||||||||||||||||  ||||||||||||||||    
T  31030623 tgttttatcctggagacggcgtggttgttagtctaccttgcataatttgggtagtgtcgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 31030525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 238 - 357
Target Start/End: Original strand, 2355458 - 2355579
Alignment:
Q  238 ttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggta-gtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaac 335  Q
    |||||||||| | |||| |||||||| ||||||||| |||||||||||| |  | ||| ||| |||||||||||| |||| || ||||| |||||||||     
T  2355458 ttgttttatctttgaggcggcgtggttgatagtctgtcttgcacaattttgaaaagtgtcacgaaacgtcttaaaaagagtgatatggtggtgactcaat 2355557  T
Q  336 ctagtaacaactttggtagata 357  Q
    ||||||||||||||||||||||    
T  2355558 ctagtaacaactttggtagata 2355579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 18876166 - 18876258
Alignment:
Q  16 catatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccata 108  Q
    |||||||||| |||  ||||||||| ||||| ||||||| || |||||| ||||||||||| |||| |||||||||||||||||| |||||||    
T  18876166 catatttgagtggttgtagtgccatattgatgttttggagaaattaaagttagaatggtggcaacaacatatttgagtggtctcaacaccata 18876258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 59 - 166
Target Start/End: Complemental strand, 26779373 - 26779268
Alignment:
Q  59 ttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtgg 158  Q
    |||||| || ||||||| || |||||||||||||||||||||||| ||||||| ||||  | ||||| ||||||||| ||||||||||||||||| |||     
T  26779373 ttaaagttaaaatggtg-tagcaccatatttgagtggtctcagcaacataacagagtgatatcaatatcatattaaa-tggtttcagtattaaagggtga 26779276  T
Q  159 tcttagta 166  Q
    ||||||||    
T  26779275 tcttagta 26779268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 32015795 - 32015700
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||||| ||||||||||||||||||||  |||||||||||||    
T  32015795 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 32015700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 237 - 348
Target Start/End: Original strand, 43302716 - 43302830
Alignment:
Q  237 cttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaattt--gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||||| |||||||| |||||||| |||||||||||||  ||  |||||||| |||||||||||||||| |||   |||||| |||||    
T  43302716 cttgttttatcctggaggcggcgtggttgatagtctaccttgcacaatttttggacagtgccacgaaacgtcttaaagagaacgaccgggtcgtaactca 43302815  T
Q  334 acctagtaacaactt 348  Q
     |||| |||||||||    
T  43302816 gcctaataacaactt 43302830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 12820472 - 12820387
Alignment:
Q  201 tacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg-gtgatagtctgccttgcacaattt 285  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||| || |||  ||||||| ||| |||||||||||    
T  12820472 tacagtgcagtagttagtcgcacagttgtacctgaacttgttttatcctggaggcggtgtgattgatagtttgctttgcacaattt 12820387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 333
Target Start/End: Complemental strand, 24884805 - 24884712
Alignment:
Q  241 ttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||  |||||||| | |||||| |||||||||| || ||||||||| |||||||||||||||| ||| |  |||||||||||||    
T  24884805 ttttatcctggagacggcgtggttgctagtctaccttgcacaacttaggtagtgccgcaaaacgtcttaaagaaagctacctggtcgtgactca 24884712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 168 - 334
Target Start/End: Complemental strand, 7902729 - 7902561
Alignment:
Q  168 catatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgat 266  Q
    ||||||||| | ||||| |||||||  |||   ||||||| ||||||||| |||||| |||| |||| |||||||||||||| |||  ||||||| ||||    
T  7902729 catatttgaagttgtaattctcgaatagttagatacagtgtagtagttaatcgcacaattgttgatggacttgttttatcctagagacggcgtggttgat 7902630  T
Q  267 agtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaa 334  Q
    | | || |||  |||| |||||||| || ||| |||| | |||||||||||||  ||||||||||||||    
T  7902629 aatatgtcttatacaattttgggtaatgtcacgaaacattttaaagagagcgacttggtcgtgactcaa 7902561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 17955789 - 17955884
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||| ||||||||| | |||||||||||| | |||||  |||||||||||||    
T  17955789 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 17955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 12820590 - 12820504
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa 152  Q
    |||||||| | ||||||||||||||||||||| ||  | |||| || |||||  |||||||||||||| ||||||||||||| ||||    
T  12820590 tagaatggcgataacaccatatttgagtggtcacaatatcatagcagagtggtcacaataccatattagagtggtttcagtactaaa 12820504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 471
Target Start/End: Complemental strand, 17025905 - 17025811
Alignment:
Q  377 aatttggaaagccaaatacaacagtttg-gaatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgag 471  Q
    |||||||||| |||||||||||| ||||  |||| |||||||||| ||||||||| |||| || || ||||||||| | |||| ||||||||||||    
T  17025905 aatttggaaatccaaatacaacaatttgaaaatctaaaaacaacaattttaagacgtttctatatgttatgtctaccg-agaagttacttattgag 17025811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 471
Target Start/End: Complemental strand, 17556397 - 17556303
Alignment:
Q  377 aatttggaaagccaaatacaacagtttg-gaatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgag 471  Q
    |||||||||| |||||||||||| ||||  |||| |||||||||| ||||||||| |||| || || ||||||||| | |||| ||||||||||||    
T  17556397 aatttggaaatccaaatacaacaatttgaaaatctaaaaacaacaattttaagacgtttctatatgttatgtctaccg-agaagttacttattgag 17556303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 21644081 - 21644172
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtga 329  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||    
T  21644081 tgttttatcctggagtcggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 21644172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 42514374 - 42514469
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  ||||| |||||||    
T  42514374 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcatgactca 42514469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 342
Target Start/End: Complemental strand, 13584399 - 13584341
Alignment:
Q  284 ttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaa 342  Q
    |||||||||||| | ||||||||||||||||||||  ||||||||| ||||||| ||||    
T  13584399 ttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgattcaacctggtaa 13584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 13149773 - 13149701
Alignment:
Q  292 tgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttttt 365  Q
    ||||||||||||||| ||| ||| ||| ||| ||||||||||||||| ||||||||| | |||||||| |||||    
T  13149773 tgccacaaaacgtctcaaa-agaacgacatgatcgtgactcaacctaataacaacttcgatagatattattttt 13149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 342
Target Start/End: Complemental strand, 19954342 - 19954262
Alignment:
Q  263 tgatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtc-gtgactcaacctagtaa 342  Q
    ||||||||||| ||| ||||||| ||| |||||||||||||||||||||||||||||  | ||| | |||||||||||||||    
T  19954342 tgatagtctgc-ttgtacaattttgggcagtgccacaaaacgtcttaaagagagcgatctagtctgcgactcaacctagtaa 19954262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 353
Target Start/End: Complemental strand, 29220359 - 29220245
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggt-agtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||||| ||||  ||||||| |||||||| ||||||||||||| | | |||| |||||||||||||||  |||| ||    ||||||||||||||    
T  29220359 tgttttatccttgaggcagcgtggttgatagtctaccttgcacaattttgatcagtgacacaaaacgtcttaa--agagtgacccagtcgtgactcaacc 29220262  T
Q  337 tagtaacaactttggta 353  Q
    || ||||||||| ||||    
T  29220261 tactaacaacttcggta 29220245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 2470044 - 2469989
Alignment:
Q  263 tgatagtctgccttgcacaatttgg-gtagtgccacaaaacgtcttaaagagagcga 318  Q
    ||||||||||| ||||||||||| | | |||||||||||||||||||||||||||||    
T  2470044 tgatagtctgc-ttgcacaattttgagcagtgccacaaaacgtcttaaagagagcga 2469989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 15875506 - 15875554
Alignment:
Q  61 aaagctagaatggtggtaacaccatatttgagtggtctcagcaccataa 109  Q
    |||| |||| ||||||||||||||||||||| ||||||||| |||||||    
T  15875506 aaagttagagtggtggtaacaccatatttgaatggtctcagtaccataa 15875554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 40130811 - 40130855
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  40130811 aatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 40130855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 43999258 - 43999334
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaa 342  Q
    |||||| ||||||||||||| ||||||||| | |||||| ||||||| | |||  || ||||||||||||| |||||    
T  43999258 tagtctaccttgcacaatttaggtagtgccgcgaaacgttttaaagaaaacgacctgatcgtgactcaacccagtaa 43999334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 7001956 - 7001849
Alignment:
Q  67 agaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttagt 165  Q
    |||||||| ||| || ||||||||||||||||||  || |||| | |||||  |||  | ||||||| |||| |||||||||| ||||||||||||| ||    
T  7001956 agaatggtcgtatcatcatatttgagtggtctcaaaactataatagagtggtcacatcatcatattagagtgatttcagtattaaaagagtggtctttgt 7001857  T
Q  166 accatatt 173  Q
    || |||||    
T  7001856 actatatt 7001849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 22714779 - 22714926
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaa-gctagaatggtggtaacaccatatttgagtggtctcagcaccataa 109  Q
    ||||||||||||||| | || || | |||| ||||||| ||| | || ||||| | |||||||||  ||||| ||||||||| || ||| ||||||||||    
T  22714779 atcatcatatttgagtgatcgtaataccatattgatatattgaagaagttaaatgttagaatggtcataacatcatatttgaatgatcttagcaccataa 22714878  T
Q  110 caaagtggcaacaataccatattaaagtggtttcagtattaaagagtg 157  Q
     | ||||   | | || ||||||| |||| ||||||||||||||||||    
T  22714879 aagagtgatcaaagtatcatattagagtgatttcagtattaaagagtg 22714926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 1807747 - 1807685
Alignment:
Q  34 gtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggt 96  Q
    ||||||| ||||| ||||||| || |||||| ||||||||||| ||||||||| | |||||||    
T  1807747 gtgccatattgatgttttggataaattaaagttagaatggtggcaacaccataatagagtggt 1807685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 352
Target Start/End: Complemental strand, 5884036 - 5883979
Alignment:
Q  294 ccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggt 352  Q
    ||||||||||||||||| ||||| |  |||||||||||||||| ||||| |||||||||    
T  5884036 ccacaaaacgtcttaaa-agagctacctggtcgtgactcaacccagtaataactttggt 5883979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 10933592 - 10933534
Alignment:
Q  173 ttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtag 231  Q
    |||| ||||||| ||||||||  || ||||||||||||||||||| | |||||||||||    
T  10933592 ttgaaggtgtaattctcgaacaattctctacagtgcagtagttaatcacacagttgtag 10933534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 357
Target Start/End: Complemental strand, 19915155 - 19915122
Alignment:
Q  324 tcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||||||||||| ||||||||    
T  19915155 tcgtgactcaacctagtaacaacttcggtagata 19915122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 33416517 - 33416472
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaacag 421  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||    
T  33416517 aatttggaaattcaaatacaacagtttggaaatccaaaaacaacag 33416472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 1911094 - 1911138
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||| ||| |||||||||||||||||| |||||||||||||||    
T  1911094 aatttgaaaatccaaatacaacagtttggaaatccaaaaacaaca 1911138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 29220619 - 29220583
Alignment:
Q  61 aaagctagaatggtggtaacaccatatttgagtggtc 97  Q
    |||| |||||||||||||||| |||||||||||||||    
T  29220619 aaagttagaatggtggtaacatcatatttgagtggtc 29220583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 31449991 - 31450035
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||    
T  31449991 aatttggaaatccaaatacaacactttggaaatccaaaaacaaca 31450035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 521
Target Start/End: Complemental strand, 8268617 - 8268119
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||  |||| |||| |||| | |||| |||||| ||||||||| |||||||||| ||||| |||||||||||||||||| |||||||||    
T  8268617 atcaccatatttgaatggtcgtagtaccatatagatagtttggagaacttaaagttagaatggtgttaacaacatatttgagtggtctcaacaccataac 8268518  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacgg-ttttctacagtgca 209  Q
    | ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||  ||||||| | |||||||| |||||||| |||||    
T  8268517 agagtggtaacaataccatattaaagtggtttcagtactaaagagtgatcttagtaccatatttggaggtgtaattatcgaacggtttttctacggtgca 8268418  T
Q  210 gtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctt 307  Q
    |||||||| || |||||||||| || |||||||||||| |||||||||||||| |||||||||| ||||||||| |||||  ||||||||||||||||||    
T  8268417 gtagttaatcgaacagttgtagctggacttgttttatcatggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtctt 8268318  T
Q  308 aaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-a 406  Q
    |||||||||||  ||||||||||||||  |||||||||||| |||||||| |                 ||||||||||  ||||||||||||||||| |    
T  8268317 aaagagagcgacctggtcgtgactcaatatagtaacaacttcggtagataat---------------agaatttggaaatgcaaatacaacagtttggaa 8268233  T
Q  407 atccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattttgttgtaccaaaattaaaacaaggataaatc 506  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||| |||| | || |||||| || ||| |||||||| ||||||||    
T  8268232 atccaaaaacaacaattttaagacgtttcgatctgctatgtctaccgaagaaattactaattgtggttatgttgtcccgaaa-taaaacaatgataaatc 8268134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 44422909 - 44423257
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||  ||||| ||||||| || |||||| |||||| |||  |||||||||||||| |||| ||| |||||||||    
T  44422909 atcaccatatttgagtggtcgtagtgccacattgatgttttggagaaattaaagttagaattgtgacaacaccatatttgattggtttcaacaccataac 44423008  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44423009 agagtggtaacaataccatattaaggtagtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcag 44423108  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgt-ggtgatagtctgccttgcacaatttgggt-agtgccacaaaacgtctta 308  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| | ||||||||||||||| ||||||| ||| |||||||| ||||||||||    
T  44423109 tagttaaccgcacagttgtagatggacttgttttatcctggaggcggcgtagttgatagtctgccttgaacaattttggtcagtgccacgaaacgtctta 44423208  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  || ||||||||||||||||||||||||||||||||||    
T  44423209 aagagagcgatctgatcgtgactcaacctagtaacaactttggtagata 44423257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 4930556 - 4930208
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||  |||| ||||||||| || || ||||||| || |||||| ||||||||||  | ||||||||||||||||||||| |||||||||    
T  4930556 atcaccatatttgaatggtcgtagtgccatattaatgttttggagaaattaaagttagaatggtgacagcaccatatttgagtggtctcaacaccataac 4930457  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  4930456 agagtggtaacaataccatattaaggtggtttcagtattaaagagtggtcttagtaccatatatgagggtgtaattctcgaacggttttctacagtgcag 4930357  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| ||  |||||||||||||||||| ||||||| ||||||| || ||| ||||| |||||| |||||||| ||||||||||    
T  4930356 tagttaaccgcacagttgtagttgggcttgttttatcctggaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacgtctta 4930257  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  4930256 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 4930208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 11 - 348
Target Start/End: Complemental strand, 27238565 - 27238226
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||||||||||| || ||| |  |||||||||||||||||||||||||||||||||||||||||||||    
T  27238565 atcaccatatttgagtggtcgtagtgccatattgatattttggagaaattacaattagaatggtggtaacaccatatttgagtggtctcagcaccataac 27238466  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    ||||||| |||| || ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  27238465 aaagtggtaacattatcatattaaagtggtttcagaattaaagagtggtcttagtatcatatttgagggtgtaaatctcgaacgattttctacagtgcag 27238366  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg-gtgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| | | ||||||||| || |||||||||||| || ||| ||||||  |||||||||||||| ||||| |||| | |||||||||||||||||||    
T  27238365 tagttaagcacgcagttgtagctggacttgttttatcttgcaggcggcgtgattgatagtctgccttacacaattttgagcagtgccacaaaacgtctta 27238266  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  27238265 aagagagcgacctggtcgtgactcaacctagtaacaactt 27238226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 11 - 471
Target Start/End: Original strand, 10388140 - 10388596
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| | || ||||||||| ||||||||||||| || |||||| || | | |||||||||||| ||||||||||||||||||||||||     
T  10388140 atcaccatatttgagtgatcgtagtgccatattgatattttggagaaattaaagttaaagttgtggtaacacca-atttgagtggtctcagcaccataat 10388238  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||| || |||||||    
T  10388239 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtattagtaccttatttgagggtgtaaatctcgaacaattttttagagtgcag 10388338  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaa 309  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||| ||||| || ||| ||||  | ||||||| ||||| | ||||||||||||||||||    
T  10388339 tagttaatcgcacagttgtagttgagtttgttttatcctggaggcggcgttgttgat-gtctatcatgcacaacttgggcaatgccacaaaacgtcttaa 10388437  T
Q  310 agagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttg-gaat 408  Q
    |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||          |||||||||| ||||||||||||| |||  |||    
T  10388438 agagagcgacctggtcgtgactcaacctagtaacaacttcggtagatattctttttcaaaatag---aatttggaaatccaaatacaacagcttgaaaat 10388534  T
Q  409 ccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgag 471  Q
    | |||||||||| ||||||||| |||  | ||| ||||||||  |||||||||||||||||||    
T  10388535 ctaaaaacaacaattttaagacgttt-taactgttatgtctatcgaagaaattacttattgag 10388596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 16 - 357
Target Start/End: Original strand, 13314014 - 13314356
Alignment:
Q  16 catatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagt 115  Q
    |||||||||| |||| ||||||||| ||||| ||||||| || |||||| |||||| |||||||||| ||||||||||||||||| |||||||||| |||    
T  13314014 catatttgagtggtcgtagtgccatattgatgttttggagaaattaaagttagaatagtggtaacacaatatttgagtggtctcaacaccataacagagt 13314113  T
Q  116 ggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagtt 215  Q
    || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  13314114 ggtaacaataccatattaaagtggtttcagtatt-aagagtggtcttagtaccatatttggaggtgtaattctcgaacggttttctacagtgcagtagtt 13314212  T
Q  216 aaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagag 313  Q
    ||  | |||||||||| ||| |||||||||||||||||| | ||||| ||||||||| |||||||||| |||||| ||| |||| |||||||||||||||    
T  13314213 aattgaacagttgtagctgagcttgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacgtcttaaagag 13314312  T
Q  314 agcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||  |||||||||||||||||||||||||||  ||||||||    
T  13314313 agcgatctggtcgtgactcaacctagtaacaactacggtagata 13314356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 30 - 285
Target Start/End: Complemental strand, 12799714 - 12799458
Alignment:
Q  30 catagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccat 129  Q
    |||||||| || ||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  12799714 catagtgctatattgatattttggagaaattaaagttagaatggtggcaacaccatatttgagtggtctcaacaccataacaaagtggtaacaataccat 12799615  T
Q  130 attaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgt 229  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  12799614 attaaagtgatttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctgcaatgcagtagttaaccgcacagttgt 12799515  T
Q  230 agatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaattt 285  Q
    || || |||| |||||||||||| ||||||||| |||||||||||||||||||||||    
T  12799514 agctggacttattttatcctggatgtggcgtggttgatagtctgccttgcacaattt 12799458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 11 - 481
Target Start/End: Complemental strand, 21671518 - 21671049
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||| ||| |||||||||||||||| |||||| || |||||||||||||||||||||||||  ||||| |||||||      
T  21671518 atcaccatatttgagtggtcgtagtgtcatattgatattttggaaaaattaaagttataatggtggtaacaccatatttgagttatctcaacaccatatt 21671419  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgca 209  Q
    ||||||| || ||||||||||||||||||||||| |||| ||||| ||||||| || ||||||| || ||| ||||||||||||| ||||||||| ||||    
T  21671418 aaagtggtaataataccatattaaagtggtttcattattaaaagaatggtctttgtcccatattgga-ggtttaaatctcgaacgattttctacactgca 21671320  T
Q  210 gtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcg-tggtgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctt 307  Q
    |||||||||||||||||||||| ||| |||||||||| ||||| | |  | || |||| ||||||||||||||| |||||| |||||||| |||| ||||    
T  21671319 gtagttaaccgcacagttgtaggtgagcttgttttattctggatgcgaagttgttgattgtctgccttgcacaactttgggcagtgccactaaacttctt 21671220  T
Q  308 aaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-a 406  Q
    |||||||| |   | ||||||||||||||||||||||||||  | ||||||||| ||||          |||||||||| ||||||| ||  |||||| |    
T  21671219 aaagagagggtcctagtcgtgactcaacctagtaacaacttcagcagatattctatttcaaaatag---aatttggaaatccaaataaaattgtttggaa 21671123  T
Q  407 atccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattttgttgt 481  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  21671122 atccaaaaacaacaattttaagacgtttcga-ctgctatgtctaccgaagaaattacttattgagattctgttgt 21671049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 26341528 - 26341174
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatt------tgagtggtctcagcac 104  Q
    |||| |||||||||| ||||  ||| |||| |||||| |||||| ||||||||| ||||||| |  ||||||||||||      |||||||||||||||     
T  26341528 atcaccatatttgagtggtcggagtaccatattgatagtttggagaacttaaagttagaatgatattaacaccatattgatatttgagtggtctcagcat 26341429  T
Q  105 cataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctaca 204  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||| | |||||||||    
T  26341428 cataacagagtggtaacaatatcatattaaagtggtttcagtattaaagagtggtcttagtaccatatttggaggtgtaattcttgaatgattttctaca 26341329  T
Q  205 gtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaac 302  Q
    ||| ||||||||| || |||||||||| || ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| |||     
T  26341328 gtgtagtagttaatcgaacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaat 26341229  T
Q  303 gtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  26341228 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 26341174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 66 - 357
Target Start/End: Original strand, 44510504 - 44510797
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| | ||| ||||||  |||||||||||||||||||||||||| | ||||||||||    
T  44510504 tagaatggtggtaacaccatatttgagtggtctcaacaacataacagaatggtaacaatgtcatattaaagtggtttcagtattaaaagtgtggtcttag 44510603  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||| ||||||||||||||||| || ||| |||||||||||||||||| ||||||| |    
T  44510604 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagaagttaaccgcacagttgcagctgagcttgttttatcctggaggcggcgtggtt 44510702  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||| ||||||||| |||||  ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||| ||||||||    
T  44510703 gatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcaatctggtcgtgactcaacctagtaacaacttcggtagata 44510797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 14 - 261
Target Start/End: Complemental strand, 30258420 - 30258173
Alignment:
Q  14 atcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaa 113  Q
    |||||||||||| |||| ||||||||| |||||| |||  | || |||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  30258420 atcatatttgagtggtcgtagtgccatattgatactttaaagaaattaaagttagaatggtggtaacaccatatttgagtggtctcagcaccataacata 30258321  T
Q  114 gtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtag 213  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||  ||||||||||||||||||    
T  30258320 gtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgaaggtgtaaatttcgaacaattttctacagtgcagtag 30258221  T
Q  214 ttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg 261  Q
    |||||||||| ||||||| || ||||||||||||||||||| ||||||    
T  30258220 ttaaccgcactgttgtagctggacttgttttatcctggaggcggcgtg 30258173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 78 - 366
Target Start/End: Original strand, 3357470 - 3357761
Alignment:
Q  78 aacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgag 177  Q
    ||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||| ||||||||||||| |||||||||||||||| ||    
T  3357470 aacactatatttgagtggtctcagcaccataacagagtggtaacagtaccatattaaagtggtttcggtattaaagagtgatcttagtaccatattttag 3357569  T
Q  178 ggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttg-ttttatcctggaggtggcgtgg-tgatagtctgcct 275  Q
    ||||||||||| ||||| |||||||||||||| | ||||||| |||| |||||| ||   ||| ||||||| |||||  ||||||| |||||||||||||    
T  3357570 ggtgtaaatcttgaacgattttctacagtgcaatggttaaccacacaattgtagttgtgtttgtttttatcatggagacggcgtggttgatagtctgcct 3357669  T
Q  276 tgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttc 366  Q
    ||||||| ||||||  || || | ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| ||||||    
T  3357670 tgcacaactttgggctgtaccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagatattatttttc 3357761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 3045878 - 3045679
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||| ||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3045878 atcaccatatttgagtggtcgtagtgtcatattgatattttagaaaacttaaagttagaatggtggtaacaccatatttgagtggtctcagcaccataac 3045779  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3045778 agagtggtaacaataccatattaaaatggtttcaatattaaagagcggtcttagtaccatatttgagggtgtaaatctcgaacgattttctacagtgcag 3045679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 32 - 309
Target Start/End: Original strand, 13142694 - 13142973
Alignment:
Q  32 tagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatat 131  Q
    |||| |||| ||||||||||| | ||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  13142694 tagttccatattgatattttgtagaacttgaagaaagaatggtggtaacaccatatttaagtggtctcagcaccataacaaagtggtaacaataccatat 13142793  T
Q  132 taaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtag 231  Q
    ||||||||||||| |||||||||||| |||||||||||||||| | |||||||||||||||| |||||||| |||||| |||||| ||  ||||||||||    
T  13142794 taaagtggtttcaatattaaagagtgatcttagtaccatatttaacggtgtaaatctcgaacagttttctatagtgcaatagttagccttacagttgtag 13142893  T
Q  232 atgaacttgttttatcctggaggtggcg-tggtgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaa 309  Q
     ||||||||||||||||||| || |||| || ||| |||||| | ||||||| ||||  ||||||||| |||||||||||    
T  13142894 ctgaacttgttttatcctggtggcggcgttgttgaaagtctgtcatgcacaactttgactagtgccacgaaacgtcttaa 13142973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 90 - 365
Target Start/End: Complemental strand, 12254322 - 12254046
Alignment:
Q  90 gagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctc 189  Q
    ||||||||||| |||||||||| ||||| | ||||| |||||||||||||||||||||  ||||| ||| ||||||||||||||||||| ||||||||||    
T  12254322 gagtggtctcaacaccataacagagtggtagcaatatcatattaaagtggtttcagtaggaaagactggacttagtaccatatttgagg-tgtaaatctc 12254224  T
Q  190 gaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg-gtgatagtctgccttgcacaa-tttgg 287  Q
     ||||||||||||||  ||| ||||||||||||||||||||| |||||||||||||||||| ||| ||||||  |||||||||||||||||||| ||| |    
T  12254223 aaacggttttctacacagcattagttaaccgcacagttgtagctgaacttgttttatcctgtaggcggcgtgattgatagtctgccttgcacaactttag 12254124  T
Q  288 gtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttttt 365  Q
    | ||||||||||||| |||||||||||||||  |||||| |||||||||| |||||||||| | ||||||||| ||||    
T  12254123 gcagtgccacaaaacatcttaaagagagcgacctggtcgcgactcaacctggtaacaacttcgatagatattcgtttt 12254046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 42626363 - 42626603
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||  ||||||||| || || ||||||| || |||||| ||||||||||| ||||||||||||||||||||||| |||||||||    
T  42626363 atcaccatatttgagtggttgtagtgccatattaatgttttggagaaattaaagttagaatggtggcaacaccatatttgagtggtctcaacaccataac 42626462  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  42626463 agagtggtaacaataccatattaaggtggttttaatattaaagagtgatcttagtaccatatttgagggtgtaattctcgaacgattttctacagtgcag 42626562  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctgg 251  Q
    || |||||||||||||||||| || |||| |||||||||||    
T  42626563 taattaaccgcacagttgtagctggacttattttatcctgg 42626603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 66 - 348
Target Start/End: Complemental strand, 4579780 - 4579492
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa---gagtggtctt 162  Q
    ||||||||||||||||||||||||||  ||||| || || |||| | | |||  |||||||||||| |  ||||||||| ||||||    |||||| |||    
T  4579780 tagaatggtggtaacaccatatttgaacggtcttagtactataatagaatggtcacaataccatataatcgtggtttcattattaatttcgagtggcctt 4579681  T
Q  163 agta-ccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg 261  Q
    | || |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| ||||||    
T  4579680 aatagccatatttgagggtgtaattcttgaacggttttctacagtgcagtagttaatcgcacagttgtagctggacttgttttatcctggaggcggcgtg 4579581  T
Q  262 g-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    | |||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  4579580 gttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 4579492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 66 - 355
Target Start/End: Original strand, 9650796 - 9651085
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    |||||||||||||||| |||||||||||||||||| |||||||| | |||||  | | |||||||||     ||||||||||||||| ||||||||||||    
T  9650796 tagaatggtggtaacatcatatttgagtggtctcaacaccataatagagtggtcatagtaccatatt-----ggtttcagtattaaaagagtggtcttag 9650890  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtaga---tgaacttgttttatcctggaggtggcgtg 261  Q
    |||||||||  | | ||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||    || ||||||||||||||||||| ||||||    
T  9650891 taccatattaaaag-tgtaattctcgaacggttttctacagtgcagtagtcaaccgtacagttgcagcagctggacttgttttatcctggaggcggcgtg 9650989  T
Q  262 gt-gatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtaga 355  Q
    || ||||||||| |||||||||||| ||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  9650990 gttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtaga 9651085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 66 - 335
Target Start/End: Complemental strand, 23866330 - 23866065
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    |||||||||||||||||||||||| |||||||||| ||| |||| | |||||  | | |||||||||     |||||||| |||||| ||||||||||||    
T  23866330 tagaatggtggtaacaccatattt-agtggtctcaacacaataatagagtggtcatagtaccatatt-----ggtttcagcattaaaagagtggtcttag 23866237  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-t 263  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| ||||||| |    
T  23866236 taccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctgagcttgttttatcctggaggcggcgtggtt 23866138  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaac 335  Q
    ||||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||  |||||||||||||||    
T  23866137 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 23866065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 68 - 420
Target Start/End: Original strand, 26286975 - 26287339
Alignment:
Q  68 gaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttagta 166  Q
    ||||||||||||||||||||||||||||||||| ||| |||| | ||||| |||| ||||||||||||||||||||||||||||| || ||||||| |||    
T  26286975 gaatggtggtaacaccatatttgagtggtctca-cacgataatagagtggtaacagtaccatattaaagtggtttcagtattaaaagaatggtcttggta 26287073  T
Q  167 ccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg---- 262  Q
    ||||||| |||| |||||| |||||||| ||||||| ||||||||||||||| |||||||||||| || | ||||||||||||||||| |||||||        
T  26287074 ccatattggagg-tgtaaagctcgaacgattttctatagtgcagtagttaactgcacagttgtagctggatttgttttatcctggaggcggcgtggttga 26287172  T
Q  263 ----------tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttgg 351  Q
              |||||||||||||| ||||| |||||  | ||||| ||||| ||||||||| ||||  ||||||||||||||||||||||||||||| ||    
T  26287173 tagtctgcgttgatagtctgccttacacaattttggacaatgccaaaaaacatcttaaagaaagcggcatggtcgtgactcaacctagtaacaacttcgg 26287272  T
Q  352 tagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacag-tttggaatccaaaaacaaca 420  Q
    |||| ||| ||||||          |||||||||| ||||||||||||| |||| |||||||||||||||    
T  26287273 tagagattatttttcaaaatag---aatttggaaatccaaatacaacagttttgaaatccaaaaacaaca 26287339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 66 - 345
Target Start/End: Complemental strand, 3880263 - 3879983
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | ||||| |||| || |||||||||||||||||| ||||||||||||||||||||    
T  3880263 tagaatggtgataacaccatatttgagtggtctcagcaccataatagagtggtaacagtatcatattaaagtggtttcaatattaaagagtggtcttagt 3880164  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    | |||||||||| |||||| ||||||||| |||||||||||||||||||||||| || ||||||||  |  |   |||||||||||||| ||||||| ||    
T  3880163 atcatatttgagagtgtaattctcgaacgattttctacagtgcagtagttaaccacatagttgtagtggggc---ttttatcctggaggcggcgtggttg 3880067  T
Q  265 atagtctgccttgcacaa--tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactc-aacctagtaacaa 345  Q
    ||||||| |||| |||||  ||||   |||| |||||||||||||||||| || ||  || ||||||||| |||||||||||||    
T  3880066 atagtcttccttacacaaattttgaacagtgtcacaaaacgtcttaaagaaagtgacctgatcgtgactcaaacctagtaacaa 3879983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 114 - 348
Target Start/End: Original strand, 25543237 - 25543473
Alignment:
Q  114 gtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagta 212  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  25543237 gtggtaacaataccatattaaagtggtttcagtattaaaagagtggtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagta 25543335  T
Q  213 gttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaa 310  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |  |||| ||||||| |  ||||||||| ||| || ||| |||| ||||||||||||    
T  25543336 gttaaccgcacagttgtagctagacttgttttatcctggaggcgatgtggttgatagtttatcttgcacaattttaggcagtaccacgaaacgtcttaaa 25543435  T
Q  311 gagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    ||| ||||  || | |||||||||||||||||||||||    
T  25543436 gagtgcgacctgattgtgactcaacctagtaacaactt 25543473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 124 - 356
Target Start/End: Original strand, 23246814 - 23247052
Alignment:
Q  124 taccatattaaagtggtttcagtattaaa---gagtggtcttagta-ccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaacc 219  Q
    |||||||| | |||||||||| |||||||   |||||| |||  || |||||||||||||||||| | | ||||||||||||| |   |||||||||| |    
T  23246814 taccatataatagtggtttcaatattaaatccgagtggcctttatagccatatttgagggtgtaattttggaacggttttctataaaacagtagttaatc 23246913  T
Q  220 gcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcg 317  Q
    |||||||||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  23246914 gcacagttgtaggtgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagagcg 23247013  T
Q  318 aaatggtcgtgactcaacctagtaacaactttggtagat 356  Q
    |  |||||||||||||| ||||||||||||| |||||||    
T  23247014 acctggtcgtgactcaatctagtaacaacttcggtagat 23247052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 8076307 - 8076025
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    ||||| ||||||||||||||||||||||||||||| |||| ||| | |||||  | | |||||||||     |||||||  |||||| ||||||||||||    
T  8076307 tagaacggtggtaacaccatatttgagtggtctcaacaccgtaatagagtggtcatagtaccatatt-----ggtttcaacattaaaagagtggtcttag 8076213  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt- 263  Q
    ||||||||| || ||||||| |||||||| ||||||||||||     |||||| |||||||||| || ||| ||||||||||||||||||  |||||||     
T  8076212 taccatatt-gaaggtgtaa-tctcgaacagttttctacagt-----agttaatcgcacagttgcagctgagcttgttttatcctggaggcagcgtggtt 8076120  T
Q  264 gatagtctgccttgcacaatttg-ggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||| ||||||||||||  || |||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||  |||||||    
T  8076119 gatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacccagtaacaacttcagtagata 8076025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 66 - 348
Target Start/End: Complemental strand, 16372665 - 16372382
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa---gagtggtctt 162  Q
    |||||||||||||| | ||||||||||||||||||| ||||||  | | || | ||| |||||||| | ||||||||||||||||||   |||||| |||    
T  16372665 tagaatggtggtaaaagcatatttgagtggtctcagtaccatagtagaatgaccacagtaccatataatagtggtttcagtattaaattcgagtggcctt 16372566  T
Q  163 agta-ccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg 261  Q
    | || |||||||||| ||| ||| |||| |||| |||||||||||| ||||||||| |||| ||| ||||  | |||||||||||| |||||| | |||     
T  16372565 aatagccatatttgatggtttaattctcaaacgattttctacagtgaagtagttaatcgcatagt-gtagtcgcacttgttttatcttggaggcgacgt- 16372468  T
Q  262 gtgatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
     |||||||||| ||||||| || | ||||||||||| |||| |||||||||||||||  ||||||||||||||||||||||||||||    
T  16372467 -tgatagtctgtcttgcacgatcttggtagtgccacgaaacatcttaaagagagcgacttggtcgtgactcaacctagtaacaactt 16372382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 150 - 353
Target Start/End: Complemental strand, 9008346 - 9008142
Alignment:
Q  150 aaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcct 249  Q
    |||||||| | |||||| |||||| || ||||||| ||||||||| |||||||||||||||||||||| | ||||||||||| || ||||||||||||||    
T  9008346 aaagagtgattttagtatcatatt-gaaggtgtaattctcgaacgattttctacagtgcagtagttaatcacacagttgtagttggacttgttttatcct 9008248  T
Q  250 ggaggtggcgtggt-gatagtctgccttgcacaatttgg-gtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaact 347  Q
    |||||   | || | ||||| |||||||||||||||| | |||||| ||| ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  9008247 ggaggcttcatgattgatagcctgccttgcacaattttgagtagtgtcactaaacgtcttaaagagagggacatggtcgtgactcaacctagtaacaact 9008148  T
Q  348 ttggta 353  Q
    ||||||    
T  9008147 ttggta 9008142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 71 - 318
Target Start/End: Complemental strand, 3284991 - 3284741
Alignment:
Q  71 tggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccat 170  Q
    |||| ||| ||| |||||||| ||||||||||||||||||| ||| | || |||||| |||||||||||||||   ||||||||||||||| ||||||||    
T  3284991 tggtcgtagcactatatttgattggtctcagcaccataacagagtagtaaaaataccttattaaagtggtttcgacattaaagagtggtctcagtaccat 3284892  T
Q  171 atttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttg-ttttatcctggaggtggcgtgg-tgatag 268  Q
    |||||||||||||| |||||||||||||||||  |||| |||||||||||||| ||||||| |||  ||| ||||||| || ||  || |||| ||||||    
T  3284891 atttgagggtgtaattctcgaacggttttctattgtgcggtagttaaccgcacggttgtagctgagtttgtttttatcatgaagacggtgtggttgatag 3284792  T
Q  269 tctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcga 318  Q
    |||| ||||||||| ||||   |||  ||| |||| |||||||||||||||    
T  3284791 tctgtcttgcacaagtttgaacagtagcacgaaacatcttaaagagagcga 3284741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 180 - 366
Target Start/End: Complemental strand, 29151088 - 29150900
Alignment:
Q  180 tgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgc 278  Q
    |||||||||| |||||| ||||| | ||||  |||||| |||  |||||||| ||||||| ||||||| |||||| | |||||| |||||| ||||||||    
T  29151088 tgtaaatctcaaacggtcttctataatgcaaaagttaagcgcgtagttgtagctgaacttattttatcttggaggcgacgtggttgatagtttgccttgc 29150989  T
Q  279 acaatttgg-gtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttc 366  Q
    ||||||| | | |||| ||| |||||||||||| |||||||  |||||||||||||||||||||||||||| |||| ||||||||||||    
T  29150988 acaattttgagcagtgtcacgaaacgtcttaaaaagagcgatctggtcgtgactcaacctagtaacaacttcggtatatattctttttc 29150900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 78 - 308
Target Start/End: Original strand, 6590818 - 6591054
Alignment:
Q  78 aacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa---gagtggtcttagta-ccatatt 173  Q
    |||||||||||||| ||||||  | ||||||| | | |||  | | |||||||| | | ||||||||||||||||   |||||| |||| || |||||||    
T  6590818 aacaccatatttgaatggtcttggtaccataatagaatggttatagtaccatataataatggtttcagtattaaattcgagtggccttaatagccatatt 6590917  T
Q  174 tgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctg 272  Q
    ||||||||||| |||| |||| ||||||||| || ||||||||| | ||||||| ||  |||||||||||||||||| ||| ||||||| ||||||||||    
T  6590918 tgagggtgtaattctcaaacgattttctacaatgtagtagttaatcacacagttataactgaacttgttttatcctgaaggcggcgtggttgatagtctg 6591017  T
Q  273 ccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||| ||| |  |||||||||||||||||||    
T  6591018 ccttgcacaattttagacagtgccacaaaacgtctta 6591054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 61 - 253
Target Start/End: Complemental strand, 23318257 - 23318067
Alignment:
Q  61 aaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtc 160  Q
    |||| |||||||||| ||||| ||||||||| ||| |||| ||| |||| | ||||   ||||| |||||||| ||||||||||||||||||||||||||    
T  23318257 aaagttagaatggtgataacatcatatttgaatggcctcatcactataatagagtgatcacaatgccatattagagtggtttcagtattaaagagtggtc 23318158  T
Q  161 ttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggag 253  Q
    ||||||||||||| || |||||||||||||| |  |||| |||   ||| ||||||||||||||||| |||  | || |||||||||||||||    
T  23318157 ttagtaccatattgga-ggtgtaaatctcgaccatttttgtacgaagcaatagttaaccgcacagttttagccg-acctgttttatcctggag 23318067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 40865186 - 40865297
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||| | |||||||| | | ||| |||||||||||||     |||||||||||||||||||||||||||||    
T  40865186 tagaatggtggtaacaccatatttgagtggtcttaacaccataatagaatggtaacaataccatat-----tggtttcagtattaaagagtggtcttagt 40865280  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||||||||    
T  40865281 accatattagagggtgt 40865297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 19640560 - 19640449
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||||||||||| ||||||||||||||||||| | ||||   ||||||||||||     |||||| |||||||||||||||| |||||    
T  19640560 tagaatggtggtaacaccatattttagtggtctcagcaccataatagagtgttcacaataccatat-----tggttttagtattaaagagtggtgttagt 19640466  T
Q  166 accatatttgagggtgt 182  Q
    |||||||||||||||||    
T  19640465 accatatttgagggtgt 19640449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 27256504 - 27256393
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | | ||| || ||||||||||     |||||||||||||||| ||||||||||||    
T  27256504 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagaatggtaataataccatat-----tggtttcagtattaaatagtggtcttagt 27256410  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||||||||    
T  27256409 accatattagagggtgt 27256393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 24528449 - 24528351
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| ||||||| |||| ||||||||||||||||||||||  ||||||||||||||||    
T  24528449 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtaatgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 24528351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 263 - 357
Target Start/End: Original strand, 42627222 - 42627318
Alignment:
Q  263 tgatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacct-agtaacaactttggtagata 357  Q
    ||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||  ||||||||| ||||||| ||||||||||| ||||||||    
T  42627222 tgatagtctgctttgcacaattttgggttgtgccacgaaacgtcttaaagagagcgacctggtcgtgaatcaacctaagtaacaacttcggtagata 42627318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 15642495 - 15642368
Alignment:
Q  17 atatttgagcggtcatagtgccattttgatattttggaaaacttaaa-gctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagt 115  Q
    ||||||||| |||| |||| |||| ||||||||||||| |||||||| | |||||||||| ||| ||||||| ||| |||||| |||||||||| | |||    
T  15642495 atatttgagtggtcgtagtaccatcttgatattttggagaacttaaaggttagaatggtgataataccatatctgaatggtcttagcaccataagagagt 15642396  T
Q  116 ggcaacaataccatattaaagtggtttc 143  Q
    ||  ||| |||||||||  |||||||||    
T  15642395 ggtcacagtaccatatttgagtggtttc 15642368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 377 - 523
Target Start/End: Complemental strand, 30256824 - 30256679
Alignment:
Q  377 aatttggaaagccaaatacaacagtttggaa-tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattt 475  Q
    |||||| ||| |||||||||| |||||  || ||||||||||||| ||| ||||| |||||| ||  ||||||||  |||||||||||||||||||  ||    
T  30256824 aatttgcaaatccaaatacaatagtttataaatccaaaaacaacaatttgaagacgtttcga-ctaatatgtctatcgaagaaattacttattgaggctt 30256726  T
Q  476 tgttgtaccaaaattaaaacaaggataaatcaggctataaaaatacat 523  Q
     ||||| || |||| ||||||||||||||||| |||||| ||||||||    
T  30256725 cgttgtccctaaat-aaaacaaggataaatcaagctatagaaatacat 30256679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 411 - 585
Target Start/End: Complemental strand, 19640193 - 19640023
Alignment:
Q  411 aaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattttgttgtaccaaaattaaaacaaggataaatcaggc 510  Q
    |||||||||| ||||||||  |||| | ||||||||||||| ||||||||||||||||||  ||| ||||| || ||||  ||| |||||||||  | ||    
T  19640193 aaaaacaacaattttaagatgtttcaa-ctgctatgtctaccgaagaaattacttattgaagtttcgttgtccctaaatacaaa-aaggataaa--aagc 19640098  T
Q  511 tataaaaatacatattttggactgat-ataatgaagtgattgttgttataacaacgacaataagagattcacatat 585  Q
    |||| |||||||||| |   |||||  |||||||||||||||||||||| ||||| ||| ||||| ||||||||||    
T  19640097 tatagaaatacatatctat-actgaacataatgaagtgattgttgttatgacaacaacactaagaaattcacatat 19640023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 238 - 336
Target Start/End: Complemental strand, 9973558 - 9973459
Alignment:
Q  238 ttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||||||||||  |||||||| | | |||| |||||||||| |||| ||||||| | |||||||||||||| |||||  ||||||||||||||||    
T  9973558 ttgttttatcctggagacggcgtggttgttcgtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaacc 9973459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 197 - 366
Target Start/End: Complemental strand, 15642371 - 15642200
Alignment:
Q  197 tttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgt-ggtgatagtctgccttgcacaa-tttgggtagtgc 294  Q
    |||||| |||||||||||||||||  | ||||||| ||| | |||||| ||||||||| | ||| | ||||||| || ||| ||||| ||||| |||||     
T  15642371 tttctatagtgcagtagttaaccgtgccgttgtagctgagcctgttttgtcctggaggcgacgtagttgatagtttgtcttccacaattttggatagtgt 15642272  T
Q  295 cacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttc 366  Q
    ||  |||||||||||| |||||||  || ||||||| |||    |||||||||| |||||||||||||||||    
T  15642271 catgaaacgtcttaaaaagagcgacctgatcgtgacacaattctgtaacaacttcggtagatattctttttc 15642200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 33238097 - 33238002
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  33238097 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 33238002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 47999070 - 47998975
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  47999070 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 47998975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 357
Target Start/End: Complemental strand, 30256922 - 30256829
Alignment:
Q  265 atagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||| ||||||||||| ||| |||||||| ||| |||||||| | |||||  ||||||||||||||||| |||| ||||| ||||||||    
T  30256922 atagtctgctttgcacaattttgggcagtgccacgaaatgtcttaaaaacagcgatctggtcgtgactcaaccttgtaaaaacttcggtagata 30256829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 2234630 - 2234725
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||| ||||||||| | |||||||||||||| ||| |  |||||||||||||    
T  2234630 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcaacctggtcgtgactca 2234725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 16539412 - 16539507
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  16539412 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 16539507  T

