View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1343_high_130 (Length: 251)

Name: NF1343_high_130
Description: NF1343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1343_high_130
NF1343_high_130
[»] chr3 (61 HSPs)
chr3 (13-231)||(4557299-4557530)
chr3 (13-231)||(4016038-4016269)
chr3 (13-150)||(30682684-30682821)
chr3 (13-222)||(53631767-53631989)
chr3 (20-243)||(41936995-41937220)
chr3 (24-231)||(42758248-42758468)
chr3 (13-144)||(19111598-19111728)
chr3 (13-231)||(34119521-34119750)
chr3 (13-155)||(31126878-31127020)
chr3 (13-150)||(48390905-48391042)
chr3 (24-222)||(54317018-54317229)
chr3 (13-238)||(830872-831109)
chr3 (13-137)||(22535942-22536067)
chr3 (20-211)||(49579933-49580137)
chr3 (20-231)||(44953429-44953654)
chr3 (13-216)||(29842170-29842386)
chr3 (13-211)||(34025816-34026027)
chr3 (13-219)||(43582440-43582659)
chr3 (13-137)||(10823794-10823919)
chr3 (20-211)||(44172495-44172699)
chr3 (20-211)||(44179195-44179399)
chr3 (10-211)||(49025540-49025753)
chr3 (13-150)||(6738482-6738620)
chr3 (21-150)||(20086879-20087009)
chr3 (20-219)||(52572478-52572691)
chr3 (13-113)||(34154280-34154381)
chr3 (20-209)||(39728540-39728742)
chr3 (22-137)||(17146251-17146367)
chr3 (20-150)||(44106880-44107011)
chr3 (21-154)||(23580698-23580831)
chr3 (10-204)||(44639134-44639340)
chr3 (20-215)||(52198023-52198232)
chr3 (20-137)||(39655374-39655492)
chr3 (20-137)||(44252616-44252734)
chr3 (7-122)||(48306652-48306768)
chr3 (20-121)||(7469895-7469997)
chr3 (20-215)||(29284205-29284413)
chr3 (57-211)||(23154080-23154245)
chr3 (153-238)||(23546929-23547015)
chr3 (20-137)||(23547073-23547191)
chr3 (97-150)||(23910332-23910385)
chr3 (13-89)||(55438829-55438905)
chr3 (53-126)||(1772534-1772607)
chr3 (153-197)||(7469807-7469851)
chr3 (13-113)||(14208264-14208363)
chr3 (164-211)||(48390832-48390879)
chr3 (158-231)||(19111754-19111828)
chr3 (13-57)||(1722821-1722865)
chr3 (13-73)||(55225250-55225310)
chr3 (34-73)||(16841446-16841485)
chr3 (153-219)||(22535847-22535914)
chr3 (47-126)||(23330038-23330117)
chr3 (164-211)||(39655288-39655335)
chr3 (157-216)||(40796147-40796206)
chr3 (153-219)||(48305647-48305714)
chr3 (153-211)||(34154429-34154487)
chr3 (153-211)||(44252762-44252820)
chr3 (53-126)||(2487675-2487748)
chr3 (53-126)||(40796272-40796345)
chr3 (175-211)||(30616296-30616332)
chr3 (178-225)||(35687491-35687539)
[»] chr1 (61 HSPs)
chr1 (13-231)||(35936823-35937042)
chr1 (13-150)||(49741095-49741232)
chr1 (13-231)||(9982884-9983115)
chr1 (12-222)||(16433170-16433387)
chr1 (13-231)||(44615469-44615701)
chr1 (13-231)||(44792868-44793100)
chr1 (13-231)||(29871279-29871510)
chr1 (24-215)||(34673293-34673496)
chr1 (13-231)||(42707831-42708056)
chr1 (13-211)||(5180908-5181113)
chr1 (13-208)||(50426679-50426881)
chr1 (13-211)||(17134810-17135021)
chr1 (13-211)||(45866200-45866411)
chr1 (13-215)||(12494874-12495088)
chr1 (7-122)||(44632252-44632367)
chr1 (13-211)||(18354095-18354306)
chr1 (13-150)||(40087551-40087689)
chr1 (13-150)||(17092047-17092185)
chr1 (13-215)||(19572523-19572737)
chr1 (20-211)||(29936286-29936490)
chr1 (28-211)||(24710736-24710921)
chr1 (13-137)||(34060121-34060245)
chr1 (13-231)||(39616166-39616387)
chr1 (13-211)||(3628000-3628213)
chr1 (20-215)||(42439681-42439889)
chr1 (13-137)||(23966735-23966860)
chr1 (27-119)||(16408823-16408916)
chr1 (20-211)||(36187235-36187439)
chr1 (20-215)||(51421728-51421936)
chr1 (21-150)||(24236849-24236979)
chr1 (20-122)||(28297803-28297906)
chr1 (59-151)||(2514677-2514770)
chr1 (20-215)||(34610943-34611151)
chr1 (21-109)||(13020559-13020648)
chr1 (20-150)||(49250861-49250992)
chr1 (20-137)||(20774502-20774620)
chr1 (91-150)||(13390355-13390414)
chr1 (153-219)||(28297950-28298017)
chr1 (153-211)||(16237319-16237377)
chr1 (153-211)||(23490786-23490844)
chr1 (177-231)||(10778561-10778616)
chr1 (7-102)||(34524138-34524233)
chr1 (14-88)||(8679684-8679758)
chr1 (52-126)||(16237439-16237513)
chr1 (153-207)||(16408958-16409012)
chr1 (153-222)||(23058482-23058552)
chr1 (153-211)||(24236776-24236834)
chr1 (153-215)||(48125694-48125756)
chr1 (56-129)||(10450191-10450264)
chr1 (53-126)||(19892856-19892929)
chr1 (179-231)||(33293525-33293578)
chr1 (53-122)||(38733895-38733964)
chr1 (169-231)||(13798270-13798333)
chr1 (153-219)||(34060031-34060098)
chr1 (153-231)||(35069883-35069962)
chr1 (165-219)||(49250779-49250834)
chr1 (56-126)||(12718900-12718970)
chr1 (153-215)||(34085251-34085313)
chr1 (57-126)||(19003789-19003858)
chr1 (59-119)||(36616796-36616856)
chr1 (178-210)||(44632157-44632189)
[»] chr6 (46 HSPs)
chr6 (13-150)||(14032419-14032556)
chr6 (13-211)||(14505949-14506159)
chr6 (13-146)||(24602948-24603081)
chr6 (13-231)||(12678088-12678318)
chr6 (13-150)||(14254821-14254958)
chr6 (13-137)||(30816120-30816244)
chr6 (13-145)||(7393980-7394112)
chr6 (13-117)||(14245110-14245214)
chr6 (13-117)||(14410954-14411058)
chr6 (20-211)||(10142533-10142737)
chr6 (20-211)||(2367195-2367399)
chr6 (20-211)||(32853713-32853917)
chr6 (47-215)||(11762342-11762522)
chr6 (10-150)||(12309438-12309572)
chr6 (22-211)||(24225569-24225771)
chr6 (13-219)||(27534546-27534766)
chr6 (45-211)||(27738666-27738845)
chr6 (20-211)||(5863398-5863602)
chr6 (20-137)||(10188174-10188292)
chr6 (20-150)||(12141254-12141385)
chr6 (153-222)||(14410858-14410928)
chr6 (10-84)||(32532423-32532497)
chr6 (20-150)||(3484011-3484142)
chr6 (153-215)||(9442445-9442507)
chr6 (153-211)||(32532555-32532613)
chr6 (152-211)||(20349078-20349137)
chr6 (152-225)||(18908907-18908981)
chr6 (157-238)||(32053107-32053189)
chr6 (153-231)||(28079690-28079769)
chr6 (153-211)||(3483938-3483996)
chr6 (154-216)||(20610992-20611054)
chr6 (57-126)||(29200020-29200089)
chr6 (21-82)||(32052927-32052988)
chr6 (93-137)||(32053031-32053075)
chr6 (157-231)||(256486-256561)
chr6 (153-204)||(12141400-12141451)
chr6 (153-211)||(15498339-15498397)
chr6 (169-211)||(30986284-30986326)
chr6 (93-126)||(9458240-9458273)
chr6 (57-126)||(9458549-9458618)
chr6 (53-126)||(18908774-18908847)
chr6 (178-211)||(29199900-29199933)
chr6 (153-222)||(30816275-30816343)
chr6 (179-215)||(7978597-7978633)
chr6 (152-231)||(9458677-9458757)
chr6 (151-211)||(9458871-9458931)
[»] chr4 (67 HSPs)
chr4 (13-211)||(1724326-1724536)
chr4 (13-225)||(37107280-37107504)
chr4 (13-231)||(19534324-19534555)
chr4 (13-231)||(26564700-26564931)
chr4 (13-129)||(6482146-6482262)
chr4 (13-139)||(425692-425818)
chr4 (20-225)||(12825462-12825680)
chr4 (13-150)||(37348992-37349129)
chr4 (13-150)||(7985210-7985348)
chr4 (13-150)||(9230152-9230288)
chr4 (13-137)||(42774629-42774754)
chr4 (13-149)||(39188384-39188519)
chr4 (13-150)||(13770544-13770681)
chr4 (20-211)||(11027947-11028152)
chr4 (13-211)||(31752324-31752535)
chr4 (13-137)||(48459349-48459474)
chr4 (20-219)||(47550360-47550573)
chr4 (20-238)||(5902602-5902834)
chr4 (20-251)||(32585363-32585608)
chr4 (13-211)||(32596200-32596410)
chr4 (13-150)||(39046821-39046958)
chr4 (13-215)||(47239397-47239612)
chr4 (13-137)||(42299659-42299784)
chr4 (20-216)||(43893103-43893312)
chr4 (20-137)||(31918661-31918779)
chr4 (24-113)||(29755456-29755545)
chr4 (19-150)||(21423735-21423867)
chr4 (24-136)||(28695245-28695357)
chr4 (20-122)||(6382390-6382493)
chr4 (20-137)||(44317409-44317527)
chr4 (25-118)||(39375160-39375253)
chr4 (20-211)||(7608845-7609049)
chr4 (25-107)||(15987372-15987455)
chr4 (20-210)||(11122886-11123089)
chr4 (13-132)||(4766419-4766540)
chr4 (57-137)||(55826726-55826807)
chr4 (53-146)||(13015344-13015443)
chr4 (153-210)||(6382289-6382346)
chr4 (13-84)||(53906437-53906508)
chr4 (153-211)||(44317556-44317614)
chr4 (53-126)||(18423476-18423549)
chr4 (10-62)||(13015550-13015602)
chr4 (152-215)||(9929179-9929242)
chr4 (153-219)||(15987269-15987336)
chr4 (168-211)||(39375314-39375357)
chr4 (153-215)||(3737797-3737859)
chr4 (153-215)||(21544600-21544662)
chr4 (153-215)||(25941159-25941221)
chr4 (153-211)||(29527833-29527891)
chr4 (177-215)||(43309528-43309566)
chr4 (153-211)||(48459502-48459560)
chr4 (153-211)||(55826639-55826697)
chr4 (53-126)||(15733654-15733727)
chr4 (53-126)||(24637080-24637153)
chr4 (152-219)||(15733533-15733601)
chr4 (54-126)||(41915121-41915193)
chr4 (91-126)||(1866684-1866719)
chr4 (153-231)||(14605920-14605999)
chr4 (47-126)||(29527693-29527772)
chr4 (153-215)||(1866561-1866623)
chr4 (153-211)||(10302105-10302163)
chr4 (153-207)||(47103759-47103813)
chr4 (53-122)||(568303-568372)
chr4 (153-225)||(4741217-4741290)
chr4 (53-126)||(11172855-11172928)
chr4 (93-126)||(16216789-16216822)
chr4 (157-197)||(21423886-21423926)
[»] chr7 (84 HSPs)
chr7 (13-225)||(5376953-5377178)
chr7 (24-251)||(27850300-27850540)
chr7 (10-211)||(18825887-18826100)
chr7 (13-223)||(16078881-16079104)
chr7 (13-211)||(12980244-12980455)
chr7 (28-222)||(26622834-26623041)
chr7 (20-215)||(45379980-45380189)
chr7 (20-150)||(46127271-46127398)
chr7 (13-150)||(2630661-2630799)
chr7 (24-211)||(3920417-3920616)
chr7 (13-208)||(24425249-24425455)
chr7 (35-222)||(26004477-26004675)
chr7 (13-144)||(37579130-37579261)
chr7 (20-216)||(24753050-24753247)
chr7 (13-150)||(41741537-41741675)
chr7 (13-150)||(17885332-17885470)
chr7 (20-150)||(25782995-25783125)
chr7 (13-122)||(37182142-37182252)
chr7 (20-137)||(38139894-38140012)
chr7 (13-122)||(44986015-44986124)
chr7 (13-137)||(39316862-39316987)
chr7 (20-204)||(30650505-30650702)
chr7 (13-211)||(39456030-39456239)
chr7 (12-150)||(23328476-23328615)
chr7 (24-110)||(5916194-5916280)
chr7 (13-215)||(44734368-44734583)
chr7 (10-137)||(37196099-37196227)
chr7 (20-219)||(45885771-45885984)
chr7 (20-211)||(7779882-7780086)
chr7 (20-215)||(18125239-18125447)
chr7 (20-231)||(21702533-21702758)
chr7 (20-137)||(35074343-35074461)
chr7 (20-243)||(45708847-45709081)
chr7 (20-151)||(44794114-44794246)
chr7 (20-211)||(16866043-16866247)
chr7 (28-150)||(25905510-25905633)
chr7 (13-84)||(26004675-26004746)
chr7 (10-238)||(41103517-41103762)
chr7 (21-137)||(25980018-25980135)
chr7 (13-113)||(43507300-43507401)
chr7 (20-137)||(17851728-17851846)
chr7 (57-122)||(44658565-44658631)
chr7 (13-84)||(3227698-3227769)
chr7 (60-150)||(16811644-16811735)
chr7 (153-211)||(10072486-10072544)
chr7 (152-231)||(27063157-27063237)
chr7 (152-231)||(30839128-30839208)
chr7 (20-150)||(38152776-38152892)
chr7 (153-211)||(3226961-3227019)
chr7 (153-215)||(32546212-32546274)
chr7 (53-126)||(37103262-37103335)
chr7 (14-82)||(10072357-10072425)
chr7 (153-211)||(3157103-3157161)
chr7 (91-137)||(3227047-3227093)
chr7 (52-126)||(29015093-29015167)
chr7 (153-211)||(35074490-35074548)
chr7 (153-207)||(38139811-38139865)
chr7 (53-126)||(28309378-28309451)
chr7 (153-221)||(33841098-33841167)
chr7 (165-225)||(39317027-39317088)
chr7 (179-231)||(42908035-42908088)
chr7 (164-231)||(37182305-37182373)
chr7 (91-126)||(21750709-21750744)
chr7 (152-215)||(21750801-21750864)
chr7 (152-238)||(25782895-25782981)
chr7 (152-211)||(27063353-27063412)
chr7 (183-225)||(29014952-29014995)
chr7 (91-126)||(31425931-31425966)
chr7 (12-86)||(26874232-26874306)
chr7 (153-211)||(31426028-31426086)
chr7 (169-215)||(37103138-37103184)
chr7 (153-211)||(38152907-38152965)
chr7 (23-104)||(17120543-17120624)
chr7 (166-211)||(17885498-17885543)
chr7 (178-211)||(18684019-18684052)
chr7 (179-231)||(22973434-22973487)
chr7 (53-126)||(27062399-27062472)
chr7 (158-211)||(43507470-43507523)
chr7 (179-211)||(10990876-10990908)
chr7 (178-225)||(10995834-10995882)
chr7 (153-197)||(17851874-17851918)
chr7 (152-204)||(25905648-25905699)
chr7 (152-208)||(28309511-28309567)
chr7 (164-231)||(41741444-41741512)
[»] scaffold0036 (1 HSPs)
scaffold0036 (13-231)||(33256-33487)
[»] chr5 (63 HSPs)
chr5 (13-155)||(2412810-2412952)
chr5 (13-149)||(3573087-3573223)
chr5 (13-139)||(2985010-2985136)
chr5 (13-139)||(12447244-12447370)
chr5 (13-146)||(27088445-27088577)
chr5 (13-202)||(35194014-35194215)
chr5 (13-211)||(4582981-4583192)
chr5 (13-150)||(30115346-30115483)
chr5 (13-150)||(17853381-17853518)
chr5 (7-211)||(20973512-20973718)
chr5 (13-150)||(33862273-33862409)
chr5 (13-150)||(28045517-28045656)
chr5 (24-150)||(38006558-38006684)
chr5 (13-150)||(1218619-1218755)
chr5 (13-210)||(15890069-15890278)
chr5 (21-150)||(18206888-18207019)
chr5 (13-150)||(35311685-35311822)
chr5 (13-137)||(3564830-3564954)
chr5 (10-211)||(4920685-4920899)
chr5 (13-137)||(29246053-29246178)
chr5 (22-150)||(42717721-42717849)
chr5 (12-214)||(8453386-8453599)
chr5 (13-138)||(6156019-6156145)
chr5 (20-219)||(5908695-5908908)
chr5 (13-150)||(13402092-13402229)
chr5 (20-137)||(40517675-40517793)
chr5 (13-219)||(12866558-12866779)
chr5 (20-216)||(22694912-22695121)
chr5 (20-231)||(30996466-30996690)
chr5 (13-150)||(12834663-12834802)
chr5 (20-150)||(42987568-42987699)
chr5 (30-150)||(6092607-6092728)
chr5 (13-137)||(27302837-27302959)
chr5 (21-219)||(6369566-6369777)
chr5 (75-129)||(33420440-33420494)
chr5 (91-155)||(15564577-15564641)
chr5 (153-231)||(28569016-28569095)
chr5 (152-211)||(33728017-33728076)
chr5 (57-126)||(20634065-20634134)
chr5 (57-126)||(20650179-20650248)
chr5 (57-126)||(34259145-34259214)
chr5 (20-84)||(10126977-10127041)
chr5 (153-207)||(38006489-38006543)
chr5 (153-215)||(38972937-38972999)
chr5 (57-126)||(2681101-2681170)
chr5 (154-222)||(2985163-2985232)
chr5 (53-126)||(12915353-12915426)
chr5 (153-210)||(35311837-35311894)
chr5 (164-215)||(27900413-27900464)
chr5 (157-219)||(29245958-29246021)
chr5 (56-126)||(12250855-12250925)
chr5 (177-226)||(12773821-12773871)
chr5 (153-215)||(13402016-13402078)
chr5 (153-211)||(23045007-23045065)
chr5 (153-222)||(34259270-34259340)
chr5 (153-203)||(40517821-40517871)
chr5 (153-225)||(6810173-6810246)
chr5 (153-210)||(10822543-10822600)
chr5 (177-225)||(12712558-12712607)
chr5 (53-126)||(23045126-23045199)
chr5 (154-211)||(27302751-27302808)
chr5 (158-215)||(28045675-28045732)
chr5 (158-225)||(18207038-18207106)
[»] chr2 (50 HSPs)
chr2 (13-144)||(31942280-31942411)
chr2 (13-211)||(37106562-37106766)
chr2 (13-150)||(14540649-14540782)
chr2 (13-150)||(19104929-19105066)
chr2 (13-204)||(16226759-16226952)
chr2 (20-150)||(6027977-6028108)
chr2 (13-150)||(12193915-12194053)
chr2 (20-219)||(13705367-13705580)
chr2 (13-150)||(45256686-45256824)
chr2 (20-247)||(37999353-37999594)
chr2 (20-219)||(45115428-45115641)
chr2 (20-137)||(42798090-42798208)
chr2 (13-113)||(37472854-37472955)
chr2 (20-151)||(13830606-13830738)
chr2 (20-150)||(10920515-10920646)
chr2 (21-211)||(7314663-7314866)
chr2 (13-150)||(44746197-44746335)
chr2 (13-137)||(36128208-36128333)
chr2 (20-216)||(8915947-8916156)
chr2 (13-175)||(18106152-18106316)
chr2 (20-150)||(10208518-10208649)
chr2 (20-211)||(24414147-24414351)
chr2 (20-137)||(30846815-30846933)
chr2 (20-150)||(9632256-9632387)
chr2 (13-70)||(37319805-37319862)
chr2 (53-126)||(38342653-38342726)
chr2 (153-211)||(30846962-30847020)
chr2 (53-126)||(30978806-30978879)
chr2 (153-216)||(36128116-36128179)
chr2 (164-211)||(37472774-37472821)
chr2 (152-222)||(43371568-43371639)
chr2 (153-215)||(3547182-3547244)
chr2 (157-215)||(25210397-25210455)
chr2 (53-126)||(26755633-26755707)
chr2 (153-222)||(38342522-38342592)
chr2 (52-126)||(42576492-42576566)
chr2 (153-238)||(42797981-42798061)
chr2 (153-225)||(45256839-45256912)
chr2 (159-215)||(12193838-12193894)
chr2 (152-215)||(22900809-22900872)
chr2 (153-211)||(6027904-6027962)
chr2 (153-211)||(9632402-9632460)
chr2 (153-222)||(35248388-35248458)
chr2 (53-126)||(4427805-4427878)
chr2 (53-126)||(6164613-6164686)
chr2 (153-237)||(14331543-14331628)
chr2 (178-211)||(15546785-15546818)
chr2 (53-126)||(24051751-24051824)
chr2 (153-209)||(13830752-13830807)
chr2 (167-211)||(14540811-14540855)
[»] chr8 (48 HSPs)
chr8 (13-231)||(1012480-1012712)
chr8 (13-150)||(24568802-24568938)
chr8 (19-215)||(43113637-43113845)
chr8 (13-150)||(34139310-34139448)
chr8 (13-120)||(35215367-35215474)
chr8 (13-211)||(17469118-17469328)
chr8 (20-231)||(20399461-20399686)
chr8 (13-219)||(45235927-45236147)
chr8 (20-219)||(24870030-24870242)
chr8 (20-211)||(27932282-27932486)
chr8 (13-215)||(29108833-29109048)
chr8 (121-231)||(35215519-35215629)
chr8 (13-211)||(17220579-17220785)
chr8 (13-215)||(1063369-1063584)
chr8 (13-150)||(36132005-36132141)
chr8 (20-211)||(4230745-4230938)
chr8 (20-150)||(2075922-2076053)
chr8 (13-121)||(39445685-39445793)
chr8 (13-113)||(29089573-29089672)
chr8 (10-150)||(34021338-34021476)
chr8 (13-150)||(28977202-28977340)
chr8 (20-122)||(32302929-32303032)
chr8 (30-137)||(34776945-34777053)
chr8 (31-215)||(14186205-14186397)
chr8 (21-150)||(24927819-24927949)
chr8 (13-150)||(11255096-11255230)
chr8 (20-84)||(40248502-40248566)
chr8 (152-231)||(37960956-37961036)
chr8 (152-215)||(39445587-39445650)
chr8 (53-126)||(4594270-4594343)
chr8 (153-211)||(32303076-32303134)
chr8 (153-195)||(2075873-2075915)
chr8 (164-238)||(11254996-11255070)
chr8 (153-215)||(30481432-30481494)
chr8 (153-211)||(40248386-40248444)
chr8 (179-231)||(15173874-15173927)
chr8 (153-197)||(24927964-24928008)
chr8 (20-84)||(31325134-31325197)
chr8 (172-215)||(5858663-5858706)
chr8 (153-223)||(8545351-8545422)
chr8 (92-126)||(2189982-2190016)
chr8 (56-126)||(8031023-8031093)
chr8 (177-211)||(9642366-9642400)
chr8 (152-237)||(17084095-17084181)
chr8 (153-215)||(24568953-24569015)
chr8 (177-215)||(27056566-27056604)
chr8 (157-225)||(34021495-34021564)
chr8 (53-126)||(40789469-40789542)
[»] scaffold0022 (1 HSPs)
scaffold0022 (20-238)||(90467-90698)
[»] scaffold0007 (1 HSPs)
scaffold0007 (20-150)||(197415-197545)
[»] scaffold0027 (1 HSPs)
scaffold0027 (13-144)||(6269-6400)
[»] scaffold0294 (1 HSPs)
scaffold0294 (13-155)||(14638-14780)
[»] scaffold0135 (1 HSPs)
scaffold0135 (13-150)||(36018-36154)
[»] scaffold0189 (2 HSPs)
scaffold0189 (13-137)||(4119-4244)
scaffold0189 (170-215)||(4290-4335)
[»] scaffold0097 (1 HSPs)
scaffold0097 (13-144)||(33446-33581)
[»] scaffold0014 (1 HSPs)
scaffold0014 (13-88)||(14295-14370)
[»] scaffold0519 (2 HSPs)
scaffold0519 (13-150)||(10163-10297)
scaffold0519 (160-238)||(10319-10397)
[»] scaffold0902 (1 HSPs)
scaffold0902 (12-101)||(747-836)
[»] scaffold0182 (1 HSPs)
scaffold0182 (152-215)||(16981-17044)
[»] scaffold0095 (1 HSPs)
scaffold0095 (13-84)||(32685-32755)
[»] scaffold0059 (1 HSPs)
scaffold0059 (157-215)||(70114-70172)
[»] scaffold0184 (1 HSPs)
scaffold0184 (153-231)||(2984-3063)
[»] scaffold0005 (1 HSPs)
scaffold0005 (153-231)||(211379-211458)
[»] scaffold1630 (1 HSPs)
scaffold1630 (20-73)||(1492-1545)
[»] scaffold0015 (1 HSPs)
scaffold0015 (53-126)||(56032-56105)
[»] scaffold0244 (1 HSPs)
scaffold0244 (153-225)||(4582-4654)


Alignment Details
Target: chr3 (Bit Score: 123; Significance: 3e-63; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 4557530 - 4557299
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  4557530 aatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaataaca 4557431  T
Q  113 tgacatatcattataaagtaattttctgcattcgggaca------------agttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    ||||||||||  ||||||||||||||||||||||||| |             |||||||||| |||||||||||||||||||||||||||||||| | ||    
T  4557430 tgacatatcaacataaagtaattttctgcattcgggatagatttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgtt 4557331  T
Q  201 ttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    |||||| | |||||||| ||||| || |||||    
T  4557330 ttgaaaacggggaaaacccaaacccataccca 4557299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 4016269 - 4016038
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  4016269 aatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcgatagtagtttttataacacatcaattatcaaacaaaataaca 4016170  T
Q  113 tgacatatcattataaagtaattttctgcattcgggacaa------------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    ||||||||||  |||| ||| ||||||||||||||||| |            |||||| ||| |||||||||||| ||||| ||||||||||||| | ||    
T  4016169 tgacatatcaacataaggtagttttctgcattcgggacgagtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgtt 4016070  T
Q  201 ttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    |||||||| |||||||| ||||| || |||||    
T  4016069 ttgaaatcggggaaaacccaaacccataccca 4016038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 30682684 - 30682821
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||  || |||||||||||||||||||    
T  30682684 aatatgttcactttaacatttgttagaacgaatgatttaattgctcctttaaatatcaatgatagtttttataacatgaccattatcaaacaaaataaca 30682783  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||  ||||||||||||||| ||||| ||||    
T  30682784 tgacatatcaacataaagtaattttctacattcaggac 30682821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 53631767 - 53631989
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  53631767 aatatgctcactttatcatttgttagaccgatcgatttagttgctcctttaaatatcaatggtagtttttataacacggcaattatcaaacaaaataaca 53631866  T
Q  113 tgacatatcattataaagtaattttctgcattcgggacaa------------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    || |||||||  |||||||||||||||  ||||||||| |            |||||||||| |||||||||||| ||||||||||| ||||| ||| ||    
T  53631867 tggcatatcaacataaagtaattttctagattcgggacgagtttgagtatgggttcggggtgggtacctatatacccgttacccgtctcatacacgtgtt 53631966  T
Q  201 ttgaaa-tcgggaaaactcaaac 222  Q
    || ||| | ||||||||||||||    
T  53631967 ttaaaatttgggaaaactcaaac 53631989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 243
Target Start/End: Complemental strand, 41937220 - 41936995
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacata 119  Q
    |||||||||||||||||||||||||||||||| ||| || ||| |||||||||| |||| |||||||||| |||||||||||||||||||| |||||||     
T  41937220 tcactttaacatttgttagaccgattgatttagttgttcatttcaatatcaatgttagtctttataacacgacaattatcaaacaaaataatatgacatg 41937121  T
Q  120 tcattataaagtaattttctgcattcgggacaagttcggg-gtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaact 217  Q
    |||  | |||||| ||||||||||| | ||| |||| |||  || ||| |||||||| ||||| ||||| ||||| ||| |||| ||||| ||||||||     
T  41937120 tcaacacaaagtagttttctgcatttgagacgagtttgggtatgagtatctatatacccgttatccgtctcatactcgtgttttaaaatcggggaaaacc 41937021  T
Q  218 caaactcaaacccagtcaaaaggagg 243  Q
    || ||||||||||| |||||| ||||    
T  41937020 catactcaaacccaatcaaaacgagg 41936995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 231
Target Start/End: Original strand, 42758248 - 42758468
Alignment:
Q  24 tttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcat 123  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||| |||||||     
T  42758248 tttaacatttgttagaccggttgatttaattgctcctttaaatatcaatgatagtttttataacatggcaattatcaaacaaaataacatggcatatcaa 42758347  T
Q  124 tataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gg 210  Q
     ||||||||||||||| | ||||||||              ||||||||||  |||||||||||  ||||||||||||||||| || |||||||||| ||    
T  42758348 cataaagtaattttcttcgttcgggacgggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcggg 42758447  T
Q  211 gaaaactcaaactcaaaccca 231  Q
    | |||| |||||||| |||||    
T  42758448 ggaaacccaaactcataccca 42758468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 19111598 - 19111728
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||||||||||||||||| ||| ||||||||| || |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  19111598 aatatgatcactttaacatttgttataccaattgatttagttactcctttaaatatcaatggtagtttttataacacgaaaattatcaaacaaaataaca 19111697  T
Q  113 tgacatatcattataaagtaattttctgcatt 144  Q
    |||||||| |  ||||||||||||||| ||||    
T  19111698 tgacatat-aacataaagtaattttctacatt 19111728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 34119521 - 34119750
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||||||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| |||||||||||||||||||  |    
T  34119521 aatatgctcactttaacatttgttagaccgattgatttagttgctcatttcaatatcaatgttagtttttataacacgacaattatcaaacaaaata--a 34119618  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    || |||||||  | |||||| ||||||||||| |||||              |||||||||| ||||||||||||  |||| ||||| ||||||||| ||    
T  34119619 tggcatatcaacacaaagtagttttctgcatttgggacggatttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgtt 34119718  T
Q  201 ttgaaatcggg-aaaactcaaactcaaaccca 231  Q
    || |||||||| |||||||||||||| |||||    
T  34119719 ttaaaatcgggaaaaactcaaactcataccca 34119750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 31127020 - 31126878
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||    
T  31127020 aatatgctcactttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttagtttttataatacgacaattatcaaacaaaataaca 31126921  T
Q  113 tgacatatcattataaagtaattttctgcattcgggacaagtt 155  Q
    || |||||||  | || ||| ||||||||||| ||||| ||||    
T  31126920 tggcatatcaacacaatgtagttttctgcatttgggacgagtt 31126878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 48391042 - 48390905
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||| |||||||||||||| || ||||||| ||| || ||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  48391042 aatatgttcacttcaacatttgttagacggaatgatttagttgatcttttaaatatcaatggtagtttttttaacatgacaattatcaaacaaaataaca 48390943  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||  ||||||||||||| | | ||||||||    
T  48390942 tgacatatcaacataaagtaattttttacgttcgggac 48390905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 222
Target Start/End: Original strand, 54317018 - 54317229
Alignment:
Q  24 tttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcat 123  Q
    |||||||||||||||||   |||||||| |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||| |||||||     
T  54317018 tttaacatttgttagacatgttgatttagttgctcctttaaatatcaatagtagtttttataacacggcaattatcaaacaaaataacatggcatatcaa 54317117  T
Q  124 tataaagtaattttctgcattcgggac---------aa---gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gg 210  Q
     ||||||||||||||| | || |||||         ||   |||||||||| |||||||||||| |||||||||||| ||||  || |||||||||| ||    
T  54317118 cataaagtaattttcttcgtttgggacgggtttgggaatgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatcggg 54317217  T
Q  211 gaaaactcaaac 222  Q
    ||||||||||||    
T  54317218 gaaaactcaaac 54317229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 830872 - 831109
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||| ||||||||| ||||||| ||||||||| || |||||| ||||||||||| |||||||||||| ||  |||||||||||||||||||||    
T  830872 aatatgctcacgttaacattttttagaccaattgatttagtttctccttaaaatatcaatgatagtttttataagacggcaattatcaaacaaaataaca 830971  T
Q  113 tgacatatcattataaagtaattttctgcattcgggacaa------------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    |  ||||| |  |||||||||||||||||||||||||| |            |||| ||||| ||||| |||||||||||| ||||| ||||||||| ||    
T  830972 tagcatattaacataaagtaattttctgcattcgggacgaatttgggtatgggttcagggtgggtacc-atatactcgttatccgtctcatacccgtgtt 831070  T
Q  201 ttgaaatcgggaaa-actcaaactcaaacccagtcaaaa 238  Q
    |||||| ||||||| || || || |||||||||||||||    
T  831071 ttgaaaacgggaaatacccatacccaaacccagtcaaaa 831109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 22536067 - 22535942
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  22536067 aatatgctcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 22535968  T
Q  112 atgacatatcattataaagtaatttt 137  Q
    |||||||||||  ||||| |||||||    
T  22535967 atgacatatcaacataaaataatttt 22535942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 49579933 - 49580137
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||| ||||||||||||||||| ||||    
T  49579933 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaatcatcaaacaaaataacataacat 49580032  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    |||| |||||||||||||| | |||| |||||              ||||| |||| |||||||||||||||||||||||||||||||||| |||||| |    
T  49580033 atcaatataaagtaattttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgaga 49580132  T
Q  207 tcggg 211  Q
    |||||    
T  49580133 tcggg 49580137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 231
Target Start/End: Complemental strand, 44953654 - 44953429
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  44953654 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 44953555  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  |||||||| |||| | |||| |||||             ||||||||||| |||||||||||| ||||||||||||||||||||| |||||| |    
T  44953554 atcaacataaagtagttttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgaga 44953455  T
Q  207 tc-gggaaaactcaaactcaaaccca 231  Q
    || |||||||| || || ||||||||    
T  44953454 tcggggaaaacccatacccaaaccca 44953429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 216
Target Start/End: Original strand, 29842170 - 29842386
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||| ||||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  29842170 aatatgctcacttcaacatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 29842269  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    |||||| ||||  ||||||||||||| | |||| | |||              |||||||||| |||||||||| | ||||||| ||||||||||||| |    
T  29842270 atgacaaatcaacataaagtaattttttacatttgagacgggtatgagtatgggttcggggtgggtacctatattcccgttaccagtcccatacccgtgt 29842369  T
Q  200 tttgaaatcgggaaaac 216  Q
    ||| |||||||||||||    
T  29842370 tttaaaatcgggaaaac 29842386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 34025816 - 34026027
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| || |||||||||||| ||||  || ||||||| ||| |||||||||||||||||||| |||||| |||||  |||||||||||||||||||||    
T  34025816 aatatgctccctttaacatttgatagatggaatgatttagttgatcctttaaatatcaatggtaatttttattaacatgacaattatcaaacaaaataac 34025915  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    |||||||||||  ||||| ||||||| | |||| |||||             |||||||||||   ||||||||||||||||||||||||||||| || |    
T  34025916 atgacatatcaacataaaataattttttacatttgggacgggtatgggtatgagttcggggtggaaacctatatactcgttacccgtcccatacctgtgt 34026015  T
Q  200 tttgaaatcggg 211  Q
    ||||||||||||    
T  34026016 tttgaaatcggg 34026027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 43582440 - 43582659
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttata-acacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||||||||||||  | ||||||| ||| ||| ||||||||||||||||||||||||  |||  | |||||||||||||||||||    
