View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13435_high_3 (Length: 349)
Name: NF13435_high_3
Description: NF13435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13435_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 32973928 - 32974264
Alignment:
| Q |
1 |
acctttctaccctaacccatcatacccaccaccacca------------catcaacccgaaactcaagtcttccacactgggcacgtgtcccgtaatgac |
88 |
Q |
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| T |
32973928 |
acctttctaccctaacccatcatacccaccaccaccacaacaacaaccacatcaacccgaaactcaagtcttccacaccgggcacgtgtcccgtaatgac |
32974027 |
T |
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| Q |
89 |
aatttcaacaattaccctcaaccaccacaacctcaccaagaaactcaagtgttccacactggacacgtgtcccatgaaaacttcaacagttaccctcaac |
188 |
Q |
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| T |
32974028 |
aatttcaacaattaccctcaacaaccacaacctcaccaagaaactcaagtgttccacactggacacgtgtcccatgaaaacttcaacagttaccctcaac |
32974127 |
T |
|
| Q |
189 |
caccaccacctcaatctcatcatcaacaacccagctacggcgctgcgtactcacctgcaccaccatccgtaccggatcacacctccgccccattcccaaa |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32974128 |
caccaccacctcaatctcatcatcaacaacccagctacggcgctgcgtacccacctgcaccaccatccgtaccggatcacacctccgccccattcccaaa |
32974227 |
T |
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| Q |
289 |
cgcaactgttcaccatgtttctcatgaaacccataac |
325 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
32974228 |
cgcaactgttcaccatgtttctcatgaaacccataac |
32974264 |
T |
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