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Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 16626250 - 16626155
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  16626250 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 16626155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 32212682 - 32212749
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| ||||||||||||| ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  32212682 tagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 32212749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 33243274 - 33243179
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||| ||  |||||||||||||    
T  33243274 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagtgacctggtcgtgactca 33243179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 42572040 - 42571945
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  42572040 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 42571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 47993895 - 47993800
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||| ||||||||    
T  47993895 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggttgtgactca 47993800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 450
Target Start/End: Original strand, 13314361 - 13314435
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaagacatttcgatctgctatgtcta 450  Q
    |||||||||| |||||||||||||||||| || |||||||||| | ||||||||| |||  ||||||||||||||    
T  13314361 aatttggaaatccaaatacaacagtttggaaacccaaaaacaataattttaagacgttttaatctgctatgtcta 13314435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 3356868 - 3356957
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctca 100  Q
    |||| |||||||||  |||| |||| || | |||||| |||||| |||||| || |||||| ||| ||||||||||||||||||||||||    
T  3356868 atcaccatatttgattggtcgtagtaccgtattgatagtttggagaacttacagttagaattgtgataacaccatatttgagtggtctca 3356957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 33226509 - 33226416
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgact 331  Q
    ||||||||||||| |  |||||||| | |||||| ||||||| || || ||||||||| | ||||||||||||||||||||  |||||||||||    
T  33226509 tgttttatcctggtgacggcgtggttgttagtctaccttgcataacttaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgact 33226416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 45748599 - 45748647
Alignment:
Q  196 ttttctacagtgcagtagttaaccgcacagttgtagatgaacttgtttt 244  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  45748599 ttttctacagtgcagtagttaatcgcatagttgtagttgaacttgtttt 45748647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 336
Target Start/End: Original strand, 28292506 - 28292600
Alignment:
Q  242 tttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||||||  |||||||| | |||||| |||||||||| |||| ||||||| | |||||||||||| |||||||  ||||||||||| ||||    
T  28292506 tttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaa-agagcgacctggtcgtgacttaacc 28292600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 47177147 - 47177214
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  47177147 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 47177214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 97
Target Start/End: Complemental strand, 10498411 - 10498380
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtc 97  Q
    ||||||||||||||||||||||||||||||||    
T  10498411 tagaatggtggtaacaccatatttgagtggtc 10498380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 97
Target Start/End: Complemental strand, 10503440 - 10503409
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtc 97  Q
    ||||||||||||||||||||||||||||||||    
T  10503440 tagaatggtggtaacaccatatttgagtggtc 10503409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 12934492 - 12934397
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| |  ||||||||| | ||| |||||||||| |||||  |||||||||||||    
T  12934492 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactcaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactca 12934397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 17495470 - 17495403
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| |||||||||| || ||||||||| | |||||||||||| | |||||  |||||||||||||    
T  17495470 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 17495403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 17557744 - 17557811
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| |||||||||| || ||||||||| | |||||||||||| | |||||  |||||||||||||    
T  17557744 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 17557811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 21081081 - 21081136
Alignment:
Q  278 cacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||| ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  21081081 cacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21081136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 43892953 - 43892858
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||| | |||||||||| || |||||||||   |||||||||||||| |||||  |||||||||||||    
T  43892953 tgttttatcctggagacggcgcggttgctagtttaccttgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctggtcgtgactca 43892858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 9008418 - 9008377
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccat 107  Q
    ||||||||||||| |||||||||||||||||| || ||||||    
T  9008418 tagaatggtggtagcaccatatttgagtggtcccaacaccat 9008377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 23318053 - 23317989
Alignment:
Q  276 tgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagta 341  Q
    |||||||||| |||||||||||||||| ||||||| | |||||  || ||||||||||| ||||||    
T  23318053 tgcacaattttggtagtgccacaaaacatcttaaa-aaagcgacctgatcgtgactcaatctagta 23317989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 1289358 - 1289413
Alignment:
Q  263 tgatagtctgccttgcacaatttgg-gtagtgccacaaaacgtcttaaagagagcga 318  Q
    ||||||||||| ||||| ||||| | |||||| ||||||||||||||||||||||||    
T  1289358 tgatagtctgc-ttgcataattttgagtagtgtcacaaaacgtcttaaagagagcga 1289413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 6898381 - 6898436
Alignment:
Q  263 tgatagtctgccttgcacaatttgggt-agtgccacaaaacgtcttaaagagagcga 318  Q
    ||||||||||| ||||||||||| ||  ||||||||||||| |||||||||||||||    
T  6898381 tgatagtctgc-ttgcacaattttggacagtgccacaaaacatcttaaagagagcga 6898436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 239 - 318
Target Start/End: Original strand, 19309611 - 19309691
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcga 318  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||| ||||| | |||||||||||||| |||||    
T  19309611 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtggtgccgcgaaacgtcttaaagacagcga 19309691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 213; Significance: 1e-116; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 6407633 - 6407980
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| || | |||||| |||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  6407633 atcaccatatttgagtggtcgtagtaccgtattgatagtttggaaaacttaaagttagaatggtattaacaccatatttgagtggtctcagcaccataac 6407732  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||| ||    
T  6407733 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttggaggtgtaattcttgaacggttttctacagtg-ag 6407831  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||| ||||||||||| ||| |||| |||||| |||||||| |||||||||     
T  6407832 tagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgctttgtacaattttgggcagtgccacgaaacgtcttc 6407931  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  || ||||||||||||||||||||||||| ||||||||    
T  6407932 aagagagcgacctgatcgtgactcaacctagtaacaacttcggtagata 6407980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 13 - 357
Target Start/End: Complemental strand, 12689292 - 12688946
Alignment:
Q  13 catcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaa 112  Q
    ||||||||||||| |||||||||| ||| ||||| ||||||| || |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||     
T  12689292 catcatatttgagtggtcatagtgtcatattgatgttttggagaaattaaagttagaatggtggcaacaccatatttgagtggtctcaacaccataacag 12689193  T
Q  113 agtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagta 212  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||| |||||| ||||||| |||||||||||| | |||||||||||||||||||| ||||    
T  12689192 agtggtaacaatacgatattaaagtggtttcaatattaaagagtcgtcttaataccataattgagggtgtaattgtcgaacggttttctacagtgtagta 12689093  T
Q  213 gttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaa 310  Q
    ||||||||||||||||||| ||| |||||||||||||||||  ||||||| |||||||||||||||||||| |||||| |||  ||||||||||||||||    
T  12689092 gttaaccgcacagttgtagctgagcttgttttatcctggagacggcgtggttgatagtctgccttgcacaattttgggcagtatcacaaaacgtcttaaa 12688993  T
Q  311 gagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||| ||  ||||| |||||||||||||||||||||| ||| ||||    
T  12688992 gagagtgacctggtcatgactcaacctagtaacaacttcggtggata 12688946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 11570521 - 11570869
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| ||||||| || |||| || || ||| ||||| ||||||| || |||||| ||||||||||| ||||||||||||||||||||| | |||||||||    
T  11570521 atcaccatatttaagtggtcgtaatgacatattgatgttttggagaaattaaagttagaatggtggcaacaccatatttgagtggtcttaacaccataac 11570620  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||| | ||    
T  11570621 agagtggttacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtataattctggaacggttttctacagcggag 11570720  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||| ||||||| |||| ||||||||||||||| |||||| |||||||| ||||||||||    
T  11570721 tagttcaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtctta 11570820  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||| ||||||||||||||||||||||| ||||||||    
T  11570821 aagagagcgacctggttgtgactcaacctagtaacaacttcggtagata 11570869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 312
Target Start/End: Original strand, 17964331 - 17964634
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  17964331 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtgttaacaccatatttgagtggtctcagcaccataac 17964430  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  17964431 agagtggtaacaatttcatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgaaggtgtaattctcgaacggttttctacagtgcag 17964530  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||||||||| || ||  |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  17964531 tagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtctta 17964630  T
Q  309 aaga 312  Q
    ||||    
T  17964631 aaga 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 2699879 - 2700226
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||  |||| ||||| ||| |||||||||| ||||| |||||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  2699879 atcaccatatttgaatggtcgtagtgtcatattgatattttagaaaaattaaagttagaatggtggcaacaccgtatttgagtggtctcagcaccataac 2699978  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||| ||||| ||| |||||||||||||||    
T  2699979 atagtggtaacaataccatattaaagtggtttcagtattaaagagtgatcttagtaccatatttggaggtgtaattctcg-acgattttctacagtgcag 2700077  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || |||||||||| ||  |||||||||||||||| | ||||||| |||||||||| ||||||||| ||||   |||||||| ||||||||||    
T  2700078 tagttaatcgaacagttgtagttgggcttgttttatcctggaagcggcgtggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtctta 2700177  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  2700178 aagagagcgatctggtcgtgactcaacctagtaacaacttcggtagata 2700226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 363
Target Start/End: Original strand, 29892039 - 29892387
Alignment:
Q  17 atatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtg 116  Q
    ||||||||| |||| |||| |||| |||||| |||||| || |||||  ||||||||||||||||||||||||||||| ||| || ||||||||| ||||    
T  29892039 atatttgagtggtcgtagtaccatattgatagtttggagaaattaaatttagaatggtggtaacaccatatttgagtgctcttagtaccataacagagtg 29892138  T
Q  117 gcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagtta 216  Q
    | |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||    
T  29892139 gtaacaataccatattaaagcgatttcagtattaaagagtgatcttagtaccatatttgagggtgtaaatatcgaaaggttttctacaatgcaatagtta 29892238  T
Q  217 accgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagaga 314  Q
    ||| ||||||||||| || ||||||||||||||||||| || |||| ||||||| || ||||||||| |||||| |||||||| |||| |||||||||||    
T  29892239 accacacagttgtagctggacttgttttatcctggaggaggtgtggttgatagtttgtcttgcacaattttgggcagtgccaccaaacttcttaaagaga 29892338  T
Q  315 gcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttt 363  Q
    ||||  ||  |||||||||||||||||||||||| | ||||||||||||    
T  29892339 gcgacctgaccgtgactcaacctagtaacaacttcgatagatattcttt 29892387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 11 - 363
Target Start/End: Original strand, 12406125 - 12406479
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| |||||| |||||| || |||||| || ||| ||||||||| |||||||||||||| |||||||||||||    
T  12406125 atcaccatatttgagtggtcgtagtaccatattgatagtttggagaaattaaagttaaaatagtggtaacatcatatttgagtggtatcagcaccataac 12406224  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||| |||| | |||||| ||||||||||||| ||||||||  |||||||||||| ||||||    
T  12406225 agagtggtaacaataccatattaaagtggtttcagtattaaaaagtgattttagtatcatatttgagggtataaatctctcacggttttctacggtgcag 12406324  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg-gtgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||| ||||||||||| ||| | ||||||||| || ||| ||||||  ||||||||| |||||||||| ||| || | |||||| |||||||||     
T  12406325 tagttaaccacacagttgtagttgagcatgttttatcatgaaggcggcgtgattgatagtcttccttgcacaactttaggcactgccacgaaacgtcttt 12406424  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttt 363  Q
    ||||||||||  |||||||||||||| ||||||||||||| |||| |||||||||    
T  12406425 aagagagcgacctggtcgtgactcaatctagtaacaacttcggtatatattcttt 12406479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 66 - 357
Target Start/End: Original strand, 33687430 - 33687723
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||| |||||  |||||| |||||||||||||||||| |||||||||||||| |||||    
T  33687430 tagaatggtggtaacatcatatttgagtggtctcggcaccataacagagtggtgacaatatcatattaaagtggtttcaatattaaagagtggttttagt 33687529  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||  ||||||||||||||||  ||| ||| ||    
T  33687530 accatatttgagggtgtaaatctcgaaggattttctacaatgcagtagttaaccgcacagttgtagttgagtttgttttatcctggagacggcatggttg 33687629  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||| ||||||||| |||||  |||||||| ||||||||||||||||||||  |||| || |||||||||| |||||| || ||||||||    
T  33687630 atagtctgtcttgcacaattttggccagtgccacgaaacgtcttaaagagagcgacctggtggtaactcaacctaataacaatttcggtagata 33687723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 27 - 263
Target Start/End: Original strand, 11534499 - 11534735
Alignment:
Q  27 ggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaatac 126  Q
    |||||||||||||| ||||| ||||||| ||  ||||| ||||||||||| ||||||||||||||||||||||| |||||||||| |||||  |||||||    
T  11534499 ggtcatagtgccatattgatgttttggagaaactaaagttagaatggtggcaacaccatatttgagtggtctcaacaccataacagagtggttacaatac 11534598  T
Q  127 catattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagt 226  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||| ||||||||||    
T  11534599 catattaaagtggtttcaatattaaagagtggtcttagtaccatatttgagggtgtaattctggaacggttttctacaatgcagtagttcaccgcacagt 11534698  T
Q  227 tgtagatgaacttgttttatcctggaggtggcgtggt 263  Q
    ||||| ||| |||||||||||||||||| ||||||||    
T  11534699 tgtagttgagcttgttttatcctggaggcggcgtggt 11534735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 11 - 312
Target Start/End: Original strand, 16835932 - 16836231
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| || || ||||||| || |||||| ||||||||||| ||||||||||||||||||||||| |||||||||    
T  16835932 atcaccatatttgagtggtcgtagtgccatattaatgttttggagaagttaaagttagaatggtggcaacaccatatttgagtggtctcaacaccataac 16836031  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    |  ||||  |||||||||||     |||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  16836032 agtgtggttacaataccatag----gtggtttcagtattaaagagtggtcttagtaccaaatatgagggtgtaattctcgaacggttttctacagtgcag 16836127  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||  ||||||||||||||||| ||  |||||||||||||||||| ||||||| ||||||||||||||| |||| |||||| |||||||| ||||||||||    
T  16836128 taactaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtctta 16836227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 27 - 263
Target Start/End: Original strand, 11560009 - 11560245
Alignment:
Q  27 ggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaatac 126  Q
    |||| ||||||||| ||||| ||||||| ||  ||||| ||||||||||  ||||||||||||||||||||||| |||||||||| |||||  |||||||    
T  11560009 ggtcgtagtgccatattgatgttttggagaaactaaagttagaatggtgacaacaccatatttgagtggtctcaacaccataacagagtggttacaatac 11560108  T
Q  127 catattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagt 226  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||| ||||||||||    
T  11560109 catattaaagtggtttcaatattaaagagtggtcttagtaccatatttgagggtgtaattctggaacggttttctacaatgcagtagttcaccgcacagt 11560208  T
Q  227 tgtagatgaacttgttttatcctggaggtggcgtggt 263  Q
    ||||| ||| |||||||||||||||||| ||||||||    
T  11560209 tgtagttgagcttgttttatcctggaggcggcgtggt 11560245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 11428332 - 11428124
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||| ||||||| || | |||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  11428332 atcaccatatttgagtggtcgtagtgccatattgatgttttggagaaatgaaagttagaatggtggtaacaccatatttgagtggtctcaacaccataac 11428233  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11428232 agagtggtaacaataccatattaaagtggtttcagtattaaagagtagtcttagtaccatatttgatggtgtaaatctcgaacggttttctacagtgcag 11428133  T
Q  211 tagttaacc 219  Q
    || ||||||    
T  11428132 tacttaacc 11428124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 11 - 274
Target Start/End: Original strand, 19995175 - 19995439
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||| ||||||||||||| ||||||||| ||||||| |||||||||| || ||||| |||||||  ||||||||    
T  19995175 atcaccatatttgagtggtcgtagtaccatattgatattttggagaacttaaagttagaatgatggtaacaccgtagttgaggggtctcataaccataac 19995274  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||||||||||||||||||| |||||||||| ||| ||    
T  19995275 aaagtggtaacaataccatattaaagtggtttcagtattaaatagtgtttttagtacgatatttgagggtgtaaatctcgaaaggttttctacggtgtag 19995374  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgcc 274  Q
    |||||||||||| |||||||| ||  |||||||||||| | ||||| ||||| ||||||||||||    
T  19995375 tagttaaccgcatagttgtagctgggcttgttttatcccgaaggtgccgtggttgatagtctgcc 19995439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 66 - 348
Target Start/End: Complemental strand, 8748045 - 8747766
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    |||||||||||||||||||||||||| |||||||| ||||||||   |||||  |||||||||||||     |||||||||| |||| ||||||||||||    
T  8748045 tagaatggtggtaacaccatatttgaatggtctcaacaccataattgagtggttacaataccatatt-----ggtttcagtaataaaagagtggtcttag 8747951  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcg-tggt 263  Q
    ||||||||| || ||||||| | |||||||||||||||||||||||||||||||| || ||||| || ||| |||||||||||||||||| |||| || |    
T  8747950 taccatatt-gaaggtgtaattttcgaacggttttctacagtgcagtagttaaccacatagttgcagctgagcttgttttatcctggaggcggcgttgtt 8747852  T
Q  264 gatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    ||||| ||| ||||||||| |||||| |||| |||  |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  8747851 gatagcctgtcttgcacaattttgggcagtgtcacggaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 8747766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 4157141 - 4157384
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||  ||||  ||| ||||| ||||||| || |||||| | |||||||||| ||||||||||||||||||||||||||||||||    
T  4157141 atcaccatatttgagtggtggtagtatcatattgatgttttggagaaattaaagtttgaatggtggtgacaccatatttgagtggtctcagcaccataac 4157240  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | || || ||||||| |||||||||||| |||||||||||||||||| | |||| ||||||||| ||||||||||| ||||||| |||||||||||||||    
T  4157241 agagcggtaacaataacatattaaagtgatttcagtattaaagagtgatattagcaccatatttaagggtgtaaatttcgaacgattttctacagtgcag 4157340  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggagg 254  Q
    ||||||||||||| ||||||| |||  |||||||||||| ||||    
T  4157341 tagttaaccgcaccgttgtagctgagtttgttttatcctagagg 4157384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 73 - 357
Target Start/End: Complemental strand, 14509245 - 14508959
Alignment:
Q  73 gtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtcttagtaccata 171  Q
    |||||||||||||||||||||||||||| |||||||| | ||||  |||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  14509245 gtggtaacaccatatttgagtggtctcaacaccataatagagtgataacagtaccatattaaagtggtttcagtattaaaagaatggtcttggtaccata 14509146  T
Q  172 tttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtc 270  Q
    || || ||||||| ||||||||| ||||||||| |||||||||||| || |||||||||||||| ||||||||||| |||| | ||||||| ||||| ||    
T  14509145 ttgga-ggtgtaattctcgaacgattttctacaatgcagtagttaatcgaacagttgtagatgagcttgttttatcttggaagcggcgtggttgataatc 14509047  T
Q  271 tgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    || ||||||||| ||||   |||| ||| ||||||||| |||||||||| ||| || | | ||| |||| ||||||||||||||||||    
T  14509046 tgtcttgcacaattttgaacagtgacacgaaacgtcttgaagagagcgacatgatcataaatcatcctaataacaactttggtagata 14508959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 25314229 - 25314393
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||| ||||||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  25314229 atcaccatatttgagtggtcgtagtgccatattgatgttttggagaaattaaagttagaatggtggtaacaccatatttgagtggtctcaacaccataac 25314328  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttg 175  Q
    | ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25314329 agagtggtaacaataccatattaaagtgatttcagtattaaagagtggtcttagtaccatatttg 25314393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 26201723 - 26201887
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||| ||||||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  26201723 atcaccatatttgagtggtcgtagtgccatattgatgttttggagaaattaaagttagaatggtggtaacaccatatttgagtggtctcaacaccataac 26201822  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttg 175  Q
    | ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26201823 agagtggtaacaataccatattaaagtgatttcagtattaaagagtggtcttagtaccatatttg 26201887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 92 - 361
Target Start/End: Original strand, 24589022 - 24589288
Alignment:
Q  92 gtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttagtaccatatttgagggtgtaaatctcg 190  Q
    ||||||||| |||||||| | |||||  ||| |||||||||     ||||||||||||||| ||||||||||||||||||||| || ||||||| |||||    
T  24589022 gtggtctcaacaccataatagagtggttacattaccatatt-----ggtttcagtattaaaagagtggtcttagtaccatatt-gaaggtgtaattctcg 24589115  T
Q  191 aacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttggg 288  Q
    |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||  ||||||| |||||||||  ||||||||| |||||     
T  24589116 aacggttttctacaatgcagtagttaaccgcacagttgtagttggacttgttttatcctggagacggcgtggttgatagtctatcttgcacaattttgga 24589215  T
Q  289 tagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattct 361  Q
     |||| ||| |||||| |||||||||||||  || |||||||||||| |||||||||||| | ||||| ||||    
T  24589216 aagtgtcacgaaacgttttaaagagagcgatctgatcgtgactcaacttagtaacaacttcgatagatgttct 24589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 124 - 359