T  43582440 aatatgctcactttaacatttgttagacgtaatgatttagttgatccgttaaatatcaatggtagtttttatttacatgataattatcaaacaaaataac 43582539  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac-------aa-----gttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    ||||||||||| |||||||||||||| | |||| |||||       ||     ||||||| || ||||||| |||| ||||||||||| ||||||||| |    
T  43582540 atgacatatcaatataaagtaattttttacatttgggacgggtatgaatatgggttcggg-tgggtacctacatacacgttacccgtctcatacccgtgt 43582638  T
Q  200 tttgaaatc-gggaaaactca 219  Q
    ||||||||| |||||||||||    
T  43582639 tttgaaatcggggaaaactca 43582659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 10823919 - 10823794
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||| ||||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  10823919 aataagttcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 10823820  T
Q  112 atgacatatcattataaagtaatttt 137  Q
    || ||||||||  |||||||||||||    
T  10823819 ataacatatcaacataaagtaatttt 10823794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 44172495 - 44172699
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| |||||||||||||| |||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  44172495 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcagtggtagtttttattaacatgacaattatcaaacaaaataacataacat 44172594  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||||||||||| | |||| |||||              |||||||||| |||| ||||||| ||||||||||||||||||||| |||||| |    
T  44172595 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgaga 44172694  T
Q  207 tcggg 211  Q
    |||||    
T  44172695 tcggg 44172699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 44179195 - 44179399
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| |||||||||||||| |||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  44179195 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcagtggtagtttttattaacatgacaattatcaaacaaaataacataacat 44179294  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||||||||||| | |||| |||||              |||||||||| |||| ||||||| ||||||||||||||||||||| |||||| |    
T  44179295 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgaga 44179394  T
Q  207 tcggg 211  Q
    |||||    
T  44179395 tcggg 44179399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 211
Target Start/End: Original strand, 49025540 - 49025753
Alignment:
Q  10 aataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaat 108  Q
    ||||||| | ||||||| |||||| ||||||  | ||||||| ||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  49025540 aataataagctcactttcacatttattagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacataacaattatcaaacaaaat 49025639  T
Q  109 aacatgacatatcattataaagtaattttctgcattcgggacaagttcg-----------gggtgtgtacctatatactcgttacccgtcccatacccgt 197  Q
    ||||| ||||||||  | ||||||||||| | |||| |||||  ||| |           || |||||||||||||||  ||||||||||||||||||||    
T  49025640 aacataacatatcaacacaaagtaattttttacatttgggacgggtttgggtatgggttcggatgtgtacctatatacctgttacccgtcccatacccgt 49025739  T
Q  198 attttgaaatcggg 211  Q
     |||||| ||||||    
T  49025740 gttttgagatcggg 49025753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 6738620 - 6738482
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||| ||||||||  | ||||||||||| |||||  |||||||||||||||||||| |||||   ||||||||||||||||||||    
T  6738620 aatatgctcactttaacatctgttagacataatgatttaattgatccttccaatatcaatggtagtttttattaacatggcaattatcaaacaaaataac 6738521  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    |||||||||||  ||||||||||||| | |||| |||||    
T  6738520 atgacatatcaacataaagtaattttttacatttgggac 6738482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 20086879 - 20087009
Alignment:
Q  21 cactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacata 119  Q
    |||||||||||||||||||  || ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||| |||||||||||||||||    
T  20086879 cactttaacatttgttagatggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaagcaaaataacatgacata 20086978  T
Q  120 tcattataaagtaattttctgcattcgggac 150  Q
    |||  ||||| ||||||| | |||| |||||    
T  20086979 tcaacataaaataattttttacatttgggac 20087009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 52572478 - 52572691
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| | ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  52572478 tcactttcacatttgttagacaaaatgatttagttgatactttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 52572577  T
Q  119 atcattataaagtaattttctgcattcgggacaag------------ttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    || |  ||||||||||||| | |||| |||||  |            ||||||||| || ||||||||| ||||||||||||||||||||| |||||| |    
T  52572578 attaacataaagtaattttttacatttgggacgggcttgagtatggattcggggtgggtccctatatacccgttacccgtcccatacccgtgttttgaga 52572677  T
Q  207 tcg-ggaaaactca 219  Q
    ||| ||||||||||    
T  52572678 tcgaggaaaactca 52572691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 34154280 - 34154381
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||||||||| |||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  34154280 aatatgttcactttaatatttgttagacataatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 34154379  T
Q  112 at 113  Q
    ||    
T  34154380 at 34154381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 39728540 - 39728742
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||  || |||||||||||||| |||||||||| |||| |||||||||||||||||||||||| ||||    
T  39728540 tcactttcacatttgttagacaaaatgatttagttaatcttttaaatatcaatgatagtttttattaacagaacaattatcaaacaaaataacattacat 39728639  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||||||||||| | |||| |||||              |||||||||| |||| ||||||| |||||||| ||||||||||||||||||| |    
T  39728640 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttgaga 39728739  T
Q  207 tcg 209  Q
    |||    
T  39728740 tcg 39728742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 17146367 - 17146251
Alignment:
Q  22 actttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacatat 120  Q
    ||||| |||||||||||||  | ||||||| ||| ||||||||||||||||| |||||||||| ||||  ||||||||||||||||||||||| ||||||    
T  17146367 actttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatat 17146268  T
Q  121 cattataaagtaatttt 137  Q
    ||  |||||||||||||    
T  17146267 caacataaagtaatttt 17146251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 44107011 - 44106880
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||| ||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  44107011 tcactttcacatttgtaagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 44106912  T
Q  119 atcattataaagtaattttctgcattcgggac 150  Q
    || |  ||||||||||||| | |||| |||||    
T  44106911 attaacataaagtaattttttacatttgggac 44106880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 23580698 - 23580831
Alignment:
Q  21 cactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacata 119  Q
    ||||||||||||||||| || || ||||||| ||| |||||||||||||||| |||||||||| |||||  ||||||||||||||||||||||| |||||    
T  23580698 cactttaacatttgttatacggaatgatttagttgatcctttaaatatcaatagtagtttttattaacatgacaattatcaaacaaaataacat-acata 23580796  T
Q  120 tcattataaagtaattttctgcattcgggacaagt 154  Q
    |||  ||||| ||||||| | |||| |||| ||||    
T  23580797 tcaacataaaataattttttacatttgggataagt 23580831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 44639134 - 44639340
Alignment:
Q  10 aataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaat 108  Q
    |||||||  |||||||| ||||||||||||   || |||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||    
T  44639134 aataataaattcactttcacatttgttagataaat-gatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaat 44639232  T
Q  109 aacatgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccg 196  Q
    ||||| ||||||||  ||||| ||||||| | |||| || ||              |||||||||| |||||||||||| ||||||||||||||||||||    
T  44639233 aacataacatatcaacataaaataattttttacatttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccg 44639332  T
Q  197 tattttga 204  Q
    | ||||||    
T  44639333 tgttttga 44639340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 215
Target Start/End: Original strand, 52198023 - 52198232
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaat-aacatgaca 117  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||  ||    
T  52198023 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataaacatagca 52198122  T
Q  118 tatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaa 205  Q
    |||||   |||||||||||| | |||| || ||              |||||||||| |||||||||||| |||||||||||||||||| || ||||||     
T  52198123 tatcaacgtaaagtaattttttacatttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttgag 52198222  T
Q  206 atcgggaaaa 215  Q
    ||||||||||    
T  52198223 atcgggaaaa 52198232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 39655492 - 39655374
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| ||||||||||||   | | ||||| ||| |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  39655492 tcactttcacatttgttagagaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 39655393  T
Q  119 atcattataaagtaatttt 137  Q
    ||||  |||||||| ||||    
T  39655392 atcaacataaagtagtttt 39655374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 44252616 - 44252734
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||| ||||    
T  44252616 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacat 44252715  T
Q  119 atcattataaagtaatttt 137  Q
    ||||  |||||||| ||||    
T  44252716 atcaacataaagtagtttt 44252734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 48306768 - 48306652
Alignment:
Q  7 tcgaataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaa 105  Q
    ||||| |||| | ||||||||| ||||||||||| || ||||||| ||| | ||||||||||||||| ||||||||| |||||  |||||||||||||||    
T  48306768 tcgaacaatacgctcactttaatatttgttagacggaatgatttagttgatactttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 48306669  T
Q  106 aataacatgacatatca 122  Q
    | |||||||||| ||||    
T  48306668 attaacatgacaaatca 48306652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 7469997 - 7469895
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||| ||||    
T  7469997 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatcaaacaaaataacataacat 7469898  T
Q  119 atc 121  Q
    |||    
T  7469897 atc 7469895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 215
Target Start/End: Original strand, 29284205 - 29284413
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||| ||  | | ||||| ||| || ||||||||| ||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  29284205 tcactttcacatttgttaaacaaaattatttagttgatcttttaaatattaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 29284304  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  |||||||| |||| | |||  |||||              ||||||| || |||||||||||| ||||||||||||||||||||| ||| || |    
T  29284305 atcaacataaagtagttttttacatctgggacgggtttgggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 29284404  T
Q  207 tcgggaaaa 215  Q
    |||||||||    
T  29284405 tcgggaaaa 29284413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 211
Target Start/End: Complemental strand, 23154245 - 23154080
Alignment:
Q  57 tcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacatatcattataaagtaattttctgcattcgggaca---- 151  Q
    ||||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||| ||||||||  ||||||||||||| | |||| |||| |        
T  23154245 tcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagtaattttttacatttgggataggta 23154147  T
Q  152 --------agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
             |||||| ||| ||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  23154146 tgagtatgggttcggagtgggtacctatatactcgttacccgttccatacccgt-gtttgaaatcggg 23154080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 23547015 - 23546929
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactcaaacccagtcaaaa 238  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| ||| || ||| |||||||| || || |||||||||||||||    
T  23547015 gttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccaaacccagtcaaaa 23546929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 23547191 - 23547073
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||| ||  | | ||||| ||| |||||||||||| |||| |||||||||| ||||  ||||||||||||||||||||||| ||||    
T  23547191 tcactttcacatttgttaaacaaaattatttagttgatcctttaaatataaatgctagtttttattaacatgacaattatcaaacaaaataacataacat 23547092  T
Q  119 atcattataaagtaatttt 137  Q
    || |  |||||||| ||||    
T  23547091 attaacataaagtagtttt 23547073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 23910385 - 23910332
Alignment:
Q  97 atcaaacaaaataacatgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  23910385 atcaaacaaaataacatgacatatcaacataaagtaattttctacattcgggac 23910332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 55438905 - 55438829
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacac 89  Q
    |||||||| | |||||||||||||| | ||||||||||| ||||||||  ||||||| ||||||||||| |||||||    
T  55438905 aatatgtttattttaacatttgttaaagcgattgatttagttgctcctccaaatatcgatggtagttttaataacac 55438829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 1772607 - 1772534
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| |||||||   |||| ||||| ||  | ||||||||||||||||||||||||||||||||||    
T  1772607 ttgctcctttaagtatcaataaaagttcttatatcatgataattatcaaacaaaataacatgacatatcattat 1772534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 7469851 - 7469807
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgt 197  Q
    |||||||||| |||||||||||| |||||||||||||||||||||    
T  7469851 gttcggggtgggtacctatatacccgttacccgtcccatacccgt 7469807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 14208264 - 14208363
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||||||||  | ||| || ||||||  |||||||||||||||||||||  | |||||||||||  ||||||||||||| ||||||||    
T  14208264 aatattttcattttaacatttccttgactgaatgattttgttgctcctttaaatatcaatgaca-tttttataacatgacaattatcaaaccaaataaca 14208362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 48390879 - 48390832
Alignment:
Q  164 gtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||    
T  48390879 gtacctatattcccgttacccgtcccatacccgtgttttgaaatcggg 48390832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 19111754 - 19111828
Alignment:
Q  158 gggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg-aaaactcaaactcaaaccca 231  Q
    ||||| |||| ||||||| ||||| || |||| ||||||| ||||||||||||| |||||||||||||| |||||    
T  19111754 gggtgggtacttatatacccgttatccatcccgtacccgtgttttgaaatcgggaaaaactcaaactcataccca 19111828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 1722821 - 1722865
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgct 57  Q
    |||||||||| |||||||||||||||| |||||||||| ||||||    
T  1722821 aatatgttcattttaacatttgttagatcgattgatttgattgct 1722865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 55225310 - 55225250
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatg 73  Q
    ||||||||||||||||||||| ||  | ||| |||||||||||||| |||| |||||||||    
T  55225310 aatatgttcactttaacatttttttaatcgaatgatttaattgctcttttatatatcaatg 55225250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 16841485 - 16841446
Alignment:
Q  34 gttagaccgattgatttaattgctcctttaaatatcaatg 73  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  16841485 gttagaccgattgatttaattgcacctttgaatatcaatg 16841446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 22535914 - 22535847
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa-tcgggaaaactca 219  Q
    |||||||||| || ||| ||||| |||||||||||||||| |||| |||||||| | |||||||||||    
T  22535914 gttcggggtgggtgcctgtatacccgttacccgtcccatatccgtgttttgaaattggggaaaactca 22535847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 23330038 - 23330117
Alignment:
Q  47 atttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||| |||||| ||||| |||||||   |||| ||||| ||  |||||||||||||  |||||||||||||||||||||    
T  23330038 atttagttgctcgtttaactatcaataaaagttcttatatcatgacaattatcaaaccgaataacatgacatatcattat 23330117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 39655335 - 39655288
Alignment:
Q  164 gtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||||||||  |||||||||||||||||||| |||||| ||||||    
T  39655335 gtacctatatacctgttacccgtcccatacccgtgttttgagatcggg 39655288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 40796206 - 40796147
Alignment:
Q  157 ggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaac 216  Q
    |||||| |||| | ||| ||| ||||||||||| |||||||||||||||||||| |||||    
T  40796206 ggggtgggtacatgtatcctcattacccgtcccgtacccgtattttgaaatcggaaaaac 40796147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 48305714 - 48305647
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa-tcgggaaaactca 219  Q
    |||||||||| |||||||||||| || ||| ||| |||||||||| |||||||| | |||||||||||    
T  48305714 gttcggggtgggtacctatatacccgatactcgttccatacccgtgttttgaaattggggaaaactca 48305647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 34154429 - 34154487
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||||||||| || |||||||||  ||||||| | |||||||||||||    
T  34154429 gttcggggtgggtacctatattcttgttacccgtttcatacccatgttttgaaatcggg 34154487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 44252762 - 44252820
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| ||||||||||||  ||||| |||||||||||||| ||| || ||||||    
T  44252762 gttcggggtgggtacctatatacctgttacacgtcccatacccgtgtttcgagatcggg 44252820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 2487675 - 2487748
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||  ||  |||| ||||| ||  ||||||||||||| |||||||||| |||||||||||    
T  2487675 ttgctcctttaactatccgtgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatcattat 2487748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 40796345 - 40796272
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||  ||  |||| ||||| ||  ||||||||||||| |||||||| |||||||||||||    
T  40796345 ttgctcctttaactatccgtgaaagttcttatatcatgacaattatcaaaccaaataacaggacatatcattat 40796272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 30616332 - 30616296
Alignment:
Q  175 ctcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||||||||||| |||| |||||||||||||    
T  30616332 ctcgttacccgtcccatatccgtgttttgaaatcggg 30616296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 35687539 - 35687491
Alignment:
Q  178 gttacccgtcccatacccgtattttgaaatcggg-aaaactcaaactca 225  Q
    |||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  35687539 gttacccgtctcgtacccgtattatgaaatcggggaaaactcaaactca 35687491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 35937042 - 35936823
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  35937042 aatatgctcactttaacatttgttagaccaattgatttagttgctcctttaaatatcaatggtagtttttgtaacacggaaattatcaaacaaaataaca 35936943  T
Q  113 tgacatatcattataaagtaattttctgcattcgggacaagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-ggg 211  Q
    ||||||||||  ||||||||||||||| |||||  |||  ||| |||||| |||||||||||| ||||| ||||||||||| |||  ||||||||| |||    
T  35936942 tgacatatcaacataaagtaattttctacattcatgacgggtttggggtgggtacctatatacccgttatccgtcccatactcgtgatttgaaatcgggg 35936843  T
Q  212 aaaactcaaactcaaaccca 231  Q
    ||||| |||||||| |||||    
T  35936842 aaaacccaaactcataccca 35936823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 49741232 - 49741095
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  49741232 aatatgttcactttaacatttgttaaaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaataaca 49741133  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    | |||||| |  |||||||| |||||||||||||||||    
T  49741132 taacatattaacataaagtagttttctgcattcgggac 49741095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 9983115 - 9982884
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||  | ||||||||||||||||||||    
T  9983115 aatatgctcactttaacatttgttagaccgattaatttagttgctcctttgaatatcaatggtagttttgataacatgagaattatcaaacaaaataaca 9983016  T
Q  113 tgacatatcattataaagtaattttctgcattcggg------------acaagttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    ||| |||| |  ||||||||||||||||||||||||            |   |||||||||| ||||||||||||||||||||| |||||| ||||| ||    
T  9983015 tgatatattaacataaagtaattttctgcattcgggatgggtttgggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgtt 9982916  T
Q  201 ttgaaa-tcgggaaaactcaaactcaaaccca 231  Q
    |||||| | ||||||| ||||||||| |||||    
T  9982915 ttgaaattggggaaaattcaaactcataccca 9982884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 222
Target Start/End: Complemental strand, 16433387 - 16433170
Alignment:
Q  12 taatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataac 111  Q
    ||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    |||||||||||||||||||||    
T  16433387 taatatgctcactttaatatttgttagaccaattgatttagttgctcctttaaatatcaatggtagtttttataa---tacaattatcaaacaaaataac 16433291  T
Q  112 atgacatatcattataaagtaattttctgcattcgggacaagttcggg---------gtgtgtacctatatactcgttacccgtcccatacccgtatttt 202  Q
    |||||||||||  |||||||||||||||||||| |||    ||| |||         | | |||||||||||  ||||||||||||||||||||| ||||    
T  16433290 atgacatatcaacataaagtaattttctgcatttggggtgggtttgggtatgggttcgggggtacctatatatccgttacccgtcccatacccgtgtttt 16433191  T
Q  203 gaaatcgg-gaaaactcaaac 222  Q
    |||||||| ||||||||||||    
T  16433190 gaaatcggagaaaactcaaac 16433170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 44615701 - 44615469
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  44615701 aatatgttcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaataatagtttttataacacgacaattatcaaacaaaataaca 44615602  T
Q  113 tgacatatcattataaagta-attttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    || |||||||  ||||||||  |||| || ||| |||||             |||| |||||| ||||||||||||  |||||||||||||||||||| |    
T  44615601 tggcatatcaagataaagtagtttttttggatttgggacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgt 44615502  T
Q  200 tttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    ||| ||||| |||||||| |||||||| |||||    
T  44615501 ttttaaatcagggaaaacccaaactcataccca 44615469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 44792868 - 44793100
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  44792868 aatatgttcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaataatagtttttataacacgacaattatcaaacaaaataaca 44792967  T
Q  113 tgacatatcattataaagta-attttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    || |||||||  ||||||||  |||| || ||| |||||             |||| |||||| ||||||||||||  |||||||||||||||||||| |    
T  44792968 tggcatatcaagataaagtagtttttttggatttgggacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgt 44793067  T
Q  200 tttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    ||| ||||| |||||||| |||||||| |||||    
T  44793068 ttttaaatcagggaaaacccaaactcataccca 44793100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 29871510 - 29871279
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||    
T  29871510 aatatgctcattttaatatttgttagaccgattgatgtagttgctcctttaaatatcaatggtagtttttataacatgggaattatcaaacaaaataaca 29871411  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    ||||||||||  ||||| ||||||||| ||||||||||             ||||| ||||| ||||||||||||  |||||| ||||||||||| | ||    
T  29871410 tgacatatcaacataaaataattttctacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgtt 29871311  T
Q  201 ttgaaatcgg-gaaaactcaaactcaaaccca 231  Q
    |||||||||| |||||| |||||||| |||||    
T  29871310 ttgaaatcggagaaaacccaaactcataccca 29871279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 34673496 - 34673293
Alignment:
Q  24 tttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcat 123  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||     
T  34673496 tttaacatttgttagaccggttgatttagttgctcctttaaatatcaatggtagtttttataacacggcaattatcaaacaaaataacatggcatatcaa 34673397  T
Q  124 tataaagtaattttctgcattcgggaca------------agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
     |||||||| |||||| | ||||| |||             |||||||||| |||||||||||| ||||||| ||| ||||||||| ||||||||| |||    
T  34673396 cataaagtagttttcttcgttcggaacaggtttgggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaattggg 34673297  T
Q  212 aaaa 215  Q
    ||||    
T  34673296 aaaa 34673293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 42708056 - 42707831
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||| |||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  42708056 aatatgctcactttaacatctgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 42707957  T
Q  112 atgacatatcattataaagtaattttctgcattcgggacaagt-----tcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    |||||||||||  ||||| ||||||| | |||| |||||  ||     |  ||||| |||| ||||| | ||||||||||||||||||||| ||||||||    
T  42707956 atgacatatcaacataaaataattttttacatttgggacgggtatgggttcgggtgagtacttatattcccgttacccgtcccatacccgtgttttgaaa 42707857  T
Q  207 tcgg-gaaaactcaaactcaaaccca 231  Q
    |||| ||||||||| ||||| |||||    
T  42707856 tcggagaaaactcatactcataccca 42707831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 5180908 - 5181113
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||| |||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  5180908 aatatgctcactttaaaatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 5181007  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaa 205  Q
    |||||||||||  ||||| ||||||| | |||| || ||        ||| |||||| || ||||||||| |||||||||||||||||||||||||||||    
T  5181008 atgacatatcaacataaaataattttttacatttggaacgggtatgggtttggggtgggtgcctatatacccgttacccgtcccatacccgtattttgaa 5181107  T
Q  206 atcggg 211  Q
    ||||||    
T  5181108 atcggg 5181113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 208
Target Start/End: Complemental strand, 50426881 - 50426679
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||||||| |||| || ||||||| ||| ||||||||||||||||| ||||||||| |||||  |||||||||||||||||||||    
T  50426881 aatatgctcactttaacatttgtaagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataac 50426782  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaa 205  Q
    |||||||||||  ||||||||| ||| | |||| |||||        |||||||||| |||||||||||| ||||| ||||| ||||||||| |||||||    
T  50426781 atgacatatcaacataaagtaaatttttacatttgggacgggtatgggttcggggtgggtacctatatacccgttatccgtctcatacccgtgttttgaa 50426682  T
Q  206 atc 208  Q
    |||    
T  50426681 atc 50426679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 17134810 - 17135021
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    ||||||||||||||||||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  17134810 aatatgttcactttaacatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 17134909  T
Q  112 atgacatatcattataaagtaattttctgcattcgggacaa------------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    |||||||||||  ||||||||||||| | |||  ||||| |            ||||||||   |||||||||||| ||||||||||| ||||||||| |    
T  17134910 atgacatatcaacataaagtaattttttacatatgggacgagtatgggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgt 17135009  T
Q  200 tttgaaatcggg 211  Q
    ||||||||||||    
T  17135010 tttgaaatcggg 17135021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 211
Target Start/End: Complemental strand, 45866411 - 45866200
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  | |||||||||||||||||||    
T  45866411 aatatgttcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaaaataac 45866312  T
Q  112 atgacatatcattataaagtaattttctgcattcggg------------acaagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    |||||||||||  ||||||||||||| | |||| |||            |  |||| |||||| |||||||||||||| ||||| ||| ||||||||| |    
T  45866311 atgacatatcaacataaagtaattttttacatttgggatgggtatgggtatgagtttggggtgggtacctatatactcattacctgtctcatacccgtgt 45866212  T
Q  200 tttgaaatcggg 211  Q
    ||||||||||||    
T  45866211 tttgaaatcggg 45866200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 215
Target Start/End: Original strand, 12494874 - 12495088
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||||||  ||||||| |||||||||||||    
T  12494874 aatatgttcactttaacatttgttagaccgataaatttagttgctcctttaaatatcagtggtagtttttataacacgccaattataaaacaaaataaca 12494973  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    || ||| |||  ||| |||| |||||| |||| |||||              ||||| |||| |||||||||||| |||||| ||||||||| |||| ||    
T  12494974 tgtcatgtcaacatatagtagttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgtt 12495073  T
Q  201 ttgaaatcgggaaaa 215  Q
    |||||||||||||||    
T  12495074 ttgaaatcgggaaaa 12495088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 44632367 - 44632252
Alignment:
Q  7 tcgaataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaa 106  Q
    ||||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  44632367 tcgaacaatatgatcactttaacatttgttagacctattgatttagttgctcctttaaatatcaatgatagtttttataacacgacaattgtcaaacaaa 44632268  T
Q  107 ataacatgacatatca 122  Q
    |||| ||| |||||||    
T  44632267 ataatatggcatatca 44632252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 211
Target Start/End: Complemental strand, 18354306 - 18354095
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||||||||||||||| ||||| || ||||||| ||| || |||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  18354306 aatatgttcactttaacatttgatagacggaatgatttagttgatcttttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 18354207  T
Q  112 atgacatatcattataaagtaattttctgcattcgggacaa------------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    |||||||||||  ||||| ||||||| | |||| ||||| |            |||||||||| | || ||||||| ||||||||||||||||||| | |    
T  18354206 atgacatatcaacataaaataattttttacatttgggacgagtatgggtatcggttcggggtgggaacttatatacccgttacccgtcccatacccatgt 18354107  T
Q  200 tttgaaatcggg 211  Q
    ||||||||||||    
T  18354106 tttgaaatcggg 18354095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 40087689 - 40087551
