View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13437_high_8 (Length: 288)
Name: NF13437_high_8
Description: NF13437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13437_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 10 - 270
Target Start/End: Original strand, 8036309 - 8036569
Alignment:
| Q |
10 |
catcatcattaccaaattgtcaagttacattgtccaagacaactaaaacacttgtgcttgatacatctccaaattgaagaaaatatatgataagaaaatc |
109 |
Q |
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| T |
8036309 |
catcaccattaccaaattgtcaagttacattgtccaagacaactaaaacacttatgcttgatacatctccaaattgaagaaaatatatgataagaaaatc |
8036408 |
T |
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| Q |
110 |
gggggataattatttctccttgttctccgtccaaaagtagatttgcagttgcaaacaatgatcttccctcaatcaggggatactccaactattttcttgt |
209 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
8036409 |
gggggataattaattctccttgttctccgtccaaaagtagatttgcagttgcaaacaatgatcttcccacaatcaggggatactccaactattttcttgt |
8036508 |
T |
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| Q |
210 |
ttttgtattcacaatgccaatgaagaaatcgaatcattataaattgatgggtaaatcatag |
270 |
Q |
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| T |
8036509 |
ttttgctttcacaatgccaatgaagaaatcgaatcatcataaattgatgggtaaatcatag |
8036569 |
T |
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