Target Start/End: Original strand, 20748169 - 20748406
Alignment:
Q  124 taccatattaaagtggtttcagtattaaa-gagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgca 222  Q
    |||||||||  ||| |||| ||||||||| ||||||| |||||||||||||| ||| ||||| |||||||| ||||||||| ||||||||||||||||||    
T  20748169 taccatattggagtagttttagtattaaaagagtggttttagtaccatatttaagg-tgtaattctcgaaccgttttctacggtgcagtagttaaccgca 20748267  T
Q  223 cagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaa 320  Q
    |||||||||||| ||||||||||| ||||||| ||||||| |||||||| ||||||||||| |||||  ||| |||  |||| | |||||||| ||||      
T  20748268 cagttgtagatggacttgttttattctggaggcggcgtggttgatagtcggccttgcacaattttggacagtaccatgaaacatgttaaagagggcgacc 20748367  T
Q  321 tggtcgtgactcaacctagtaacaactttggtagatatt 359  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  20748368 tggtcgtgactcaacctagtaacaactttgatagatatt 20748406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 107 - 357
Target Start/End: Complemental strand, 21309241 - 21309006
Alignment:
Q  107 taacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagt 206  Q
    ||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||                 ||    
T  21309241 taacagagtggtaacaataccatattaatgtgatttcagtattaaagagtggtcttagtaccgtatttgaaggtataaatc-----------------gt 21309159  T
Q  207 gcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaattt-gggtagtgccacaaaacgt 304  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||| |||||||||| ||||||||||| ||| |||||||  ||||||    
T  21309158 gcagtagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgcattgcacaattttgggcagtgccatgaaacgt 21309059  T
Q  305 cttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| | ||||||    
T  21309058 cttaaagagagcgatatggtagtgactcaacctagtaacaacttcgatagata 21309006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 5856330 - 5856155
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| || |||||| |||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| | ||||||||     
T  5856330 atcaccatatttgagtggtcgtaatgccatattgatactttggaaaaattaaagttagaatggtggtaacaccatatttgagtggtcttaacaccataat 5856231  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatc 187  Q
    | ||||| |||||||||||||| ||||||||||||||||| |||||| | ||| |||||||||||| ||||||||||    
T  5856230 agagtggtaacaataccatatt-aagtggtttcagtattatagagtgattttactaccatatttgaaggtgtaaatc 5856155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 169 - 357
Target Start/End: Original strand, 25316494 - 25316686
Alignment:
Q  169 atatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctgga---ggtggcgtgg-tg 264  Q
    ||||||||||||| || |||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||   || ||||||| |     
T  25316494 atatttgagggtgcaattctcgaacagttttctacagtgca-tagttaaccgcacggttgtagatgaacttgttttatcctggagacggcggcgtggttc 25316592  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||| ||| |||||||| |||||| |||||||||||||||||||||  ||||||  |||||| ||||||| |||||||||| || ||||||||    
T  25316593 atagtttgctttgcacaattttgggcagtgccacaaaacgtcttaaattgagcgacctggtcgcgactcaatctagtaacaatttcggtagata 25316686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 169 - 357
Target Start/End: Original strand, 26203988 - 26204180
Alignment:
Q  169 atatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctgga---ggtggcgtgg-tg 264  Q
    ||||||||||||| || |||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||   || ||||||| |     
T  26203988 atatttgagggtgcaattctcgaacagttttctacagtgca-tagttaaccgcacggttgtagatgaacttgttttatcctggagacggcggcgtggttc 26204086  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||| ||| |||||||| |||||| |||||||||||||||||||||  ||||||  |||||| ||||||| |||||||||| || ||||||||    
T  26204087 atagtttgctttgcacaattttgggcagtgccacaaaacgtcttaaattgagcgacctggtcgcgactcaatctagtaacaatttcggtagata 26204180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 178 - 366
Target Start/End: Original strand, 13736617 - 13736807
Alignment:
Q  178 ggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgcctt 276  Q
    |||||||||||||||| ||||||||||||||||||||||  |||||| |||||||||  ||||||||||||||||||  | |||| || |||||| ||||    
T  13736617 ggtgtaaatctcgaacagttttctacagtgcagtagttattcgcacatttgtagatgtgcttgttttatcctggaggcagtgtggttggtagtcttcctt 13736716  T
Q  277 gcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttc 366  Q
    |||||| ||| || |||||||| ||||||| ||||||||| ||  |||| | ||||||||||||||||||||| |||| ||||||||||||    
T  13736717 gcacaattttaggcagtgccacgaaacgtcgtaaagagagggacctggtggcgactcaacctagtaacaacttcggtaaatattctttttc 13736807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 11613568 - 11613705
Alignment:
Q  42 ttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaatacc--atattaaagtgg 139  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||| |||||||||| | ||||| || ||||||  ||||||||||||    
T  11613568 ttgatattttggagaactcaaagttagaatggtggtaacaccatatttgagaggtcttagcaccataatagagtggtaataataccatatattaaagtgg 11613667  T
Q  140 tttcagtattaaagagtggtcttagtaccatatttgag 177  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  11613668 tttcagtattaaatagtgatcttagtaccatatttgag 11613705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 182 - 366
Target Start/End: Original strand, 11614035 - 11614221
Alignment:
Q  182 taaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcac 280  Q
    |||||||| ||| |||||||| |||||| |||||||||||||| |||||  ||  |||||||||||||||||| ||||||| ||||||||||||||||||    
T  11614035 taaatctcaaacagttttctaaagtgcattagttaaccgcacaattgtaattgtgcttgttttatcctggaggcggcgtggttgatagtctgccttgcac 11614134  T
Q  281 aa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttc 366  Q
    || |||| | ||||||| ||||||| ||||||||| | |  |  ||||||||||||||||||||||||| | |||||||||||||||    
T  11614135 aattttgagcagtgccataaaacgttttaaagagaacaacctcatcgtgactcaacctagtaacaacttcgatagatattctttttc 11614221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 66 - 261
Target Start/End: Complemental strand, 22609837 - 22609641
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatta--aagagtggtctta 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || |  |||| ||||||| |||||||||| |  ||||  |||||||||| ||    
T  22609837 tagaatggtggtaacaccatatttgagtggtctcagcaccataataatgttggcacaacaccatatcaaagtggtttaaaaattaataagagtggtcata 22609738  T
Q  164 gtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg 261  Q
     ||||||||| || ||||||| |||||||  ||||||||| ||||||| ||||| | | ||||||||| ||| |||||||||||||||||| ||||||    
T  22609737 ttaccatattgga-ggtgtaattctcgaatagttttctaccgtgcagttgttaatcacgcagttgtagttgagcttgttttatcctggaggcggcgtg 22609641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 154 - 356
Target Start/End: Original strand, 9751724 - 9751928
Alignment:
Q  154 agtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggag 253  Q
    |||||||||||| ||||||| |||| ||||| ||||||| ||| |||||||||||||||||||| |||||| |||||| |  |||| |||||||||  ||    
T  9751724 agtggtcttagtgccatattggagg-tgtaattctcgaatggtgttctacagtgcagtagttaatcgcacaattgtagttagacttattttatcctacag 9751822  T
Q  254 gtggcgtggt-gatagtctgccttgcacaattt---gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaacttt 349  Q
      | |||| | ||||||   |||||||||||||   |||||||||||||||| ||||||||||||||| | |  ||||||||||||||||| ||||||||    
T  9751823 acgacgtgattgatagttccccttgcacaattttttgggtagtgccacaaaatgtcttaaagagagcg-actattcgtgactcaacctagtgacaacttt 9751921  T
Q  350 ggtagat 356  Q
    |||||||    
T  9751922 ggtagat 9751928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 17913881 - 17913768
Alignment:
Q  50 ttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtatt 149  Q
    ||||| ||||||||| |||||||||  |||||| |||||| |||||||||| |||||||||| ||||| ||||||||  ||||||||| |||||||||||    
T  17913881 ttggagaacttaaagttagaatggtaataacactatatttaagtggtctcaacaccataacagagtggtaacaatactgtattaaagtagtttcagtatt 17913782  T
Q  150 aaagagtggtctta 163  Q
    ||||||||||||||    
T  17913781 aaagagtggtctta 17913768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 61 - 263
Target Start/End: Original strand, 15991560 - 15991764
Alignment:
Q  61 aaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggt 159  Q
    |||| |||| ||||||||||||||||||||| |||||  |  ||||||  | |||||  | | ||||||| |  | |||||||||| ||||| ||||||     
T  15991560 aaagttagagtggtggtaacaccatatttgaatggtcataataccatagtagagtggtcatagtaccataattgattggtttcagttttaaaagagtggc 15991659  T
Q  160 cttagtacc-atatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggc 258  Q
     ||| |||| ||||||||  |||||| |||| |||||||||| ||||||||||||||||| ||||| ||| || ||||||||||||||||| |||| |||    
T  15991660 attaatacccatatttgattgtgtaattctcaaacggttttcgacagtgcagtagttaactgcacaattgcagctgaacttgttttatcctagaggcggc 15991759  T
Q  259 gtggt 263  Q
     ||||    
T  15991760 ttggt 15991764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 61 - 263
Target Start/End: Original strand, 15999222 - 15999426
Alignment:
Q  61 aaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggt 159  Q
    |||| |||| ||||||||||||||||||||| |||||  |  ||||||  | |||||  | | ||||||| |  | |||||||||| ||||| ||||||     
T  15999222 aaagttagagtggtggtaacaccatatttgaatggtcataataccatagtagagtggtcatagtaccataattgattggtttcagttttaaaagagtggc 15999321  T
Q  160 cttagtacc-atatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggc 258  Q
     ||| |||| ||||||||  |||||| |||| |||||||||| ||||||||||||||||| ||||| ||| || ||||||||||||||||| |||| |||    
T  15999322 attaatacccatatttgattgtgtaattctcaaacggttttcgacagtgcagtagttaactgcacaattgcagctgaacttgttttatcctagaggcggc 15999421  T
Q  259 gtggt 263  Q
     ||||    
T  15999422 ttggt 15999426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 263 - 353
Target Start/End: Complemental strand, 19674383 - 19674292
Alignment:
Q  263 tgatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggta 353  Q
    |||||||||| |||||||||||| ||| |||||||  ||||||||||||||||| ||  |||||||||||||||||||||||||||| ||||    
T  19674383 tgatagtctgtcttgcacaattttgggcagtgccatgaaacgtcttaaagagagtgacctggtcgtgactcaacctagtaacaacttcggta 19674292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 19478243 - 19478145
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||| |||||  |||||||| | |||||| |||||||||| |||||||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  19478243 tgttttatcgtggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19478145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 22695226 - 22695380
Alignment:
Q  194 ggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtg-gtgatagtctgccttgcacaa-tttgggtag 291  Q
    ||||||||||| |||||| ||||||||||||||||||| || |||||||||||| |||||| || |||  |||| || || ||||||||| |||| | |     
T  22695226 ggttttctacaatgcagtggttaaccgcacagttgtagctgtacttgttttatcgtggaggcggtgtgattgattgtatgtcttgcacaattttgagcaa 22695325  T
Q  292 tgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaac 346  Q
    || ||| |||||| ||||||||||| | ||  ||||| |||||||||||||||||    
T  22695326 tgtcacgaaacgtgttaaagagagcaacataatcgtgtctcaacctagtaacaac 22695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 269 - 353
Target Start/End: Complemental strand, 11428108 - 11428022
Alignment:
Q  269 tctgccttgcacaa--tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggta 353  Q
    ||||||||||||||  |||||| |||||||| ||||||||||||||||||||  |||||||||||||| ||| ||||||||| ||||    
T  11428108 tctgccttgcacaacttttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaatctaataacaacttcggta 11428022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 13605092 - 13605190
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| |||||||||||| | |||||||||||||||||| |  | ||||||||||||||    
T  13605092 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctagtcgtgactcaacc 13605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 21396794 - 21396699
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    ||||||||||||||| ||||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  21396794 tgttttatcctggagatggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21396699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 22698243 - 22698338
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  22698243 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 22698338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 31981655 - 31981560
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||| ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  31981655 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 31981560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 34142175 - 34142080
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| |||||||| ||||| |||||||||||||| |||||  |||||||||||||    
T  34142175 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgggtagagccacgaaacgtcttaaagaaagcgacctggtcgtgactca 34142080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 34154791 - 34154696
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| |||||||| ||||| |||||||||||||| |||||  |||||||||||||    
T  34154791 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgggtagagccacgaaacgtcttaaagaaagcgacctggtcgtgactca 34154696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 2882821 - 2882866
Alignment:
Q  303 gtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  2882821 gtcttaaagagagcgatatggtcgtgactcaacctagtaacaactt 2882866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 3902006 - 3901909
Alignment:
Q  241 ttttatcctggaggtggcgtggt-gatagtctgccttgcacaat-ttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||| |||| ||| | || ||| ||||||||||  |||| ||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 3901909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 29491237 - 29491332
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  29491237 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacttggtcgtgactca 29491332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 299 - 357
Target Start/End: Original strand, 11534740 - 11534798
Alignment:
Q  299 aaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||||||  |||||||    
T  11534740 aaacgtcttaaagagagcgacctggtcttgactcaacctagtaacaacttcagtagata 11534798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 299 - 357
Target Start/End: Original strand, 11560250 - 11560308
Alignment:
Q  299 aaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||||||  |||||||    
T  11560250 aaacgtcttaaagagagcgacctggtcttgactcaacctagtaacaacttcagtagata 11560308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 337
Target Start/End: Original strand, 12183047 - 12183100
Alignment:
Q  284 ttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacct 337  Q
    |||||||||||| | ||||||||||||||||||||  |||||||||||||||||    
T  12183047 ttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacct 12183100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 361
Target Start/End: Original strand, 2760233 - 2760366
Alignment:
Q  217 accgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagag 315  Q
    |||||| |||||||  ||| ||||||||||||||||||   |||||| |||||||||||||||| |||         |||||||||||| |||||||||     
T  2760233 accgcaaagttgtatttgagcttgttttatcctggagg---cgtggttgatagtctgccttgcataat---------gccacaaaacgttttaaagagaa 2760320  T
Q  316 cgaaatggtcgtgactcaacctagtaacaactttggtagatattct 361  Q
    |||  ||||||| ||| |||||||||||||||| | ||| ||||||    
T  2760321 cgacctggtcgtaacttaacctagtaacaacttcgctagttattct 2760366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 10642805 - 10642706
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttggg-tagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||| ||||| |||| ||| | |||||| ||||||||||  | || ||||||||| |||||||||||||| ||||| || ||||||||||||||    
T  10642805 tgttttatccgggaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaagaaagcgacattgtcgtgactcaacc 10642706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 24191383 - 24191478
Alignment:
Q  239 tgttttatcctggaggtggcgtggtga-tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| |  ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  24191383 tgttttatcctggagacggcgcggttactagtctaccttgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 24191478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 24192480 - 24192575
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| |  ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  24192480 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 24192575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 22695095 - 22695185
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcag 101  Q
    |||| |||||||||| |||  ||||  ||| |||||| |||||| ||||||||| |||||||||||| ||||||||||  |||||| ||||    
T  22695095 atcaccatatttgagtggttgtagtatcatgttgatagtttggagaacttaaagttagaatggtggtgacaccatattaaagtggtttcag 22695185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 2863518 - 2863563
Alignment:
Q  303 gtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||    
T  2863518 gtcttaaagagagcgacatgatagtgactcaacctagtaacaactt 2863563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 6112788 - 6112898
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||| |||||||||||||||||||||| | || ||||| | ||||| ||||     |||||| | |||||||| ||||||| | | ||||||||    
T  6112788 tagaatggtgataacaccatatttgagtggtcttaaca-cataatagagtggtaaca-----atattatattggtttcaatattaaaaattagtcttagt 6112881  T
Q  166 accatatttgagggtgt 182  Q
    ||||||||  |||||||    
T  6112882 accatattaaagggtgt 6112898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 6407985 - 6408029
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  6407985 aatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 6408029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 19995439 - 19995471
Alignment:
Q  325 cgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||||||||||||||||||||||||    
T  19995439 cgtgactcaacctagtaacaactttggtagata 19995471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 21401822 - 21401755
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| |||| ||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  21401822 tagtctaccttccacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21401755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 22703366 - 22703461
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| | ||| ||  ||||||||||    
T  22703366 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacataatcgtgactca 22703461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 17281612 - 17281662
Alignment:
Q  286 gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||| | |||||||||||||| ||||| ||| |||||||||||||    
T  17281612 gggtagtgccgcgaaacgtcttaaagaaagcgacatgctcgtgactcaacc 17281662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 17729136 - 17729086
Alignment:
Q  303 gtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggta 353  Q
    |||||||||||||||| |   ||||| ||||||||||||||||||||||||    
T  17729136 gtcttaaagagagcgacaatatcgtgtctcaacctagtaacaactttggta 17729086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 22695165 - 22695199
Alignment:
Q  125 accatattaaagtggtttcagtattaaagagtggt 159  Q
    |||||||||||||||||||||| ||||||||||||    
T  22695165 accatattaaagtggtttcagttttaaagagtggt 22695199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 318
Target Start/End: Complemental strand, 35129739 - 35129643
Alignment:
Q  222 acagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcga 318  Q
    |||||||||| || ||| |||||||||||  | || |||||| |||||||||| ||||||||||| ||| |||||||  ||||||||||||||||||||    
T  35129739 acagttgtagctggact-gttttatcctgatgatgtcgtggttgatagtctgc-ttgcacaattttgggcagtgccatgaaacgtcttaaagagagcga 35129643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 417
Target Start/End: Original strand, 17964655 - 17964696
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaaca 417  Q
    |||||||||| |||||||||||||||||| ||||||||||||    
T  17964655 aatttggaaatccaaatacaacagtttggaaatccaaaaaca 17964696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 2863288 - 2863324
Alignment:
Q  61 aaagctagaatggtggtaacaccatatttgagtggtc 97  Q
    |||| |||||||||||||||| |||||||||||||||    
T  2863288 aaagttagaatggtggtaacatcatatttgagtggtc 2863324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 2882592 - 2882628
Alignment:
Q  61 aaagctagaatggtggtaacaccatatttgagtggtc 97  Q
    |||| |||||||||||||||| |||||||||||||||    
T  2882592 aaagttagaatggtggtaacatcatatttgagtggtc 2882628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 8747752 - 8747708
Alignment:
Q  377 aatttggaaagccaaatacaacagtttg-gaatccaaaaacaaca 420  Q
    |||||||||| |||||||||||||||||  |||||||||||||||    
T  8747752 aatttggaaatccaaatacaacagtttgtaaatccaaaaacaaca 8747708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 239 - 313
Target Start/End: Original strand, 32815063 - 32815138
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagag 313  Q
    |||||||| |||| |||| |||||| |||||||||| ||||||||||| ||| |||||| | |||||||||||||||    
T  32815063 tgttttatactgggggtgtcgtggttgatagtctgc-ttgcacaattttgggcagtgccgcgaaacgtcttaaagag 32815138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 213; Significance: 1e-116; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 1934765 - 1935113
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| ||||| |||| | || |||| |||| |||||| |||||| ||||||||| |||||||||   |||||||||||||||||||||||| ||| ||||    
T  1934765 atcaccatatatgagtgatcgtagtaccatattgatagtttggagaacttaaagttagaatggtatgaacaccatatttgagtggtctcagaaccttaac 1934864  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  1934865 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcat 1934964  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||||||||| || ||  |||||||||||||||||| ||||||| |||||||||| ||||||||| |||||| |||||||| ||||||||||    
T  1934965 tagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctta 1935064  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  1935065 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 1935113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 25497098 - 25497445
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||| ||||||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  25497098 atcaccatatttgaggggtcgtagtgccatattgatgttttggagaaattaaagttagaatggtggtaacaccatatttgagtggtctcaacaccataac 25497197  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||     
T  25497198 agagtggtaataataccatattaaagtggtttcaatattaaagagtggtcttagtatcatatttgagggtgtaattctcgaacggttttctacagtgca- 25497296  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcac-aatttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||||||||||| ||  |||||||||||||||||| ||||||| |||||||||| ||||||| |||||||| ||||  || ||||||||||    
T  25497297 tagttaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtctta 25497396  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  ||||||||||||||||||||||||| || ||||||||    
T  25497397 aagagagcgacctggtcgtgactcaacctagtaacaatttcggtagata 25497445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 11 - 474
Target Start/End: Original strand, 9180500 - 9180947
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||||| || ||||| ||||||| || |||||| ||||||||||| ||||||||||||||||||||||| |||||||||    
T  9180500 atcaccatatttgagtggtcgtagtgctatattgatgttttggagaaattaaagttagaatggtggcaacaccatatttgagtggtctcaacaccataac 9180599  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | |||||  |||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9180600 agagtggttacaataccatag----gtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacgattttctacagtgcag 9180695  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| |  |||||||||| ||  |||||||||||||||||| ||||||| |||||||||||||||||||| |||||  |||||||| ||||||||||    