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  40087689 aatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 40087590  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    |||| ||||||  ||||||||||||| | |||| |||||    
T  40087589 atgatatatcaacataaagtaattttttacatttgggac 40087551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 17092185 - 17092047
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    ||||||||||||||||||||| |||||  || ||||||| ||| ||||||||||||||||| ||||||||| |||||  |||||||||||||||||||||    
T  17092185 aatatgttcactttaacatttattagatggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataac 17092086  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    |||||||||||  ||||||||||||| | |||| |||||    
T  17092085 atgacatatcaacataaagtaattttttacatttgggac 17092047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 19572737 - 19572523
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||||||||||||  | ||||||||||| ||||| || ||||||||||||||||||| ||||   ||||||||||||||||||||    
T  19572737 aatatgctcactttaacatttgttagacgtaatgatttaattgatccttcaa-tatcaatggtagtttttattaacatggcaattatcaaacaaaataac 19572639  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    |||||||||||  ||||| ||||||| | |||| |||||              |||||||||| |||||||||||| ||||||| ||||||||||||| |    
T  19572638 atgacatatcaacataaaataattttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgt 19572539  T
Q  200 tttgaaatcgggaaaa 215  Q
    ||||||||||||||||    
T  19572538 tttgaaatcgggaaaa 19572523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 29936286 - 29936490
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||| ||| |||||||||| ||||    
T  29936286 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattataaaaaaaaataacattacat 29936385  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||||||||||| | |||| |||||              |||||||||| |||||||||||| |||||||||||||||||||||||||||| |    
T  29936386 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaga 29936485  T
Q  207 tcggg 211  Q
    |||||    
T  29936486 tcggg 29936490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 211
Target Start/End: Original strand, 24710736 - 24710921
Alignment:
Q  28 acatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||||  | ||||||| ||| ||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||| |  |||||  ||    
T  24710736 acatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataatgtatcaacat 24710835  T
Q  127 aaagtaattttctgcattcgggacaagttcg-gggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||||||| | |||| |||||  ||| | |  || |||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  24710836 aaagtaattttttacatttgggacgggtttgagtatgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggg 24710921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 34060245 - 34060121
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||| ||||||| |||||  |||||||||||||||||||||    
T  34060245 aatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggttgtttttattaacatgacaattatcaaacaaaataac 34060146  T
Q  112 atgacatatcattataaagtaatttt 137  Q
    || ||||||||  |||||||||||||    
T  34060145 at-acatatcaacataaagtaatttt 34060121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 39616166 - 39616387
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||| |||||||| || |||||||| || || ||||||||||||||||| |||||| |||||  | ||||| |||||||||||||    
T  39616166 aatatgctcactttaacatctgttagacggaatgatttaactgatcatttaaatatcaatggtaatttttattaacatgataattagcaaacaaaataac 39616265  T
Q  112 atgacatatcattataaagtaattttctgcattcgggacaagt-tcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaat-cg 209  Q
    |||||||||||  ||||| ||||||| | |||| |||||  || | ||  || || |||||||||| ||||||||||| |||||||| |||||||||  |    
T  39616266 atgacatatcaacataaaataattttttacatttgggacgggtatgggtatgggtgcctatatacttgttacccgtcctatacccgtgttttgaaatagg 39616365  T
Q  210 ggaaaactcaaactcaaaccca 231  Q
    ||||||| || ||||| |||||    
T  39616366 ggaaaacccatactcataccca 39616387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 211
Target Start/End: Complemental strand, 3628213 - 3628000
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||||||||||||  | ||||||| ||| ||| |||||||| |||||||||||||| |||||  | |||||||||||||||||||    
T  3628213 aatatgctcactttaacatttgttagacgtaatgatttagttgatccgttaaatattaatggtagtttttattaacatgataattatcaaacaaaataac 3628114  T
Q  112 atgacatatcattataaagtaa--ttttctgcattcgggac---aa---------gttcggggtgtgtacctatatactcgttacccgtcccatacccgt 197  Q
    |||||||||||  |||||||||  |||| | |||| |||||   ||         |||||||||| ||||||| |||| |||||||||||||||||||||    
T  3628113 atgacatatcaacataaagtaattttttttacatttgggactggaatgagtatgggttcggggtgggtacctacatacccgttacccgtcccatacccgt 3628014  T
Q  198 attttgaaatcggg 211  Q
     |||||||||||||    
T  3628013 gttttgaaatcggg 3628000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 215
Target Start/End: Complemental strand, 42439889 - 42439681
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    |||||||||||||||||||||  | ||||||| ||| ||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||| ||||    
T  42439889 tcactttaacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacat 42439790  T
Q  119 atcattataaagtaattttctgcattcgggacaa------------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||||||||||| | |||| ||||  |            |||||||||| |||||||||||| |||||| |||||||||||| | |||||| |    
T  42439789 atcaacataaagtaattttttacatttgggatgagtttggatatgggttcggggtgggtacctatatacccgttactcgtcccatacccatgttttgaga 42439690  T
Q  207 tcgggaaaa 215  Q
    |||| ||||    
T  42439689 tcggaaaaa 42439681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 23966735 - 23966860
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||||||||  || ||||||| ||| | |||||||||||||| ||||||||||| ||||  |||||||||||||||||||||    
T  23966735 aatatgctcactttaacatttgttagatggaatgatttagttgatactttaaatatcaatagtagtttttataaacatgacaattatcaaacaaaataac 23966834  T
Q  112 atgacatatcattataaagtaatttt 137  Q
    || ||||||||  |||||||||||||    
T  23966835 ataacatatcaacataaagtaatttt 23966860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 16408823 - 16408916
Alignment:
Q  27 aacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacata 119  Q
    |||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  16408823 aacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacata 16408916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 36187439 - 36187235
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| || |||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  36187439 tcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 36187340  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||| ||| ||| | |||| |||||              |||| ||||| |||||||||||| ||||||||||||||||||||| |||||| |    
T  36187339 atcaacataaaataactttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgaga 36187240  T
Q  207 tcggg 211  Q
    |||||    
T  36187239 tcggg 36187235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 215
Target Start/End: Original strand, 51421728 - 51421936
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||| ||||||||||||||| |||||   |||||||||||||||||||||| ||||    
T  51421728 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatagcaatggtagtttttattaacatggcaattatcaaacaaaataacataacat 51421827  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||| ||||||||| | |||| |||||              |||||||||| |||| |||||||  |||||||||||||||||||| |||||| |    
T  51421828 atcaacatagagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgaga 51421927  T
Q  207 tcgggaaaa 215  Q
    |||||||||    
T  51421928 tcgggaaaa 51421936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 24236979 - 24236849
Alignment:
Q  21 cactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacata 119  Q
    |||||| |||||||||||||  | ||||||| ||| ||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||| |||||    
T  24236979 cactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacata 24236880  T
Q  120 tcattataaagtaattttctgcattcgggac 150  Q
    |||  ||||| ||||||| | |||| |||||    
T  24236879 tcaacataaaataattttttacatttgggac 24236849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 28297803 - 28297906
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  28297803 tcactttcacatttgttagacaaaataatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 28297902  T
Q  119 atca 122  Q
    ||||    
T  28297903 atca 28297906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 2514677 - 2514770
Alignment:
Q  59 ctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacat-atcattataaagtaattttctgcattcgggaca 151  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||  |||  ||||| ||||||| |||||||||||||    
T  2514677 ctttaaatatcaatggtagtttttattacacggcaattatcaaacaaaataacatgacatgttcaacataaaataattttatgcattcgggaca 2514770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 215
Target Start/End: Original strand, 34610943 - 34611151
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| || |||||||||||||||||||||||| |||||  |||||||||||||||||||| || ||||    
T  34610943 tcactttcacatttgttagacaaaattatttagttgatcttttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataatataacat 34611042  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  |||||||| | || | |||| |||||              |||||||||| |||||||||||| ||||||  ||||||||||||| |||||| |    
T  34611043 atcaacataaagtagtattttacatttgggacgggtttgggtatgggttcggggtgagtacctatatacacgttacatgtcccatacccgtgttttgaga 34611142  T
Q  207 tcgggaaaa 215  Q
    |||||||||    
T  34611143 tcgggaaaa 34611151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 13020559 - 13020648
Alignment:
Q  21 cactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaata 109  Q
    |||||||| ||||||||||| || ||||||| ||| | ||||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  13020559 cactttaatatttgttagacggaatgatttagttgatactttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaata 13020648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 49250992 - 49250861
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| || |||||||||||||| |||||||||| ||||  ||||||||||||||||||| ||| ||||    
T  49250992 tcactttcacatttgttagacaaaataatttagttgatcttttaaatatcaatgatagtttttatcaacatgacaattatcaaacaaaatagcataacat 49250893  T
Q  119 atcattataaagtaattttctgcattcgggac 150  Q
    ||||  |||||||| |||| | |||| |||||    
T  49250892 atcaacataaagtagttttttacatttgggac 49250861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 20774502 - 20774620
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||   ||||||||| ||||  ||||||||||||||||||||||| ||||    
T  20774502 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaataaaagtttttattaacatgacaattatcaaacaaaataacataacat 20774601  T
Q  119 atcattataaagtaatttt 137  Q
    ||||  |||||||| ||||    
T  20774602 atcaacataaagtagtttt 20774620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 13390355 - 13390414
Alignment:
Q  91 acaattatcaaacaaaataacatgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| | |||| |||||    
T  13390355 acaattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggac 13390414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 28297950 - 28298017
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactca 219  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| ||| || ||| |||||||||||    
T  28297950 gttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactca 28298017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 16237377 - 16237319
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||  |||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  16237377 gttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggg 16237319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 23490844 - 23490786
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| ||| || ||||||    
T  23490844 gttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggg 23490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 10778616 - 10778561
Alignment:
Q  177 cgttacccgtcccatacccgtattttgaaatcggg-aaaactcaaactcaaaccca 231  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||    
T  10778616 cgttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaactcataccca 10778561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 34524233 - 34524138
Alignment:
Q  7 tcgaataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaa 102  Q
    |||||||||||||||||||||||||||  | |  ||| |||||| ||| ||||||||||||||||||  | | ||||||| |  ||||||||||||    
T  34524233 tcgaataatatgttcactttaacatttcattgctcgactgatttgatttctcctttaaatatcaatgaaattatttataagatgacaattatcaaa 34524138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 8679758 - 8679684
Alignment:
Q  14 atatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataaca 88  Q
    |||| |||||||||||||||  | |||  | |||||| |||||||||||||||||||||| || |||||||||||    
T  8679758 atatattcactttaacatttccttgactaaatgatttgattgctcctttaaatatcaatgataatttttataaca 8679684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 16237513 - 16237439
Alignment:
Q  52 attgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||||| ||||||||  | ||  |||| ||  ||||||||||||| ||||||||||||||||||||||    
T  16237513 attgctcctttaactatcaatgaaaattcctatatcatgacaattatcaaaccaaataacatgacatatcattat 16237439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 16408958 - 16409012
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaat 207  Q
    |||||||||  ||||||||||||  |||||||||||||||||||| |||||||||    
T  16408958 gttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaat 16409012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 23058482 - 23058552
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgg-gaaaactcaaac 222  Q
    |||||||||| |||||||||| | ||||||||||| | ||| || ||||||||||||| ||||||||||||    
T  23058482 gttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaac 23058552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 24236834 - 24236776
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||||||||||| |||| ||||| |||||||||| |||||| ||||||    
T  24236834 gttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagatcggg 24236776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 48125756 - 48125694
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||||||||||  ||||||||| ||||||||||||||| ||||||| |||| ||||| ||||||    
T  48125756 gttcggggtggatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcaggaaaa 48125694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 10450264 - 10450191
Alignment:
Q  56 ctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattataaa 129  Q
    ||||||||| |||||||   |||| ||||| ||  |||||||| |||| |||||||||||||||||||||||||    
T  10450264 ctcctttaactatcaataaaagttcttatatcatgacaattattaaaccaaataacatgacatatcattataaa 10450191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 19892856 - 19892929
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||||||  | || ||||| ||  ||||||||||||| |||||| |||||||||||||||    
T  19892856 ttgctcctttaattatcaatgaaatttcttatatcatgacaattatcaaaccaaataagatgacatatcattat 19892929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 33293578 - 33293525
Alignment:
Q  179 ttacccgtcccatacccgtattttgaaatcggg-aaaactcaaactcaaaccca 231  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||    
T  33293578 ttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcataccca 33293525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 38733895 - 38733964
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatca 122  Q
    ||||| |||||||||||||||  | |||||||||||  ||||||||||||| |||||||||  |||||||    
T  38733895 ttgcttctttaaatatcaatgacaatttttataacatgacaattatcaaaccaaataacatagcatatca 38733964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 13798270 - 13798333
Alignment:
Q  169 tatatactcgttacccgtcccatacccgtattttgaaatcggg-aaaactcaaactcaaaccca 231  Q
    ||||| |||||||||| || ||||||||| ||||||||||||| ||||| |||||||| |||||    
T  13798270 tatatcctcgttacccatctcatacccgtgttttgaaatcgggaaaaacccaaactcataccca 13798333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 34060098 - 34060031
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcg-ggaaaactca 219  Q
    |||||| ||| ||||||||||||  |||| ||||| ||||||||| ||||||||||| ||||||||||    
T  34060098 gttcggagtgggtacctatatacctgttatccgtctcatacccgtgttttgaaatcgaggaaaactca 34060031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 35069962 - 35069883
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg-aaaactcaaactcaaaccca 231  Q
    |||||||||| |||| ||||| |  ||||||||||   |||||||||| |||||||||| |||||||||||||| |||||    
T  35069962 gttcggggtgggtacatatatccctgttacccgtcttgtacccgtattatgaaatcggggaaaactcaaactcataccca 35069883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 49250834 - 49250779
Alignment:
Q  165 tacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactca 219  Q
    ||||||||||| | ||||||||||||||||||| |||||| ||| |||||||||||    
T  49250834 tacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaactca 49250779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 12718970 - 12718900
Alignment:
Q  56 ctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||  |||||||  |||| ||||| ||  | ||||||||||| ||||||||||||||||||||||    
T  12718970 ctcctttaacgatcaatgaaagttcttatatcatgataattatcaaaccaaataacatgacatatcattat 12718900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 34085251 - 34085313
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||||||| |||| ||||  | |||||||| |||||||| ||| |||||||||||||||||    
T  34085251 gttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaa 34085313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 19003858 - 19003789
Alignment:
Q  57 tcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||| ||||||||  | || ||||| ||  ||||||||||||| |||||||||| |||||||||||    
T  19003858 tcctttaactatcaatgaaaattcttatatcatgacaattatcaaaccaaataacatggcatatcattat 19003789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 36616796 - 36616856
Alignment:
Q  59 ctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacata 119  Q
    ||||||||||||| |  | ||||||||||   ||||||||||||| |||||||||||||||    
T  36616796 ctttaaatatcaacgacaatttttataacttgacaattatcaaaccaaataacatgacata 36616856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 44632189 - 44632157
Alignment:
Q  178 gttacccgtcccatacccgtattttgaaatcgg 210  Q
    |||||||||||||||||||| ||||||||||||    
T  44632189 gttacccgtcccatacccgtgttttgaaatcgg 44632157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 14032419 - 14032556
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14032419 aatatgctcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacaacaattatcaaacaaaataaca 14032518  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||  ||||||||||||| |||||| |||||    
T  14032519 tgacatatcaacataaagtaattttatgcatttgggac 14032556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 14505949 - 14506159
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||     
T  14505949 aatatgctcactttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttagtttttataacacgacaattatcaaacaaaataacg 14506048  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac------aa------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    ||||||||||  | |||||| ||||||||||| |||||      ||      |||||||||| ||||||| ||||| ||||||||||||||||| || ||    
T  14506049 tgacatatcaacacaaagtagttttctgcatttgggacgggtttaagtatgggttcggggtgggtacctaaatacttgttacccgtcccatacctgtgtt 14506148  T
Q  201 ttgaaatcggg 211  Q
    |||||||||||    
T  14506149 ttgaaatcggg 14506159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 24603081 - 24602948
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  24603081 aatatgctcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatggtagtttttataacacgtcaattatcaaacaaaataaca 24602982  T
Q  113 tgacatatcattataaagtaattttctgcattcg 146  Q
    || || ||||  ||||||||||||||| ||||||    
T  24602981 tggcacatcaacataaagtaattttctacattcg 24602948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 12678318 - 12678088
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  12678318 aatatgctcactttaac-tttattagaccgattgatttagttgctcctttaaatatcaatgataatttttataacacgacaattatcaaacaaaataaca 12678220  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    |||||||||| |||||| |||||||||  |||||||||              |||| ||||| |||||||||||| | |||||||||||||||| || |     
T  12678219 tgacatatcaatataaaataattttctcaattcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtc 12678120  T
Q  201 ttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    |||||||| |||||||| |||||||| |||||    
T  12678119 ttgaaatcggggaaaacgcaaactcataccca 12678088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 14254821 - 14254958
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||||| |||||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||| ||| | |||||||||||||||    
T  14254821 aatatgttgactttaacatttattagaccgaatgatttaatcgctcctttaaatatcaatgatagtttttataacacatcaaatttcaaacaaaataaca 14254920  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||  ||||||| ||| | |||||| |||||    
T  14254921 tgacatatcaacataaagttattatttgcatttgggac 14254958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 30816120 - 30816244
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||  |||||||| ||||||||||||    
T  30816120 aatatgtacactttaacatttgttagaccgattgatttaggtgctcctttaaatgtcaatggtagtttttataacacggcaattatccaacaaaataaca 30816219  T
Q  113 tgacatatcattataaagtaatttt 137  Q
    | ||||||||  |||||||| ||||    
T  30816220 tcacatatcaacataaagtagtttt 30816244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 7394112 - 7393980
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||   |||||||||||||||||| |    
T  7394112 aatatgttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataata 7394013  T
Q  113 tgacatatcattataaagtaattttctgcattc 145  Q
    ||| ||| ||  ||||| ||| ||| |||||||    
T  7394012 tgatataccaacataaaataaatttatgcattc 7393980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 14245110 - 14245214
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  14245110 aatatgttcactttaacatttattagaccgaatgatttagtcgctcctttaaatattaatggtagtttttataacacgacaattttcaaacaaaataaca 14245209  T
Q  113 tgaca 117  Q
    |||||    
T  14245210 tgaca 14245214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 14411058 - 14410954
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  14411058 aatatgctcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgatggtttttataacacgacaattatcaaacaaaataaca 14410959  T
Q  113 tgaca 117  Q
     ||||    
T  14410958 cgaca 14410954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 10142737 - 10142533
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  10142737 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 10142638  T
Q  119 atcattataaagtaattttctgcattcgggaca------------agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||| ||||||| | |||| ||||||            ||||||||||| |||||||||||| ||||||| ||||||||||||| |||||| |    
T  10142637 atcaacataaaataattttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgaga 10142538  T
Q  207 tcggg 211  Q
    |||||    
T  10142537 tcggg 10142533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 2367195 - 2367399
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    |||||||||||||||||||||  | ||||||| ||  ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  2367195 tcactttaacatttgttagacaaaatgatttagtttatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 2367294  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    |||   ||||||||||||| | |||| |||||              |||||||||| |||| ||||||| ||||||||||||||||||||| |||||| |    
T  2367295 atccacataaagtaattttttccatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgaga 2367394  T
Q  207 tcggg 211  Q
    |||||    
T  2367395 tcggg 2367399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 32853713 - 32853917
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| || |||||||||||||||||||||||| |||||   |||||||||||||||||||||| ||||    
T  32853713 tcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataacat 32853812  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||||||||||| | |||| |||||              |||||||||| |||||||||||| ||||||||||||||||||||| |||||| |    
T  32853813 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaga 32853912  T
Q  207 tcggg 211  Q
    |||||    
T  32853913 tcggg 32853917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 11762342 - 11762522
Alignment:
Q  47 atttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattataaagtaattttctgcattcg 146  Q
    ||||| |||||||| |||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||  ||||||||||||||| |||| |    
T  11762342 atttagttgctcctataaatatcaatggtagtttttataacacgacaattatataacaaaataacatggcatatcaacataaagtaattttctacatttg 11762441  T
Q  147 gg------------acaagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||            |  |||||||||||   |||||||||| ||||||||||||||||||| | ||| |||||||||||||    
T  11762442 ggatgggtttgggtatgagttcggggtggacacctatatacccgttacccgtcccatacccttgtttagaaatcgggaaaa 11762522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 12309438 - 12309572
Alignment:
Q  10 aataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaata 109  Q
    ||||||||||| |||||||||||||||||||  | |||||||||||| |||||||||||||||| |||      ||| |  |||||||||||||||||||    
T  12309438 aataatatgtttactttaacatttgttagacgaaatgatttaattgcccctttaaatatcaatgatag------taatatgacaattatcaaacaaaata 12309531  T
Q  110 acatgacatatcattataaagtaattttctgcattcgggac 150  Q
    |||||||||||||  ||||||||||||| | |||| |||||    
T  12309532 acatgacatatcaacataaagtaattttttacatttgggac 12309572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 211
Target Start/End: Original strand, 24225569 - 24225771
Alignment:
Q  22 actttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacatat 120  Q
    ||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||||    
T  24225569 actttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatat 24225668  T
Q  121 cattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc 208  Q
    ||  ||||| ||||||| | |||| |||||              |||||||||| |||||||||||| |||||||||||||||| |||| |||||| |||    
T  24225669 caacataaaataattttttacatttgggacgggtttgggcatgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttgagatc 24225768  T
Q  209 ggg 211  Q
    |||    
T  24225769 ggg 24225771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 27534546 - 27534766
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||| ||||||||| |||||||||||||  | | ||||| ||| | ||||||||||||||| ||||||||| |||||  |||||||||||||||||||||    
T  27534546 aataagttcactttcacatttgttagacaaaattatttagttgattctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataac 27534645  T
Q  112 atgacatatcattataaagtaattttctgcattcgggacaag------------ttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    || ||||||||  |||||||| |||| | |||| |||||  |            ||||||||| |||||||||||| ||||||||||||||||||||| |    
T  27534646 ataacatatcaacataaagtagttttttacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgt 27534745  T
Q  200 tttgaaatc-gggaaaactca 219  Q
    || || ||| |||||||||||    
T  27534746 ttcgagatcggggaaaactca 27534766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 45 - 211
Target Start/End: Original strand, 27738666 - 27738845
Alignment:
Q  45 tgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacatatcattataaagtaattttctgcat 143  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||  |||||||||| |||||||||||| ||||||||  ||||||||||||| | |||    
T  27738666 tgatttagttgctcctttaaatatcaatggtagtttttattaacatgacaattatcatacaaaataacataacatatcaacataaagtaattttttacat 27738765  T
Q  144 tcgggacaagtt------------cggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    | |||||  |||            ||||||| |||| ||||||   |||||||||||||||||||| |||||||||||||    
T  27738766 ttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggg 27738845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 5863602 - 5863398
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||| ||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  | ||||||||||||||||||||| ||||    
T  5863602 tcactttcacattttttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaaaataacataacat 5863503  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||| || |||| | |||| |||||              ||||| |||| ||| |||||||| ||||||||||||||||||||| ||||||||    
T  5863502 atcaacataaaatatttttttacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaa 5863403  T
Q  207 tcggg 211  Q
    |||||    
T  5863402 tcggg 5863398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 10188292 - 10188174
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||| ||||||||||||| | ||    
T  10188292 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcgaacaaaataacataatat 10188193  T
Q  119 atcattataaagtaatttt 137  Q
    ||||  ||||| |||||||    
T  10188192 atcaacataaaataatttt 10188174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 12141254 - 12141385
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||| ||||||||| ||| |  ||||||||||||||||||||||| || |    
T  12141254 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgttagtttttattaagatgacaattatcaaacaaaataacataacgt 12141353  T
Q  119 atcattataaagtaattttctgcattcgggac 150  Q
    ||||  ||||| ||||||| | |||| |||||    
T  12141354 atcaacataaaataattttttacatttgggac 12141385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 14410928 - 14410858
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaac 222  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  14410928 gttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactcaaac 14410858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 32532423 - 32532497
Alignment:
Q  10 aataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat 84  Q
    ||||||||| ||||||||||||||||||||| || ||||||| ||| |||||||||||||| |||||||||||||    
T  32532423 aataatatgctcactttaacatttgttagacggaatgatttagttggtcctttaaatatcattggtagtttttat 32532497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 3484142 - 3484011
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| ||| |  |||||||| |||||||||||||| ||||    
T  3484142 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatgaaacaaaataacataacat 3484043  T
Q  119 atcattataaagtaattttctgcattcgggac 150  Q
    |||   |||||||| |||| | |||| |||||    
T  3484042 atccacataaagtagttttttacatttgggac 3484011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 9442445 - 9442507
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||| ||| |||||| ||||| ||||||||||||||||||||| |||||||||||||||||    
T  9442445 gttcggagtgggtacctctatacccgttacccgtcccatacccgtgttttgaaatcgggaaaa 9442507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 32532555 - 32532613
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||||||||||| | ||||||||||||||||||| |||||||||||||    
T  32532555 gttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcggg 32532613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 20349078 - 20349137
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||||||| |||||||||| | |||||| |||||||||||||| |||||||||||||    
T  20349078 agttcggggtgggtacctatatccccgttactcgtcccatacccgtgttttgaaatcggg 20349137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 18908907 - 18908981
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactca 225  Q
    |||| |||||| |||| ||||| || ||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  18908907 agtttggggtgggtacatatatccttgttacccgtcccatatccgtattttgaaatcggggaaaacccaaactca 18908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 32053107 - 32053189
Alignment:
Q  157 ggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactcaaacccagtcaaaa 238  Q
    |||||| |||| ||||||| |||||||||||||||| || | |||||||||| |||||||| || || |||||||||||||||    
T  32053107 ggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcggggaaaacccatacccaaacccagtcaaaa 32053189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 28079769 - 28079690
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    |||||||||| |||||||||| | ||||||||||||| ||||| | |||||||||| |||||||| ||||| || |||||    
T  28079769 gttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccataccca 28079690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 3483996 - 3483938
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||||||||||| |||||||| |||||||||||| ||| || ||||||    
T  3483996 gttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgagatcggg 3483938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 20611054 - 20610992
Alignment:
Q  154 ttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaac 216  Q
    |||||||||  ||| ||||| | ||||||||||||| ||||||||||||||||||||| ||||    
T  20611054 ttcggggtggatacatatattcccgttacccgtcccctacccgtattttgaaatcggggaaac 20610992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 29200089 - 29200020
Alignment:
Q  57 tcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||| ||||||||  |||| ||||| ||  ||||||||||||| |||||||||| |||||||||||    
T  29200089 tcctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatcattat 29200020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 32052927 - 32052988
Alignment:
Q  21 cactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttt 82  Q
    |||||||||||||||||||| || ||||||| ||  |||||||||||||||||  |||||||    
T  32052927 cactttaacatttgttagacggaatgatttatttaatcctttaaatatcaatgtaagttttt 32052988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 32053031 - 32053075
Alignment:
Q  93 aattatcaaacaaaataacatgacatatcattataaagtaatttt 137  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||    
T  32053031 aattatcaaacaaaataacatgacatatcaacataaagtattttt 32053075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 256561 - 256486
Alignment:
Q  157 ggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    |||||| |||||||||| | | ||||||||| | ||||| | |||||||||| ||||||||||||||||| |||||    
T  256561 ggggtgggtacctatatgcccattacccgtctcgtacccatgttttgaaatcggggaaaactcaaactcataccca 256486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 12141400 - 12141451
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttga 204  Q
    |||||||||| |||||||||||| ||| |||||||||||| |||| ||||||    
T  12141400 gttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttga 12141451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 15498339 - 15498397
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||| || |||||||||||| | ||||| ||| ||||||||| |||||||||||||    
T  15498339 gttcgggatgggtacctatatacccattacctgtctcatacccgtgttttgaaatcggg 15498397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 30986284 - 30986326
Alignment:
Q  169 tatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||    
T  30986284 tatatacccgttacccgtcccatacccgtgttttgagatcggg 30986326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 9458240 - 9458273
Alignment:
Q  93 aattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||| ||||||||||||||||||||||    
T  9458240 aattatcaaaccaaataacatgacatatcattat 9458273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 9458549 - 9458618
Alignment:
Q  57 tcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||| ||||||||  |||| ||||| ||  | ||||||||||| |||||| |||||||||||||||    
T  9458549 tcctttaactatcaatgaaagttcttatatcatgagaattatcaaaccaaataagatgacatatcattat 9458618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 18908774 - 18908847
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||||||  |||| ||||| ||  ||||||||||| | ||||||||||  ||||||||||    
T  18908774 ttgctcctttaactatcaatgaaagttcttatatcatgacaattatcaatccaaataacatggtatatcattat 18908847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 29199933 - 29199900
Alignment:
Q  178 gttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||||| |||||||||||||||||||||    
T  29199933 gttacccgtcccgtacccgtattttgaaatcggg 29199900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 30816275 - 30816343
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaactcaaac 222  Q
    |||||||||| || ||||||||| | |||||| ||||||||||||  ||| |||| ||||||||||||||    
T  30816275 gttcggggtgggttcctatatacccattacccatcccatacccgt-gtttaaaatggggaaaactcaaac 30816343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 7978633 - 7978597
Alignment:
Q  179 ttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||| |||||| |||||||||||||||||||||||||    
T  7978633 ttacacgtcccgtacccgtattttgaaatcgggaaaa 7978597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 9458677 - 9458757
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa-tcgggaaaactcaaactcaaaccca 231  Q
    |||||| |||| |||| ||||| | ||||| | ||||| |||||||||||||||| | |||||| |||||||||| |||||    
T  9458677 agttcgaggtgggtacatatatccccgttatctgtcccgtacccgtattttgaaattggggaaatctcaaactcataccca 9458757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 9458871 - 9458931
Alignment:
Q  151 aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||||| |||| ||||| | |||||||| |||| |||||||||| | ||||||||    
T  9458871 aagttcggggtgggtacatatattcccgttacccatcccgtacccgtattattaaatcggg 9458931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 211
Target Start/End: Complemental strand, 1724536 - 1724326
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  1724536 aatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatctaacaaaataaca 1724437  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    ||||||||||  |||||||| |||||||||||||||||              |||||||||| |||||||||||  ||||||||||||||||||| | ||    
T  1724436 tgacatatcaacataaagtagttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgtt 1724337  T
Q  201 ttgaaatcggg 211  Q
    |||||||||||    
T  1724336 ttgaaatcggg 1724326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 37107280 - 37107504
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||| ||||| |||||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||   |||||||||||||||||||||    
T  37107280 aatatgctcattttaatatttgtcagaccgattgatttagttgcttctttaaataccaatggtagtttttataacatggcaattatcaaacaaaataaca 37107379  T
Q  113 tgacatatcattataaagtaattttctgcattcggg------------acaagttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    ||||||||||  ||||||||||||||||||||||||            | || ||||||||| |||||||||||| ||||||||||||||||||||| ||    
T  37107380 tgacatatcaacataaagtaattttctgcattcgggatatattttggtataaattcggggtgggtacctatatacccgttacccgtcccatacccgtgtt 37107479  T
Q  201 ttgaaatcgggaaaactcaaactca 225  Q
    ||||||| |||||||| ||||||||    
T  37107480 ttgaaattgggaaaacccaaactca 37107504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 19534324 - 19534555
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19534324 aatatgctcactttaacatttgttagaccgattgatttagttgctcctttagatatcaatggtagtttttataacacgacaattatcaaacaaaataaca 19534423  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    ||||||||||  ||||| ||||||||| |||||| |||             |||||| |||| ||||||||||||  ||||||||||||||||||  |||    
T  19534424 tgacatatcaacataaaataattttctacattcgtgacgggtttgggtatgagttcgaggtgggtacctatatacctgttacccgtcccatacccagatt 19534523  T
Q  201 ttgaaatcgg-gaaaactcaaactcaaaccca 231  Q
    || ||||||| ||||||||| || ||||||||    
T  19534524 ttaaaatcggagaaaactcatacccaaaccca 19534555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 26564700 - 26564931
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||| |||||||||||||||  || |||||||||||| |||||    
T  26564700 aatatgttcactttaacatttgtttgaccgattgatttagttgttccgttaaatatcaatgatagtttttataacacggcagttatcaaacaaactaaca 26564799  T
Q  113 tgacatatcattataaagtaattttctgcattcgggacaag------------ttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    ||||||||||  |||||||| ||||||||||| |||||  |            ||||||||| |||||||||||| ||||||||||||||||||||  ||    
T  26564800 tgacatatcaacataaagtagttttctgcatttgggacgggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgtt 26564899  T
Q  201 ttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    |||||||| |||||| |||||||||| |||||    
T  26564900 ttgaaatcggggaaagctcaaactcataccca 26564931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 6482262 - 6482146
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  6482262 aatatgttcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgttagtttttataacacgacaattatcaaacaaaataaca 6482163  T
Q  113 tgacatatcattataaa 129  Q
    || ||||||| ||||||    
T  6482162 tggcatatcaatataaa 6482146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 425692 - 425818
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  425692 aatatgttcactttaagatttgttagaccgattgatttagttgttcttttaaatatcaatggtagtttttataacatgacaattatcaaacaaaataaca 425791  T
Q  113 tgacatatcattataaagtaattttct 139  Q
    || |||||||  |||||||||||||||    
T  425792 tggcatatcaacataaagtaattttct 425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 225
Target Start/End: Complemental strand, 12825680 - 12825462
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacata 119  Q
    ||||||||| |||| ||||||| ||||||||| ||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||||||||| |||    
T  12825680 tcactttaatatttattagaccaattgatttagttgctcctttaaatatcaattttagtttttataacacgataattatcaaacaaaataacatgatata 12825581  T
Q  120 tcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaat 207  Q
    |||  |||||||||||||||||| |||||||            | |||| ||||| |||| ||||||  ||||||||||||||||||||| |||||||||    
T  12825580 tcaacataaagtaattttctgcactcgggacaggtttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaat 12825481  T
Q  208 c-gggaaaactcaaactca 225  Q
    | |||||||| ||||||||    
T  12825480 cggggaaaacccaaactca 12825462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 37348992 - 37349129
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||| |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| | | ||||||||||||||||||||    
T  37348992 aatatgctcactttaagatttgttagaccgattaatttagttgctcctttaaatatcaacggtagtttttataacgcgagaattatcaaacaaaataaca 37349091  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    || |||||||  ||||| ||||||||||||||||||||    
T  37349092 tggcatatcaacataaaataattttctgcattcgggac 37349129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 7985348 - 7985210
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtag-tttttataacacaacaattatcaaacaaaataac 111  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||| |||||||||||| |||||||||||||||||||||    
T  7985348 aatattttcactttaacatttgttagaccaattgatttagttgctcatttaaatatcaacggtagttttttataacacgacaattatcaaacaaaataac 7985249  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||| |||||  ||||| || |||||||||||||||||    
T  7985248 atgacttatcaacataaaatacttttctgcattcgggac 7985210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 9230152 - 9230288
Alignment:
Q  13 aatatgttcacttt-aacatttgttagaccgattgatttaattgct--cctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaata 109  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  9230152 aatatgttcacttttaacatttgttagaccgattgatttagttgctttcctttaaatatcaatggtagtttttataacacgacagttatcaaacaaaata 9230251  T
Q  110 acatgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||| |    |  |||||||||||||||||||||    
T  9230252 acatgacatatta----atggtaattttctgcattcgggac 9230288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 42774629 - 42774754
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||| ||||||||||||||||  || ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  42774629 aatatgttcattttaacatttgttagaaggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 42774728  T
Q  112 atgacatatcattataaagtaatttt 137  Q
    |||||||||||  |||||||||||||    
T  42774729 atgacatatcaacataaagtaatttt 42774754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 39188384 - 39188519
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||| ||||||||||| ||  | |||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||    
T  39188384 aatatgttcactttaacatttgttagaacgattgatttagttttttctttaaatataaatggtagttttt-taacacgacagttatcaaacaaaataaca 39188482  T
Q  113 tgacatatcattataaagtaattttctgcattcggga 149  Q
    ||||||||||  |||||  |||||| |||||||||||    
T  39188483 tgacatatcaacataaaacaattttatgcattcggga 39188519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 13770681 - 13770544
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| |||||| |||||||||||||   ||||||||||||||||||||    
T  13770681 aatatgttcactttaacatttgtttgaccgattgatttagttgctccttcaaatattaatggtcgtttttataacacggtaattatcaaacaaaataaca 13770582  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    || | ||| |  ||||| || |||| ||||||||||||    
T  13770581 tggcttattaacataaaatagttttatgcattcgggac 13770544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 11027947 - 11028152
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| |||||||||||| ||| ||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  11027947 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatataaatagtagtttttattaacatgacaattatcaaacaaaataacataacat 11028046  T
Q  119 atcattataaagtaa-ttttctgcattcgggaca------------agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaa 205  Q
    |||| |||||||||| |||| | |||| ||||||            ||||||||||| |||||||||||| ||||||||||||||||||||| ||||||     
T  11028047 atcaatataaagtaatttttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgag 11028146  T
Q  206 atcggg 211  Q
    ||||||    
T  11028147 atcggg 11028152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 31752324 - 31752535
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||| ||||| || ||||||| ||| || ||||||||||| || |||||||||| ||||  |||||||||||||||||||||    
T  31752324 aatatgctcactttaacatttgatagacggaatgatttagttgatcttttaaatatcattgttagtttttattaacatgacaattatcaaacaaaataac 31752423  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    |||||||||||  ||||||||||||| | |||| |||||              |||||||||| | ||||||||||||||||| |||| ||||||||| |    
T  31752424 atgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggtgggaacctatatactcgttactcgtctcatacccgtgt 31752523  T
Q  200 tttgaaatcggg 211  Q
    ||||||||||||    
T  31752524 tttgaaatcggg 31752535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 48459349 - 48459474
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||||| ||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  48459349 aatatgctcactttaacattttttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 48459448  T
Q  112 atgacatatcattataaagtaatttt 137  Q
    || ||||||||  |||||||||||||    
T  48459449 ataacatatcaacataaagtaatttt 48459474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 47550573 - 47550360
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  47550573 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 47550474  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||| ||||||| | |||| |||||              |||||||||| ||||||||||||  |||||||||||||||||||| |||||| |    
T  47550473 atcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgaga 47550374  T
Q  207 tc-gggaaaactca 219  Q
    || |||||||||||    
T  47550373 tcggggaaaactca 47550360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 238
Target Start/End: Complemental strand, 5902834 - 5902602
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||| || ||||    
T  5902834 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataagataacat 5902735  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  |||||||| |||| | |||| |||||              |||||||||| |||||||||||| ||||||||||||||||||||| ||| || |    
T  5902734 atcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 5902635  T
Q  207 tc-gggaaaactcaaactcaaacccagtcaaaa 238  Q
    || |||||||| || || |||||||||||||||    
T  5902634 tcggggaaaacccatacccaaacccagtcaaaa 5902602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 251
Target Start/End: Original strand, 32585363 - 32585608
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatg-gtagttttta-taacacaacaattatcaaacaaaataacatgaca 117  Q
    ||||||||||| ||||||||| || ||||||| ||| |||||||||||||||||  ||||||||| |||||  |||||||||||||||||||||| ||||    
T  32585363 tcactttaacaattgttagacggaatgatttagttgatcctttaaatatcaatgattagtttttattaacatgacaattatcaaacaaaataacaagaca 32585462  T
Q  118 tatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaa 205  Q
    ||| |  ||||||||| ||| | |||| |||||              |||| ||||| |||||||||||| ||||||| ||||||||||||| |||||||    
T  32585463 tataaacataaagtaagtttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaa 32585562  T
Q  206 atcgg-gaaaactcaaactcaaacccagtcaaaaggagggaaaaccg 251  Q
    ||||| ||||| ||| || ||||||||||||||| | ||||||||||    
T  32585563 atcggagaaaattcatacccaaacccagtcaaaaag-gggaaaaccg 32585608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 211
Target Start/End: Complemental strand, 32596410 - 32596200
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||| |||||||||||  | ||||||| ||| ||||| |||||| |||| ||||||||||||||  ||||||||||||| |||| |||    
T  32596410 aatatgctcactttaaaatttgttagacttaatgatttagttgttccttcaaatattaatgctagtttttataacatgacaattatcaaaccaaatgaca 32596311  T
Q  113 tgacatatcattataaagtaattttctgcattcgggacaagttcgg------------ggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    ||  ||||||  ||||| ||||||||| |||||| |||||||| ||            |||| | |||||||||| ||||||||||||||||||||| ||    
T  32596310 tggtatatcaacataaaataattttctacattcgagacaagtttgggtatgagtttgaggtggggacctatatacccgttacccgtcccatacccgtgtt 32596211  T
Q  201 ttgaaatcggg 211  Q
    |||||||||||    
T  32596210 ttgaaatcggg 32596200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 39046821 - 39046958
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||| ||||||||||||||||| || ||||||| ||  ||||||||||||||| ||||||||||| |||||  |||||||||||||||||||||    
T  39046821 aatatgctcattttaacatttgttagacggaatgatttagttaatcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaataac 39046920  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    || ||||||||  ||||||||||||| | |||| |||||    
T  39046921 at-acatatcaacataaagtaattttttacatttgggac 39046958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 47239612 - 47239397
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||| || |   | ||||||| ||| ||||||||||||||||| |||||||||| ||||  |||||||||||||||||||||    
T  47239612 aatatgctcactttaacatttgataaatgaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataac 47239513  T
Q  112 atgacatatcattataaagtaattttctgcattcgggaca------------agttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    |||||||||||  ||||| ||||||| | |||| ||||||             |||| ||||| | |||||||||| ||||||||||||||||||||| |    
T  47239512 atgacatatcaacataaaataattttttacatttgggacaggtatgggtatgggttcagggtgggaacctatatacccgttacccgtcccatacccgtgt 47239413  T
Q  200 tttgaaatcgggaaaa 215  Q
    ||| ||||||| ||||    
T  47239412 tttaaaatcggaaaaa 47239397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 42299659 - 42299784
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||||||||||||||||||||  |  ||||||| |||||| ||||||||||||  |||||||||| |||||  |||||||||||||||||||||    
T  42299659 aatatgttcactttaacatttgttagagaggatgatttagttgctcatttaaatatcaacagtagtttttattaacaagacaattatcaaacaaaataac 42299758  T
Q  112 atgacatatcattataaagtaatttt 137  Q
    ||| |||||||  |||||||| ||||    
T  42299759 atggcatatcaacataaagtactttt 42299784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 43893103 - 43893312
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  43893103 tcactttcacatttgttagacaaaataatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 43893202  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  |||||||| |||| | |||| |||||             | |||||||||  ||||||||||| ||||||||||||||||||||| ||| || |    
T  43893203 atcaacataaagtagttttttacatttgggacgggtttgggtatgaattcggggtggatacctatatacccgttacccgtcccatacccgtgtttcgaga 43893302  T
Q  207 tcgggaaaac 216  Q
    ||||| ||||    
T  43893303 tcggggaaac 43893312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 31918779 - 31918661
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  31918779 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 31918680  T
Q  119 atcattataaagtaatttt 137  Q
    ||||  |||||||| ||||    
T  31918679 atcaacataaagtagtttt 31918661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 29755545 - 29755456
Alignment:
Q  24 tttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacat 113  Q
    |||||||||||||||| ||||||||||| || || |||||||||||||||||||| ||||||||||   |||||||||||||||||||||    
T  29755545 tttaacatttgttagatcgattgatttagttacttctttaaatatcaatggtagtgtttataacacggtaattatcaaacaaaataacat 29755456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 21423735 - 21423867
Alignment:
Q  19 ttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgaca 117  Q
    |||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||| || |||    
T  21423735 ttcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataatataaca 21423834  T
Q  118 tatcattataaagtaattttctgcattcgggac 150  Q
    |||||  |||||||| |||| | |||| |||||    
T  21423835 tatcaacataaagtagttttttacatttgggac 21423867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 28695357 - 28695245
Alignment:
Q  24 tttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcat 123  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||| |||| |||||||||||||   |||||||||||| ||||||||||  |||||||     
T  28695357 tttaacatttgttaaaccgaatgatttagttgctcctttaaatattaatgatagtttttataacgtgacaattatcaaataaaataacattgcatatcaa 28695258  T
Q  124 tataaagtaattt 136  Q
     |||||| |||||    
T  28695257 cataaagcaattt 28695245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 6382493 - 6382390
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  6382493 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 6382394  T
Q  119 atca 122  Q
    ||||    
T  6382393 atca 6382390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 44317409 - 44317527
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| |||||||||||||||| |||||||||| |||||  ||||||||||||||||||||||| ||||    
T  44317409 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatcgtagtttttattaacatgacaattatcaaacaaaataacataacat 44317508  T
Q  119 atcattataaagtaatttt 137  Q
    ||||  |||||||| ||||    
T  44317509 atcaacataaagtagtttt 44317527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 39375160 - 39375253
Alignment:
Q  25 ttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacat 118  Q
    |||||||||||| ||  |||| ||||| ||| |||||||||||| | ||||||||||||||||||  |||||||||||||||||||||||||||    
T  39375160 ttaacatttgttcgattgatttatttagttgttcctttaaatattagtggtagtttttataacacggcaattatcaaacaaaataacatgacat 39375253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 7608845 - 7609049
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| |||||||||||||||||  |||||||| |||||  ||||||||||||||||||||||| ||||    
T  7608845 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatgacagtttttattaacatgacaattatcaaacaaaataacataacat 7608944  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||| |||| |||| | |||| |||||              |||||||||| |||||||||||| ||||||||||||||||||||| ||| || |    
T  7608945 atcaacatagagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 7609044  T
Q  207 tcggg 211  Q
    |||||    
T  7609045 tcggg 7609049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 15987455 - 15987372
Alignment:
Q  25 ttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaa 107  Q
    |||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||    
T  15987455 ttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaa 15987372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 210
Target Start/End: Complemental strand, 11123089 - 11122886
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| |||||||||||||||||||| |||||| |||||  |||||||| |||||||||||||  ||||    
T  11123089 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtactttttattaacatgacaattataaaacaaaataacaaaacat 11122990  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  |||||||| |||| | |||| |||||              |||||||||| |||||||||||| ||||||||||||||||||||| ||| || |    
T  11122989 atcaacataaagtagttttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 11122890  T
Q  207 tcgg 210  Q
    ||||    
T  11122889 tcgg 11122886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 4766540 - 4766419
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttt--ataacacaacaattatcaaacaaaataa 110  Q
    |||||||| ||||||||||||||||||   | ||||||| ||  ||||||||||||||||| ||||||||   |||||  |||||||||||| |||||||    
T  4766540 aatatgtttactttaacatttgttagaggtaatgatttagtttatcctttaaatatcaatgatagttttttattaacatgacaattatcaaataaaataa 4766441  T
Q  111 catgacatatcattataaagta 132  Q
    ||| ||||||||  ||||||||    
T  4766440 cataacatatcaacataaagta 4766419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 55826807 - 55826726
Alignment:
Q  57 tcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacatatcattataaagtaatttt 137  Q
    |||||||||||||||||||||||||||| |||   ||||||||||||||||||||||| ||||||||  |||||||| ||||    
T  55826807 tcctttaaatatcaatggtagtttttattaacgtgacaattatcaaacaaaataacataacatatcaacataaagtagtttt 55826726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 13015443 - 13015344
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataac------acaacaattatcaaacaaaataacatgacatatcattataaagtaattttctgcattcg 146  Q
    |||||||||||||||||||||||||||||||||||      |  | ||||||||||||||||||||||||||||||  ||||| ||||||| | ||||||    
T  13015443 ttgctcctttaaatatcaatggtagtttttataacatgaaaatgaaaattatcaaacaaaataacatgacatatcaacataaaataattttttacattcg 13015344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 6382346 - 6382289
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgg 210  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| |||||| |||||    
T  6382346 gttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcgg 6382289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 53906508 - 53906437
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat 84  Q
    |||| ||||||||||||||||||||||  || ||||||| ||| ||| |||||||||||| |||||||||||    
T  53906508 aatacgttcactttaacatttgttagaaggaatgatttagttgatccattaaatatcaatagtagtttttat 53906437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 44317556 - 44317614
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| ||| || ||||||    
T  44317556 gttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggg 44317614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 18423476 - 18423549
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||||||  |||||||||| ||  | | ||||||||| ||||||||||||||||||||||    
T  18423476 ttgctcctttaactatcaatgaaagtttttatatcaagatagttatcaaaccaaataacatgacatatcattat 18423549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 13015602 - 13015550
Alignment:
Q  10 aataatatgttcactttaacatttgttagaccgattgatttaattgctccttt 62  Q
    |||||||||||||||||||||| ||||||||||| | ||||| ||||||||||    
T  13015602 aataatatgttcactttaacatctgttagaccgaataatttagttgctccttt 13015550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 9929242 - 9929179
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||||||||||| |||||||||| |  ||||||||| | ||||||||||||||||||| ||||||    
T  9929242 agttcggggtgggtacctatatccatgttacccgtactatacccgtattttgaaatcaggaaaa 9929179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 15987336 - 15987269
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactca 219  Q
    |||||||||| ||| |||||||| |||||||| |||||||||||| |||| ||||| |||||||||||    
T  15987336 gttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaactca 15987269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 39375314 - 39375357
Alignment:
Q  168 ctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  39375314 ctatatacccgttacccgtcctatacccgtattttgaaatcggg 39375357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 3737797 - 3737859
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||||||| || |||| ||||  ||||||||||||||||||||||| ||||||||| |||||||    
T  3737797 gttcgggatgggtacatataacctcgttacccgtcccatacccgtgttttgaaattgggaaaa 3737859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 21544600 - 21544662
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||||||| |||| ||||| | | ||||| ||||| |||||||||||||||||||||||||    
T  21544600 gttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaatcgggaaaa 21544662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 25941159 - 25941221
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||||||| |||||||| | | ||||||| ||||| ||||||| |||||||||||||||||    
