View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13438_high_9 (Length: 284)
Name: NF13438_high_9
Description: NF13438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13438_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 266
Target Start/End: Complemental strand, 3880410 - 3880160
Alignment:
| Q |
19 |
atcccaggaatgaaaagaaacctaatctctcacagatacaacagccagaaaagttgagacattatcccaaggatcatctaccgctaaacactgatagtaa |
118 |
Q |
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| T |
3880410 |
atcccaggaatgaaaagaaacctaatctctcacagatacaacagccagaaaagttgagacattatcccaaggatcatctaccgctaaacactgatagtaa |
3880311 |
T |
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| Q |
119 |
caactaataatgattcatgcaattatttcaactaaagtcacaaatttcagtaattctttaaactgattttgtgagaataccaagaataccctttcataaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3880310 |
caactaataatgattcatgcaattatttcaactaaagtcacaaatttcagtagttctttaaactgattttgtgagaataccaagaataccctttcataaa |
3880211 |
T |
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| Q |
219 |
cttcatcaatatgacatac---aaaagtacatcagtattataaaaatcaca |
266 |
Q |
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| T |
3880210 |
cttcatcaatatgacatacaaaaaaagtacatcagtattataaaaatcaca |
3880160 |
T |
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