T  9180696 tagttaatcaaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtctta 9180795  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aa 407  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||||| |                 |||||| ||| |||||||||||||||||| ||    
T  9180796 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataat---------------agaatttgaaaatccaaatacaacagtttggaaa 9180880  T
Q  408 tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagatt 474  Q
    | ||||||||||| ||||||||| |||| ||||||||||||||| |||||| |||||| ||||||||    
T  9180881 ttcaaaaacaacaattttaagacgtttctatctgctatgtctaccgaagaagttacttgttgagatt 9180947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 16 - 585
Target Start/End: Original strand, 25478075 - 25478627
Alignment:
Q  16 catatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagt 115  Q
    |||||||||| |||| ||||||||| ||||| ||||||| || |||||| |||||||||||||||| ||||||||||| |||||| |||||||||| |||    
T  25478075 catatttgagtggtcgtagtgccatattgatgttttggagaaattaaagttagaatggtggtaacatcatatttgagtagtctcaacaccataacagagt 25478174  T
Q  116 ggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagtt 215  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||| |||||    
T  25478175 ggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtactatatttgagggtgtaattcttgaacggttttctacagtgca-tagtt 25478273  T
Q  216 aaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagag 313  Q
    |  ||||||||||||| ||  |||||||||| ||||||| ||||||| |||||||||||||||||||| |||||| |||| ||| |||||||||||||||    
T  25478274 attcgcacagttgtagctgggcttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagag 25478373  T
Q  314 agcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttg-gaatccaa 412  Q
    |||||  |||| ||||||||||||||||||||||| |||||||| |               | |||||||||| |||||||||| ||||||  |||||||    
T  25478374 agcgacctggttgtgactcaacctagtaacaacttcggtagataat-----------agaatgaatttggaaatccaaatacaatagtttgaaaatccaa 25478462  T
Q  413 aaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattgagattttgttgtaccaaaattaaaacaaggataaatcaggcta 512  Q
    |||||||| ||||||||| ||||  | || ||||||||| |      ||||||||| || ||  ||||| || ||| || || |||||||||||| ||||    
T  25478463 aaacaacaattttaagacgtttctttatgttatgtctaccg------ttacttattaagtttgagttgttcctaaa-tacaagaaggataaatcaagcta 25478555  T
Q  513 taaaaatacatattttggactgatataatgaagtgattgttgttataacaacgacaataagagattcacatat 585  Q
    || | |||||| |||| |||||| |  | |||||| |||||||||||||||| ||| ||||| ||||||||||    
T  25478556 tagatatacatctttt-gactgaaacgaggaagtgtttgttgttataacaacaacactaagaaattcacatat 25478627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 12797248 - 12796900
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||| ||||||| || ||||   ||||||||||| || |||||||||||||||||||| |||||||||    
T  12797248 atcaccatatttgagtggtcgtagtgccatattgatgttttggagaaattaatattagaatggtggcaataccatatttgagtggtctcaacaccataac 12797149  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  12797148 agagtggttacaataccatattaaggtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctacggtgcag 12797049  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    |||||||||||||||||||||  | ||||||||||||||||||  ||||||| |||||||||| |||| |||| |||||| |||||||||||||||||||    
T  12797048 tagttaaccgcacagttgtagccggacttgttttatcctggagacggcgtggttgatagtctgtcttgaacaattttgggcagtgccacaaaacgtctta 12796949  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||| ||||||||| || |||||    
T  12796948 aagagagcgatctggtcgtgactcaacctaataacaacttcggcagata 12796900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 66 - 581
Target Start/End: Complemental strand, 30651196 - 30650695
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| |||| | ||||||||||||||||||||||||||||||||||||||||    
T  30651196 tagaatggtggtaacaccatatttgagtggtctcagcaccatat-agagtggtaacagtgccatattaaagtggtttcagtattaaagagtggtcttagt 30651098  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    ||||||||||  ||||||| ||||||||| |||||||| ||||||||||||| || |||||||||| ||  ||||||||||| |||||| ||||||| ||    
T  30651097 accatatttggaggtgtaattctcgaacgattttctacggtgcagtagttaatcgaacagttgtagctgggcttgttttatcttggaggcggcgtggttg 30650998  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttt 363  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| |        
T  30650997 atagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcggtagataat---- 30650902  T
Q  364 ttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaatta 462  Q
                 |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||| |||||| |||||| |||    
T  30650901 -----------agaatttggaaatccaaatacaacagtttggaaatccaaaaacaacaattttaagacgtttcgatctgctacgtctaccgaagaagtta 30650813  T
Q  463 cttattgagattttgttgtaccaaaattaaaacaaggataaatcaggctataaaaatacatattttggactgatataatgaagtgattgttgttat-aac 561  Q
     |||||||| ||  ||||| ||  ||  | |  |||||||||||| |||||| |||||||| |||| |||||| |  |||||||| |||| ||||| |||    
T  30650812 tttattgaggttaagttgtccctgaa-cacattaaggataaatcaagctatagaaatacatctttt-gactgaaacgatgaagtggttgtagttataaac 30650715  T
Q  562 aacgacaataagagattcac 581  Q
    ||| ||| ||||| ||||||    
T  30650714 aacaacactaagaaattcac 30650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 19892240 - 19892586
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| |||| |||||  |||| |||||| || |||||| |||||||||  |||||||||||||||||||||| |||||||||||    
T  19892240 atcaccatatttgagtggtcgtagtaccatt--gatagtttggagaatttaaagttagaatggtattaacaccatatttgagtggtcttagcaccataac 19892337  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||    
T  19892338 agagtggtaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacagtgcag 19892437  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || |||||||||| ||| |||||||||||||||||| ||||||| ||||||||||  |||||||| |||||  |||||||  ||||||||||    
T  19892438 tagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgtgttgcacaattttggacagtgccaggaaacgtctta 19892537  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  19892538 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 19892586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 9189579 - 9189923
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||||||| ||||| ||||||| || |||||| ||||||||||| ||||||||||||||||||||||| |||||||||    
T  9189579 atcaccatatttgagtggtcgtagtgccatattgatgttttggagaaattaaagttagaatggtggcaacaccatatttgagtggtctcaacaccataac 9189678  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | |||||  |||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9189679 agagtggttacaataccatag----gtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacgattttctacagtgcag 9189774  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| |  |||||||||| ||  |||||||||||||||||| ||||||| |||||||||||||||||||| |||||  |||||||| ||||||||||    
T  9189775 tagttaatcaaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtctta 9189874  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||| |  |||||||||||||||||||||||||||| ||||||||    
T  9189875 aagagagcaacctggtcgtgactcaacctagtaacaacttcggtagata 9189923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 31327072 - 31326714
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcag--------- 101  Q
    |||| |||||||||| |||| ||||||||| ||||| ||||||| || |||||| ||||||||||  |||||||||||||||||||   ||             
T  31327072 atcaccatatttgagtggtcgtagtgccatattgatgttttggagaaattaaagttagaatggtgacaacaccatatttgagtggttgtagaacggtggc 31326973  T
Q  102 --caccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggtttt 199  Q
      |||||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  31326972 aacaccataatagagtggtaacaataccatattaaagtggtttcagtattaaatagtggtcttagtaccatatttgagggtgtaattctcgaacggtttt 31326873  T
Q  200 ctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccac 297  Q
    ||| |||||||||||||| ||||||||||||| ||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| ||     
T  31326872 cta-agtgcagtagttaatcgcacagttgtagttgggcttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgggcagtggcat 31326774  T
Q  298 aaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
     ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  31326773 gaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 31326714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 11 - 420
Target Start/End: Original strand, 40847371 - 40847779
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||  ||| |||||| |||||| ||||||||| ||||||||  |||||| |||||||||||||||||| |||||| ||    
T  40847371 atcaccatatttgagtggtcgtagtatcatcttgatagtttggagaacttaaagttagaatggacgtaacatcatatttgagtggtctcaacaccattac 40847470  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt-accatatttgagggtgtaaatctcgaacggttttctacagtgca 209  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||      |    
T  40847471 aaagtggtaacaatatcatattaaagtggtttcaatattaaagagtggtcttggtaaccatatttgagagtgtaaatctcgaacggttttcta-----ta 40847565  T
Q  210 gtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctt 307  Q
    |||||||||| ||||||||||| || ||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||   ||||||||||||||||||    
T  40847566 gtagttaaccacacagttgtagttggacttgttttatccaggaggtggcgtggttgatagtttgccttgcacaactttgaacagtgccacaaaacgtctt 40847665  T
Q  308 aaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttg-ga 406  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| ||||| ||||||| ||          ||||||||||| |||||||||||||||||  |    
T  40847666 aaagagaacgacatggtcgtgactcaatctagtaacaacttcggtagttattcttatttaaaaaataataatttggaaatccaaatacaacagtttgaaa 40847765  T
Q  407 atccaaaaacaaca 420  Q
    ||| ||||||||||    
T  40847766 atctaaaaacaaca 40847779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 28603626 - 28603273
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    ||||||||||||||| |||| |||| |||| || ||| |||||| ||||||||| |||||||||| ||||||||||||| |||||||||| |||||||||    
T  28603626 atcatcatatttgagtggtcgtagtaccatattaatagtttggagaacttaaagttagaatggtgttaacaccatatttaagtggtctcatcaccataac 28603527  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||| ||| |||||||||| ||||||||||    
T  28603526 agagtggtaacaataccatattaaagtggtttcaatattaaaaagtggtcttagtaccatatttggaggtgtaattcttgaacggttttttacagtgcag 28603427  T
Q  211 tagttaaccgcacagttgtagatgaacttgtttt-atcctggaggtgg----cgtggt-gatagtctgccttgcacaatttgggt-agtgccacaaaacg 303  Q
    ||||||| || |||||||||| |||||||||||| ||||||||||| |    |||||| ||||||||| |||||||||||| ||  |||| ||| |||||    
T  28603426 tagttaatcgaacagttgtagctgaacttgtttttatcctggaggtaggtagcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacg 28603327  T
Q  304 tcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    | |||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  28603326 ttttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 28603273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 29678035 - 29677742
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  29678035 tagaatggtggtaacaccatatttgagtggtctcagcaccataatagagtggtaacagtaccatattaaagtggtatcaatattaaagagtggtcttagt 29677936  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  ||| |||||||||| ||| ||| ||| ||    
T  29677935 accatatttgtgggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctgggctttttttatcctgtaggcggcttggttg 29677836  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||| |||||||||||| ||| || |||||||| ||| ||||||| ||||||||  |||||||||||||||||||||||||||| | ||||||    
T  29677835 atagtttgccttgcacaatttttggcagtgccactaaatgtcttaatgagagcgacctggtcgtgactcaacctagtaacaacttcgctagata 29677742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 11 - 365
Target Start/End: Original strand, 17545071 - 17545427
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    ||||||||||||||| | || || | |||| |||||| ||| || ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  17545071 atcatcatatttgagtgttcgtaataccatattgatagtttagagaacttaaagttagaatggtggtaacaccatattttagtggtctcagcaccataac 17545170  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    ||||||| |||||||  | |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||      
T  17545171 aaagtggtaacaatat-agattaaagtggtttccgtattaaagagtggtcttagtatcatatttgagggtgtaaatctcgaatgattttctacaatgcgt 17545269  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||||||||| ||||||||||  ||||||||||||| |||||||||||| |||||||||   |||||||| ||||   |||| ||| ||||||||||    
T  17545270 tagttaaccgcactgttgtagatgtgcttgttttatcctcgaggtggcgtggttgatagtcttttttgcacaactttgaaaagtgtcacgaaacgtctta 17545369  T
Q  309 a-agagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttttt 365  Q
    | | | | |||  || |||| |||||||||||||||||||| ||||||||||||||||    
T  17545370 agaaaaaacgacctgatcgtaactcaacctagtaacaacttcggtagatattcttttt 17545427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 18344745 - 18344406
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| ||||| |||| |||| |||| |||| |||||| |||||| ||||||||| |||||||||  |||||||||||||||||||||||||| |||||||    
T  18344745 atcaccatatctgagaggtcgtagtaccatattgatagtttggagaacttaaagttagaatggtattaacaccatatttgagtggtctcagcgccataac 18344646  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | ||||| |||||||          ||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||    
T  18344645 agagtggtaacaatat---------gtggtttcagtattaaatagtggtcttagtaccatatttggaggtgtaattctcgaacgattttctacagtgcag 18344555  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtctta 308  Q
    ||||||| || |||||||||| ||  |||||||||||||||||  ||||||| | |||||||||||||||||| |||||| |||||||| ||||||||||    
T  18344554 tagttaatcgaacagttgtagctgggcttgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtctta 18344455  T
Q  309 aagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||||||||  |||||||||||||| ||||||||||||| ||| ||||    
T  18344454 aagagagcgacctggtcgtgactcaatctagtaacaacttcggttgata 18344406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 70 - 357
Target Start/End: Original strand, 7737682 - 7737971
Alignment:
Q  70 atggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttagtacc 168  Q
    |||||||||||||||| |||||||||||||| |||||||| | |||||  |||||| |||||||||||| ||||||||||||| || |||| || ||| |    
T  7737682 atggtggtaacaccatgtttgagtggtctcaacaccataatagagtggtgacaatatcatattaaagtgatttcagtattaaaagaatggttttggtatc 7737781  T
Q  169 atatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt-gata 267  Q
    ||||| |||| ||||| |||||||||||||||||||||||| ||||||| || ||| |||||| ||  |||||||||||||||||| |||||||| ||||    
T  7737782 atattggagg-tgtaattctcgaacggttttctacagtgcaatagttaatcgaacaattgtagttgggcttgttttatcctggaggcggcgtggttgata 7737880  T
Q  268 gtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    ||||| |||||||||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  7737881 gtctgtcttgcacaattttgggcagtgccacaaaacttcttaaagagagcgacatggtcgtgactcaacctagtaacaacttcggtggata 7737971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 66 - 357
Target Start/End: Original strand, 10160557 - 10160844
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa-gagtggtcttag 164  Q
    |||||||||||||| |||||||||||||||||||| ||||| || | |||||  | | ||||||||| |     ||||||||||||| || |||||||||    
T  10160557 tagaatggtggtaataccatatttgagtggtctcaacaccaaaatagagtggtcatagtaccatattga-----tttcagtattaaaagaatggtcttag 10160651  T
Q  165 taccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt- 263  Q
    ||||||||| || ||||||| |||||||||||||||||||||||| |||||||||||||||||| || ||| |||||||||||||||||| ||||||||     
T  10160652 taccatatt-gaaggtgtaattctcgaacggttttctacagtgca-tagttaaccgcacagttgcagctgagcttgttttatcctggaggcggcgtggtt 10160749  T
Q  264 gatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  10160750 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 10160844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 161 - 357
Target Start/End: Complemental strand, 29677554 - 29677356
Alignment:
Q  161 ttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgt 260  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||| |||||    
T  29677554 ttagtaccatatttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctggacttattttatcctggaggcggcgt 29677455  T
Q  261 gg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    || ||||||||||| |||||||| |||||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| | ||||||    
T  29677454 ggttgatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatgatcgtgactcaacctagtaacaacttcgctagata 29677356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 137 - 357
Target Start/End: Complemental strand, 30658460 - 30658238
Alignment:
Q  137 tggtttcagtattaaaga-gtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatga 235  Q
    |||||||||||||||| | || |||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||     
T  30658460 tggtttcagtattaaaaaagttgtcttagtaccatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctgg 30658362  T
Q  236 acttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
     |||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||  |||||||||||||    
T  30658361 gcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 30658262  T
Q  334 acctagtaacaactttggtagata 357  Q
    || |||||||||||| ||||||||    
T  30658261 acatagtaacaacttcggtagata 30658238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 74 - 357
Target Start/End: Complemental strand, 35602177 - 35601897
Alignment:
Q  74 tggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatt 173  Q
    ||||||||||||||||||||||||||| |||||||| | |||||  | | |||||||||     ||||||| ||||||||||||||||||||||||||||    
T  35602177 tggtaacaccatatttgagtggtctcaacaccataatagagtggtcatagtaccatatt-----ggtttcaatattaaagagtggtcttagtaccatatt 35602083  T
Q  174 tgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctg 272  Q
    ||   |||||| |||||||||||||||||||||||||||||||| || ||| |||||| ||   ||||||||||||||||| ||||||| ||||| ||||    
T  35602082 tggatgtgtaattctcgaacggttttctacagtgcagtagttaatcgaacaattgtagctgggtttgttttatcctggaggcggcgtggttgatactctg 35601983  T
Q  273 ccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
     ||||||||| |||||  |||||||| |||||||||||| |||||||  ||||||||| |||||||||||||||||| ||||||||    
T  35601982 tcttgcacaattttggacagtgccacgaaacgtcttaaaaagagcgacctggtcgtgattcaacctagtaacaacttcggtagata 35601897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 124 - 366
Target Start/End: Original strand, 19578300 - 19578543
Alignment:
Q  124 taccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcac 223  Q
    |||||||||| |||| ||| |||||||||||||| | ||| ||||||||| || ||||||||||||||||| |||||||||||||| ||||||||||| |    
T  19578300 taccatattagagtgattttagtattaaagagtgattttaataccatatt-gaaggtgtaaatctcgaacgattttctacagtgcaatagttaaccgccc 19578398  T
Q  224 agttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttg-ggtagtgccacaaaacgtcttaaagagagcgaaat 321  Q
    | |||||| || |||||||||| ||||||||  || |||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||  |    
T  19578399 aattgtagttggacttgttttaccctggaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtcttaaagagagcgatct 19578498  T
Q  322 ggtcgtgactcaacctagtaacaactttggtagatattctttttc 366  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||    
T  19578499 ggtcgtgactcaacctaataacaacttcggtagatattctctttc 19578543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 124 - 366
Target Start/End: Original strand, 21523610 - 21523848
Alignment:
Q  124 taccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcac 223  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||     ||||||||||||||||    
T  21523610 taccatattaaagtagtttaagttttaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacgattttcta-----cagtagttaaccgcac 21523704  T
Q  224 agttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaat 321  Q
    |||||||| ||||||||||||| ||| || | ||||||| ||||||||| |||||||||| |||||| |||||||| |||||| ||||||| ||| |  |    
T  21523705 agttgtagctgaacttgttttaacctagaagcggcgtggttgatagtctcccttgcacaattttgggcagtgccacgaaacgt-ttaaagatagcaacct 21523803  T
Q  322 ggtcgtgactcaacctagtaacaactttggtagatattctttttc 366  Q
    ||||||||||||||||| ||||||||   ||||||||||||||||    
T  21523804 ggtcgtgactcaacctattaacaactccagtagatattctttttc 21523848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 124 - 356
Target Start/End: Original strand, 19094375 - 19094614
Alignment:
Q  124 taccatattaaagtggtttcagtattaaa---gagtggtcttagta-ccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaacc 219  Q
    |||||||| | | ||||||||||||||||   |||||| |||| || |||||||||||||||||| ||||||||||||||||||||||||||| |||| |    
T  19094375 taccatataataatggtttcagtattaaattggagtggccttaatagccatatttgagggtgtaattctcgaacggttttctacagtgcagtaattaatc 19094474  T
Q  220 gcacagttgtagatgaacttg-ttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagc 316  Q
    |||||||||||| ||| |||| |||||||||||||| || |||| ||||| | |||||||||||| |||||| ||| ||| ||||||| |||| ||||||    
T  19094475 gcacagttgtagctgagcttgtttttatcctggaggcggtgtggttgatattttgccttgcacaattttgggcagtaccaaaaaacgttttaaggagagc 19094574  T
Q  317 gaaatggtcgtgactcaacctagtaacaactttggtagat 356  Q
    ||  || ||||||||||||||| ||||||||| |||||||    
T  19094575 gacctgatcgtgactcaacctaataacaacttcggtagat 19094614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 194 - 357
Target Start/End: Original strand, 42926714 - 42926881
Alignment:
Q  194 ggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtag 291  Q
    |||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||||||||| ||||||| ||||||||| |||||||||| |||||| ||    
T  42926714 ggttttctacggtgcagtagttaaccgcacagttgtagttgagcttgtattatcctggaggcggcgtggttgatagtctaccttgcacaattttgggcag 42926813  T
Q  292 tgccacaaaac--gtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||| ||||  |||||||||||||||   || ||||||||||||||||||||||||| ||||||||    
T  42926814 tgccacgaaacgtgtcttaaagagagcggcctgatcgtgactcaacctagtaacaacttcggtagata 42926881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 137 - 357
Target Start/End: Complemental strand, 30631780 - 30631554
Alignment:
Q  137 tggtttcagtattaaa-gagtggtcttagtaccatatttgagggtgtaaat-ctcgaacggttttctacagtgcagtagttaaccgc---acagttgtag 231  Q
    |||||||| ||||||| |||| |||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| |||||||   ||||||| ||    
T  30631780 tggtttcaatattaaaagagttgtcttagtaccatatt-gaaggtgtaaattctcgaacggttttctacagtgcagtagataaccgcacaacagttgcag 30631682  T
Q  232 atgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtga 329  Q
     ||  |||||||||||||||||||||||||| |||||||||  ||||||||| ||| || | |||||| ||| || |||||||||| ||  |  ||||||    
T  30631681 ttgggcttgttttatcctggaggtggcgtggttgatagtctttcttgcacaatttttggcaatgccacgaaaagttttaaagagagtgacctaatcgtga 30631582  T
Q  330 ctcaacctagtaacaactttggtagata 357  Q
    ||||||||||||||||||| ||||||||    
T  30631581 ctcaacctagtaacaacttcggtagata 30631554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 199 - 357
Target Start/End: Original strand, 35638957 - 35639117
Alignment:
Q  199 tctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgcca 296  Q
    ||||||||||||||||||| || |||||||||| ||| |||||||||||||||||| ||||||| |||||  ||| ||||||||| |||||| |||||||    
T  35638957 tctacagtgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatacgctgtcttgcacaattttgggcagtgcca 35639056  T
Q  297 caaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    | |||||||||||| |||||||  || |||||| ||||| |||||||||||| ||||||||    
T  35639057 cgaaacgtcttaaaaagagcgacctgatcgtgattcaacttagtaacaacttcggtagata 35639117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 66 - 224
Target Start/End: Original strand, 17453414 - 17453564
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||| || |||||||||||||||||||||||| |||||||| | |||||  ||||||||||||||     ||||||  |||| ||| ||||||||||    
T  17453414 tagaatgatgataacaccatatttgagtggtctcaacaccataatagagtggttacaataccatatta-----gtttca--attatagaatggtcttagt 17453506  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcaca 224  Q
    |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||    