T  25941159 gttcggggtgggtacctatcttcccgttacctgtcccgtacccgtgttttgaaatcgggaaaa 25941221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 29527833 - 29527891
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||| ||||| | ||||||||||| | |||||||||||||||||||||    
T  29527833 gttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggg 29527891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 43309528 - 43309566
Alignment:
Q  177 cgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  43309528 cgttacccgtcccatacccgtgttttgaaatcgggaaaa 43309566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 48459502 - 48459560
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| ||||||||||||  ||||||||| |||||||| | |||||||||||||    
T  48459502 gttcggggtgggtacctatatacctgttacccgttccatacccatgttttgaaatcggg 48459560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 55826697 - 55826639
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||||||||||| |||||||||||||||||| || ||| || ||||||    
T  55826697 gttcggggtgggtacctatatacccgttacccgtcccatacctgtgtttcgagatcggg 55826639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 15733727 - 15733654
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||||||  |||| | ||| ||  ||||||||||||| |||||||||| |||||||||||    
T  15733727 ttgctcctttaactatcaatgaaagttctcatatcatgacaattatcaaaccaaataacatggcatatcattat 15733654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 24637080 - 24637153
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||| |||||| ||||||||  |||| ||||| ||  ||||||||||||| |||||||||| |||||||||||    
T  24637080 ttgcttctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatcattat 24637153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 15733601 - 15733533
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcg-ggaaaactca 219  Q
    ||||||||||| |||| |||||   ||||||||||| | ||||||||||||||||||| ||||||||||    
T  15733601 agttcggggtgggtacatatatctccgttacccgtctcgtacccgtattttgaaatcgaggaaaactca 15733533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 41915193 - 41915121
Alignment:
Q  54 tgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||| ||||| ||  |||| ||||| ||  ||||||||||||| |||||||||| |||||||||||    
T  41915193 tgctcctttaactatcagtgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatcattat 41915121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 126
Target Start/End: Complemental strand, 1866719 - 1866684
Alignment:
Q  91 acaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||||| ||||||||||||||||||||||    
T  1866719 acaattatcaaaccaaataacatgacatatcattat 1866684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 14605999 - 14605920
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgg-gaaaactcaaactcaaaccca 231  Q
    |||||||||| |||| ||||| |  |||||||||| | |||||||||||||||||||| |||||| ||||| || |||||    
T  14605999 gttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccataccca 14605920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 29527693 - 29527772
Alignment:
Q  47 atttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||| |||||||||||| ||||||||  |||| ||||| ||  ||||||||||||  |||||||||  |||||||||||    
T  29527693 atttagttgctcctttaactatcaatgaaagttcttatatcatgacaattatcaaatcaaataacatagcatatcattat 29527772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 1866623 - 1866561
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||||||||||  ||| ||||| | | ||||||||| | |||||||||||||||||||||||||    
T  1866623 gttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaa 1866561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 10302105 - 10302163
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||| ||||  | ||||||||||| |||||||||| ||||||||||||    
T  10302105 gttcggggtgggtacatataaccccgttacccgtctcatacccgtactttgaaatcggg 10302163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 47103759 - 47103813
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaat 207  Q
    |||||||||| |||| ||||| | ||||||||| ||| |||||||||||||||||    
T  47103759 gttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaat 47103813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 568303 - 568372
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatca 122  Q
    |||||||||||| ||||  ||  |||| ||||| ||  ||||||||||||| ||||||||||||||||||    
T  568303 ttgctcctttaactatccgtgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatca 568372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 4741290 - 4741217
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcg-ggaaaactcaaactca 225  Q
    |||||||||| |||| ||||| |  |||| ||||||||||||| | |||| |||||| ||||||||||||||||    
T  4741290 gttcggggtgggtacttatatccctgttatccgtcccatacccatgttttaaaatcgaggaaaactcaaactca 4741217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 11172855 - 11172928
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||  ||  |||| ||||| ||  ||||||||||||| |||||||||| |||||||||||    
T  11172855 ttgctcctttaactatccgtgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatcattat 11172928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 16216822 - 16216789
Alignment:
Q  93 aattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||| ||||||||||||||||||||||    
T  16216822 aattatcaaaccaaataacatgacatatcattat 16216789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 21423886 - 21423926
Alignment:
Q  157 ggggtgtgtacctatatactcgttacccgtcccatacccgt 197  Q
    |||||| |||||||||||| ||||||||||| |||||||||    
T  21423886 ggggtgggtacctatatacccgttacccgtctcatacccgt 21423926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 6e-55; HSPs: 84)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 5376953 - 5377178
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||    
T  5376953 aatatgctcattttaacatttgttaaaccgattgatttagttgctcctttaaatatcattggtagtttttataacacgacaattatcaaacaaaattaca 5377052  T
Q  113 tgacatatcattataaagtaattttctgcattcgggaca------------agttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    ||| ||||||  |||||||||||||||||||||||||||             |||||||||| |||||||||||| | |||||||||||||||| || ||    
T  5377053 tgatatatcaacataaagtaattttctgcattcgggacagatttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgtt 5377152  T
Q  201 ttgaaatc-gggaaaactcaaactca 225  Q
    |||||||| |||||||| ||||||||    
T  5377153 ttgaaatcggggaaaacccaaactca 5377178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 24 - 251
Target Start/End: Complemental strand, 27850540 - 27850300
Alignment:
Q  24 tttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcat 123  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||    
T  27850540 tttaacatttgttagatcgattgatttagttgctcctttaaatatcaatgaaagtttttataacacgacaattatcaaacaaaataacatgacatatcat 27850441  T
Q  124 tataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gg 210  Q
      |||||||||||||| ||||||||||              ||||||| || ||||||||| || ||||||||||||||||||||| |||||||||| ||    
T  27850440 cgtaaagtaattttctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcggg 27850341  T
Q  211 gaaaactcaaactcaaacccagtcaaaaggagggaaaaccg 251  Q
    |||||| || || |||||||| |||||| | || |||||||    
T  27850340 gaaaacccatacccaaacccaatcaaaacggggaaaaaccg 27850300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 211
Target Start/End: Complemental strand, 18826100 - 18825887
Alignment:
Q  10 aataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaata 109  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| || |||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  18826100 aataatatgctcactttaacatttgttagaccgattgatttagttgttcttttatatatcaatggtagtttttataacacgacaattatcaaacaaaata 18826001  T
Q  110 acatgacatatcattataaagtaattttctgcattcggg------------acaagttcggggtgtgtacctatatactcgttacccgtcccatacccgt 197  Q
    ||||| |||||||   |||| |||||||||| ||| |||            ||  |||||||||| |||||||||||| |||||||||||||||||||||    
T  18826000 acatggcatatcaacgtaaaataattttctgtatttgggatgggtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgt 18825901  T
Q  198 attttgaaatcggg 211  Q
     |||||||||||||    
T  18825900 gttttgaaatcggg 18825887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 223
Target Start/End: Original strand, 16078881 - 16079104
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  16078881 aatatgttcactttaacattttttagaccgattgatttagtttctcctttaaatatcaagggtagtttttataacacgacaattatcaaacaaaataaca 16078980  T
Q  113 tgacatatcattataaagtaattttctgcattc------------gggacaagttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    || |||||||   ||||||||||||||| ||||            || | | ||| |||||| | |||||||||| ||||||||||||||||||||| ||    
T  16078981 tggcatatcaacgtaaagtaattttctgtattcatgacgagtttgggtataggtttggggtgggcacctatatacccgttacccgtcccatacccgtgtt 16079080  T
Q  201 ttgaaatcgg-gaaaactcaaact 223  Q
    |||| ||||| |||||| ||||||    
T  16079081 ttgagatcggagaaaacccaaact 16079104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 12980244 - 12980455
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  12980244 aatatgttcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacgaaaattatcaaacaaaataaca 12980343  T
Q  113 tgacatatcattataaagta-attttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    || |||||||  ||||| ||  |||| |||||| |||||              |||||||||| |||| ||||||| | ||||||||||||||||||| |    
T  12980344 tggcatatcaacataaaatattttttttgcatttgggacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgt 12980443  T
Q  200 tttgaaatcggg 211  Q
    ||||||||||||    
T  12980444 tttgaaatcggg 12980455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 222
Target Start/End: Original strand, 26622834 - 26623041
Alignment:
Q  28 acatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattata 127  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||    
T  26622834 acatttgtttgaccaattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatggcatatcaacata 26622933  T
Q  128 aagtaattttctgcattcgggacaagtt------------cggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaa 214  Q
    || ||||||| ||||||||  || ||||            ||||||| |||| ||||||| | |||||| |||||||||||| |||||||||| ||||||    
T  26622934 aaataattttttgcattcgaaacgagtttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaaa 26623033  T
Q  215 actcaaac 222  Q
    || |||||    
T  26623034 acccaaac 26623041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 215
Target Start/End: Original strand, 45379980 - 45380189
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    |||||||||||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  45379980 tcactttaacatttgttagacgaactgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacat 45380079  T
Q  119 atcattataaagtaa-ttttctgcattcgggacaa------------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaa 205  Q
     |||  ||||||||| |||| | |||| ||||| |            |||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  45380080 gtcaacataaagtaatttttttacatttgggacgagtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaa 45380179  T
Q  206 atcgggaaaa 215  Q
    ||||||||||    
T  45380180 atcgggaaaa 45380189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 46127398 - 46127271
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacata 119  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||    
T  46127398 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatggtagttattataacacgacaatgatcaaacaaaataacatgacata 46127299  T
Q  120 tcattataaagtaattttctgcattcgggac 150  Q
    ||   ||||| |||||||||||||| |||||    
T  46127298 tc---ataaaataattttctgcatttgggac 46127271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 2630799 - 2630661
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  2630799 aatatgttcactttaacatttgatagaccgattgatttagttgctcatttaaatatcaatggtagtttttataatacggcaattatcaaacaaaataaca 2630700  T
Q  113 tgacatatcattataaagta-attttctgcattcgggac 150  Q
    || |||||||  ||||||||  |||| ||||||||||||    
T  2630699 tggcatatcaacataaagtagtttttttgcattcgggac 2630661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 3920417 - 3920616
Alignment:
Q  24 tttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcat 123  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||     
T  3920417 tttaacatttgttagaccgattcatttagttgttcctttaaatatcaatggtagtttttataacatggcaattatcaaacaaaataacatggcatatcaa 3920516  T
Q  124 tataaagtaattttctgcattcgggaca------------agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
     ||||| ||||||||| |||||||||||             |||||||||| ||||||||||||  |||| |||||||||||| || |||||||||||||    
T  3920517 cataaaataattttctacattcgggacagttttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggg 3920616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 208
Target Start/End: Original strand, 24425249 - 24425455
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||| | |||||||||||| |||||||    
T  24425249 aatatgctcactttaacatttgttagaccggttgatttatttg-tcctttaaatatcaatggtagtttttataacacgataattatcaaacagaataaca 24425347  T
Q  113 tgacatatcattataaagtaattttctgcattcgggacaagt------------tcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    || |||||||  ||| ||||||||| |||||| || ||  ||            || ||||| |||||||||||| ||||||||||||||||||||| ||    
T  24425348 tggcatatcaacatatagtaattttatgcatttggaacgggtttggaaatggggtcagggtgggtacctatatacccgttacccgtcccatacccgtgtt 24425447  T
Q  201 ttgaaatc 208  Q
    ||||||||    
T  24425448 ttgaaatc 24425455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 222
Target Start/End: Complemental strand, 26004675 - 26004477
Alignment:
Q  35 ttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattataaagtaat 134  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||||||| |  |||||||||||||||||||||||| |||||||  ||||||||||    
T  26004675 ttagaccgattgatttagtcgctcctttaaatatcaatgatagtttttataagaagacaattatcaaacaaaataacatggcatatcaacataaagtaat 26004576  T
Q  135 tttctgcattcgggacaa----------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcg-ggaaaactcaaac 222  Q
    |||||||||||||| | |          |||||||||| ||| ||||||||  ||||||||||||||||||   ||||||||||| ||||||| |||||    
T  26004575 tttctgcattcggggcgagttggtatgggttcggggtgggtatctatatacctgttacccgtcccatacccaagttttgaaatcgaggaaaacccaaac 26004477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 37579130 - 37579261
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||||||||||||||  |||||||||| |||||| |||||||||||||| || |||||||||||  ||||||||||||||||||||||    
T  37579130 aatatgctcactttaacatttgttagatggattgatttagttgctcatttaaatatcaatgataatttttataacatgacaattatcaaacaaaataaca 37579229  T
Q  113 tgacatatcattataaagtaattttctgcatt 144  Q
    || |||| ||  ||||||||||||||||||||    
T  37579230 tggcatagcaacataaagtaattttctgcatt 37579261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 24753050 - 24753247
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| || ||||||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  24753050 tcactttcacatttgttagacaaaataatttagttgatc-tttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 24753148  T
Q  119 atcattataaagtaattttctgcattcgggacaagttcgggg-tgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaac 216  Q
    ||||  ||||| ||||||| | |||| |||||  ||| |||  || |||||||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  24753149 atcaacataaaataattttttacatttgggacgggtttgggtatgggtacctatatacccgttacccgtcccatacccgtgttttgagatcgggaaaac 24753247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 41741675 - 41741537
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||||||||||||  | ||||||||||| ||| ||||||||||||||||||||||| |||||  | |||||||||||||||||||    
T  41741675 aatatgctcactttaacatttgttagacgtaatgatttaattgatccgttaaatatcaatggtagtttttattaacatgataattatcaaacaaaataac 41741576  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||| |||||||||||||| | |||| |||||    
T  41741575 atgacatatcagtataaagtaattttttacatttgggac 41741537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 17885332 - 17885470
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||||||||||||||| ||||  || ||||||| ||| ||||||||||||||||||||||||||| | |||  |||||||||||||||||||||    
T  17885332 aatatgttcactttaacatttgatagatggaatgatttagttgatcctttaaatatcaatggtagtttttattgacatgacaattatcaaacaaaataac 17885431  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    |||||||||||  ||||||||||||| | |||| |||||    
T  17885432 atgacatatcaacataaagtaattttttacatttgggac 17885470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 25783125 - 25782995
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacata 119  Q
    ||||||||| |||| ||| ||||||||||||| ||||||||||||||||  ||| |||||||||||||||  ||||||||||||||||||| |||| |||    
T  25783125 tcactttaatatttattataccgattgatttagttgctcctttaaatattgatgatagtttttataacactgcaattatcaaacaaaataatatgagata 25783026  T
Q  120 tcattataaagtaattttctgcattcgggac 150  Q
    | |  ||||||||||||||||||||||||||    
T  25783025 ttaacataaagtaattttctgcattcgggac 25782995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 37182142 - 37182252
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    ||||||||||||||||||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  37182142 aatatgttcactttaacatttgttagacacaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 37182241  T
Q  112 atgacatatca 122  Q
    |||||||||||    
T  37182242 atgacatatca 37182252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 38140012 - 38139894
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||||||||||||||||| || ||||||| ||| ||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||    
T  38140012 tcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgacat 38139913  T
Q  119 atcattataaagtaatttt 137  Q
    |||| |||||| |||||||    
T  38139912 atcaatataaaataatttt 38139894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 44986124 - 44986015
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  44986124 aatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 44986025  T
Q  112 atgacatatca 122  Q
    || ||||||||    
T  44986024 at-acatatca 44986015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 39316862 - 39316987
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||||||||||||  | ||||||||| | ||||| ||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  39316862 aatatgctcactttaacatttgttagacgtaatgatttaatcgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 39316961  T
Q  112 atgacatatcattataaagtaatttt 137  Q
    |||||||||||  ||||| |||||||    
T  39316962 atgacatatcaacataaaataatttt 39316987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 30650505 - 30650702
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||   |||||||||||||||||||||| ||||    
T  30650505 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataacat 30650604  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttga 204  Q
    ||||  ||||||||||||| | |||| |||||              |||||||||| |||||||||||| ||||||||||||||||||||| ||||||    
T  30650605 atcaacataaagtaattttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttga 30650702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 211
Target Start/End: Complemental strand, 39456239 - 39456030
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataac-acaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||||||||||||  | ||||||||||| |||||  ||||||||||||| ||||||| || |   ||||||||||||||||||||    
T  39456239 aatatgctcactttaacatttgttagacgtaatgatttaattgatccttccaatatcaatggtaatttttattaccatggcaattatcaaacaaaataac 39456140  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac-----------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    |||||||||||  ||||||||||||| | |||| |||||             |||||||||| |||||||||||| ||||||||||||||||||| | ||    
T  39456139 atgacatatcaacataaagtaatttt-tacatttgggacgggtatgagtatggttcggggtgggtacctatatacccgttacccgtcccatacccatgtt 39456041  T
Q  201 ttgaaatcggg 211  Q
    |||||||||||    
T  39456040 ttgaaatcggg 39456030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 150
Target Start/End: Original strand, 23328476 - 23328615
Alignment:
Q  12 taatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataac 111  Q
    ||||||| |||||||| ||||| ||||||||||||||||| ||  ||||||||||||||||| || |||||||| ||| |||||||||||||||||||||    
T  23328476 taatatgctcactttagcatttattagaccgattgatttagttattcctttaaatatcaatgataatttttatagcacgacaattatcaaacaaaataac 23328575  T
Q  112 atgacatatcattat-aaagtaattttctgcattcgggac 150  Q
    | ||||| |||  || ||| ||||||||| ||||||||||    
T  23328576 aagacatgtcaacataaaaataattttctccattcgggac 23328615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 5916280 - 5916194
Alignment:
Q  24 tttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataa 110  Q
    |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  5916280 tttaacatttgttagaccgattgattgatttactcctttaaatatcaatggtagttttgataacacagcaattatcaaacaaaataa 5916194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 44734583 - 44734368
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataac 111  Q
    |||||| || |||||| |||||||||||  | ||||||||||| ||||| ||||||||||| |||||||||| ||||  |||||||||||| ||||||||    
T  44734583 aatatgctcgctttaatatttgttagacgtaatgatttaattgatccttcaaatatcaatgatagtttttattaacatgacaattatcaaataaaataac 44734484  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    |||||||||||  ||||||||||||| | |||| |||||              |||||||||| |||||||||||| | ||||| ||||||||||||| |    
T  44734483 atgacatatcaacataaagtaattttttacatttgggacggatatgtgtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgt 44734384  T
Q  200 tttgaaatcgggaaaa 215  Q
    |||||||||| |||||    
T  44734383 tttgaaatcgagaaaa 44734368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 37196227 - 37196099
Alignment:
Q  10 aataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaat 108  Q
    ||||||| | ||||||||||||||||||||| || ||||||| ||| || |||| ||||||||||||||||||| |||||  ||| ||||||||||||||    
T  37196227 aataatacgctcactttaacatttgttagacggaatgatttagttgatcttttatatatcaatggtagtttttattaacatgacagttatcaaacaaaat 37196128  T
Q  109 aacatgacatatcattataaagtaatttt 137  Q
    ||||| ||||||||  |||||||||||||    
T  37196127 aacataacatatcaacataaagtaatttt 37196099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 45885984 - 45885771
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||| | ||| ||||||||||||||||| |||||||||| ||||   |||||||||||||||||||||| ||||    
T  45885984 tcactttcacatttgttagacaaaatgattaagttgatcctttaaatatcaatgatagtttttattaacatggcaattatcaaacaaaataacataacat 45885885  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||||||||||| | |||| |||||              |||||||||| ||||||||||||| |||||||||||||||||||| |||||| |    
T  45885884 atcaacataaagtaattttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgaga 45885785  T
Q  207 tc-gggaaaactca 219  Q
    || |||||||||||    
T  45885784 tcggggaaaactca 45885771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 7779882 - 7780086
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  7779882 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 7779981  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||| ||| ||| | |||| |||||            | |||||||||| |||||||||||| | ||| ||||||||||||||| |||||| |    
T  7779982 atcaacataaaataaatttttacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgaga 7780081  T
Q  207 tcggg 211  Q
    |||||    
T  7780082 tcggg 7780086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 215
Target Start/End: Complemental strand, 18125447 - 18125239
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| | ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  18125447 tcactttcacatttgttagacaaaattatttagttgattctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 18125348  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  |||||||| |||| | |||| |||||              |||||||||| |||||||||||| ||||||||||||||||||||| ||| || |    
T  18125347 atcaacataaagtagttttttacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 18125248  T
Q  207 tcgggaaaa 215  Q
    |||||||||    
T  18125247 tcgggaaaa 18125239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 231
Target Start/End: Original strand, 21702533 - 21702758
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| |||||||||||| |||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  21702533 tcactttcacatttgttagacaaaattatttagttgatcctttaaatataaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 21702632  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  |||||||| |||| | |||| |||||              |||||||||| |||||||||||| ||||||||||||||||||||| ||| || |    
T  21702633 atcaacataaagtagttttttacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 21702732  T
Q  207 tc-gggaaaactcaaactcaaaccca 231  Q
    || |||||||| || ||||| |||||    
T  21702733 tcggggaaaacccatactcataccca 21702758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 35074343 - 35074461
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  35074343 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 35074442  T
Q  119 atcattataaagtaatttt 137  Q
    ||||  |||||||| ||||    
T  35074443 atcaacataaagtagtttt 35074461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 243
Target Start/End: Complemental strand, 45709081 - 45708847
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| |||||||||||||||||||| |||||| ||| |  |||||||||||||||||||| || ||||    
T  45709081 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtaatttttattaatatgacaattatcaaacaaaataatataacat 45708982  T
Q  119 atcattataaagta------atttt---ctgcattcgggacaagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcg 209  Q
    ||||  ||||||||      |||||   | |  || || |  ||||||||||| |||||||||||| |||||||||||| |||||||| |||||| ||||    
T  45708981 atcaacataaagtattttacattttggacgggtttaggtatgagttcggggtgggtacctatatacccgttacccgtccaatacccgtgttttgagatcg 45708882  T
Q  210 g-gaaaactcaaactcaaacccagtcaaaaggagg 243  Q
    | |||||| || ||  |||||||||||||| ||||    
T  45708881 gagaaaacccataccaaaacccagtcaaaacgagg 45708847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 44794246 - 44794114
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| || ||||| |||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  44794246 tcactttcacatttgttagacaaaatgatttagttgatcatttaagtatcaatggtagtttttagtaacatgacaattatcaaacaaaataacataacat 44794147  T
Q  119 atcattataaagtaattttctgcattcgggaca 151  Q
    ||||  ||||| ||||||| | |||| ||||||    
T  44794146 atcaacataaaataattttttacatttgggaca 44794114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 16866043 - 16866247
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||  || |||||||||||||| |||||||||| ||||   |||||||||||||||||||||| ||||    
T  16866043 tcactttcacatttgttagacaaaatgatttagttaatcatttaaatatcaatgatagtttttattaacatggcaattatcaaacaaaataacataacat 16866142  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||||||||||| | |||| |||||              |||||||||| |||||||||||| |||||| |||||||||||||| |||||| |    
T  16866143 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaga 16866242  T
Q  207 tcggg 211  Q
    |||||    
T  16866243 tcggg 16866247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 25905510 - 25905633
Alignment:
Q  28 acatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||||||  ||    
T  25905510 acatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 25905609  T
Q  127 aaagtaattttctgcattcgggac 150  Q
    ||| ||||||| | |||| |||||    
T  25905610 aaaataattttttacatttgggac 25905633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 26004746 - 26004675
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat 84  Q
    |||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  26004746 aatatgctcattttaacatttgttagaccgattgatttagtcgctcctttaaatatcaatggtagtttttat 26004675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 238
Target Start/End: Original strand, 41103517 - 41103762
Alignment:
Q  10 aataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaat---atcaatggtagttttta-taacacaacaattatcaaacaa 105  Q
    ||||||| || |||||||||||||||||||| || ||||||| ||| ||||||||||   |||||||||| ||| || |||||  |||||||||||||||    
T  41103517 aataatacgtccactttaacatttgttagacggaatgatttagttgatcctttaaatatcatcaatggtaatttgtattaacatgacaattatcaaacaa 41103616  T
Q  106 aataacatgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatac 193  Q
    ||||||| || ||||||  ||||| ||||||| | ||||  ||||              |||||||||| |||| ||||||| ||||| |||||||||||    
T  41103617 aataacaagagatatcaacataaaataattttttacatttaggacgggtttatgtatgggttcggggtgggtacttatatacccgttaaccgtcccatac 41103716  T
Q  194 ccgtattttgaaatc-gggaaaactcaaactcaaacccagtcaaaa 238  Q
    |||| |||||||||| |||||||| || || || ||||||||||||    
T  41103717 ccgtgttttgaaatcggggaaaacccatacccacacccagtcaaaa 41103762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 25980135 - 25980018
Alignment:
Q  21 cactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacata 119  Q
    |||||||||||||||||||| || ||||||| ||  |||||||||||||||||  |||||||| |||||  | ||||||||||||||||||||||||||     
T  25980135 cactttaacatttgttagacggaatgatttatttaatcctttaaatatcaatgtaagtttttattaacatgataattatcaaacaaaataacatgacatt 25980036  T
Q  120 tcattataaagtaatttt 137  Q
    |||  ||||| |||||||    
T  25980035 tcaacataaaataatttt 25980018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 43507300 - 43507401
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||| ||||||||||| || ||||||| ||| || |||||||||||||||||||||||| ||| |  |||||||||||||||||||||    
T  43507300 aatatgctcactttaaaatttgttagacggaatgatttagttgatcttttaaatatcaatggtagtttttattaatatgacaattatcaaacaaaataac 43507399  T
Q  112 at 113  Q
    ||    
T  43507400 at 43507401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 17851728 - 17851846
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||| |||||   | ||||||| ||| ||||||||||||||||| |||||||||| ||||  ||||||||||||||||||||||| ||||    
T  17851728 tcactttcacatttattagataaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacat 17851827  T
Q  119 atcattataaagtaatttt 137  Q
    ||||  |||||||| ||||    
T  17851828 atcaacataaagtagtttt 17851846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 44658631 - 44658565
Alignment:
Q  57 tcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacatatca 122  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||    
