View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13437_low_10 (Length: 227)
Name: NF13437_low_10
Description: NF13437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13437_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 39280914 - 39281105
Alignment:
| Q |
19 |
tctccaccatctagagcataacttgcctccctccttcattcttccacactcttccttataacatgcaactaagaccttaaaccatatactcgatgtctcg |
118 |
Q |
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| T |
39280914 |
tctccaacatctagagcataacttgcctccctccttcattcttccaccctcttccttataacatgcaactaagaccttaaaccatatactcgatgtctcg |
39281013 |
T |
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| Q |
119 |
accacttctcttgcaacctccagtaccactttcctaatgataatctcatattaaactctttaatcccctgaatccccaaacaccatttcttc |
210 |
Q |
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|||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39281014 |
accactcctcttgcaacctccggtaccactttcctaatgacaatctcatattaaactctttaatcccctgaatccccaaacaccatttcttc |
39281105 |
T |
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