View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13437_high_13 (Length: 214)
Name: NF13437_high_13
Description: NF13437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13437_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 12 - 197
Target Start/End: Complemental strand, 16961721 - 16961536
Alignment:
| Q |
12 |
agcagcacagatttctgcaacattgaacctactccatatttaacactagtgtgctatgaagaaaatgttacacagttgcatgttgttggaaacaacaatg |
111 |
Q |
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| T |
16961721 |
agcaccacagatttctgcaacattgaacctactccatatttaacactagtgtgctatgaagaaaatgttacacagttgcatgttgttggaaacaccaatg |
16961622 |
T |
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| Q |
112 |
agtttacttcattgcctcaaaatttcaactcatacacactcttttcaacactttccactttatcaagcttgaaagtactctctttg |
197 |
Q |
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| T |
16961621 |
agttcacctcattgcctcaaaatttcaactcatacacactcttttcaacactttccactttatcaagcttgaaagtactctctttg |
16961536 |
T |
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