T  44658631 tcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacatatca 44658565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 3227769 - 3227698
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat 84  Q
    |||||| |||||| |||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||||    
T  3227769 aatatgctcacttcaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttat 3227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 16811644 - 16811735
Alignment:
Q  60 tttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||||||||||||||||| ||||   |||||||||||||||||||||| | ||||||  ||||||||||||| | |||| |||||    
T  16811644 tttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataatatatcaacataaagtaattttttacatttgggac 16811735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 10072486 - 10072544
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||||||||||| |||||||||| |||||||||| |||||||||||||    
T  10072486 gttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggg 10072544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 27063157 - 27063237
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcg-ggaaaactcaaactcaaaccca 231  Q
    ||||||||||| |||| ||||| | ||||| ||||||  ||||||||||||||||||| |||||||||||||||| |||||    
T  27063157 agttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaaactcataccca 27063237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 30839208 - 30839128
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    ||||||||||   ||| ||||| | |||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  30839208 agttcggggtagatacatatatccacgttactcgtcccatacccgtattttgaaatcagggaaaactcaaactcataccca 30839128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 38152776 - 38152892
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacata 119  Q
    ||||||||||||||||||||| || ||||||| ||| ||||||| ||||||||||||||              |||||||||||||||||||||||||||    
T  38152776 tcactttaacatttgttagacggaatgatttagttgatcctttagatatcaatggtagt--------------aattatcaaacaaaataacatgacata 38152861  T
Q  120 tcattataaagtaattttctgcattcgggac 150  Q
    |||  ||||| ||||||| | |||| |||||    
T  38152862 tcaacataaaataattttttacatttgggac 38152892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 3227019 - 3226961
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||||||||| |  |||||||||||||||||||| |||||||||||||    
T  3227019 gttcggggtgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcggg 3226961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 32546212 - 32546274
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||||||| |||| ||||| | |||||||||| || |||||||||||||||||||||||||    
T  32546212 gttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatcgggaaaa 32546274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 37103335 - 37103262
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||||||  |||| ||||| ||  ||||||||||||| |||||||||| |||||||||||    
T  37103335 ttgctcctttaattatcaatgaaagttattatatcatgacaattatcaaaccaaataacatggcatatcattat 37103262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 10072357 - 10072425
Alignment:
Q  14 atatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttt 82  Q
    ||||| ||||||||||||||||||| | || ||||||| ||| || ||||| |||||||||||||||||    
T  10072357 atatgctcactttaacatttgttaggcggaatgatttagttgatcatttaattatcaatggtagttttt 10072425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 3157103 - 3157161
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||| ||| |||||||||| | ||||| ||||||||||||| |||||||||||||||    
T  3157103 gttcggtgtgggtacctatatccccgttatccgtcccatacccatattttgaaatcggg 3157161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 3227093 - 3227047
Alignment:
Q  91 acaattatcaaacaaaataacatgacatatcattataaagtaatttt 137  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||    
T  3227093 acaattatcaaacaaaataacatgacatatcaacataaaataatttt 3227047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 29015167 - 29015093
Alignment:
Q  52 attgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||||| |||||||   |||||||||| ||  ||||||||||||| |||||||||| ||||| |||||    
T  29015167 attgctcctttaactatcaataaaagtttttatatcatgacaattatcaaaccaaataacatgccatataattat 29015093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 35074490 - 35074548
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||| || |||||||||||| ||||||||||||||||||||| |||| | ||||||    
T  35074490 gttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaagatcggg 35074548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 38139865 - 38139811
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaat 207  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||| |||||||||    
T  38139865 gttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaat 38139811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 28309378 - 28309451
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||| || ||||||||   ||| ||||| ||  ||||||||||||| ||||||||||||||||||||||    
T  28309378 ttgctccttcaactatcaatgaatgttcttatatcatgacaattatcaaactaaataacatgacatatcattat 28309451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 33841098 - 33841167
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaa 221  Q
    |||||||||| |||| ||||  |  |||||||||||||||||||| |||||||||| |||||||||||||    
T  33841098 gttcggggtgagtacatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaactcaaa 33841167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 39317027 - 39317088
Alignment:
Q  165 tacctatatactcgttacccgtcccatacccgtattttgaaatcg-ggaaaactcaaactca 225  Q
    ||| ||||||| || |||||||||||||||||| ||||||||||| |||||||||| |||||    
T  39317027 tacatatatacccgctacccgtcccatacccgtgttttgaaatcgaggaaaactcatactca 39317088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 42908088 - 42908035
Alignment:
Q  179 ttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||| |||||    
T  42908088 ttacccgtcccgtacccgtattttgaaatcggggaaaacccaaactcataccca 42908035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 37182305 - 37182373
Alignment:
Q  164 gtacctatatactcgttacccgtcccatacccgtattttgaaatcgg-gaaaactcaaactcaaaccca 231  Q
    |||||||||||| || |||||||||||||||||| ||||||| |||| |||||| || ||||| |||||    
T  37182305 gtacctatatacccgctacccgtcccatacccgtgttttgaattcggagaaaacccatactcataccca 37182373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 126
Target Start/End: Original strand, 21750709 - 21750744
Alignment:
Q  91 acaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||||| ||||||||||||||||||||||    
T  21750709 acaattatcaaaccaaataacatgacatatcattat 21750744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 21750801 - 21750864
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||| |||| |||| ||||| | ||| ||||||| |||| ||||||||||||||||||||||    
T  21750801 agttcgaggtgggtacatatatccccgtcacccgtctcatatccgtattttgaaatcgggaaaa 21750864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 25782981 - 25782895
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgg-gaaaactcaaactcaaacccagtcaaaa 238  Q
    ||||||||||| |||||||||||| | ||| ||||| ||||||||| ||||  |||||| |||||| |||||| ||||||| ||||||    
T  25782981 agttcggggtgggtacctatatacccattatccgtctcatacccgtgttttataatcggagaaaacccaaact-aaacccaatcaaaa 25782895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 27063353 - 27063412
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||||||| |||| ||||| | ||||||||||||| |||||||||| | ||||||||    
T  27063353 agttcggggtgggtacatatattcccgttacccgtcccgtacccgtattattaaatcggg 27063412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 29014995 - 29014952
Alignment:
Q  183 ccgtcccatacccgtattttgaaatcggg-aaaactcaaactca 225  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||    
T  29014995 ccgtcccgtacccgtattttgaaatcgggaaaaactcaaactca 29014952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 126
Target Start/End: Original strand, 31425931 - 31425966
Alignment:
Q  91 acaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||||| ||||||||||||||||||||||    
T  31425931 acaattatcaaaccaaataacatgacatatcattat 31425966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 26874232 - 26874306
Alignment:
Q  12 taatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataa 86  Q
    |||||||||| |||||||||||  | |||| | ||||||  |||||||||||||||||||||  | |||||||||    
T  26874232 taatatgttcgctttaacatttccttgaccaaatgatttgcttgctcctttaaatatcaatgacactttttataa 26874306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 31426028 - 31426086
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||||||  ||| ||||| | ||||||||||| |||||||||||||| ||||||||    
T  31426028 gttcggggtggatacatatatccccgttacccgtctcatacccgtatttttaaatcggg 31426086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 37103184 - 37103138
Alignment:
Q  169 tatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||||| |||||||||| |||| |||||||||||||||||| ||||||    
T  37103184 tatatcctcgttacccttcccgtacccgtattttgaaatcaggaaaa 37103138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 38152907 - 38152965
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||||||||||  ||||| |||| |||||||| | |||||||||||||    
T  38152907 gttcggggtgggtacctatatagccgttatccgttccatacccatgttttgaaatcggg 38152965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 17120543 - 17120624
Alignment:
Q  23 ctttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaaca 104  Q
    ||||||||||| || |||||  |||||| ||||||| ||||||||||||||  |  ||||||||||   |||||||||||||    
T  17120543 ctttaacatttttttgaccggatgatttgattgctcatttaaatatcaatgacaaattttataacatgtcaattatcaaaca 17120624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 17885498 - 17885543
Alignment:
Q  166 acctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| ||||||||||||||||||| | |||| ||||||||    
T  17885498 acctatatacccgttacccgtcccatacccatgttttaaaatcggg 17885543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 18684019 - 18684052
Alignment:
Q  178 gttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||||| |||||||||||||||||||||    
T  18684019 gttacccgtcccgtacccgtattttgaaatcggg 18684052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 22973434 - 22973487
Alignment:
Q  179 ttacccgtcccatacccgtattttgaaatcg-ggaaaactcaaactcaaaccca 231  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||| || |||||    
T  22973434 ttacccgtcccgtacccgtattttgaaatcgtggaaaacccaaacccataccca 22973487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 27062472 - 27062399
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||||  |||||||  | || ||||| || || ||||||||||| ||||||||||| ||||||||||    
T  27062472 ttgctcctttaaccatcaatgaaaattcttatatcataataattatcaaaccaaataacatgatatatcattat 27062399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 43507470 - 43507523
Alignment:
Q  158 gggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||| || ||||||||| ||||||||||| ||||||| | |||||||||||||    
T  43507470 gggtgggtgcctatatacccgttacccgtctcatacccatgttttgaaatcggg 43507523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 10990908 - 10990876
Alignment:
Q  179 ttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||||||| |||||||||||||||||||||    
T  10990908 ttacccgtcccgtacccgtattttgaaatcggg 10990876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 10995882 - 10995834
Alignment:
Q  178 gttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactca 225  Q
    |||||||||||||||||||| | |||||||| |||||||| ||||||||    
T  10995882 gttacccgtcccatacccgtgtcttgaaatcggggaaaacccaaactca 10995834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 17851874 - 17851918
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgt 197  Q
    ||||||| || |||||||||||  |||||||||||||||||||||    
T  17851874 gttcgggatgggtacctatatatccgttacccgtcccatacccgt 17851918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 25905648 - 25905699
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttga 204  Q
    ||||||||||| |||||||| ||| |||||||||||||||||| || ||||||    
T  25905648 agttcggggtg-gtacctatgtacccgttacccgtcccatacctgtgttttga 25905699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 28309511 - 28309567
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc 208  Q
    ||||||||||   ||| ||||| | ||||||||||||| ||||||||||||||||||    
T  28309511 agttcggggtagatacatatattcccgttacccgtcccgtacccgtattttgaaatc 28309567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 41741512 - 41741444
Alignment:
Q  164 gtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    ||||||| |||| ||||| ||||| ||||||||| |||||||||| |||||||| || ||||| |||||    
T  41741512 gtacctacatacccgttatccgtctcatacccgtgttttgaaatcggggaaaacccatactcataccca 41741444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 33256 - 33487
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  33256 aatatgtttactttaacaattgttagaccgattgatttagttgttcctttaaatatcaatcgtagtttttataacacaacaattaccaaacaaaataaca 33355  T
Q  113 tgacatatcattataaagtaattttctgcattcgggacaa------------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    || ||| |||  |||||||| ||||||||||||||||| |            |||||||||| |||| ||||||| ||||||||||||||||||||| ||    
T  33356 tggcatgtcaacataaagtagttttctgcattcgggacgagtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgtt 33455  T
Q  201 ttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    |||||||| |||||||| ||||| || |||||    
T  33456 ttgaaatcggggaaaacccaaacccataccca 33487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 2412952 - 2412810
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  2412952 aatatgctcactttaatatttgttagaccgattaatttagttgctcctttaaatatcaattgtagtttttatgacacaacaattatcaaacaaaataaca 2412853  T
Q  113 tgacatatcattataaagtaattttctgcattcgggacaagtt 155  Q
    |||||||||| |||||||||||||||||||| |||||| ||||    
T  2412852 tgacatatcaatataaagtaattttctgcatacgggacgagtt 2412810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 3573087 - 3573223
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  3573087 aatatgctcactttaacatttgttagaccgattgatttagttgctcctttgaatatcaatggtagtttttataacacgacaattatcaaacagaataaca 3573186  T
Q  113 tgacatatcattataaagtaattttctgcattcggga 149  Q
    ||||||||||  ||||| ||||||||| |||||||||    
T  3573187 tgacatatcaacataaaataattttctacattcggga 3573223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 2985010 - 2985136
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  2985010 aatatgctcactttaatatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacaacaattatcaaataaaataaca 2985109  T
Q  113 tgacatatcattataaagtaattttct 139  Q
    |||||||||| |||||| |||||||||    
T  2985110 tgacatatcaatataaaataattttct 2985136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 12447244 - 12447370
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12447244 aatatattcactttaacatttgttagatcgattgatttaactgctcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaaataaca 12447343  T
Q  113 tgacatatcattataaagtaattttct 139  Q
    |||||||| |  |||||||| ||||||    
T  12447344 tgacatattaacataaagtagttttct 12447370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 27088577 - 27088445
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  27088577 aatatgcttactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacataacaattatcaaacaaaataaca 27088478  T
Q  113 tgacatatcattataaagtaattttctgcattcg 146  Q
    | ||||||||  ||||| ||||||||| ||||||    
T  27088477 t-acatatcaacataaaataattttctacattcg 27088445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 202
Target Start/End: Complemental strand, 35194215 - 35194014
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35194215 aatatgttcactttaacattttttagaccaattgatttagtttattctttaaatatcaatggtagtttttataacacagcaattatcaaacaaaataaca 35194116  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    |  ||||| |  ||||||||||||||| ||||||||||             |||| |||||| |||||||||||| ||||||||||||||||||||| ||    
T  35194115 tagcatattaacataaagtaattttctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgtcccatacccgtgtt 35194016  T
Q  201 tt 202  Q
    ||    
T  35194015 tt 35194014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 4582981 - 4583192
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||| ||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  4582981 aatatgctcactttaacatttgatagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 4583080  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    |||||||||||  ||||||||||||| | |||| |||||              ||| |||||| | |||||||||| ||||||||||||||||||||| |    
T  4583081 atgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgt 4583180  T
Q  200 tttgaaatcggg 211  Q
    ||||||||||||    
T  4583181 tttgaaatcggg 4583192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 30115346 - 30115483
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||||||||||||||| ||| |||||| |||||||||||||||| |||||| |||||||||||||  |||||||||||||||||||||    
T  30115346 aatatgctcactttaacatttgttagactgatcgatttagttgctcctttaaatataaatggtggtttttataacacggcaattatcaaacaaaataaca 30115445  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    |  |||||||  ||||| ||||||| ||||||||||||    
T  30115446 tagcatatcaacataaaataattttatgcattcgggac 30115483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 17853518 - 17853381
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  17853518 aatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 17853419  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    || ||||||||  ||||||||||||| | |||| |||||    
T  17853418 at-acatatcaacataaagtaattttttacatttgggac 17853381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 211
Target Start/End: Complemental strand, 20973718 - 20973512
Alignment:
Q  7 tcgaataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaa 105  Q
    ||||| |||| | ||||||||| |||| |||||| || ||||||| ||| | ||||| |||||||||||||||||||| ||||  |||||||||||||||    
T  20973718 tcgaacaatacgctcactttaatattttttagacggaatgatttagttgatactttacatatcaatggtagtttttattaacatgacaattatcaaacaa 20973619  T
Q  106 aataacatgacatatcattataaagtaattttctgcattcggg-acaagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttga 204  Q
    |||| ||||||||||||  ||||||||||||| | |||| ||| |   |||||||||| |||||||||||| |||||||| |||||||||||| |||  |    
T  20973618 aataccatgacatatcaacataaagtaattttttacatttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttgaa 20973519  T
Q  205 aatcggg 211  Q
    |||||||    
T  20973518 aatcggg 20973512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 33862409 - 33862273
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||||||||||||||||||||||| || ||||||||| ||| || ||||||||||||| |||||||||| ||||  ||||||||||||||||||||||    
T  33862409 aatatgttcactttaacatttgttagccc-attgatttagttggtcatttaaatatcaatcgtagtttttacaacatgacaattatcaaacaaaataaca 33862311  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    || |||||||  ||||| || |||||||||||||||||    
T  33862310 tggcatatcaacataaaatagttttctgcattcgggac 33862273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 28045517 - 28045656
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta--taacacaacaattatcaaacaaaataa 110  Q
    ||||||||||||||||||||||||||||  | ||||||| ||| ||||||||||||||||| |||||||||  ||||| ||||||||| |||||||||||    
T  28045517 aatatgttcactttaacatttgttagacgtaatgatttagttgatcctttaaatatcaatgatagtttttatttaacataacaattataaaacaaaataa 28045616  T
Q  111 catgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||||  ||||||||||||| | |||| |||||    
T  28045617 catgacatatcaacataaagtaattttttacatttgggac 28045656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 38006684 - 38006558
Alignment:
Q  24 tttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcat 123  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| || || ||||||||||||||||||||||||||| |     
T  38006684 tttaacaattgttagaccaattgatttagttgctcctttaaatatcaatggtggtttttataatacgactattatcaaacaaaataacatgacatattaa 38006585  T
Q  124 tataaagtaattttctgcattcgggac 150  Q
     ||||| ||||||||  ||||||||||    
T  38006584 cataaattaattttcaacattcgggac 38006558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 1218619 - 1218755
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  1218619 aatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttttaacatgacaattatcaaacaaaataaca 1218718  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    | ||| ||||  ||||||||||||| | |||| |||||    
T  1218719 t-acaaatcaacataaagtaattttttacatttgggac 1218755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 210
Target Start/End: Original strand, 15890069 - 15890278
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    ||||||||||||||||||||||||||||  | | ||||||||| ||||| ||||||||||||||||||| | ||| |  |||||||||||| ||||||||    
T  15890069 aatatgttcactttaacatttgttagacgtaattatttaattgatccttcaaatatcaatggtagttttcattaatatgacaattatcaaataaaataac 15890168  T
Q  112 atgacatatcattataaagtaattttctgcattcgggacaagt-----------tcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    |||||||||||  ||||||||||||| | |||| |||||  ||           |  ||||| |||||||||||| ||||||||||||||||||||| ||    
T  15890169 atgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcgggtgggtacctatatacccgttacccgtcccatacccgtgtt 15890268  T
Q  201 ttgaaatcgg 210  Q
    ||||||||||    
T  15890269 ttgaaatcgg 15890278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 18206888 - 18207019
Alignment:
Q  21 cactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaac-aattatcaaacaaaataacatgacata 119  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||  | |||||| ||||||||||||||| ||||    
T  18206888 cactttaatatttgttagaccgattgatttagttgctcctttaaatatcattagtagtttttataacacggcaaattattaaacaaaataacatggcata 18206987  T
Q  120 tcattata-aagtaattttctgcattcgggac 150  Q
    |||  ||| |||||||||||| ||||||||||    
T  18206988 tcaacatagaagtaattttctacattcgggac 18207019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 35311685 - 35311822
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  35311685 aatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 35311784  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    || ||||||||  ||||| ||||||| | |||| |||||    
T  35311785 at-acatatcaacataaaataattttttacatttgggac 35311822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 3564954 - 3564830
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||||||||| || ||||||| ||| ||||||||||||||||| ||||||||| |||||  |||||||||||||||||||||    
T  3564954 aatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataac 3564855  T
Q  112 atgacatatcattataaagtaatttt 137  Q
    || ||||||||  |||||||||||||    
T  3564854 at-acatatcaacataaagtaatttt 3564830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 211
Target Start/End: Original strand, 4920685 - 4920899
Alignment:
Q  10 aataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaat 108  Q
    ||||||| | ||||||| |||||||||||||  | ||||||| ||| || |||||||||||||||||||||||| |||||  ||||||||||||||||||    
T  4920685 aataataagctcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaat 4920784  T
Q  109 aacatgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccg 196  Q
    ||||| ||||||||  ||||||||||||| | |||| |||||              ||||||||||  ||||||||||| ||||||||||||||||||||    
T  4920785 aacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccg 4920884  T
Q  197 tattttgaaatcggg 211  Q
    | |||||| ||||||    
T  4920885 tgttttgagatcggg 4920899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 29246178 - 29246053
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||||||||| || ||||||||||| | | |||||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  29246178 aatatgctcactttaacatttgttagacggaatgatttaattgattcattaaatatcaatggtagtgtttattaacataacaattatcaaacaaaataac 29246079  T
Q  112 atgacatatcattataaagtaatttt 137  Q
    |||||||| ||  ||||| |||||||    
T  29246078 atgacataccaacataaaataatttt 29246053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 42717849 - 42717721
Alignment:
Q  22 actttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatc-aaacaaaataacatgacatat 120  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||||||| ||||||||||||||| ||||||||| |||||||||| |||| ||| |    
T  42717849 actttaacatttgttagaccggttgatttagtttctcctttaaatatcaatgatagtttttataacacgacaattatcaaaacaaaatatcatggcatgt 42717750  T
Q  121 cattataaagtaattttctgcattcgggac 150  Q
    ||  || |||||||||||||||||| ||||    
T  42717749 caacat-aagtaattttctgcattcaggac 42717721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 8453599 - 8453386
Alignment:
Q  12 taatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataac 111  Q
    ||||||| ||| ||||||||||||| |||||| ||||||| || ||||||||||||||||||||| |||||||||||  |||||||| ||||||||||||    
T  8453599 taatatgctcattttaacatttgtttgaccgaatgatttagttactcctttaaatatcaatggtaatttttataacatgacaattattaaacaaaataac 8453500  T
Q  112 atgacatatcattataaagtaattttctgcattcgggacaag-------------ttcggggtgtgtacctatatactcgttacccgtcccatacccgta 198  Q
      ||||||| |  ||||| ||||||||| |||| ||||| ||             || ||||||||||||||||||   ||||||| ||||||||||||     
T  8453499 --gacatattaacataaactaattttctacatttgggacgagttttgagtatgactttggggtgtgtacctatatatctgttacccatcccatacccgtg 8453402  T
Q  199 ttttgaaatcgggaaa 214  Q
    ||||||||||||||||    
T  8453401 ttttgaaatcgggaaa 8453386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 6156145 - 6156019
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||||||||| || ||||||| ||||||||||||||||||||| || |||||| || ||  |||||||||||||||||||||    
T  6156145 aatatgctcactttaacatttgttagacggaatgatttatttgctcctttaaatatcaatgatattttttattaccatgacaattatcaaacaaaataac 6156046  T
Q  112 atgacatatcattataaagtaattttc 138  Q
    ||| ||||| |  ||||||||||||||    
T  6156045 atgtcatataaacataaagtaattttc 6156019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 5908908 - 5908695
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  5908908 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 5908809  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||||||||||| | |||| |||||              ||| ||||||||||| ||||||| ||||||||||||||||||||| ||| || |    
T  5908808 atcaacataaagtaattttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgtttcgaga 5908709  T
Q  207 tc-gggaaaactca 219  Q
    || |||||||||||    
T  5908708 tcggggaaaactca 5908695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 13402229 - 13402092
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||| |||||||||||||||||  | ||||||| ||| |||||||||||||||| |||||||||| |||||  |||||||||||||||||||||    
T  13402229 aatatgctcattttaacatttgttagacgaaatgatttagttgatcctttaaatatcaatagtagtttttattaacatgacaattatcaaacaaaataac 13402130  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    || ||||||||  ||||||||||||| | |||| |||||    
T  13402129 at-acatatcaacataaagtaattttttacatttgggac 13402092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 40517675 - 40517793
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  40517675 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 40517774  T
Q  119 atcattataaagtaatttt 137  Q
    ||||  ||||| |||||||    
T  40517775 atcaacataaaataatttt 40517793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 12866779 - 12866558
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||||||||||||  |   ||||||||| || || ||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  12866779 aatatgctcactttaacatttgttagacgtaacaatttaattgatcattcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 12866680  T
Q  112 at-gacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgta 198  Q
    || |||||||||  ||||||||||||| | |||| |||||              ||||| |||| ||||||||||||  |||||||||||||||||| |     
T  12866679 atagacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatg 12866580  T
Q  199 ttttgaaatcgg-gaaaactca 219  Q
    |||||||||||| |||||||||    
T  12866579 ttttgaaatcggagaaaactca 12866558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 22695121 - 22694912
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | |||| || ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  22695121 tcactttcacatttgttagacaaaatgatatagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacattacat 22695022  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||| ||||||| | |||| |||||              |||||||||| |||||| ||||| |||||  ||||||||||||||||||||| |    
T  22695021 atcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctctatacccgttagtcgtcccatacccgtattttgaga 22694922  T
Q  207 tcgggaaaac 216  Q
    ||||| ||||    
T  22694921 tcggggaaac 22694912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 231
Target Start/End: Original strand, 30996466 - 30996690
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||||||||| ||||||| || ||||||| ||| ||||||||||||||| ||||||||||| |||||  |||||||||||||||||||||||| |||    
T  30996466 tcactttaacatt-gttagacggaatgatttatttgatcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaataacatggcat 30996564  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||   |||||||||||| | |||| |||||              |||||||||| |||||||||||| ||||||| ||||||||| ||| |||| |||    
T  30996565 atcaacttaaagtaattttttacatttgggacgggtttgggtgtgtgttcggggtgggtacctatatacccgttacctgtcccatactcgtgttttaaaa 30996664  T
Q  207 tcgg-gaaaactcaaactcaaaccca 231  Q
    |||| |||||| || ||||| |||||    
T  30996665 tcggagaaaacccatactcataccca 30996690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 12834802 - 12834663
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||||||||||||  |  |||||||||| || || ||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  12834802 aatatgctcactttaacatttgttagacgtaacgatttaattgatcattcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 12834703  T
Q  112 at-gacatatcattataaagtaattttctgcattcgggac 150  Q
    || |||||||||  ||||| ||||||| | |||| |||||    
T  12834702 atagacatatcaacataaattaattttttacatttgggac 12834663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 42987699 - 42987568
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||| ||||    
T  42987699 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacat 42987600  T
Q  119 atcattataaagtaattttctgcattcgggac 150  Q
    ||||  ||||| ||||||| | |||| |||||    
T  42987599 atcaacataaaataattttttacatttgggac 42987568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 6092728 - 6092607
Alignment:
Q  30 atttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacatatcattataa 128  Q
    |||||||||||  | ||||||| ||| |||||||||||||||||||||||||||| ||||   |||||||||||||||||||||| ||||||||  ||||    
T  6092728 atttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaacataa 6092629  T
Q  129 agtaattttctgcattcgggac 150  Q
    ||||||||| | |||| |||||    
T  6092628 agtaattttttacatttgggac 6092607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 27302959 - 27302837
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||||||||||||||  || ||||||| ||| ||||||||||||||||||||    |  |||||  ||||||||||||||||||||||    
T  27302959 aatatgatcactttaacatttgttagatggaatgatttagttgatcctttaaatatcaatggta--cgtagtaacatgacaattatcaaacaaaataaca 27302862  T
Q  113 tgacatatcattataaagtaatttt 137  Q
    |||||||| |  |||||||||||||    
T  27302861 tgacatattaacataaagtaatttt 27302837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 6369566 - 6369777
Alignment:
Q  21 cactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacata 119  Q
    |||||||||||||||||||| || ||||||| ||| || |||||| ||||| ||||||||| | |||||  | |||||||||||||||||||| |||  |    
T  6369566 cactttaacatttgttagacggaatgatttagttgatcttttaaacatcaacggtagttttcattaacatgataattatcaaacaaaataacacgacgca 6369665  T
Q  120 tcattataaagtaattttctgcatt-----cgggacaa-------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaat 207  Q
    |||  ||||||||||||| | ||||     ||||  ||       |||||||||| |||| ||||||| |||||||| |||||||| |||||||||||||    
T  6369666 tcaacataaagtaattttttacattttggacgggttaaagtatgggttcggggtgggtacatatatacacgttaccc-tcccatactcgtattttgaaat 6369764  T
Q  208 c-gggaaaactca 219  Q
    | |||||||||||    
T  6369765 cagggaaaactca 6369777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 33420494 - 33420440
Alignment:
Q  75 tagtttttataacacaacaattatcaaacaaaataacatgacatatcattataaa 129  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  33420494 tagtttttataacacgacaattatcaaataaaataacatgacatatcaatataaa 33420440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 15564577 - 15564641
Alignment:
Q  91 acaattatcaaacaaaataacatgacatatcattataaagtaattttctgcattcgggacaagtt 155  Q
    |||||| ||||| ||||||||||||||||||| | |||||||||||||| |||||||||| ||||    
T  15564577 acaattttcaaaaaaaataacatgacatatcaatgtaaagtaattttctacattcgggacgagtt 15564641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 28569095 - 28569016
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    |||||||||| |||||||||| | ||||||||||||| |||||| ||||||||||| |||||||  |||||||| |||||    
T  28569095 gttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaaactcataccca 28569016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 33728076 - 33728017
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||| |||||| |||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  33728076 agtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggg 33728017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 20634065 - 20634134
Alignment:
Q  57 tcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||| ||||||||  |||| ||||| ||  ||||||||||||| ||||||||||||||||||||||    
T  20634065 tcctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattat 20634134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 20650179 - 20650248
Alignment:
Q  57 tcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||| ||||||||  |||| ||||| ||  ||||||||||||| ||||||||||||||||||||||    
T  20650179 tcctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattat 20650248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 34259145 - 34259214
Alignment:
Q  57 tcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||| ||||||||  |||| ||||| ||  ||||||||||||| ||||||||||||||||||||||    
T  34259145 tcctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattat 34259214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 10126977 - 10127041
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat 84  Q
    ||||||| |||||||||||||  | ||||||| ||| || |||||||||||||||||||||||||    
T  10126977 tcactttcacatttgttagacaaaatgatttagttgatcttttaaatatcaatggtagtttttat 10127041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 38006543 - 38006489
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaat 207  Q
    |||||||||| |||||||||||   ||||| ||||||||||||||||||||||||    
T  38006543 gttcggggtgggtacctatatatctgttacgcgtcccatacccgtattttgaaat 38006489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 38972937 - 38972999
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||||||| |||||||||| | |||||||  |||||||||| | |||||||||||||||||    
T  38972937 gttcggggtgggtacctatattcccgttacctatcccatacccatgttttgaaatcgggaaaa 38972999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 2681101 - 2681170
Alignment:
Q  57 tcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||| ||||||||  |||| ||||  ||  ||||||||||||| ||||||||||||||||||||||    
T  2681101 tcctttaactatcaatgaaagttcttatttcatgacaattatcaaaccaaataacatgacatatcattat 2681170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 2985163 - 2985232
Alignment:
Q  154 ttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgg-gaaaactcaaac 222  Q
    |||||| || |||||||||||| |||||||||||||| |||| | | |||||||||| ||||||||||||    
T  2985163 ttcgggatgagtacctatatacccgttacccgtcccaaacccatgtcttgaaatcggagaaaactcaaac 2985232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 12915353 - 12915426
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||||  |||||||  |||| ||||| ||  ||||| ||||||| ||||||||||||||||||||||    
T  12915353 ttgctcctttaaccatcaatgaaagttcttatatcatgacaatcatcaaaccaaataacatgacatatcattat 12915426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 35311837 - 35311894
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgg 210  Q
    |||||| ||| |||||||||||   |||||||||||||||||||| ||||||||||||    
T  35311837 gttcggagtgggtacctatatatctgttacccgtcccatacccgtgttttgaaatcgg 35311894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 27900464 - 27900413
Alignment:
Q  164 gtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||||||| | | ||||||||||||||||| | |||||||||||||||||    
T  27900464 gtacctatatccacattacccgtcccatacccatgttttgaaatcgggaaaa 27900413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 29246021 - 29245958
Alignment:
Q  157 ggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgg-gaaaactca 219  Q
    |||||| ||||||||||||  ||||  |||||||||||||| |||||||||||| |||||||||    
T  29246021 ggggtgggtacctatatacatgttattcgtcccatacccgtgttttgaaatcggagaaaactca 29245958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 12250855 - 12250925
Alignment:
Q  56 ctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||| ||||||||  |||| ||||| ||  ||||||||||||| |||||| ||| |||||||||||    
T  12250855 ctcctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataatatggcatatcattat 12250925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 12773871 - 12773821
Alignment:
Q  177 cgttacccgtcccatacccgtattttgaaatcgg-gaaaactcaaactcaa 226  Q
    ||||| ||||||| |||||||||||||||||||| |||||| |||||||||    
T  12773871 cgttatccgtcccgtacccgtattttgaaatcggagaaaacccaaactcaa 12773821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 13402078 - 13402016
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||| ||| ||||||| |||| |||||||||| |||||||||| |||  ||||||||||||    
T  13402078 gttcggagtgggtacctaaatacccgttacccgttccatacccgtgtttgaaaatcgggaaaa 13402016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 23045065 - 23045007
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||| |||||   |||||||| |||| |||||||||||||||||||||    
T  23045065 gttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggg 23045007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 34259270 - 34259340
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcg-ggaaaactcaaac 222  Q
    |||| ||||| |||| ||||| ||||||||||||||  ||||| ||||||||||||| |||||| ||||||    
T  34259270 gttcagggtgggtacatatatcctcgttacccgtccggtacccatattttgaaatcgaggaaaattcaaac 34259340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 40517821 - 40517871
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttg 203  Q
    |||||||||| ||| |||||||| |||||||| |||||||||||| |||||    
T  40517821 gttcggggtgggtaactatatacccgttacccatcccatacccgtgttttg 40517871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 6810173 - 6810246
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactca 225  Q
    |||||||||| |||| ||||| |||||||||||| || ||||||| || | ||||| |||||||| ||||||||    
T  6810173 gttcggggtgagtacttatatcctcgttacccgttccgtacccgtgttctaaaatcggggaaaacccaaactca 6810246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 10822600 - 10822543
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgg 210  Q
    |||||||||| |||| ||||  | |||||||||||| |||||||| ||||||||||||    
T  10822600 gttcggggtgggtacatataaccccgttacccgtcctatacccgtgttttgaaatcgg 10822543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 12712607 - 12712558
Alignment:
Q  177 cgttacccgtcccatacccgtattttgaaatcgg-gaaaactcaaactca 225  Q
    ||||| ||||||| |||||||||||||||||||| |||||| ||||||||    
T  12712607 cgttatccgtcccgtacccgtattttgaaatcggagaaaacccaaactca 12712558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 23045199 - 23045126
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||| |||||| |||||| |  |||| ||||| ||  ||||||||||||| |||||| |||||||||||||||    
T  23045199 ttgctgctttaactatcaacgaaagttcttatatcatgacaattatcaaaccaaataagatgacatatcattat 23045126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 27302808 - 27302751
Alignment:
Q  154 ttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||||| ||||||||||| | |||| ||||| |||| |||| |||||||||||||    
T  27302808 ttcggggtgggtacctatatatttgttatccgtctcatatccgtgttttgaaatcggg 27302751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 28045675 - 28045732
Alignment:
Q  158 gggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||||| |||||||||||| ||||||||||||||||  ||| ||||||| | |||||||    
T  28045675 gggtgggtacctatatacccgttacccgtcccatattcgtgttttgaattagggaaaa 28045732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 18207038 - 18207106
Alignment:
Q  158 gggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcg-ggaaaactcaaactca 225  Q
    ||||| ||||||||||||  |||||| ||||||||| ||  ||||||||||| ||||||| ||||||||    
T  18207038 gggtgggtacctatatacctgttacctgtcccatacacgagttttgaaatcgaggaaaacccaaactca 18207106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 6e-52; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 31942411 - 31942280
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31942411 aatatgttcactttaacatttgttagaccgactgatttagttgctcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaaataaca 31942312  T
Q  113 tgacatatcattataaagtaattttctgcatt 144  Q
    || |||||||  |||||||| |||||||||||    
T  31942311 tggcatatcagcataaagtagttttctgcatt 31942280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 37106562 - 37106766
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  37106562 aatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 37106661  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaa 205  Q
    || | ||||||  ||||||||||||| | |||| |||||        |||||| ||| |||||||||||| ||||||||||||||||||||| |||||||    
T  37106662 at-atatatcaacataaagtaattttttacatttgggacgggtatgggttcggagtgggtacctatatacccgttacccgtcccatacccgtgttttgaa 37106760  T
Q  206 atcggg 211  Q
    ||||||    
T  37106761 atcggg 37106766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 14540649 - 14540782
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||    |||||||||||||||| ||||||||||||||||||||||    
T  14540649 aatatgctcactttaacatttgttagactgattgatttagttgctcctttaaatatc----gtagtttttataacacgacaattatcaaacaaaataaca 14540744  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||  ||||||||||||||| | ||||||||    
T  14540745 tgacatatcaacataaagtaattttctacgttcgggac 14540782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 19105066 - 19104929
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||||||||||||||||||||||||| |||||| |||||| |||||||||| || ||||||||||||||||  ||||||| |||||||||||||    
T  19105066 aatatgctcactttaacatttgttagaccgatcgatttagttgctcttttaaatatcgatagtagtttttataacacggcaattattaaacaaaataaca 19104967  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    |||||  |||  ||||||||||||||||||||||||||    
T  19104966 tgacacgtcaacataaagtaattttctgcattcgggac 19104929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 204
Target Start/End: Complemental strand, 16226952 - 16226759
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||| ||||||||||||||| ||||||| ||||||||| |||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  16226952 aatatattcactttaacatttcttagaccaattgatttagttgctaatttaaatatcaatggtagtttttataacacgacaattatcaaataaaataaca 16226853  T
Q  113 tgacatatcattataaagtaattttctgcattcgggacaagttcggg---gtgtgtacctatatactcgttacccgtcccatacccgtattttga 204  Q
    ||||| ||||  || |||| | ||||||||||| | ||  ||| |||   | | |||||||||||| ||||||||||||||||||| | ||||||    
T  16226852 tgacaaatcaacatgaagt-agtttctgcattccgaacgggtttgggtatgagagtacctatatacccgttacccgtcccatacccttgttttga 16226759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 6028108 - 6027977
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtag-tttttataacacaacaattatcaaacaaaataacatgacat 118  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| | |    
T  6028108 tcactttaacatttgttagaccaattgatttagttgctcctttaaatatcaatgatagttttttataacacgacaattatcaaacaaaataacatggctt 6028009  T
Q  119 atcattataaagtaattttctgcattcgggac 150  Q
    ||||  ||||| || |||||||||||| ||||    
T  6028008 atcaacataaaatacttttctgcattcaggac 6027977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 12194053 - 12193915
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||||||||||||||||||||| || |||| || ||| ||||||||||||||||||||||||||| |||||  | |||||||||||||||||||    
T  12194053 aatatgttcactttaacatttgttagacggaatgatgtagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaaaataac 12193954  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    |||||||||||  ||||||||||||| | |||| |||||    
T  12193953 atgacatatcaacataaagtaattttttacatttgggac 12193915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 13705580 - 13705367
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    |||||||||||||||||| || || ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  13705580 tcactttaacatttgttatacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacat 13705481  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  |||||||||||||   |||| |||||              |||||||||| |||||||||||| ||||||| ||| ||||||||| ||||||||    
T  13705480 atcaacataaagtaatttttcacatttgggacgggtttaggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaaa 13705381  T
Q  207 tc-gggaaaactca 219  Q
    || |||||||||||    
T  13705380 tcggggaaaactca 13705367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 45256686 - 45256824
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||| ||||||||||||||||||||||| || ||||||| ||| |||||||||||||||||||| |||||| |||||  |||||||||||||||||||||    
T  45256686 aatacgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtaatttttattaacatgacaattatcaaacaaaataac 45256785  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    | |||||||||  ||||||||||||| | |||| |||||    
T  45256786 aagacatatcaaaataaagtaattttttacatttgggac 45256824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 247
Target Start/End: Original strand, 37999353 - 37999594
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| | ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  37999353 tcactttcacatttgttagacaaaatgatttagttgattctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 37999452  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||||||||||| | |||| |||||             ||||||||||| |||| ||||||| ||||||||||| ||||||||| |||||| |    
T  37999453 atcaacataaagtaattttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttgaga 37999552  T
Q  207 tc-gggaaaactcaaactcaaacccagtcaaaaggagggaaa 247  Q
    || |||||||| || || || |||||||||||| | ||||||    
T  37999553 tcggggaaaacccatacccatacccagtcaaaatgggggaaa 37999594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 45115428 - 45115641
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    |||||||||||||| ||||||  | ||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  45115428 tcactttaacatttattagacaaaatgatttaattgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacat 45115527  T
Q  119 atcattataaagtaattttctgcattcggga------caa------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  |||| |||||||| | |||| ||||       ||      ||||||| || ||||||||||||  |||||||||| ||||||||| ||||||||    
T  45115528 atcaacataatgtaattttttacatttgggatgggtttaactatgggttcgggatgggtacctatatacctgttacccgtctcatacccgtgttttgaaa 45115627  T
Q  207 tcg-ggaaaactca 219  Q
    ||| ||||||||||    
T  45115628 tcgaggaaaactca 45115641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 42798208 - 42798090
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  42798208 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 42798109  T
Q  119 atcattataaagtaatttt 137  Q
    ||||  |||||||||||||    
T  42798108 atcaacataaagtaatttt 42798090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 37472955 - 37472854
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  37472955 aatatgctcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 37472856  T
Q  112 at 113  Q
    ||    
T  37472855 at 37472854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 13830606 - 13830738
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| | |||  ||||||||||||||||||||||| ||||    
T  13830606 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttatttacatgacaattatcaaacaaaataacataacat 13830705  T
Q  119 atcattataaagtaattttctgcattcgggaca 151  Q
    ||||  ||||||||||||| | |||| ||||||    
T  13830706 atcaacataaagtaattttttacatttgggaca 13830738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 10920515 - 10920646
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||| ||||    
T  10920515 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacat 10920614  T
Q  119 atcattataaagtaattttctgcattcgggac 150  Q
    ||||  ||||||||||||| | |||| |||||    
T  10920615 atcaacataaagtaattttttacatttgggac 10920646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 211
Target Start/End: Complemental strand, 7314866 - 7314663
Alignment:
Q  21 cactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacata 119  Q
    |||||||||||||| ||||| || ||||||| ||| ||||||||||||||||| ||||||||| |||||  | | |||||||||||||||||||||||||    
T  7314866 cactttaacatttgatagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgatatttatcaaacaaaataacatgacata 7314767  T
Q  120 tcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaat 207  Q
    |||  ||||| ||||||| | |||| |||||              |||||||||| | |||||||||| ||||||||||||||||| |||||||| ||||    
T  7314766 tcaacataaaataattttttacatttgggacgggtgtgggtatgggttcggggtgggaacctatatacccgttacccgtcccatactcgtattttaaaat 7314667  T
Q  208 cggg 211  Q
    ||||    
T  7314666 cggg 7314663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 44746335 - 44746197
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataa-cacaacaattatcaaacaaaataac 111  Q
    |||||| ||||| ||||||||||||||| || | ||||| ||||||||||||||||||||| |||||||||||| ||  ||||| |||||| ||||||||    
T  44746335 aatatgctcactctaacatttgttagacggaataatttatttgctcctttaaatatcaatgatagtttttataaccattacaatgatcaaataaaataac 44746236  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||| |||||||  ||||||| ||||||| |||| |||||    
T  44746235 atggcatatcaagataaagtgattttctacatttgggac 44746197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 36128333 - 36128208
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||| ||||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  36128333 aataagttcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 36128234  T
Q  112 atgacatatcattataaagtaatttt 137  Q
    || ||||||||  |||||||| ||||    
T  36128233 ataacatatcaacataaagtagtttt 36128208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 8916156 - 8915947
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||  |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  8916156 tcactttcacatttgttagacaaaataatttagttaatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 8916057  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||| ||||||| | |||| |||||              |||||||||| ||||||||||||  |||||||||||||||||||| |||||| |    
T  8916056 atcaacataaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgaga 8915957  T
Q  207 tcgggaaaac 216  Q
    ||| ||||||    
T  8915956 tcgagaaaac 8915947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 18106316 - 18106152
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||| ||||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| |||||  |||||||||||||||||||||    
T  18106316 aataagttcactttcacatttgttagacaaaatgatttaattgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataac 18106217  T
Q  112 atgacatatcattataaagtaattttctgcattcgggacaagttcggg-gtgtgtacctatatac 175  Q
    || |  |||||  ||||| ||||||| | |||| || ||| |||||||  || ||||||||||||    
T  18106216 ataatgtatcaacataaaataattttttacatttggaacaggttcgggtatgggtacctatatac 18106152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 10208649 - 10208518
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||| ||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  10208649 tcactttcacatttgtaagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 10208550  T
Q  119 atcattataaagtaattttctgcattcgggac 150  Q
    || |  ||||||||||||| | |||| |||||    
T  10208549 attaacataaagtaattttttacatttgggac 10208518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 24414351 - 24414147
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| || |||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  24414351 tcactttcacatttgttagacaaaattatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 24414252  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  |||||||| |||| | |||| |||||              |||||||||| ||||||||||||  |||||||||||||||||||| |||||| |    
T  24414251 atcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgaga 24414152  T
Q  207 tcggg 211  Q
    |||||    
T  24414151 tcggg 24414147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 30846815 - 30846933
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  30846815 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 30846914  T
Q  119 atcattataaagtaatttt 137  Q
    ||||  |||||||| ||||    
T  30846915 atcaacataaagtagtttt 30846933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 9632256 - 9632387
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  |||||||| ||| |||||||||| ||||    
T  9632256 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattataaaaaaaaataacataacat 9632355  T
Q  119 atcattataaagtaattttctgcattcgggac 150  Q
    ||||  |||||||| |||| | |||| |||||    
T  9632356 atcaacataaagtagttttttacatttgggac 9632387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 37319805 - 37319862
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatca 70  Q
    |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  37319805 aatatgttcattttaacatttgttagaccgattgatttagttgctactttaaatatca 37319862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 38342726 - 38342653
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||||||  |||| ||||| ||  ||||||||||||| ||||||||||||||||||||||    
T  38342726 ttgctcctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattat 38342653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 30846962 - 30847020
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| ||| || ||||||    
T  30846962 gttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggg 30847020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 30978806 - 30978879
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||||||  |||| ||||| ||  ||||||||||||| |||||||||||||||| |||||    
T  30978806 ttgctcctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatataattat 30978879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 36128179 - 36128116
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaac 216  Q
    |||||||||| |||||||||||| |||||||| |||||||||||| ||| || |||||| ||||    
T  36128179 gttcggggtgagtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaac 36128116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 37472821 - 37472774
Alignment:
Q  164 gtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  37472821 gtacctaaatacccgttacccgtcccatacccgtgttttgaaatcggg 37472774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 43371568 - 43371639
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaac 222  Q
    |||| |||||| |||| ||||| | ||||||||||||| |||||||||||| ||||| ||||||||||||||    
T  43371568 agtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaac 43371639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 3547182 - 3547244
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||||||| |||| |||||   ||||||||||||| |||||||||||||||||||| ||||    
T  3547182 gttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcggtaaaa 3547244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 25210397 - 25210455
Alignment:
Q  157 ggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||| |||| ||||| ||||||||||||||||||||||| |||| || |||||||||    
T  25210397 ggggtgggtacatatatcctcgttacccgtcccatacccgtgttttaaagtcgggaaaa 25210455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 26755633 - 26755707
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtt-tttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||||||  |||| |||||| ||  ||||||||||||| |||||||||| |||||||||||    
T  26755633 ttgctcctttaactatcaatgaaagttctttatatcatgacaattatcaaaccaaataacatggcatatcattat 26755707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 38342592 - 38342522
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaac 222  Q
    |||||||||| |||| ||||| | ||||||||||||| || ||||||||| ||||| ||||||||||||||    
T  38342592 gttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaac 38342522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 42576492 - 42576566
Alignment:
Q  52 attgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||||| ||||  ||  |||| ||||| ||  ||||||||||||| ||||||||||||||||||||||    
T  42576492 attgctcctttaactatccgtgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattat 42576566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 42798061 - 42797981
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaactcaaactcaaacccagtcaaaa 238  Q
    |||||||||| |||| ||||||| ||||||||||| ||||||||| |||||     |||||||  || ||||||||||||||||||    
T  42798061 gttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttg-----gggaaaatccatactcaaacccagtcaaaa 42797981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 45256839 - 45256912
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactca 225  Q
    |||||||||| |||| ||||||| | ||| ||||| ||||||||| |||||||||| ||||||||||| |||||    
T  45256839 gttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaatcggggaaaactcatactca 45256912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 12193894 - 12193838
Alignment:
Q  159 ggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||| ||| |||||||| | ||||||||||||||||||| || ||||||||||||||    
T  12193894 ggtgggtatctatatacccattacccgtcccatacccgtgttctgaaatcgggaaaa 12193838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 22900809 - 22900872
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||||||||||| |||  ||||  | |||||| |||||||||||||| |||||||||||||||||    
T  22900809 agttcggggtgggtatatataaccccgttactcgtcccatacccgtgttttgaaatcgggaaaa 22900872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 6027962 - 6027904
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| ||||||||||||  |||||||||| ||||||| | |||| ||||||||    
T  6027962 gttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaaatcggg 6027904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 9632402 - 9632460
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||||||  ||||||||||| | ||||||||||||||||||| ||| || ||||||    
T  9632402 gttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgagatcggg 9632460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 35248458 - 35248388
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcg-ggaaaactcaaac 222  Q
    |||||||||| |||||| ||| | | ||||||||||||||||||| ||||| ||||| ||||||| |||||    
T  35248458 gttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaaac 35248388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 4427805 - 4427878
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||||  |||||||  |||| ||||| ||  | | ||||||||| ||||||||||||||||||||||    
T  4427805 ttgctcctttaaccatcaatgaaagttcttatatcatgatagttatcaaaccaaataacatgacatatcattat 4427878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 6164686 - 6164613
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||||||  ||||  |||| ||  ||||||||||||  |||||||||| |||||||||||    
T  6164686 ttgctcctttaactatcaatgaaagttcatatatcatgacaattatcaaatcaaataacatggcatatcattat 6164613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 14331543 - 14331628
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaat-cgggaaaactcaaactcaaacccagtcaaa 237  Q
    |||||| ||| |||| ||||| | |||||||||||||||||| ||||||| ||||  |||||||| || || |||||| |||||||    
T  14331543 gttcggagtgggtacatatatccccgttacccgtcccatacctgtatttttaaataggggaaaacccatacccaaacctagtcaaa 14331628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 15546785 - 15546818
Alignment:
Q  178 gttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||||||||||||| |||||||||||||    
T  15546785 gttacccgtcccatacccgtgttttgaaatcggg 15546818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 24051824 - 24051751
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||||||  |||| ||||| ||  |||| |||||||| |||||| ||| |||||||||||    
T  24051824 ttgctcctttaactatcaatgaaagttcttatatcatcacaactatcaaaccaaataatatggcatatcattat 24051751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 13830752 - 13830807
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcg 209  Q