T  17453507 accatatt-gaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcaca 17453564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 6297719 - 6297830
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||| |||||||||||||||||| || ||||| | | ||| |||||||||||||     |||||||||||||||||| ||||||||||    
T  6297719 tagaatggtggtaacatcatatttgagtggtctcaacaacataatagaatggtaacaataccatat-----tggtttcagtattaaagaatggtcttagt 6297813  T
Q  166 accatatttgagggtgt 182  Q
    | |||||| ||||||||    
T  6297814 aacatattagagggtgt 6297830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 28855266 - 28855156
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||||||||||||||||||  ||||||||||  | | |||  ||||||||||||     ||||||||||||| ||||||| |||||||    
T  28855266 tagaatggtggtaacaccatatttgagtggttgcagcaccatagtagaatggtcacaataccatat-----tggtttcagtatt-aagagtgatcttagt 28855173  T
Q  166 accatatttgagggtgt 182  Q
    ||||||| |||||||||    
T  28855172 accatatctgagggtgt 28855156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 42914737 - 42914639
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| || ||||||||| | |||||||||||||||| |||  ||||||||||||||||    
T  42914737 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtgactcaacc 42914639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 263 - 359
Target Start/End: Complemental strand, 20711515 - 20711418
Alignment:
Q  263 tgatagtctgccttgcacaatttgg-gtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatatt 359  Q
    |||||||||| |||||||||||| | | ||||| || |||| |||||||  ||| || ||||||||||||||||||||||||||||| ||||||||||    
T  20711515 tgatagtctgtcttgcacaattttgagcagtgctacgaaacatcttaaaaggagtgatatggtcgtgactcaacctagtaacaacttcggtagatatt 20711418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 5089373 - 5089277
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaa 334  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| |||| ||||||| | ||||||||||||||||||||  ||||| ||||||||    
T  5089373 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcatgactcaa 5089277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 19538647 - 19538536
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||| ||||||||||| | ||||||||| |||||||||| | |||||  ||| ||||||||     ||||||||||||||||||||| ||||| |    
T  19538647 tagaatggtagtaacaccataatagagtggtcttagcaccataatagagtggtcacattaccatat-----tggtttcagtattaaagagtgatcttaat 19538553  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||| ||||    
T  19538552 accatattagagagtgt 19538536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 42723451 - 42723546
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  42723451 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 42723546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 42728620 - 42728715
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  42728620 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 42728715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 44096397 - 44096302
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  44096397 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 44096302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 44754596 - 44754691
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  44754596 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 44754691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 44759762 - 44759857
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  44759762 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 44759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 469
Target Start/End: Original strand, 10160849 - 10160942
Alignment:
Q  377 aatttggaaagccaaatacaacagtttggaa-tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttattg 469  Q
    ||||| |||| |||||||||| ||||||||| ||||||||||||| ||||||||| ||   ||||||||||||||| |||||| ||| ||||||    
T  10160849 aatttagaaatccaaatacaagagtttggaaatccaaaaacaacaattttaagacgttcttatctgctatgtctaccgaagaagttaattattg 10160942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 40518472 - 40518567
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||| |||| ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  40518472 tgttttatcctggagacggcgcggttgctagtctaccttgcactatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 40518567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 32079546 - 32079460
Alignment:
Q  167 ccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggag 253  Q
    |||||||| ||||||||| ||||||||| ||  ||| | |||| ||||||| ||||||||||||| ||||| | |||||||||||||    
T  32079546 ccatatttaagggtgtaattctcgaacgattagctataatgcaatagttaatcgcacagttgtagctgaaccttttttatcctggag 32079460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 29677737 - 29677694
Alignment:
Q  377 aatttggaaagccaaatacaacagtttggaatccaaaaacaaca 420  Q
    |||||||||| ||||||||||||||||| |||||||||||||||    
T  29677737 aatttggaaatccaaatacaacagtttgaaatccaaaaacaaca 29677694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 30643451 - 30643408
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataa 109  Q
    |||||||||||||||| |||||||||||||||||| ||||||||    
T  30643451 tagaatggtggtaacatcatatttgagtggtctcaacaccataa 30643408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 40392414 - 40392340
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaaga 312  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| || ||||||||| | ||||||||||||||    
T  40392414 tgttttatcctggagacggcgtggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaaga 40392340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 30658230 - 30658141
Alignment:
Q  380 ttggaaagccaaatacaacagtttggaa-tccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaattacttatt 468  Q
    |||||||  ||||||||||||||||||| ||||||||||||| ||||||||| |||   | || ||||||||  |||||| |||||||||    
T  30658230 ttggaaatgcaaatacaacagtttggaaatccaaaaacaacaattttaagacgtttttttatgttatgtctatcgaagaagttacttatt 30658141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 44957437 - 44957513
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgg-gtagtgccacaaaacgtcttaaagaga 314  Q
    ||||||||||||||| || |||||| |||||||||| |||||||||||   | |||||||||||||||||||||||||    
T  44957437 tgttttatcctggagatgtcgtggttgatagtctgc-ttgcacaattttttgcagtgccacaaaacgtcttaaagaga 44957513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 342
Target Start/End: Complemental strand, 160111 - 160031
Alignment:
Q  263 tgatagtctgccttgcacaattt-gggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaa 342  Q
    |||||| || ||||||||||||| |||||||| |   |||||| |||||||||||||  |||||||| |||||||||||||    
T  160111 tgatagcctaccttgcacaattttgggtagtgtcgtgaaacgtattaaagagagcgacctggtcgtgtctcaacctagtaa 160031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 9189928 - 9189972
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  9189928 aatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 9189972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 15489798 - 15489834
Alignment:
Q  321 tggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||||||||||||||||||| ||||||||    
T  15489798 tggtcgtgactcaacctagtaacaacttcggtagata 15489834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 19892591 - 19892635
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  19892591 aatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 19892635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 611
Target Start/End: Complemental strand, 30655473 - 30655360
Alignment:
Q  496 aaggataaatcaggctataaaaatacatattttggactgatataatgaagtgattgttgttataacaacgacaataagagattcacatatccgaatcaga 595  Q
    |||||||||||| |||||| |||||||| ||| | ||||  | ||||||||  |||||||||||||||| ||| ||||| ||||||||||  || || ||    
T  30655473 aaggataaatcaagctatataaatacatctttcg-actgtaacaatgaagtt-ttgttgttataacaacaacactaagaaattcacatatgtgactcgga 30655376  T
Q  596 atctgtttaaaattta 611  Q
    || ||||| |||||||    
T  30655375 atttgtttgaaattta 30655360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 13291455 - 13291540
Alignment:
Q  153 gagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaactt 239  Q
    ||||||| ||||||| ||||| |||| | ||| | |||||||||||||||| | ||| ||||||| |||| |||||||| |||||||    
T  13291455 gagtggttttagtacgatattggaggtt-taattatcgaacggttttctactgagcaatagttaatcgcatagttgtagctgaactt 13291540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 28751759 - 28751824
Alignment:
Q  268 gtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||| |||||||||| || ||||||||| | |||||||| ||||| |||||  |||||||||||||    
T  28751759 gtctaccttgcacaacttaggtagtgccgcgaaacgtctaaaagaaagcgacctggtcgtgactca 28751824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 30629115 - 30629074
Alignment:
Q  69 aatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    ||||||||||||||||||||||||||||| ||  ||||||||    
T  30629115 aatggtggtaacaccatatttgagtggtcacaataccataac 30629074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 420
Target Start/End: Complemental strand, 30631546 - 30631505
Alignment:
Q  380 ttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  30631546 ttggaaatccaaatacaacagtttggaaatccaaaaacaaca 30631505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 38591515 - 38591447
Alignment:
Q  86 atttgagtggtctcagcaccataacaaagtggcaacaatacc--atattaaagtggtttcagtattaaa 152  Q
    |||||||||||||||  ||||||| |||||||  ||||||||  |||||| |||||||| |||||||||    
T  38591515 atttgagtggtctcaataccataataaagtggtcacaataccatatattagagtggttttagtattaaa 38591447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 18344401 - 18344357
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||| ||| |||||||||||||||||| |||||||||||||||    
T  18344401 aatttgaaaatccaaatacaacagtttggaaatccaaaaacaaca 18344357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 206; Significance: 1e-112; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 66 - 357
Target Start/End: Original strand, 9714 - 10007
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  9714 tagaatggtggtaacaccatatttgagtggtctcaacaccataacagagtggtaacaataccatattaaagtggtttcagtattatagagtggtcttagt 9813  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||||||||| || |||||||||| ||  |||||||||||||||||| ||||||| ||    
T  9814 accatatttggaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttg 9913  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  9914 atagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 10007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 10012 - 10056
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaaca 420  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||    
T  10012 aatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 10056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 186; Significance: 1e-100; HSPs: 5)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 66 - 357
Target Start/End: Complemental strand, 4341 - 4049
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| |||| | ||||||||||||||||||||||||||||||||||||||||    
T  4341 tagaatggtggtaacaccatatttgagtggtctcagcaccatat-agagtggtaacagtgccatattaaagtggtttcagtattaaagagtggtcttagt 4243  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    ||||||||||  ||||||| ||||||||| |||||||||||||||||||||| || |||||||||| ||  |||||||||||||||||| ||||||| ||    
T  4242 accatatttggaggtgtaattctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttg 4143  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagata 357  Q
    |||||||||||||||||| |||||| |||||||| ||| ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  4142 atagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 4049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 11 - 305
Target Start/End: Original strand, 443718 - 444011
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| ||||||| || |||| ||||||||| ||||| ||||||| || |||||| ||||||||||| |||||||||||| |||||||||| ||||||||     
T  443718 atcaccatatttaagtggtcgtagtgccatattgatgttttggagaaattaaagttagaatggtggaaacaccatattttagtggtctcaacaccataat 443817  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | |||||  |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||     
T  443818 agagtggttacaatatcatattaaggtgatttcagtattaaagagtggtcttagtaccatatttgagggtgtaattctcgaacggttttctatagtgca- 443916  T
Q  211 tagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaatttgggtagtgccacaaaacgtc 305  Q
    ||||||||||||||||||||| ||  ||||||||||||| |||  ||||||| ||||||||||||||||||||||| || |||||||| |||||||    
T  443917 tagttaaccgcacagttgtagctgggcttgttttatcct-gagacggcgtggttgatagtctgccttgcacaattttggcagtgccacgaaacgtc 444011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 4044 - 3999
Alignment:
Q  377 aatttggaaagccaaatacaacagtttgg-aatccaaaaacaacag 421  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||    
T  4044 aatttggaaatccaaatacaacagtttggaaatccaaaaacaacag 3999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 150765 - 150729
Alignment:
Q  61 aaagctagaatggtggtaacaccatatttgagtggtc 97  Q
    |||| ||||||||||||||||||||||||||||||||    
T  150765 aaagttagaatggtggtaacaccatatttgagtggtc 150729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 140025 - 139989
Alignment:
Q  61 aaagctagaatggtggtaacaccatatttgagtggtc 97  Q
    |||| |||||| |||||||||||||||||||||||||    
T  140025 aaagttagaatagtggtaacaccatatttgagtggtc 139989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 143; Significance: 9e-75; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 66 - 583
Target Start/End: Complemental strand, 83326 - 82830
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| | |||||  | | ||  |||||     |||||||||||  ||||||| |||||||    
T  83326 tagaatggtagtaacaccatatttgagtggtctcaacaccataatagagtggttatagtattatatt-----ggtttcagtat--aagagtgatcttagt 83234  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| ||| ||| ||    
T  83233 accatatt-gaaggtgtaattctcgaaaggttttctacagtgcagtagttaaccgcacagttgcagctgagcttgttttatcctggaggcggcatggttg 83135  T
Q  265 atagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttt 363  Q
    ||||||||||||||| || ||||||| ||| ||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||| |          
T  83134 atagtctgccttgcataattttgggtggtgtcacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagaaa------ 83041  T
Q  364 ttcnnnnnnnnttaatttggaaagcc-aaatacaacagttt-ggaatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaatt 461  Q
                 |||||||||| || |||||||||||||| | ||||||||||||||| |||||| || |||| | |||  |||||||| |||||| ||    
T  83040 ---------acagaatttggaaaaccaaaatacaacagtttagaaatccaaaaacaacaattttaaaacgtttcaaactgtcatgtctaccgaagaagtt 82950  T
Q  462 acttattgagattttgttgtaccaaaattaaaacaaggataaatcaggctataaaaatacatattttggactgatataatgaagtgattgttgttataac 561  Q
    ||||||| || ||  ||| | || ||| ||||||||| |||||||| | |||| |||||||| ||||  ||||| | ||||||||| |||||||||||||    
T  82949 acttattaaggttcagttatccctaaa-taaaacaagaataaatcaagttatagaaatacat-ttttccactgaaacaatgaagtgtttgttgttataac 82852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 123; Significance: 8e-63; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 66 - 523
Target Start/End: Complemental strand, 4241 - 3802
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | ||||| |||| |||||||  |||||| ||| ||||||||||||||||||||||    
T  4241 tagaatggtggtaacaccatatttgagtggtctcagtaccataatagagtggtaacattaccataaaaaagtgatttaagtattaaagagtggtcttagt 4142  T
Q  166 accatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tg 264  Q
    ||||||||| ||||| ||||||||||| ||||||||||| |||||||||                  ||  |||||||||||||||||| ||||||| ||    
T  4141 accatatttaagggtataaatctcgaatggttttctacaatgcagtagt------------------tgggcttgttttatcctggaggcggcgtggttg 4060  T
Q  265 atagtctgccttgc-acaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttt 363  Q
    || || || ||||| | ||||| || | ||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  4059 atggtatgtcttgcaaaaattttggcattgccataaaaagtcttaaagagagcgatatggtcgtgactcaacctagtaacaacttcggtagatattcttt 3960  T
Q  364 ttcnnnnnnnnttaatttggaaagccaaatacaac-agtttggaatccaaaaacaacagttttaagacatttcgatctgctatgtctacagaagaaatta 462  Q
    |||          |||||| |||  ||||||| || | |||  ||||||||||||||| |||||| |  ||||   ||||||||||||  ||||||||||    
T  3959 ttcaaaaatag--aatttgaaaattcaaatacgacaattttaaaatccaaaaacaacaattttaaaatgtttcctactgctatgtctatcgaagaaatta 3862  T
Q  463 cttattgagattttgttgtaccaaaattaaaacaaggataaatcaggctataaaaatacat 523  Q
    |||||| || || |||||| || ||| || |||||||||||| ||  |||||||| |||||    
T  3861 cttattaagcttctgttgtccctaaa-tacaacaaggataaaccaaactataaaattacat 3802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 118; Significance: 7e-60; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 122 - 357
Target Start/End: Complemental strand, 25611 - 25374
Alignment:
Q  122 aataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgc 221  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| |||||||||||||    
T  25611 aatatcatattaaagtggtttcaatattaaagagtggtcttagtaccatatttgaagatgtaagtctcgaacggttttctacagtgtagtagttaaccgc 25512  T
Q  222 acagttgtagatgaacttgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgg-gtagtgccacaaaacgtcttaaagagagcgaa 319  Q
    |||||||||| ||  |||||||||||||||| | |||||||| ||||||||| ||||||||||||   | |||| |||  |||||||||||||||| ||     
T  25511 acagttgtagttgggcttgttttatcctggacgcggcgtggttgatagtctgtcttgcacaattttacgcagtgtcacgtaacgtcttaaagagagtgac 25412  T
Q  320 atggtcgtgactcaacctagtaacaactttggtagata 357  Q
     |  | ||||||||||||||||||||||| | ||||||    
T  25411 ctaattgtgactcaacctagtaacaacttcgatagata 25374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 16 - 263
Target Start/End: Complemental strand, 29481 - 29226
Alignment:
Q  16 catatttgagcggtcatagtgccattttgatattttgg----aaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataaca 111  Q
    |||||||||| |||| |||||| || ||||||||||||    | || |||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  29481 catatttgagtggtcgtagtgcaatattgatattttggttagagaaattaaagttagaatggtggtaacaccatatttgagtggtctcagaaccataaca 29382  T
Q  112 aagtggcaacaataccatattaaagtggtttcagtatt-aaagagtggtc----ttagtaccatatttgagggtgtaaatctcgaacggttttctacagt 206  Q
     ||||| |||||||| ||| |||| ||||||||||||| |||||  | ||    |||||| |||| |||| ||||||| ||||||||||||||||||| |    
T  29381 gagtggtaacaatactatactaaaatggtttcagtattaaaagaacgatcttaattagtatcata-ttgaaggtgtaattctcgaacggttttctacaat 29283  T
Q  207 gcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt 263  Q
    ||||||||||||||||||||| ||| |  |||| |||||||||| ||  ||||||||    
T  29282 gcagtagttaaccgcacagttatagttagacttattttatcctgaagacggcgtggt 29226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 25766 - 25637
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| |||| ||||| ||| |||||| |||||| || |||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  25766 atcaccatatttgagtggtcgtagtgtcatattgatactttggagaaattaaaattagaatggtggtaacaccatatttgagtggtctcagaaccataac 25667  T
Q  111 aaagtggcaacaataccatattaaagtggt 140  Q
    | ||||| || |||| ||||||||||||||    
T  25666 agagtggtaataatatcatattaaagtggt 25637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 107; Significance: 3e-53; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 144 - 422
Target Start/End: Complemental strand, 567 - 281
Alignment:
Q  144 agtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaac------cgcacagttgtagatgaac 237  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||      ||||||||||||| ||| |    
T  567 agtatgaaagagtggtcttagtaccgtatttgagggtgtaaatctcaaacggttttctacagtgcagtagttaaccgcgcgcgcacagttgtagctgagc 468  T
Q  238 ttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaac 335  Q
    ||||||||||||||||| | ||||| ||||||| || ||||||||| |||||  | |||||  |||||||||||| | ||||| || |||||||||||||    
T  467 ttgttttatcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgacatagtcgtgactcaac 368  T
Q  336 ctagta---acaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagt 422  Q
    ||||||   ||||||| |||||||||||||||||          ||||| |||| | |||||||||||||||| |||||||||||||||||    
T  367 ctagtaattacaacttcggtagatattctttttcaaaaag----aatttcgaaatctaaatacaacagtttggaaatccaaaaacaacagt 281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 107; Significance: 3e-53; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 144 - 422
Target Start/End: Original strand, 164928 - 165214
Alignment:
Q  144 agtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaac------cgcacagttgtagatgaac 237  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||      ||||||||||||| ||| |    
T  164928 agtatgaaagagtggtcttagtaccgtatttgagggtgtaaatctcaaacggttttctacagtgcagtagttaaccgcgcgcgcacagttgtagctgagc 165027  T
Q  238 ttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaac 335  Q
    ||||||||||||||||| | ||||| ||||||| || ||||||||| |||||  | |||||  |||||||||||| | ||||| || |||||||||||||    
T  165028 ttgttttatcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgacatagtcgtgactcaac 165127  T
Q  336 ctagta---acaactttggtagatattctttttcnnnnnnnnttaatttggaaagccaaatacaacagtttgg-aatccaaaaacaacagt 422  Q
    ||||||   ||||||| |||||||||||||||||          ||||| |||| | |||||||||||||||| |||||||||||||||||    
T  165128 ctagtaattacaacttcggtagatattctttttcaaaaag----aatttcgaaatctaaatacaacagtttggaaatccaaaaacaacagt 165214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 148198 - 148316
Alignment:
Q  32 tagtgccattttgatattttggaaaacttaaa-gctagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccata 130  Q
    |||| |||| |||||| |||||| |||||||| | ||||||||||||||||| ||||||||||||||||| || ||||| | ||||  ||||||||||||    
T  148198 tagtaccatattgatagtttggagaacttaaaagttagaatggtggtaacactatatttgagtggtctcaacatcataatagagtgataacaataccata 148297  T
Q  131 ttaaagtggtttcagtatt 149  Q
    |||| ||||||| ||||||    
T  148298 ttaatgtggttttagtatt 148316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 182 - 348
Target Start/End: Complemental strand, 35786 - 35618
Alignment:
Q  182 taaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcac 280  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  35786 taaatctcgaacgattttctacagtgcagtagttaaccgcacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcac 35687  T
Q  281 aa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    || |||||  |||| ||| |||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  35686 aattttggccagtgtcacgaaacgtcttaaagagagcggcatggtcgtaacttaacctagtaacaactt 35618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 168 - 366
Target Start/End: Complemental strand, 255983 - 255783
Alignment:
Q  168 catatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgt-ggtgat 266  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| ||| | | ||||    
T  255983 catatttgagggtgtaatcctcgaacggttttctacagtgcagtagttaaccacacagttgtagctggacttgttttatcctggaggcggcatagttgat 255884  T
Q  267 agtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatattcttttt 365  Q
    ||| || ||||||||| ||||||||||||||| |||| |||||||||||| ||  |||||||| || ||| ||||||||| ||||||||||||||| |||    
T  255883 agtatgtcttgcacaattttgggtagtgccacgaaacctcttaaagagagtgacctggtcgtgtcttaacatagtaacaaatttggtagatattctcttt 255784  T
Q  366 c 366  Q
    |    
T  255783 c 255783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 5608 - 5410
Alignment:
Q  11 atcatcatatttgagcggtcatagtgccattttgatattttggaaaacttaaagctagaatggtggtaacaccatatttgagtggtctcagcaccataac 110  Q
    |||| |||||||||| ||||||||| ||||   |||| |||||| |||||||||  ||||| |||||||||||||||||||||||| |||||||||||||    
T  5608 atcaccatatttgagtggtcatagtaccataaagataatttggagaacttaaagtaagaatagtggtaacaccatatttgagtggtatcagcaccataac 5509  T
Q  111 aaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcag 210  Q
    | | | | ||||||| ||||||||||||||||||    | ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||     
T  5508 ataattgtaacaata-catattaaagtggtttca----ttaagagtggtcttagtaccatatttgagggtgtaaatctcaaacagttttctacggtgcaa 5414  T

