View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1343_high_142 (Length: 214)
Name: NF1343_high_142
Description: NF1343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1343_high_142 |
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Alignment Details
Target: chr1 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 10011368 - 10011542
Alignment:
| Q |
11 |
caccacagagcttggatttggacaacaaagaggggtgttcatcttttgcagaaaaaataagaaatcctcggtgatcattgaatcgatccaaaacatgtcg |
110 |
Q |
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| T |
10011368 |
caccacagagcttggatttggacaacaaagaggggtgttcatcttttgcagaaaaaataagaaatcctcggtgatcattgaatcgatccaaaacatgtcg |
10011467 |
T |
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| Q |
111 |
taaatttcgttgttgaagaaggttgatgaaggattctggcggagaacatgcagctatggagatggcgttgaagagttggatggat |
195 |
Q |
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| T |
10011468 |
taaatttcgtt----------gttgatgaaagattctggcggagaacatgcagctatggagatggcattgaagagttggatggat |
10011542 |
T |
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