    |||||||||| |||| ||||||| ||||||| ||||||||||||| |||||| ||||    
T  13830752 gttcggggtgggtacttatatacccgttacc-gtcccatacccgtgttttgagatcg 13830807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 14540811 - 14540855
Alignment:
Q  167 cctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||||| ||||||| ||| ||||||||| |||||||||||||    
T  14540811 cctatatacccgttacctgtctcatacccgtgttttgaaatcggg 14540855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 1012480 - 1012712
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  1012480 aatatgttcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatggtactttttataacacagcaattatcaaacaaaataaca 1012579  T
Q  113 tgacatatcattataaagtaattttct--gcattcgggacaagtt------------cggggtgtgtacctatatactcgttacccgtcccatacccgta 198  Q
    || |||||||  |||||||| |||| |  ||||||||||| ||||            ||||||| |||||||||||| | ||||||||||||||| | |     
T  1012580 tggcatatcaacataaagtagttttttttgcattcgggacgagtttgggtatgggttcggggtgggtacctatatacccattacccgtcccatactcatg 1012679  T
Q  199 ttttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    |||| ||||| |||||||| |||||||| |||||    
T  1012680 tttt-aaatcggggaaaacccaaactcataccca 1012712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 24568802 - 24568938
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||     
T  24568802 aatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaataac- 24568900  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||  |||||||| |||||| ||||||||||    
T  24568901 tgacatatcaacataaagtagttttctccattcgggac 24568938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 43113845 - 43113637
Alignment:
Q  19 ttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||||||||||| ||||    
T  43113845 ttcactttaacatttgttataccgattgatttagttgctccttcaaatatcaatgatagtttttataacacgacaattatctaacaaaataacataacat 43113746  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  || ||||| ||||||||||||| |||             ||||||||||| ||||||||||||  |||||||||||||| ||||| ||||||||    
T  43113745 atcaacatgaagtagttttctgcattcgagacggatttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaa 43113646  T
Q  207 tcgggaaaa 215  Q
    |||||||||    
T  43113645 tcgggaaaa 43113637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 34139310 - 34139448
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34139310 aatatgttcactttaacatttgttagaccgattgatttgtttactcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaaataaca 34139409  T
Q  113 tgacatatcattataaagtaa-ttttctgcattcgggac 150  Q
    ||   |||||  ||||||||| |||| ||||||||||||    
T  34139410 tggtctatcaacataaagtaatttttttgcattcgggac 34139448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 35215367 - 35215474
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  35215367 aatatgttcactttaacatttgttagaccgattgatttagttgctccattaaatatcaagggtagtttttataacacgacaattatcaaacaaaataaca 35215466  T
Q  113 tgacatat 120  Q
    || |||||    
T  35215467 tggcatat 35215474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 17469118 - 17469328
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||||||||||||| |||| ||||||| ||||||||| || |||||||||||||||||||||| ||||||||||   |||||||||||||||||||||    
T  17469118 aatatgttcactttaaaattttttagacccattgatttagtttctcctttaaatatcaatggtagcttttataacaaggcaattatcaaacaaaataaca 17469217  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtatt 200  Q
    || |||||||  |||||||| ||||||||| | |||||              ||| |||||| |||||||||||| ||||||||||||||||||||| ||    
T  17469218 tggcatatcaacataaagtagttttctgcagttgggacgggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtt 17469317  T
Q  201 ttgaaatcggg 211  Q
    |||||||||||    
T  17469318 ttgaaatcggg 17469328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 20 - 231
Target Start/End: Original strand, 20399461 - 20399686
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattat-caaacaaaataacatgacat 118  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||||||||| ||||||||  ||| |||||||||||  ||    
T  20399461 tcactttaacatttgttagaccgattgatttggttggtcctttaaatatcaatgctagtttttataacacgacaattatataaaaaaaataacatggtat 20399560  T
Q  119 atcattataaagtaattttctgcattcgggac---------aa---gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||| ||||||| ||||||||||||         ||   |||||||||| ||| |||||||| ||||||||||||||||||||| ||||||||    
T  20399561 atcaacataaaataattttttgcattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaa 20399660  T
Q  207 tcgg-gaaaactcaaactcaaaccca 231  Q
    |||| |||||| ||||| || |||||    
T  20399661 tcggagaaaacccaaacccataccca 20399686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 45235927 - 45236147
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||  | |||||||||||||||||||    
T  45235927 aatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaaaataac 45236026  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    || ||||||||  ||||| ||||||| | |||| |||||              |||||||||| |||||||||||| | ||||||||||||||||||| |    
T  45236027 ataacatatcaacataaattaattttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgt 45236126  T
Q  200 tttgaaatc-gggaaaactca 219  Q
    ||||||||| |||||||||||    
T  45236127 tttgaaatcagggaaaactca 45236147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 24870242 - 24870030
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacata 119  Q
    ||||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||||  |||||  |||||||||||||||| ||||||||||||    
T  24870242 tcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagttttattaacatgacaattatcaaacaaattaacatgacata 24870143  T
Q  120 tcattataaagtaattttctgcattcgggacaagt------------tcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaat 207  Q
    |||  ||||||||||||| | |||| |||||  ||            |||||||| |||||||||||| ||||||||||| ||||||||| |||| ||||    
T  24870142 tcaacataaagtaattttttacatttgggacgggtttaggtatgggctcggggtgggtacctatatacccgttacccgtcacatacccgtgttttaaaat 24870043  T
Q  208 c-gggaaaactca 219  Q
    | |||||||||||    
T  24870042 cggggaaaactca 24870030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 27932282 - 27932486
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    |||||||||||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||    
T  27932282 tcactttaacatttgttagacgtaatgatttaattgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgacat 27932381  T
Q  119 atcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaa 206  Q
    ||||  ||||| ||||||| | |||| |||||              |||||||||| |||||||||||| |||||| |||||||||||||| ||||||||    
T  27932382 atcaacataaaataattttttacatttgggacggatatgagtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaa 27932481  T
Q  207 tcggg 211  Q
    |||||    
T  27932482 tcggg 27932486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 29109048 - 29108833
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||||||||||||  | ||||||||||| ||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||     
T  29109048 aatatgctcactttaacatttgttagacgtaatgatttaattgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataat 29108949  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac------------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    |||||||||||  ||||||||||||| | |||| |||||              |||||||||| |||| ||||||| ||||||||||||||||||| | |    
T  29108948 atgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgt 29108849  T
Q  200 tttgaaatcgggaaaa 215  Q
    ||| ||||||||||||    
T  29108848 tttaaaatcgggaaaa 29108833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 121 - 231
Target Start/End: Original strand, 35215519 - 35215629
Alignment:
Q  121 cattataaagtaattttctgcattcgggacaagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaactcaa 220  Q
    |||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||    
T  35215519 cattataaagtaattttctgcattcgggacgagtttggggtgggtacctatatactcgttacccgtctcatacccgtgttttgaaatcgggaaaacccaa 35215618  T
Q  221 actcaaaccca 231  Q
    | ||| |||||    
T  35215619 aatcataccca 35215629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 17220579 - 17220785
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||| |||||||||||||||||||||  | ||||||||||| ||||| ||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  17220579 aatatgctcactttaacatttgttagacgtaatgatttaattgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 17220678  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac-------aagttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttga 204  Q
    |||||||||||  |||||||||| || | |||| |||||         |||||||||| |||||||||||  | | | || |||||||||||| ||||||    
T  17220679 atgacatatcaacataaagtaatcttttacatttgggacgggtatggggttcggggtgggtacctatataaccatcatccatcccatacccgtgttttga 17220778  T
Q  205 aatcggg 211  Q
    |||||||    
T  17220779 aatcggg 17220785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 215
Target Start/End: Original strand, 1063369 - 1063584
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataac 111  Q
    |||| ||||||||||||||||||||||| || ||||||| ||| || ||||||||||||||||| ||||||| ||||  |||||||||||||||||||||    
T  1063369 aatacgttcactttaacatttgttagacggaatgatttagttgatcgtttaaatatcaatggtaatttttatcaacatgacaattatcaaacaaaataac 1063468  T
Q  112 atgacatatcattataaagtaattttctgca------------ttcgggacaagttcggggtgtgtacctatatactcgttacccgtcccatacccgtat 199  Q
    | |||||||||  ||||||||||||| | ||            || || |  ||||||||||| |||| ||||||| ||||| ||||||||||||||| |    
T  1063469 aagacatatcaacataaagtaattttttacacttgggatggatttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgt 1063568  T
Q  200 tttgaaatcgggaaaa 215  Q
    ||||||||||||||||    
T  1063569 tttgaaatcgggaaaa 1063584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 36132141 - 36132005
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| ||| ||||||||||||| |||||||| ||||||||||| |||||||| | ||||||| ||||||||||||  |||||||||||||||||||||    
T  36132141 aatatgctcattttaacatttgtttgaccgattaatttaattgcttctttaaattttaatggtaatttttataacacggcaattatcaaacaaaataaca 36132042  T
Q  113 tgacatatcattataaagtaattttctgcattcgggac 150  Q
    |||||||| |  ||||| ||| ||||||||||||||||    
T  36132041 tgacatat-aacataaaataactttctgcattcgggac 36132005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 4230938 - 4230745
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||| |  |    
T  4230938 tcacttttacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataatgt 4230839  T
Q  119 atcattataaagtaattttctgcattcgggacaagttcggg-gtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||  ||||||||||||| | |||| |||||  ||| |||  || |||||||||||| |||||| ||||||||||| || |||||| ||||||    
T  4230838 atcaacataaagtaattttttacatttgggacgggtttgggtatgggtacctatatacccgttactcgtcccatacctgtgttttgagatcggg 4230745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 2076053 - 2075922
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  2076053 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 2075954  T
Q  119 atcattataaagtaattttctgcattcgggac 150  Q
    ||||  ||||||||||||| | |||| |||||    
T  2075953 atcaacataaagtaattttttacatttgggac 2075922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 39445793 - 39445685
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat-aacacaacaattatcaaacaaaataac 111  Q
    |||||| ||||||||||||||||||||| || ||||||||||| || || |||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  39445793 aatatgctcactttaacatttgttagacggaatgatttaattgatcatt-aaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 39445695  T
Q  112 atgacatatc 121  Q
    ||||||||||    
T  39445694 atgacatatc 39445685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 29089573 - 29089672
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||||| ||||||| |||||||||||| ||| ||||| ||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  29089573 aatatgtttactttaa-atttgttagacccattaatttagttgctcctttaaatatcaatgatagttttaataacacaataattatcaaacaaaataaca 29089671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 34021338 - 34021476
Alignment:
Q  10 aataatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaata 109  Q
    ||||||||| ||||||||||||||||||||   ||||||||  |||||||||||||||||||| ||||||||||||  |  |||||||||||||||||||    
T  34021338 aataatatgctcactttaacatttgttagattaattgatttcgttgctcctttaaatatcaatagtagtttttatataatgacaattatcaaacaaaata 34021437  T
Q  110 acatgacatatcattataaagtaattttctgcattcgggac 150  Q
    |||| ||||||||  ||||| | ||||||||||||| ||||    
T  34021438 acat-acatatcaacataaa-tgattttctgcattcaggac 34021476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 28977340 - 28977202
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||| ||||||||| |||||||||||||  | | ||||| ||| || |||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  28977340 aataagttcactttcacatttgttagacaaaattatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 28977241  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    || ||||||||  |||||||| |||| | |||| |||||    
T  28977240 ataacatatcaacataaagtagttttttacatttgggac 28977202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 32302929 - 32303032
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacat 118  Q
    ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  32302929 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 32303028  T
Q  119 atca 122  Q
    ||||    
T  32303029 atca 32303032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 34776945 - 34777053
Alignment:
Q  30 atttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacatatcattataa 128  Q
    |||||||||||  | ||||||| ||| ||||||||||||||||||||||||||| |||||   |||||||||||||||||||||| ||||||||  ||||    
T  34776945 atttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaacataa 34777044  T
Q  129 agtaatttt 137  Q
    | |||||||    
T  34777045 aataatttt 34777053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 215
Target Start/End: Original strand, 14186205 - 14186397
Alignment:
Q  31 tttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattataaag 130  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||||||    ||||| ||  |||||||||||||||||||| ||||| |  |||||     
T  14186205 tttgttagaccaattgatttagttactcctttaaatatcaatggtagttt----aacacgactgttatcaaacaaaataacatggcatattaacataaat 14186300  T
Q  131 taattttctgcattcgggacaagttcggg------------gtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||||||||| ||||| ||||  ||| |||            ||| |||||||||||  |||||||| |||||||||||| ||||||||||| |||||    
T  14186301 taattttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgagaaaa 14186397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 24927819 - 24927949
Alignment:
Q  21 cactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataacatgacata 119  Q
    |||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||| |||||    
T  24927819 cactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatcaaacaaaataacataacata 24927918  T
Q  120 tcattataaagtaattttctgcattcgggac 150  Q
    ||   |||||||| |||| | |||| |||||    
T  24927919 tccacataaagtagttttttacatttgggac 24927949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 11255230 - 11255096
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||||||||||||||||||||| || ||||||| ||| ||||||||||    | ||||||||||| ||| |  |||||||||||||||||||||    
T  11255230 aatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaat---gacggtagtttttattaatatgacaattatcaaacaaaataac 11255134  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    || ||||||||  | ||||||||||| | |||| |||||    
T  11255133 at-acatatcaacacaaagtaattttttacatttgggac 11255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 40248566 - 40248502
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat 84  Q
    ||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||||    
T  40248566 tcactttaacatttgttagactgaatgatttagttgatcctttaaatatcaatggtagtttttat 40248502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 37961036 - 37960956
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||| |||| ||||| |||||||| |||||||| |||||    
T  37961036 agttcggggtgtgtacctatatacctgttacctgtcccatacccgtgtttttaaatcggggaaaacccaaactcataccca 37960956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 39445650 - 39445587
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||||||||||| ||||||||| || ||||||| ||||||||||||| |||||||||||||||||    
T  39445650 agttcggggtgggtacctataaacccgttacctgtcccatacccgtgttttgaaatcgggaaaa 39445587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 4594343 - 4594270
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||||||  |||| ||||| ||  ||||||||||||| ||||||||||||||||||||||    
T  4594343 ttgctcctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattat 4594270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 32303076 - 32303134
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| ||| || ||||||    
T  32303076 gttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggg 32303134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 2075873 - 2075915
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccataccc 195  Q
    |||||||||| |||||||||||| |||||||||||||||||||    
T  2075873 gttcggggtgggtacctatatacccgttacccgtcccataccc 2075915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 11255070 - 11254996
Alignment:
Q  164 gtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaactcaaactcaaacccagtcaaaa 238  Q
    ||||||||||||  |||| ||||||||||||||| ||| |||| ||||||||| || || |||||| ||||||||    
T  11255070 gtacctatatacctgttatccgtcccatacccgtgtttggaaagcgggaaaacccatacccaaacctagtcaaaa 11254996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 30481494 - 30481432
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||||||| |||||||||| ||| |||| |||| ||||| |||||||||||||| ||||||    
T  30481494 gttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcaggaaaa 30481432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 40248444 - 40248386
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||| || |||||||||||| ||||| ||||| ||||||||| |||||||||||||    
T  40248444 gttcgggatgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcggg 40248386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 15173927 - 15173874
Alignment:
Q  179 ttacccgtcccatacccgtattttgaaatcggg-aaaactcaaactcaaaccca 231  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||| || |||||    
T  15173927 ttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaacacataccca 15173874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 24927964 - 24928008
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgt 197  Q
    |||||||||| |||||||||||| ||||||||||| |||||||||    
T  24927964 gttcggggtgggtacctatatacccgttacccgtctcatacccgt 24928008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 31325134 - 31325197
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat 84  Q
    ||||||| |||||||||||||  | ||||||| ||| || |||||||||||||||||||||||||    
T  31325134 tcactttcacatttgttagacaaaatgatttagttgatc-tttaaatatcaatggtagtttttat 31325197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 5858706 - 5858663
Alignment:
Q  172 atactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||    
T  5858706 atacccgttacccgtcccatacccgtgtttttaaatcgggaaaa 5858663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 8545422 - 8545351
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgg-gaaaactcaaact 223  Q
    |||||||||| ||| |||||| | |||||| ||| |||||||||| |||||||||||| |||||| ||||||    
T  8545422 gttcggggtgggtatctatatccccgttactcgttccatacccgtgttttgaaatcggagaaaacccaaact 8545351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 2190016 - 2189982
Alignment:
Q  92 caattatcaaacaaaataacatgacatatcattat 126  Q
    |||||||||||| ||||||||||||||||||||||    
T  2190016 caattatcaaaccaaataacatgacatatcattat 2189982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 8031023 - 8031093
Alignment:
Q  56 ctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||| || |||||  | || ||||| || |||||||||||||| |||||||||| |||||||||||    
T  8031023 ctcctttaattaccaatgaaatttcttatatcataacaattatcaaaccaaataacatggcatatcattat 8031093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 9642400 - 9642366
Alignment:
Q  177 cgttacccgtcccatacccgtattttgaaatcggg 211  Q
    ||||||||||||||||||||| |||||||||||||    
T  9642400 cgttacccgtcccatacccgtgttttgaaatcggg 9642366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 17084181 - 17084095
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgg-gaaaactcaaactcaaacccagtcaaa 237  Q
    ||||||||||| ||| |||||| | ||||||||||| | ||||||| |||| ||||||| |||||| ||||   |||||||||||||    
T  17084181 agttcggggtgggtatctatatccccgttacccgtctcgtacccgtgttttaaaatcggagaaaacccaaatcaaaacccagtcaaa 17084095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 24568953 - 24569015
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||||||||||  ||||||||||| || |||| ||||||||||| | || ||||||||||||||    
T  24568953 gttcggggtggatacctatatacccgctacctgtcccatacccatgttgtgaaatcgggaaaa 24569015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 27056604 - 27056566
Alignment:
Q  177 cgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  27056604 cgttacccgtcccatacctgtactttgaaatcgggaaaa 27056566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 34021495 - 34021564
Alignment:
Q  157 ggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcg-ggaaaactcaaactca 225  Q
    ||||||||||||||||| |  ||||| ||| ||||| ||||||||| |||||| |||||||| |||||||    
T  34021495 ggggtgtgtacctatattcctgttactcgttccatatccgtattttaaaatcgtggaaaacttaaactca 34021564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 40789469 - 40789542
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||||||||||  |||||||  |||| ||||| ||  | | ||||||||| ||||||||||||||||||||||    
T  40789469 ttgctcctttaaccatcaatgaaagttcttatatcatgatagttatcaaaccaaataacatgacatatcattat 40789542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 238
Target Start/End: Original strand, 90467 - 90698
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacata 119  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||| ||||||||||||||| ||||    
T  90467 tcactttaatatttgttagaccgattgatttatttgctcctttaaatatcaatggttgttttaataacacatcaattattaaacaaaataacatggcata 90566  T
Q  120 tcattataaagtaattttctgcattcgggacaa------------gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaat 207  Q
    |||  ||||| ||||||||||||||| |||| |            |||||||| | ||||| |||||| ||||| ||||| ||||||||| |||||||||    
T  90567 tcaacataaaataattttctgcattcaggacgaatttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacccgtgttttgaaat 90666  T
Q  208 c-gggaaaactcaaactcaaacccagtcaaaa 238  Q
    | |||||||| || || |||||||||||||||    
T  90667 cggggaaaacccatacccaaacccagtcaaaa 90698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 197545 - 197415
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacata 119  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||| ||||    
T  197545 tcactttaatatttgttagaccgattgatttagttgctcctttaaatatcaatggtagtttttataacaaggtaattatcaaacaaaataacatggcata 197446  T
Q  120 tcattataaagtaattttctgcattcgggac 150  Q
    |||  ||||||||||||||||||||||||||    
T  197445 tcaacataaagtaattttctgcattcgggac 197415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 6269 - 6400
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| |||||||| ||| |||| |||||||||||||||||    
T  6269 aatatgttcactttaacatttgttagatcgattgatttagttgctcctttaaatttcaatggtaatttttatagcacgacaactatcaaacaaaataaca 6368  T
Q  113 tgacatatcattataaagtaattttctgcatt 144  Q
    || |||||||  ||||||||| ||||||||||    
T  6369 tggcatatcaacataaagtaactttctgcatt 6400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 14638 - 14780
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataaca 112  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |    
T  14638 aatatgctcactttaacatttgttaaaccgattgatttagttgctcctttaaatatcaatggtagtttttacaacacaataattatcaaacaaaataata 14737  T
Q  113 tgacatatcattataaagtaattttctgcattcgggacaagtt 155  Q
    |  |||||||  || || ||||||||| |||| ||||| ||||    
T  14738 tatcatatcaacattaaataattttctacatttgggacgagtt 14780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 36018 - 36154
Alignment:
Q  13 aatatgttcacttt-aacatttgttagaccgattgatttaattgct--cctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaata 109  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  36018 aatatgttcacttttaacatttgttagaccgattgatttagttgctttcctttaaatatcaatggtagtttttataacacgacagttatcaaacaaaata 36117  T
Q  110 acatgacatatcattataaagtaattttctgcattcgggac 150  Q
    ||||||||||| |    |  |||||||||||||||||||||    
T  36118 acatgacatatta----atggtaattttctgcattcgggac 36154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 4119 - 4244
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||||||||||||||||||||  || ||||||| ||||||||||||||||||||| ||||||||| |||||  |||||||||||||||||||||    
T  4119 aatatgttcactttaacatttgttagatggaatgatttagttgctcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataac 4218  T
Q  112 atgacatatcattataaagtaatttt 137  Q
    |||||||||||  |||||||| ||||    
T  4219 atgacatatcaacataaagtattttt 4244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 4290 - 4335
Alignment:
Q  170 atatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||||||||||| ||| ||||||||| ||||||||||| |||||    
T  4290 atatactcgttaccagtctcatacccgtgttttgaaatcgagaaaa 4335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 33446 - 33581
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaa-ca---aaat 108  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||| ||   ||||    
T  33446 aatatgttcactttaatatttgttacaccgactgatttaattgcttctttaaatatcaatggtagtttttataacacgaaaattatcaaatcaaataaat 33545  T
Q  109 aacatgacatatcattataaagtaattttctgcatt 144  Q
    |||||| |||||||| |||||||| |||||||||||    
T  33546 aacatggcatatcatcataaagtagttttctgcatt 33581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 14370 - 14295
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataaca 88  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14370 aatatgttcactttaacatttgttagaccgattgatttaattgttcctttaaatatcaatggtagtttttataaca 14295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 10163 - 10297
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagttttta-taacacaacaattatcaaacaaaataac 111  Q
    |||||||||||||||||||||||||||| || ||||||| ||| ||||||||||    | ||||||||||| ||| |  |||||||||||||||||||||    
T  10163 aatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaat---gacggtagtttttattaatatgacaattatcaaacaaaataac 10259  T
Q  112 atgacatatcattataaagtaattttctgcattcgggac 150  Q
    || ||||||||  | ||||||||||| | |||| |||||    
T  10260 at-acatatcaacacaaagtaattttttacatttgggac 10297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 10319 - 10397
Alignment:
Q  160 gtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaactcaaactcaaacccagtcaaaa 238  Q
    ||| ||||||||||||  |||| ||||||||||||||| ||| |||| ||||||||| || || |||||| ||||||||    
T  10319 gtgggtacctatatacctgttatccgtcccatacccgtgtttggaaagcgggaaaacccatacccaaacctagtcaaaa 10397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0902 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0902
Description:

Target: scaffold0902; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 747 - 836
Alignment:
Q  12 taatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaa 101  Q
    ||||||||||||| |||||||| || || ||| ||||||  ||||| ||||||||||||||||||| ||||||||||  |||| ||||||    
T  747 taatatgttcactataacatttctttgatcgaatgatttggttgctactttaaatatcaatggtaggttttataacatgacaaatatcaa 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 16981 - 17044
Alignment:
Q  152 agttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    ||||||||||| |||| ||||| | ||| ||||||||||||| |||||||||||||||||||||    
T  16981 agttcggggtgggtacatatatccccgtcacccgtcccatacacgtattttgaaatcgggaaaa 17044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 32755 - 32685
Alignment:
Q  13 aatatgttcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatggtagtttttat 84  Q
    |||||| ||||||||||||||||||||| || ||||||||||| | | |||||||||| |||||||||||||    
T  32755 aatatgctcactttaacatttgttagacggaatgatttaattgat-cattaaatatcactggtagtttttat 32685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 70114 - 70172
Alignment:
Q  157 ggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaa 215  Q
    |||||| |||| ||||| ||||||||||||||| |||||||||| ||||||| ||||||    
T  70114 ggggtgggtacatatatcctcgttacccgtcccgtacccgtattatgaaatcaggaaaa 70172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 2984 - 3063
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatc-gggaaaactcaaactcaaaccca 231  Q
    |||||||||| |||| ||||| |  |||| ||||||  |||||||||||||||||| |||||||| |||||||| |||||    
T  2984 gttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactcataccca 3063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 211379 - 211458
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgg-gaaaactcaaactcaaaccca 231  Q
    |||||||||| |||| ||||| |  |||||||||| | |||||||||||||||||||| |||||| ||||| || |||||    
T  211379 gttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccataccca 211458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1630 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 1492 - 1545
Alignment:
Q  20 tcactttaacatttgttagaccgattgatttaattgctcctttaaatatcaatg 73  Q
    ||||||| |||||||||||||  | ||||||| ||| |||||||||||||||||    
T  1492 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatg 1545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 56105 - 56032
Alignment:
Q  53 ttgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatgacatatcattat 126  Q
    ||||| |||||  ||||||||  |||||||||| ||  ||||||||||||| ||||||||||  ||||||||||    
T  56105 ttgcttctttacctatcaatgaaagtttttatatcaggacaattatcaaaccaaataacatggaatatcattat 56032  T

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Target: scaffold0244 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 4654 - 4582
Alignment:
Q  153 gttcggggtgtgtacctatatactcgttacccgtcccatacccgtattttgaaatcgggaaaactcaaactca 225  Q
    ||||| |||| ||| |||||| |  |||||| ||||||||||||||||||||||| ||| |||  ||||||||    
T  4654 gttcgtggtgggtagctatatccctgttacctgtcccatacccgtattttgaaattggggaaaaccaaactca 4582  T

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