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Target: scaffold0012 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 150 - 355
Target Start/End: Original strand, 165998 - 166204
Alignment:
Q  150 aaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcct 249  Q
    ||||| |||||||||||||||| |  ||| ||||| |||||||||||||| |||||||||||| ||||||||||||||| || ||  |||||||||||||    
T  165998 aaagattggtcttagtaccatagtaaagg-tgtaattctcgaacggttttttacagtgcagtaattaaccgcacagttgcagctgggcttgttttatcct 166096  T
Q  250 ggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaact 347  Q
    ||||| ||||||| ||||||| || ||||||||| ||| || |||||||| ||||||||||||||||||||  |||| |||||||||||||||| ||| |    
T  166097 ggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactcaacctagtatcaatt 166196  T
Q  348 ttggtaga 355  Q
    | ||||||    
T  166197 tcggtaga 166204  T

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Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 377 - 423
Target Start/End: Original strand, 166211 - 166259
Alignment:
Q  377 aatttggaaagccaaa-tacaacagtttgg-aatccaaaaacaacagtt 423  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  166211 aatttggaaaaccaaaatacaacagtttggaaatccaaaaacaacagtt 166259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 46046 - 45935
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | | ||| |||| |||| ||||     ||||||||||||||||||||||||||||    
T  46046 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagaatggtaacagtaccgtatt-----ggtttcagtattaaagagtggtcttagt 45952  T
Q  166 accatatttgagggtgt 182  Q
    |||||||||||||||||    
T  45951 accatatttgagggtgt 45935  T

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Target: scaffold0017 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 152741 - 152852
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | | ||| |||| |||| ||||     ||||||||||||||||||||||||||||    
T  152741 tagaatggtggtaacaccatatttgagtggtctcaacaccataatagaatggtaacagtaccgtatt-----ggtttcagtattaaagagtggtcttagt 152835  T
Q  166 accatatttgagggtgt 182  Q
    |||||||||||||||||    
T  152836 accatatttgagggtgt 152852  T

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Target: scaffold0128 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 144 - 312
Target Start/End: Complemental strand, 13460 - 13292
Alignment:
Q  144 agtattaaagagtggtcttagtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttt 243  Q
    ||||||||| |||||||||||||||||||| |||| |||||||  |||||  |||||||||||| ||||||||||||||||||||||| ||||||||||     
T  13460 agtattaaa-agtggtcttagtaccatattagagg-tgtaaattgcgaaccattttctacagtgaagtagttaaccgcacagttgtagttgaacttgttg 13363  T
Q  244 tatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaaga 312  Q
    |||| ||||||   | ||| ||||||||| ||||| |||| |||||| |||| ||| ||||||||||||||    
T  13362 tatcttggaggcaccatggttgatagtctaccttgaacaattttgggcagtgtcaccaaacgtcttaaaga 13292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 60; Significance: 3e-25; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 66 - 211
Target Start/End: Original strand, 146257 - 146406
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaa---gagtggtctt 162  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| | | |||  |||||||||||| | |||||||||| |||||||   |||||  |||    
T  146257 tagaatggtggtaacaccatatttgaatggtctcagtaccataatagaatggtcacaataccatataatagtggtttcattattaaattcgagtgtcctt 146356  T
Q  163 agta-ccatatttgagggtgtaaatctcgaacggttttctacagtgcagt 211  Q
    | || ||||||||||| |||||| ||||||||  ||||||||||||||||    
T  146357 actagccatatttgagagtgtaattctcgaacaattttctacagtgcagt 146406  T

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Target: scaffold0011; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 1660 - 1562
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| |||||||||||| | ||||||||||||||||||||  ||||||||||| ||||    
T  1660 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgacttaacc 1562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 7141 - 7043
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| |||||||||||| | |||||||||||||||| |||  ||||||| ||||||||    
T  7141 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtaactcaacc 7043  T

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Target: scaffold0011; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 155486 - 155542
Alignment:
Q  207 gcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtggt 263  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| |||| ||||||||    
T  155486 gcagtagttaatcgcacagttgtagctgaacttgttttatcctagaggcggcgtggt 155542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 1309 - 1188
Alignment:
Q  164 gtaccatatttgagggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg- 262  Q
    |||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||| ||||||||||||  ||||||||  ||||||     
T  1309 gtaccatatt-gaaggtgtaaatctcgaacgattttctatagtgcagtagttaaccgcacagtcgtagctgaacttgtttttgcctggaggcagcgtggt 1211  T
Q  263 tgatagtctgccttgcacaattt 285  Q
    | |||||| |||||||| |||||    
T  1210 ttatagtccgccttgcataattt 1188  T

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Target: scaffold0060 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 47692 - 47801
Alignment:
Q  68 gaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtac 167  Q
    ||||||||||||||||||||||||||||||||| |||||||| | |     ||||||||||||||     ||||||||||||||||||||||||||||||    
T  47692 gaatggtggtaacaccatatttgagtggtctcaacaccataatagaaaaataacaataccatatt-----ggtttcagtattaaagagtggtcttagtac 47786  T
Q  168 catatttgagggtgt 182  Q
    |||||| ||||||||    
T  47787 catattagagggtgt 47801  T

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Target: scaffold0060; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 52733 - 52844
Alignment:
Q  66 tagaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagt 165  Q
    |||||||||||||| |||||||||||| ||||||| |||||||| | | ||  || |||| ||||||     ||||||||||||||||||||||||||||    
T  52733 tagaatggtggtaaaaccatatttgagcggtctcaacaccataatagaatgataaaaatatcatatt-----ggtttcagtattaaagagtggtcttagt 52827  T
Q  166 accatatttgagggtgt 182  Q
    |||||||| ||||||||    
T  52828 accatattagagggtgt 52844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 239 - 342
Target Start/End: Complemental strand, 37105 - 37001
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacct 337  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||| ||||||||| | |||||||||||||| |||||  ||||||||||||| ||     
T  37105 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcacccc 37006  T
Q  338 agtaa 342  Q
    |||||    
T  37005 agtaa 37001  T

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Target: scaffold0132 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 2772 - 2870
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| |||||||||| ||| ||||||||||||||| ||||  ||||||||||||||||    
T  2772 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgactcaacc 2870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 10732 - 10830
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    |||||||||||||||  |||||||| | |||||| |||||||||| |||||||||| ||| ||||||||||||||| ||||  ||||||||||||||||    
T  10732 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgactcaacc 10830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 120 - 348
Target Start/End: Complemental strand, 2526 - 2293
Alignment:
Q  120 acaataccatattaaagtggtttcagtattaaa---gagtggtcttagtac-catatttgagggtgtaaatctcgaacggttttctacagtgcagtagtt 215  Q
    |||||||||||||  |||||||||| |||||||   |||||| |||| ||  ||||||| ||||||||| |||| |||  |||||||| |||||||||||    
T  2526 acaataccatattttagtggtttcaatattaaatttgagtggccttaatagacatatttaagggtgtaattctccaacaattttctacggtgcagtagtt 2427  T
Q  216 aaccgcacagttgtagatgaacttgttttatcctggaggtggcgtgg-tgatagtctgccttgcacaa-tttgggtagtgccacaaaacgtcttaaagag 313  Q
    || | ||||||||||  |||  ||||||||| || |||| ||||||| ||||| |||| ||||||||| |||    | || |||||||||| ||||||||    
T  2426 aatctcacagttgtacctgagtttgttttatactagaggcggcgtggttgata-tctgtcttgcacaattttaaacaatggcacaaaacgtattaaagag 2328  T
Q  314 agcgaaatggtcgtgactcaacctagtaacaactt 348  Q
    | |||  || || |||||||||||| |||||||||    
T  2327 aacgacctgatcatgactcaacctaataacaactt 2293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 263 - 359
Target Start/End: Complemental strand, 15354 - 15257
Alignment:
Q  263 tgatagtctgccttgcacaatttgg-gtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaacaactttggtagatatt 359  Q
    |||||||||| |||||||||||| | | ||||| || |||| |||||||  ||| || ||||||||||||||||||||||||||||| ||||||||||    
T  15354 tgatagtctgtcttgcacaattttgagcagtgctacgaaacatcttaaaaggagtgatatggtcgtgactcaacctagtaacaacttcggtagatatt 15257  T

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Target: scaffold0055 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 3153 - 3058
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  3153 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 81382 - 81477
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  81382 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 81477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 182
Target Start/End: Original strand, 1088 - 1170
Alignment:
Q  95 gtctcagcaccataacaaagtggcaacaataccatattaaagtggtttcagtattaaagagtggtcttagtaccatatttgagggtgt 182  Q
    |||||| |||||||| | | ||| ||||||||||||||     |||||||||||||||||||||||||||||||||||| ||||||||    
T  1088 gtctcaacaccataatagaatggtaacaataccatatt-----ggtttcagtattaaagagtggtcttagtaccatattagagggtgt 1170  T

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Target: scaffold0166 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 19226 - 19302
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacctagtaa 342  Q
    |||||| |||||||||| || ||||||||| | |||||||||||||| ||||| |||||||||||||| || |||||    
T  19226 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaa 19302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 13740 - 13835
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  13740 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 13835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 9208 - 9303
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  9208 tgttttatcctggagacggcgcggttgctagtcttccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 9303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 31640 - 31545
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||||||||||||  |||| ||| | |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  31640 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 31545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 318
Target Start/End: Complemental strand, 26468 - 26388
Alignment:
Q  239 tgttttatcctggaggtggcgtggt-gatagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcga 318  Q
    |||||||||||||||  |||| ||| | |||||| ||||||||||||  ||||||||| | ||||||||||||||||||||    
T  26468 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcga 26388  T

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Target: scaffold0517 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 3630 - 3563
Alignment:
Q  266 tagtctgccttgcacaatttgggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactca 333  Q
    |||||| |||||||||| || ||||||||| | |||||||||||||| |||||  |||||||||||||    
T  3630 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 3563  T

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Target: scaffold0067 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 34018 - 34067
Alignment:
Q  287 ggtagtgccacaaaacgtcttaaagagagcgaaatggtcgtgactcaacc 336  Q
    ||||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  34018 ggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 34067  T

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Target: scaffold0037 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 42243 - 42138
Alignment:
Q  42 ttgatattttggaaaacttaaagct-agaatggtggtaacaccatatttgagtggtctcagcaccataacaaagtggcaacaataccatattaaagtggt 140  Q
    ||||||||||||| || |||||| | |||||||||  ||||||||| |||||||||||||| | | ||| | ||| || ||  || ||||||| ||||||    
T  42243 ttgatattttggagaagttaaaggttagaatggtgagaacaccatacttgagtggtctcagtatcctaatagagttgctacggtatcatattagagtggt 42144  T
Q  141 ttcagt 146  Q
    ||||||    
T  42143 ttcagt 42138  T

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Target: scaffold0330 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 439 - 523
Target Start/End: Complemental strand, 19867 - 19784
Alignment:
Q  439 ctgctatgtctacagaagaaattacttattgagattttgttgtaccaaaattaaaacaaggataaatcaggctataaaaatacat 523  Q
    ||||||||||||  |||||||||||||||| || || |||||| || ||| || |||||||||||| ||  |||||||| |||||    
T  19867 ctgctatgtctatcgaagaaattacttattaagcttctgttgtccctaaa-tacaacaaggataaaccaaactataaaattacat 19784  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 171740 - 171795
Alignment:
Q  263 tgatagtctgccttgcacaatttg-ggtagtgccacaaaacgtcttaaagagagcga 318  Q
    ||||||||||| |||||||||||  || |||||||| ||||||||||||||||||||    
T  171740 tgatagtctgc-ttgcacaattttaggcagtgccacgaaacgtcttaaagagagcga 171795  T

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